Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0014203.1

Orthogroup ID

OG0004721

Physical Location & Seq

Genomic Coordinates Forward (+)

71472 .. 84279

Gene Structure 12808 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0014203.1_g000022.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 8298 bp

atggaaagcgcggccagtgaagtggaaggtacgcttcgacctttttttatactgacagattgcagctcacttcgaaaattgggagggaagagaaacacagagagagtgaaagggaaagggcatgagagaatggccaacctgagtagcctactccacgagctccgagaacgcatagcagcctcctcatccactcctcctaacaactcacacgacgtcgctttggagatccgattccgcgccgtccttcccaaccttcttcaagcttacgtcgtcccctctccctccgcggatgagagagaagtgatagctgtattgaggttcatcggttacacggcgaagcattttcccggagtcttttaccatggcaaggctgccgcgattcttcctatgatcggttgtattctgcctttctttgcagagccggcgttccgttctaggcatggagtgatatttgatacgcttggatcgcttttaaccttacttcgtagtggagctcaggatgcatatcgtcagttttttgtagattccatgctcgttgttcaagatcttttgtgtgtcgcatcagtctctgcagacatatcaagttttacagaatcaactagagtgactttaaagtgtttctgcgagtccttcaatgcaatttttgatgatccttcacatcttggtgatctcccacatagtatcaaacctgttgatggcactgggatcttgattaaccttacaggaaaagcaaggtggcaacctttcacaacttggatgattaagcttcttggaaaatgcttaactgaaggaactctatatgtggatggactcatcaatatgccatttgttatggctgcatggtcccttttttgttatggggatgctgatttgcacatggcattttttgaatttgcacgcatcgttggatctgtgataaaatgtgacgtcattccttatcataacatagtccagtcgatatcatctatattaagcgaggacaaagaggggactcctgcatttagaaacacggtttatgattcgtccatgggtggttgcctagaggcattgcactctaattgccctgagggtatagtcaagctaacagctgcacattttgtcaatgtatttcctcattcaatgaggagaacccgaagccaggagcttaaggttgcattgtgcaacacatacatacggattgcgaagatttgcccccctcatatctggaggccagaaattctcctatatgtactttcatgtccagatccctgcttttcattgatagattgcttacatgtagctctctctatacttggtcctgatcttgttggaggaagaattacagataattcctgccagagtttatccacattaagtgataaatcaattgaaaactcacaggttggagaaaaaagacctattgaggatgtggattctttcaacactaaacgccaaaaggttgatgaaaaaatcatcaatcctgattctaatattcagttggaatggcagtgtgctcatatagttccttgtgagacagaagactatgcaaatcagatgcataaatcactcctttcttttgctgaatgtttaaaatctcctggtgtctgtcctaattccttaagacctgatctcgcgttaatggctcttagcattctttgcattgcgttctgtagatatcctgagaccaatctgtcactatgcatctttcatcagatgtatacatggataccttggatatgccaacaggcaaagcaaggaagtacatttgaacttgatatttccatctacctggaaggaattcactgtatgttgcggttgcaaaattgcttaatcatgaagtgtatggacagtacgcttgtcgatgctgatcttatacatgtccttctaaagcttccatggacccattctcatgtagttactgactgccatcaattgtggaaaacaaaatgcatctcagttcaagttgcatgcaaacttggtcatagcacaagaattgaaactcaacttgaagtattggatttgagtctcaatgatgaatgtgacgaagttataattgaagctataacttctatgcccgtgattgtcatgtggtctggcctcagtggactttctcacatattcagaaggcttgagctcttggggcgacagagaagtgagaaggttaagaatatcattcccttttctcttggttttttgtcatgtctttacggatctcatagcaatggagatgacataaatagaagtcagtgtaaactatttttaaaaatgaaaagtgagagacacagtcaaacagtggattatttactgcaaggattctggtgttcaaagtgtgaccgaagtgttcaacacaatactgagtcatattcaaatatcataaatctacctgacaagcccagagaattggactgtaattttctccatcttcagtctacgtattttcagcttcttaatgatgagtcatctgaagagattcaagtggcttgtgtgaaaaatatccgccgagttcttgtacatgggggcatagagaatctgttggagtcaagatttgaatggattaaatgtgttaaatatctactcattaataccaagaaggctataagagaagcattctgcactcagattagttcattcattgaggattcaattttgagttgcttatttcctgatgagggcatgtcaagtaatggtagagaagaaaggtttctgaacataatcaacagctccttttcagaaactgaagacctccaaatcattgagactcttttggaatcaacagctgaaataatgattgcagttgatattcagagtcaattattcttgttttctcttcttttgttggttggtcaacttgataatccacacacgacagtgagaatgattgcagcgaagttgatacacaaagcttgctgttttcatcttaaaggaggtttccaagtaatccttctgaaagttgttcatgttcgaaatgagctatttgactatctgtcttcgagcctctctagccgtccgactatggtccaagagtttgcagaatcagttcttggtattgaaatagaagaacttgtcaagaaaatggttcccgtagttcttccgaagcttgtagtgtctcagcaggatgatgatcaagcagttgacaccttatatgaactggccaagtggttaaacaccgatgttgcaggtcttatagttctatgggtgccaaaagtgctagcttttgctctccatcaaccagatgtgcgagaattagatgctgctgtacagttttaccatacacagatcagttctaacaaaagagaaatctttgctgctgcattaaataatcttttagatgaactcatatgctttctggatggaggtgattcagatgagataagcggaaggttagcaagagtacctgagacgataaaagaggttgctagagttttggatgaaggtgaagatctaccaaactttttgaggaatcattttgcccaccttcttaacagtatcgatagaaagatgctccatgcagaagaattttcattgcagaaacaagccttgcaacgaattgagatgctaattaaaatgatgggtcgtcatcttagtacttatgtgcctaaactaatggttcttctcatgcatgctattgataaagacagcctccagagtgagggtctctcagtgttgcattttttcattgtgcagctggtgaaagtatcaccggctagcactaaacatgtaatttcacaagtttttgctgcccttattccctttcttgagagagatgaagaaagtccagtacatctggataaagtggtaaaaattttagaagaacttgtgctaaataacagggatattctaaagcagcatattcgtgagttccctccattgcccagtattccagccttaataaaagtgaacaaggctatacaagaagccagagggtcaatgactttgagggatcgattgcgggatgttgttgatggtctgaatcatgacagcttaaatgtgagatacatggttgtgtgtgagttgaaaaagttgctgaacctggaacgggaaggggttacatctctaataactgctgaaggtggtgcggatatggaaattttgagctctttaatcagatctctacttaaaggatgtgctgaagaatcaaggagagcagttggacagcggctaaagttggtgtgtgctgactgccttggggccctgggtgcagttgaccctgctaaagtgaaggccttttcatgccaacgctttaaaattgaatgctctgatgatgaccttatctatgagttgattcaaaagcaacttgcacgggcctttagagctgcacctgacactataattcaagattcagctgtagtggccatacaggaactgctaaagattgctggttgtgaggcctcattacatgagaatgctgctgcttctatgttggctccaaaggacaaagagcctctgatgggttctgcttctggaatgatgactactgatggtacaaatgagatgactagaaggggtcagagattgtgggaccggttctccaattatgtgaaagaaataattgccccttatttgtcctctagatttcaacttcctaatgttgctgatcctgtatttgttggcccaatttaccgtccatctatgtcattcagaagatggatattcttctggataagaaagctgactgcacatgctactggttctcgtgcaagaattttcaatgcttgtcgaggtatagtgcgccaggatatgcaaacagcaatttatctgcttccatatttagttcttaatgctgtctgtcatggcacagaggaggcacgctatggcataacagaagaaatcctatatgttcttgatgttgctgcatctcataacagtgaggatgcagtgcatggtgtcaatggtcggaaaaatgaagtttgtgttcaagctgtgttcattctccttgataatcttggtcaatgggtggatgacgttacacaagaactattccgttcttttcaattattagcttctaagcaacaaatatccaagaccaggcatcaaactcagaatactaccaatcaggaccaacttcgtctacagtgtgaacatgtttcaaaactcttgtctgcagttccaaaggagacccttgccagggcctccttcaggtgtcaggcttatgcaagatccttcatgtattttgagttgtacgtgaggggaaagtcaggttctttcaaccctgcatctgagcgaagtggttcatttgatgatgcagatