Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004721

Physical Location & Seq

Genomic Coordinates Reverse (-)

16342728 .. 16353898

Gene Structure 11171 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G40820.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 8109 bp

ATGGCGAAGGACGACAATAATCTGTCGAGCTTGGTTCACGAACTTCGTGAACGGGTGGCCGCATCCGCCTCCACTCCGGCTAACAACCTCCGTCACTCTTCCGGAGACGAAGATGCTCTAGAGATTCGATTTCGTGCTGTCATCCCTAATCTATTGAATACCTACGTTGTTCCTTCTCTCGGCAACGGGAGGGAAGTTACAGCTGTTCTGAAGCTTGTTGGTCACACAGCAAGGAACATTCCAGGAGTCTTCTATCACGGAACCCCTTCTGCTATCCTCCCTGTGATTGCTCGTATTATTCCCTTCTTTGCTGAACCAGAATTTGTTCCTGGGCATGGAGTATTACTTGAAACTGTTGGCTCTCTCTTAATGTTGCTGCGTTCCAACTCAAGGAAGGCATACCGGATCTTCTTCCATGACGCTTTGCAGGCAATTCAAGATATGCAACCTATTGCATCACTGCACTCAATTGAACCGGAAGTTTGTGAATCTCACATTCCATTTAGGTGTTTCTGTATGTCCTTTTCTGGAATTGGGGGTGATCTGCCAGATGCTAATAAGCCCAGAGATGGTGATGGTCTTGTGTTGAACTTATTGGGAGCCAACCGATGGCAACCTTTTGCTACTTGTATTCTTAAACTCATCTGTAAATGCCTAACTGAGGGGACACTCTACGTCCAGGGTCTCATCCATACATCATTTTTTAAGGCGGCTTGTTCTCTAGTATGCTGTGGTGGCGCAGATGTGCAGATGGCATGCTTTGAATTTGCTACTCTTGTCGGATCAATCCTTACATTCAACATCCTCCCGCATGTGGCCTTAATACAGTCAATCATCCTCCTTTTAAGTGCAGATGAAGGACTTCCTGTGTACAGGAATACGATTTATGATTCTACCATTGGACGTTTCCTTACGGCAGTATATTCCAGCTGTTCTGATGCCGCTGTCAAACTAACTGCAGAAAGTTTAGTGTTGGTTCTCTCTCATGCTTTACAGAGAACAAAAAGTGAGGAGCTTAAGGCTTCCCTCTGCAGTGCATATGTGCGGATTGTGAAATCTTGTCCTCCTTGTATATGGAAGATACACTGCCTTCTAGAGTTGCTTCATCTTCCAGAACCTTGTTTTCAGTTGATAGAATGTTTTAAAGCAGTTCTTATAGTTCTTGGACCTGGGTGTGTTCGAGTTGAGACAACCAAATGTGGTAGTCATACATCAGCAACAAGTGATAGACCTGTCCAGGGAATTAACGCTGGAAAAAAAAGGCATATTGAGGATGAAAGTACATACAAAAGAAAGCGCCAGAAGGTTGGTGATGATATTCGACGAGGGGTTTACTTTGCTCCTGAATTTGCCGATGAGACTGATGGAAAAGATGCTGCTAGTCTGCGTGAGATGCTTATTTCAACTGTAGAATCTTTAAAGCCTCCACCTGCTGGACCTAGTCTGTCACAGACTGAAAGTTCAATAGTGGCACTTAGCATGCTCACCAATGCATTTTGTTTCTGTCCCTGGACTGACATGACTCATCGATTGTTTAACCAGATGTATGCCTGGATTCCCTGGATAGCTGGGCAGGTTGAGGAAACAAATCCTATCATGTTCGATATTTCCATTTACTTGGAAGGAATTCACAATCTGCTGCTCGTTGGTGTGGATCCACAGTATGAATATACAAGTAAAGGGAATGATCTGGTTGCCATACAATTCTTGCTGAAGCTTCCTTGGACGCACTACATGCTGTTTAAGACGCCTAGCTCTCTAGTAAAGTCTAAGTGTTTATCTGTAGGGATATGGACAAAGCTTGGTTTACAAGACGGGAGTGATTTTGATATCTTCAGTTGGTCTCTTTCTGATGATTTTGAACAAGTGCAAGCTGTCGCTGCTATCTCTATGCCACTCAAAGTTCTTTTCTCTGGTCTTGGTGCCCTTCTTCATATGTTCCCCAAGCTGGAGCATTTGTTGGAAGAAAAGGAATTGATGATTAAGAAGGCCATTCCTCAGTCACTTGGCTTCTTATCTTGTCTTTATGGATCAAGTACTACTGACTCAGAGAAAACTGCATGCCATTTACTCCTACATGAAGATTTAAAGAAAGATGAGACTCTGAATTCTCTACTTCAAGGGTTCCGATGTTCAAAGTGTGATAAATTTATCGAACGCGAAGATGAAAAGCATTTCAGAATCATAGAGACTCCAGAGATGGTGAAATTGAAGATGGATCATCATCGTGATTACTTTAACCTTCAATCTTTATATTTTAATCTTCTCTATGATGAGTCTTCTGAAGAGACTCAGCTAGCCTGCGTAGAAGTAATAAGGAGAATTCTTGGCCACACATCCCCAGATATTCTGGTAAGAACAAGGTCTCAATGGATCAGGTGCCTTCAATATCTATTAGTTCATGTAAATACAGACGTAAGGGAAGCATTCTGTGCTCAGATTGGTATCTTCGTACAGCATCCTATTGTGAGCTGTTTGTTTCTTAGTGAAGATGCTACGGAGAAAAGTTGCGAAAGAAATTTTTTTAATTTGATTGAGCATTCTCTAGCAGCAGCTAAGGATCTTCTTGTTATCCAGACTCTATTGGAAACGACAGCTGAAGTTATGGTAGCTGTTGATGTTACCAGTGAGCTTTTCTTGATTTGTCTTTTCCTGCTGATTGATCAGCTTGATCATCCAAACTTGATCGTCCGAATAAATGCGTCAAAGTTAATAAATCGGTCATGCTACATCCACGTGAAAGGGGGATTTGCAACTCTACTTTCCACAGCCTCTCATATTCAAAATGAGTTGTTTGATAATCTATCTGTCAGGCTGACCAGCCGTCCAAATGTGGTAAGAGAATTTGCAGAAGCTGTTTTGGGTGTTGAAACTGAAGAACTTGTGAGGAAAATGGTCCCTGCTGTTCTTCCTAAGCTCTTGGTGTATTGGCAGGAAAATGCTCAAGCAGCCAATACCTTGAACGAACTGGCCAAGTTAATAGACACAGATGTGGTACCTCTAATAGTAAATTGGCTACCCAGAGTTCTTGCATTTGCTCTGAATCAAGAAGAGGACAAGAATTTGCTCTCAGTTTTGCAATTGTATCACTCACAGATTGGTTCTGACAACCAAGAAATTTTTGCTGCTGCATTACCTGCACTCTTAGATGAGCTTGTATGCTTTGTGGACATTGCTGATACACCTGAGACAGATAGACGGCTACAGAGACTGCCTGATGCAATAAAGAAGATCTCAAAAGTTTTAACAAATGCCGAGGATCTTCCTGGATTCTTACAAAACCATTTTGTTGGACTCCTTAACAGTATTGACAGAAAAATGCTTCATGCAGATGACATTTTTCTTCAAAAACAAGCACTGAAGCGTATTAAACTGCTCATTGAGATGATGGGCCATTATCTCAGCACATATGTTCCTAAGCTTATGGTTCTCCTTATGCATGCCATTGAAAAAGATGCACTTCAGAGCGAGGGTCTCTTGGTCTTGCATTTTTTTACAAGAAAGTTGGCTGATGTATCGCCATCTAGCATAAAGTATGTGATTTCTCAGATTTTTGCGGCACTCATCCCCTTCTTAGAGAAAGAGAAGGAAGGTCCCCATGTATATTTAGATGAAGTGGTGAAAATTCTTGAAGAACTTGTTTTGAAGAATAGAGATATAGTAAAAGAGCATATTTGTGAGTTTCCCCTCTTACCTAGCATACCATCTTTAGGAGAATTAAACAATGCTATTCAAGAAGCACGTGGATTAATGAGCCTGAAGGATCAGTTGCGGGATATTGTAAATGGTATGAAACACGAGAACCTGAATGTTAGATACATGGTGGCATGTGAGCTAAGCAAATTGCTGTATAACAGAAATGAAGATGTTGCTGCACTGATTGCCGGTGAACTTGTCTCAGACATGGAGATCTTGAGCTCTTTAATCACATATTTACTACAGGGGTGTGCAGAAGAATCTCGAACTACAGTGGGCCAGAGGTTGAAGTTAGTCTGTGCAGATTGTCTTGGAGCAATAGGTGCTATTGACCCTGCCAAAGTGAGAGTTGCTTCATGCAGTCGTTTTAAAATCCAATGCTCAGATGATGATCTTATCTTTGAGCTCATTCACAAACACTTGGCAAGAGCTTTTAGAGCTGCACAGGATACAATAATACAAGACTCAGCTGCTCTTGCCATACAGGAACTACTAAAGATTGCTGGTTGTGAGCCATCATTAGCTGGGAATGTTGTTGTGTTGACCCCCCAGGAGCATGTACAAGTCAATGTATCTGGTTCTAGAAGATGTGGAGGTAACAATGAAGTGAAGGATAGGGGACAAAAACTATGGGATCGGTTCTCAAACTATGTTAAAGAACTAATAGCTCCCTGCTTGACTTCAAGGTTTCAGCTTCCAAATGTGTCTGACCCTGGATCAGCTGGACCAATTTATCGGCCTTCTATGTCATTCAGAAGGTGGCTATCCTACTGGATAAGGAAATTGACAGCATTTGCAACTGGATCCCGTGTAAGCATATTTGCTGCTTGCCGAGGCATAGTGCGTCACGATATGCAGACAGCTACTTATCTCTTACCATATTTAGTTCTGGATGTTGTTTGCCATGGGACTGAGGCAGCACGGCTTAGCATTTCTGAAGAGATCCTTTCTGTTCTTGATGCTGCTGCATCAGAAAATAGTGGAGTGACAATAAACAGTTTTGGTGTTGGTCAGAGTGAAGTTTGTGTTCAAGCTGTTTTCACGCTTCTTGATAACCTTGGGCAATGGGTTGACGATGTGAAGCAGGGAGTAGCACTCTCATCGTCTCTGCAGTCATCAGGTGGTAGGCAAGTAGCACCCAAATCGAAAGACCAGGTTTCAAACTCAACAACAGAACAGGATCATCTTCTTGTACAATGTAAATATGTGTTGGAACTTTTGCTAGCTATTCCCAAGGTGACCCTTGCTAGGGCATCTTTCAGGTGTCAAGCTTATGCCAGGTCATTGATGTACCTTGAATCCCATGTACGTGGAAAGTCAGGCTCCTTAAATCCCGCAGCTGAGAAGACCGGCATCTTTGAAAATGCTGATGTTTCTTCTCTGATGGGAATATACAGCTGCCTTGACGAGCCAGACGGTCTTTCGGGCTTTGCAAGTTTAAGCAAATCATTAAATTTGCAAGACCAGTTGTTGATAAACAAGAAATCTGGTAACTGGGCAGACGTTTTTACTGCATGTGAACAAGCCCTTCAGATGGAACCAACATCAGTTCAACGACATTCAGATGTTCTTAATTGTTTACTTAACATGTGCCACCATCAGACAATGGTCACTCATGTTGACGGACTAATTTCCAGAGTACCTGAGTACAAGAAAACGTGGTGCACACAAGGTGTACAAGCTGCATGGAGACTCGGAAAGTGGGACTTGATGGATGAGTATCTTGATGGAGCTGATGCAGAAGGTTTACTATTCAGTAGCTCAGACAGCAATGCCTCATTCGATAGAGATGTAGCAAAGATTCTCCATGCAATGATGAAGAAGGATCAATACTCTGTAGCTGAGGGAATAGCTATTTCCAAACAAGCTCTCATTGCTCCTCTAGCTGCAGCAGGCATGGACTCCTACACACGAGCTTATCCTTTTGTTGTCAAACTTCACTTGCTAAGAGAGCTAGAGGACTTCCAGGCGGTTCTTAATGGGGATTCATATTTGGAGAAATCATTTAGTACAAGTGATCAGGTGTTTTCGAAAGCAGTAGATAACTGGGAGAATCGGCTCAGATTTACTCAATCATCACTGTGGACAAGGGAACCTCTCTTAGCTTTCCGAAGACTCGTCTTTGGTGCCTCTGGTCTTGGTGCTCAAGTTGGGAACTGTTGGCTTCAATATGCAAAGCTTTGCCGTTTGGCTGGACACTATGAGACAGCTCACAGGGCAATTTTGGAAGCTCAGGCTTCTGGTGCACCTAATGTTCACATGGAAAAGGCGAAACTTCTTTGGATCACTAAGCGTTCAGACAGTGCAATTATAGAGCTACAACAATCTCTCCTGAATATGCCTGAGGGTGTTGTTGACTCCACTGTAATTTCTTCGATCAATAGCTTACTGATGGCTCCCCCAAATCCAGAGCCCACAGTTCGTAACACACAATCTTTCAAAGAAAAAAAAGATGTCGCAAAGACTCTTCTTTTGTATTCCAAATGGATCCATCACAGTGGGCAGAAACAAAAGAAAGATGTTTTAAATCTGTATACCCAAGTCAAGGAATTGCTGCCCTGGGAGAAGGGATATTTCCATTTGGCTAAGTATTATGATGAACTATATGTTGATGCAAGAAAGTGTCAACAAGAGAGCTCTGTATTTAGCTCTGCAGGCAGTAAAAAAGGATCTGTCTCGTCGAACTTAAGCACTGAGAAAGCAGGGTGGGATTACCTGTTTAAGGGAATGTACTTCTATGCTAAGGCACTTCACAGTGGACACAAGAATCTCTTTCAAGCACTTCCGAGGTTGTTAACACTGTGGTTTGACTTTGGTACTATCTATAAAACAAGTGGCTCAGCGGGAAATAAGGAATTGAAAAGTACTCATATGAAGATAATGAGTTTAATGAGGGGCTGCTTAAAGGATCTGCCAACCTATCAATGGTTAACTGTGTTGCCCCAGTTGGTTTCTCGAATCTGTCACCAGAATGCGGATACAGTACTAATGGTTAAAAATATCATCACTTCTGTTCTACATCAATTTCCTCAGCAAGGGCTCTGGATTATGGCAGCTGTTTCAAAATCTACTGTTCCTGCTAGAAGGGAAGCAGCTGCAGAAATCATACAAGGTGCACGAAAAGGTTTTAACCAAAGTGACAGAGGCCACAATTTGTTCATTCAGTTTGCTAGTTTGACTGATCATTTCATTAAACTATGCTTCCATGGAGGACAACCAAGATCCAAGGTTATCAATATAGCAACTGAATTCAGTGCCTTGAAAAGAATGATGCCGCTGGATATCATCATGCCAATTCAACAATCTCTTACCATTAGCCTACCAGCATTCCATATGAATAACAATGAACGACACTCTGCCAGTGTCTTTTCTGGTTCAGATCTACCAACTATTTCTGGTATAGCCGATGAAGCCGAGATACTTTCTTCCCTTCAGCGCCCAAAGAAGATCATTCTGCTGGGAAATGATGGTATTGAGTATCCATTCCTCTGCAAGCCCAAGGATGATCTCAGGAAAGATGCTCGGATGATGGAATTTACTGCGATGATAAACCGCTTACTATCCAAGTATCCCGAAAGCAGACGAAGGAAGCTATATATCCGCACCTTCGCAGTAGCTCCTCTGACTGAGGACTGTGGTCTGGTCGAGTGGGTTCCACATACACGTGGACTCCGCCATATTCTACAAGATATATACATTTCCTGTGGGAAGTTTGATCGGCAGAAAACAAATCCTCAAATTAAAAGAATATATGATCAATGTGCTGTTAAAAAGGAGTATGAGATGCTGAAGACCAAAATCCTCCCTATGTTCCCTCCGGTTTTCCATAAATGGTTCTTGACAACGTTTTCTGAACCAGCTGCTTGGTTTAGGTCACGTGTAGCTTATGCTCACACCACAGCAGTTTGGTCCATGGTTGGGCACATTGTTGGGCTTGGTGACCGTCATGGAGAAAATATTCTCTTTGATTCTACTTCGGGTGATTGTGTTCATGTAGACTTCAGTTGCTTATTTGACAAAGGCTTACAACTGGAGAAGCCTGAGTTGGTGCCATTCAGATTGACCCAGAACATGATTGATGGTTTGGGCATCACTGGATATGAGGGCATCTTCATGAGGGTATGTGAAATCACTCTCACAGTGTTGAGGACACATAGGGAGACGTTGATGAGCATCCTGGAGACATTCATCCATGATCCTCTTGTGGAGTGGACAAAGTCACACAAATCAAGCGGAGTAGAAGTTCAGAACCCACATGCTCAGCGGGCCATAAGCAGCATTGAAGCCCGGCTGCAGGGCGTGGTTGTTGGTGTTCCGCTACCGGTAGAAGGTCAGGCTCGCCGGTTGATTGCCGATGCAGTCTCACTTGAGAATCTTGGGAAGATGTACATCTGGTGGATGCCCTGGTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000723 GO:0000726 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005911 GO:0006139 GO:0006259 GO:0006278 GO:0006281 GO:0006282 GO:0006302 GO:0006303 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007004 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009506 GO:0009628 GO:0009987 GO:0010035 GO:0010038 GO:0010044 GO:0010212 GO:0010332 GO:0010833 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0022414 GO:0030054 GO:0031323 GO:0031347 GO:0032200 GO:0032204 GO:0032501 GO:0032504 GO:0033043 GO:0033044 GO:0033554 GO:0034641 GO:0034645 GO:0034654 GO:0042221 GO:0042592 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043247 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0046483 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051128 GO:0051171 GO:0051276 GO:0051321 GO:0051716 GO:0055044 GO:0060249 GO:0060255 GO:0065007 GO:0065008 GO:0071704 GO:0071840 GO:0071897 GO:0080090 GO:0080134 GO:0080135 GO:0090304 GO:1901360 GO:1901362 GO:1901576 GO:2001020

KEGG Pathways

Metabolic & Signaling

ko03460 ko04110 ko04115 ko04214 ko04218 ko05165 ko05166 map03460 map04110 map04115 map04214 map04218 map05165 map05166

Pfam Domains

Protein Families

FAT FATC PI3_PI4_kinase UME

Protein Analysis

2702

Amino Acids

302.36

Weight (kDa)

6.62

Isoelectric Point (pI)

43.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UME	PF08064	1092 - 1192	8.8e-18	UME (NUC010) domain
M-HEAT_ATR	PF25030	1476 - 1724	6.1e-33	Serine/threonine-protein kinase ATR, M-HEAT region
FAT	PF02259	1791 - 2166	8.1e-65	FAT domain
HEAT_ATR	PF23593	2192 - 2293	4e-33	Serine/threonine-protein kinase ATR-like, HEAT repeats
PI3_PI4_kinase	PF00454	2392 - 2638	3.8e-55	Phosphatidylinositol 3- and 4-kinase
FATC	PF02260	2672 - 2703	1.4e-12	FATC domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0004721)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G40820 AT5G40820 AT5G40820 AT5G40820
fragaria_vesca	FvH4_2g15770 FvH4_2g15770 FvH4_2g15770 FvH4_2g15770 FvH4_2g15770
malus_domestica	MD05G1126600.v1.1
prunus_persica	Prupe.8G170300_v2.0.a1 Prupe.8G170300_v2.0.a1 Prupe.8G170300_v2.0.a1 Prupe.8G170300_v2.0.a1 Prupe.8G170300_v2.0.a1 Prupe.8G170300_v2.0.a1 Prupe.8G170300_v2.0.a1 Prupe.8G170300_v2.0.a1
pyrus_communis	pycom05g12250 pycom10g11100 pycom10g11110
rosa_chinensis	RchiOBHm_Chr6g0279121
rosa_laevigata	RLG00000013166
rosa_multiflora	Rmu_sc0014203.1_g000022
rosa_roxburghii	Rroxscaffold_7G00189110
rosa_rugosa	Rorug06G0122400
rosa_samantha	Rh6AG231100 Rh6BG236000 Rh6CG238100 Rh6DG229700
rosa_wichuraiana	Rw6G020240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1438
Acc36I	ACCTGC	3 cut(s)	1438, 1564, 3145
Acc65I	GGTACC	1 cut(s)	2995
AccB1I	GGYRCC	5 cut(s)	1922, 2379, 2995, 5822, 7744
AccB7I	CCANNNNNTGG	2 cut(s)	609, 1433
AccI	GTMKAC	2 cut(s)	6230, 7692
AccII	CGCG	1 cut(s)	2160
AccIII	TCCGGA	1 cut(s)	101
AclI	AACGTT	1 cut(s)	7541
AcoI	YGGCCR	3 cut(s)	57, 2329, 2970
AcvI	CACGTG	4 cut(s)	2737, 3743, 7361, 7574
AcyI	GRCGYC	1 cut(s)	1748
AdeI	CACNNNGTG	1 cut(s)	5369
AflII	CTTAAG	2 cut(s)	1016, 6382
AflIII	ACRYGT	3 cut(s)	5283, 7358, 7573
AgeI	ACCGGT	1 cut(s)	8017
AhdI	GACNNNNNGTC	1 cut(s)	2823
AjuI	GAANNNNNNNTTGG	2 cut(s)	7724, 7756
AleI	CACNNNNGTG	1 cut(s)	2990
AloI	GAACNNNNNNTCC	2 cut(s)	7923, 7955
Alw21I	GWGCWC	8 cut(s)	2437, 3920, 4104, 5363, 5842, 5944, 6335, 6814
Alw44I	GTGCAC	3 cut(s)	5359, 5940, 6810
AlwNI	CAGNNNCTG	2 cut(s)	2855, 3211
Aor13HI	TCCGGA	1 cut(s)	101
ApaLI	GTGCAC	3 cut(s)	5359, 5940, 6810
ArsI	GACNNNNNNTTYG	2 cut(s)	6151, 6183
AseI	ATTAAT	1 cut(s)	3749
AsiGI	ACCGGT	1 cut(s)	8017
Asp700I	GAANNNNTTC	5 cut(s)	265, 324, 861, 1626, 7653
Asp718I	GGTACC	1 cut(s)	2995
AspLEI	GCGC	3 cut(s)	740, 1299, 7134
AspS9I	GGNCC	9 cut(s)	1166, 1436, 2896, 3391, 3593, 3973, 4421, 7605, 7962
AsuC2I	CCSGG	1 cut(s)	7984
AsuII	TTCGAA	1 cut(s)	5726
AsuNHI	GCTAGC	2 cut(s)	2296, 4918
AvaII	GGWCC	6 cut(s)	1166, 1436, 2896, 3593, 4421, 7605
AxyI	CCTNAGG	1 cut(s)	6039
BaeGI	GKGCMC	5 cut(s)	1927, 5363, 5944, 6814, 7620
BalI	TGGCCA	2 cut(s)	2331, 2972
BamHI	GGATCC	3 cut(s)	1654, 4499, 6183
BanI	GGYRCC	5 cut(s)	1922, 2379, 2995, 5822, 7744
BanII	GRGCYC	5 cut(s)	3920, 4104, 6111, 6335, 6738
BarI	GAAGNNNNNNTAC	4 cut(s)	5510, 5542, 7098, 7130
BauI	CACGAG	2 cut(s)	3797, 5607
BbrPI	CACGTG	4 cut(s)	2737, 3743, 7361, 7574
BbsI	GAAGAC	5 cut(s)	241, 2271, 5048, 5815, 7493
Bbv12I	GWGCWC	8 cut(s)	2437, 3920, 4104, 5363, 5842, 5944, 6335, 6814
BbvCI	CCTCAGC	2 cut(s)	5538, 6726
BceAI	ACGGC	5 cut(s)	930, 2808, 3215, 4634, 5865
BcgI	CGANNNNNNTGC	4 cut(s)	4779, 4813, 4821, 4855
BciVI	GTATCC	4 cut(s)	4138, 6667, 7185, 7275
BclI	TGATCA	5 cut(s)	2662, 2671, 5713, 6877, 7450
BcnI	CCSGG	1 cut(s)	7984
BfoI	RGCGCY	2 cut(s)	1300, 7135
BfrI	CTTAAG	2 cut(s)	1016, 6382
BfuAI	ACCTGC	3 cut(s)	1438, 1564, 3145
BfuI	GTATCC	4 cut(s)	4138, 6667, 7185, 7275
BglII	AGATCT	3 cut(s)	3231, 3909, 7075
BlpI	GCTNAGC	4 cut(s)	3836, 4622, 6535, 7956
BmcAI	AGTACT	3 cut(s)	2038, 6562, 6681
Bme18I	GGWCC	6 cut(s)	1166, 1436, 2896, 3593, 4421, 7605
BmeRI	GACNNNNNGTC	1 cut(s)	2823
BmgT120I	GGNCC	9 cut(s)	1166, 1436, 2896, 3391, 3593, 3973, 4421, 7605, 7962
BmrI	ACTGGG	3 cut(s)	5200, 5752, 6634
BmtI	GCTAGC	2 cut(s)	2300, 4922
BmuI	ACTGGG	3 cut(s)	5200, 5752, 6634
BoxI	GACNNNNGTC	2 cut(s)	5303, 7332
BpiI	GAAGAC	5 cut(s)	241, 2271, 5048, 5815, 7493
BplI	GAGNNNNNCTC	2 cut(s)	4776, 4808
BpmI	CTGGAG	4 cut(s)	1970, 2178, 7748, 7895
Bpu10I	CCTNAGC	7 cut(s)	2556, 2913, 3417, 5538, 5928, 6438, 6726
Bpu1102I	GCTNAGC	4 cut(s)	3836, 4622, 6535, 7956
Bpu14I	TTCGAA	1 cut(s)	5726
BpuEI	CTTGAG	5 cut(s)	373, 2928, 3934, 5826, 8084
BpuMI	CCSGG	1 cut(s)	7984
Bsa29I	ATCGAT	1 cut(s)	1528
BsaAI	YACGTR	5 cut(s)	2737, 3743, 5006, 7361, 7574
BsaBI	GATNNNNATC	6 cut(s)	2223, 2444, 4086, 5415, 7868, 8084
BsaHI	GRCGYC	1 cut(s)	1748
BsaI	GGTCTC	4 cut(s)	689, 1848, 2370, 3479
BsaWI	WCCGGW	5 cut(s)	101, 402, 475, 7513, 8017
BsaXI	ACNNNNNCTCC	8 cut(s)	1943, 1973, 6009, 6039, 7350, 7380, 7923, 7953
Bse118I	RCCGGY	4 cut(s)	3884, 5045, 8017, 8037
Bse21I	CCTNAGG	1 cut(s)	6039
Bse3DI	GCAATG	5 cut(s)	3171, 4766, 5473, 5514, 5568
Bse8I	GATNNNNATC	6 cut(s)	2223, 2444, 4086, 5415, 7868, 8084
BseAI	TCCGGA	1 cut(s)	101
BseCI	ATCGAT	1 cut(s)	1528
BseJI	GATNNNNATC	6 cut(s)	2223, 2444, 4086, 5415, 7868, 8084
BseMI	GCAATG	5 cut(s)	3171, 4766, 5473, 5514, 5568
BseRI	GAGGAG	3 cut(s)	1025, 5565, 7305
BseSI	GKGCMC	5 cut(s)	1927, 5363, 5944, 6814, 7620
BseYI	CCCAGC	3 cut(s)	1568, 4220, 7153
BsgI	GTGCAG	8 cut(s)	446, 767, 870, 3123, 3858, 3969, 4017, 4122
Bsh1236I	CGCG	1 cut(s)	2160
BshNI	GGYRCC	5 cut(s)	1922, 2379, 2995, 5822, 7744
BshTI	ACCGGT	1 cut(s)	8017
BshVI	ATCGAT	1 cut(s)	1528
BsiHKAI	GWGCWC	8 cut(s)	2437, 3920, 4104, 5363, 5842, 5944, 6335, 6814
BslFI	GGGAC	7 cut(s)	679, 1491, 2882, 3579, 4329, 4618, 5414
BsmBI	CGTCTC	3 cut(s)	99, 4806, 7850
BsmFI	GGGAC	7 cut(s)	679, 1491, 2882, 3579, 4329, 4618, 5414
BsmI	GAATGC	4 cut(s)	2426, 2539, 6673, 7022
Bso31I	GGTCTC	4 cut(s)	689, 1848, 2370, 3479
Bsp119I	TTCGAA	1 cut(s)	5726
Bsp13I	TCCGGA	1 cut(s)	101
Bsp1407I	TGTACA	5 cut(s)	870, 4255, 4888, 5371, 8082
Bsp1720I	GCTNAGC	4 cut(s)	3836, 4622, 6535, 7956
Bsp19I	CCATGG	3 cut(s)	4600, 6901, 7608
BspDI	ATCGAT	1 cut(s)	1528
BspEI	TCCGGA	1 cut(s)	101
BspFNI	CGCG	1 cut(s)	2160
BspHI	TCATGA	1 cut(s)	7809
BspMAI	CTGCAG	7 cut(s)	961, 1034, 4809, 5587, 6352, 6796, 7992
BspMI	ACCTGC	3 cut(s)	1438, 1564, 3145
BspOI	GCTAGC	2 cut(s)	2300, 4922
BspT104I	TTCGAA	1 cut(s)	5726
BspT107I	GGYRCC	5 cut(s)	1922, 2379, 2995, 5822, 7744
BspTI	CTTAAG	2 cut(s)	1016, 6382
BspTNI	GGTCTC	4 cut(s)	689, 1848, 2370, 3479
BsrDI	GCAATG	5 cut(s)	3171, 4766, 5473, 5514, 5568
BsrFI	RCCGGY	4 cut(s)	3884, 5045, 8017, 8037
BsrGI	TGTACA	5 cut(s)	870, 4255, 4888, 5371, 8082
BssAI	RCCGGY	4 cut(s)	3884, 5045, 8017, 8037
BssNAI	GTATAC	1 cut(s)	6231
BssNI	GRCGYC	1 cut(s)	1748
BssSI	CACGAG	2 cut(s)	3797, 5607
BssT1I	CCWWGG	8 cut(s)	1721, 4600, 4753, 4929, 6901, 6921, 7194, 7608
Bst1107I	GTATAC	1 cut(s)	6231
Bst2BI	CACGAG	2 cut(s)	3797, 5607
Bst6I	CTCTTC	5 cut(s)	103, 2280, 3045, 4629, 6168
BstACI	GRCGYC	1 cut(s)	1748
BstAFI	CTTAAG	2 cut(s)	1016, 6382
BstAPI	GCANNNNNTGC	5 cut(s)	1735, 2432, 3137, 3881, 4019
BstAUI	TGTACA	5 cut(s)	870, 4255, 4888, 5371, 8082
BstBAI	YACGTR	5 cut(s)	2737, 3743, 5006, 7361, 7574
BstBI	TTCGAA	1 cut(s)	5726
BstDSI	CCRYGG	3 cut(s)	4600, 6901, 7608
BstEII	GGTNACC	2 cut(s)	4933, 7634
BstENI	CCTNNNNNAGG	3 cut(s)	659, 6416, 6729
BstFNI	CGCG	1 cut(s)	2160
BstH2I	RGCGCY	2 cut(s)	1300, 7135
BstHHI	GCGC	3 cut(s)	740, 1299, 7134
BstPAI	GACNNNNGTC	2 cut(s)	5303, 7332
BstPI	GGTNACC	2 cut(s)	4933, 7634
BstSLI	GKGCMC	5 cut(s)	1927, 5363, 5944, 6814, 7620
BstUI	CGCG	1 cut(s)	2160
BstV2I	GAAGAC	5 cut(s)	241, 2271, 5048, 5815, 7493
BstXI	CCANNNNNNTGG	6 cut(s)	1307, 1618, 3290, 5006, 6194, 7560
BstZ17I	GTATAC	1 cut(s)	6231
Bsu15I	ATCGAT	1 cut(s)	1528
Bsu36I	CCTNAGG	1 cut(s)	6039
BsuI	GTATCC	4 cut(s)	4138, 6667, 7185, 7275
BsuTUI	ATCGAT	1 cut(s)	1528
BtgI	CCRYGG	3 cut(s)	4600, 6901, 7608
BtgZI	GCGATG	1 cut(s)	7253
BtsI	GCAGTG	3 cut(s)	458, 1039, 1084
BveI	ACCTGC	3 cut(s)	1438, 1564, 3145
CaiI	CAGNNNCTG	2 cut(s)	2855, 3211
CciI	TCATGA	1 cut(s)	7809
CfoI	GCGC	3 cut(s)	740, 1299, 7134
Cfr10I	RCCGGY	4 cut(s)	3884, 5045, 8017, 8037
Cfr13I	GGNCC	9 cut(s)	1166, 1436, 2896, 3391, 3593, 3973, 4421, 7605, 7962
ClaI	ATCGAT	1 cut(s)	1528
CseI	GACGC	5 cut(s)	428, 1735, 1756, 2691, 4529
CsiI	ACCWGGT	1 cut(s)	4848
CspAI	ACCGGT	1 cut(s)	8017
DraI	TTTAAA	5 cut(s)	1144, 1419, 2088, 4066, 6222
DraIII	CACNNNGTG	1 cut(s)	5369
DriI	GACNNNNNGTC	1 cut(s)	2823
EaeI	YGGCCR	3 cut(s)	57, 2329, 2970
Eam1104I	CTCTTC	5 cut(s)	103, 2280, 3045, 4629, 6168
Eam1105I	GACNNNNNGTC	1 cut(s)	2823
EarI	CTCTTC	5 cut(s)	103, 2280, 3045, 4629, 6168
EciI	GGCGGA	2 cut(s)	55, 7358
Ecl136II	GAGCTC	3 cut(s)	3918, 4102, 6333
Eco130I	CCWWGG	8 cut(s)	1721, 4600, 4753, 4929, 6901, 6921, 7194, 7608
Eco24I	GRGCYC	5 cut(s)	3920, 4104, 6111, 6335, 6738
Eco31I	GGTCTC	4 cut(s)	689, 1848, 2370, 3479
Eco32I	GATATC	2 cut(s)	1831, 6979
Eco47I	GGWCC	6 cut(s)	1166, 1436, 2896, 3593, 4421, 7605
Eco53kI	GAGCTC	3 cut(s)	3918, 4102, 6333
Eco72I	CACGTG	4 cut(s)	2737, 3743, 7361, 7574
Eco81I	CCTNAGG	1 cut(s)	6039
Eco91I	GGTNACC	2 cut(s)	4933, 7634
EcoICRI	GAGCTC	3 cut(s)	3918, 4102, 6333
EcoNI	CCTNNNNNAGG	3 cut(s)	659, 6416, 6729
EcoO109I	RGGNCCY	1 cut(s)	3593
EcoO65I	GGTNACC	2 cut(s)	4933, 7634
EcoRI	GAATTC	4 cut(s)	1626, 2107, 2322, 6944
EcoRV	GATATC	2 cut(s)	1831, 6979
EcoT14I	CCWWGG	8 cut(s)	1721, 4600, 4753, 4929, 6901, 6921, 7194, 7608
EcoT22I	ATGCAT	2 cut(s)	1495, 3441
EcoT38I	GRGCYC	5 cut(s)	3920, 4104, 6111, 6335, 6738
ErhI	CCWWGG	8 cut(s)	1721, 4600, 4753, 4929, 6901, 6921, 7194, 7608
Esp3I	CGTCTC	3 cut(s)	99, 4806, 7850
FaqI	GGGAC	7 cut(s)	679, 1491, 2882, 3579, 4329, 4618, 5414
FauI	CCCGC	5 cut(s)	816, 3765, 5038, 6532, 7953
FauNDI	CATATG	5 cut(s)	1039, 1935, 3409, 6567, 7029
FbaI	TGATCA	5 cut(s)	2662, 2671, 5713, 6877, 7450
FblI	GTMKAC	2 cut(s)	6230, 7692
FriOI	GRGCYC	5 cut(s)	3920, 4104, 6111, 6335, 6738
GlaI	GCGC	3 cut(s)	739, 1298, 7133
GsaI	CCCAGC	3 cut(s)	1572, 4224, 7157
GsuI	CTGGAG	4 cut(s)	1970, 2178, 7748, 7895
HaeII	RGCGCY	2 cut(s)	1300, 7135
HgaI	GACGC	5 cut(s)	428, 1735, 1756, 2691, 4529
HhaI	GCGC	3 cut(s)	740, 1299, 7134
Hin1I	GRCGYC	1 cut(s)	1748
Hin6I	GCGC	3 cut(s)	738, 1297, 7132
HinP1I	GCGC	3 cut(s)	738, 1297, 7132
HincII	GTYRAC	7 cut(s)	4239, 4768, 5317, 6052, 6323, 6492, 6627
HindII	GTYRAC	7 cut(s)	4239, 4768, 5317, 6052, 6323, 6492, 6627
HindIII	AAGCTT	6 cut(s)	212, 1715, 1799, 3419, 4965, 5873
HpaI	GTTAAC	2 cut(s)	6492, 6627
Hpy99I	CGWCG	2 cut(s)	1326, 6379
Hsp92I	GRCGYC	1 cut(s)	1748
HspAI	GCGC	3 cut(s)	738, 1297, 7132
Kpn2I	TCCGGA	1 cut(s)	101
KpnI	GGTACC	1 cut(s)	2999
Ksp22I	TGATCA	5 cut(s)	2662, 2671, 5713, 6877, 7450
KspAI	GTTAAC	2 cut(s)	6492, 6627
MabI	ACCWGGT	1 cut(s)	4848
MfeI	CAATTG	2 cut(s)	468, 3080
MlsI	TGGCCA	2 cut(s)	2331, 2972
MluNI	TGGCCA	2 cut(s)	2331, 2972
MmeI	TCCRAC	5 cut(s)	408, 760, 1941, 3271, 4887
Mox20I	TGGCCA	2 cut(s)	2331, 2972
Mph1103I	ATGCAT	2 cut(s)	1495, 3441
MroI	TCCGGA	1 cut(s)	101
MroXI	GAANNNNTTC	5 cut(s)	265, 324, 861, 1626, 7653
MscI	TGGCCA	2 cut(s)	2331, 2972
Msp20I	TGGCCA	2 cut(s)	2331, 2972
MspCI	CTTAAG	2 cut(s)	1016, 6382
MunI	CAATTG	2 cut(s)	468, 3080
Mva1269I	GAATGC	4 cut(s)	2426, 2539, 6673, 7022
MvnI	CGCG	1 cut(s)	2160
NciI	CCSGG	1 cut(s)	7984
NcoI	CCATGG	3 cut(s)	4600, 6901, 7608
NdeI	CATATG	5 cut(s)	1039, 1935, 3409, 6567, 7029
NheI	GCTAGC	2 cut(s)	2296, 4918
NmeAIII	GCCGAG	4 cut(s)	159, 3280, 4553, 7135
NsiI	ATGCAT	2 cut(s)	1495, 3441
NspV	TTCGAA	1 cut(s)	5726
OliI	CACNNNNGTG	1 cut(s)	2990
PaeI	GCATGC	4 cut(s)	759, 1483, 2064, 3443
PagI	TCATGA	1 cut(s)	7809
PaqCI	CACCTGC	1 cut(s)	1438
PasI	CCCWGGG	1 cut(s)	6255
PciI	ACATGT	1 cut(s)	5283
PctI	GAATGC	4 cut(s)	2426, 2539, 6673, 7022
PdmI	GAANNNNTTC	5 cut(s)	265, 324, 861, 1626, 7653
PflFI	GACNNNGTC	2 cut(s)	1440, 7912
PflMI	CCANNNNNTGG	2 cut(s)	609, 1433
PfoI	TCCNGGA	3 cut(s)	241, 3265, 7872
PinAI	ACCGGT	1 cut(s)	8017
PmaCI	CACGTG	4 cut(s)	2737, 3743, 7361, 7574
PmlI	CACGTG	4 cut(s)	2737, 3743, 7361, 7574
Ppu21I	YACGTR	5 cut(s)	2737, 3743, 5006, 7361, 7574
PpuMI	RGGWCCY	1 cut(s)	3593
PscI	ACATGT	1 cut(s)	5283
PshAI	GACNNNNGTC	2 cut(s)	5303, 7332
PshBI	ATTAAT	1 cut(s)	3749
Psp124BI	GAGCTC	3 cut(s)	3920, 4104, 6335
Psp1406I	AACGTT	1 cut(s)	7541
Psp5II	RGGWCCY	1 cut(s)	3593
PspCI	CACGTG	4 cut(s)	2737, 3743, 7361, 7574
PspEI	GGTNACC	2 cut(s)	4933, 7634
PspFI	CCCAGC	3 cut(s)	1568, 4220, 7153
PspPI	GGNCC	9 cut(s)	1166, 1436, 2896, 3391, 3593, 3973, 4421, 7605, 7962
PspPPI	RGGWCCY	1 cut(s)	3593
PstI	CTGCAG	7 cut(s)	961, 1034, 4809, 5587, 6352, 6796, 7992
PstNI	CAGNNNCTG	2 cut(s)	2855, 3211
PsyI	GACNNNGTC	2 cut(s)	1440, 7912
SacI	GAGCTC	3 cut(s)	3920, 4104, 6335
Sau96I	GGNCC	9 cut(s)	1166, 1436, 2896, 3391, 3593, 3973, 4421, 7605, 7962
ScaI	AGTACT	3 cut(s)	2038, 6562, 6681
SexAI	ACCWGGT	1 cut(s)	4848
SfuI	TTCGAA	1 cut(s)	5726
SinI	GGWCC	6 cut(s)	1166, 1436, 2896, 3593, 4421, 7605
SmlI	CTYRAG	7 cut(s)	388, 1016, 2943, 3913, 5841, 6382, 8063
SmoI	CTYRAG	7 cut(s)	388, 1016, 2943, 3913, 5841, 6382, 8063
SphI	GCATGC	4 cut(s)	759, 1483, 2064, 3443
SspI	AATATT	1 cut(s)	7654
SstI	GAGCTC	3 cut(s)	3920, 4104, 6335
StyI	CCWWGG	8 cut(s)	1721, 4600, 4753, 4929, 6901, 6921, 7194, 7608
TaqII	GACCGA	1 cut(s)	2709
TauI	GCSGC	5 cut(s)	62, 713, 944, 3560, 6973
TspGWI	ACGGA	4 cut(s)	80, 273, 2513, 5334
Tth111I	GACNNNGTC	2 cut(s)	1440, 7912
Van91I	CCANNNNNTGG	2 cut(s)	609, 1433
Vha464I	CTTAAG	2 cut(s)	1016, 6382
VneI	GTGCAC	3 cut(s)	5359, 5940, 6810
VpaK11BI	GGWCC	6 cut(s)	1166, 1436, 2896, 3593, 4421, 7605
VspI	ATTAAT	1 cut(s)	3749
XagI	CCTNNNNNAGG	3 cut(s)	659, 6416, 6729
XbaI	TCTAGA	3 cut(s)	118, 1093, 4277
XcmI	CCANNNNNNNNNTGG	1 cut(s)	6618
XmiI	GTMKAC	2 cut(s)	6230, 7692
XmnI	GAANNNNTTC	5 cut(s)	265, 324, 861, 1626, 7653
ZrmI	AGTACT	3 cut(s)	2038, 6562, 6681
Zsp2I	ATGCAT	2 cut(s)	1495, 3441

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.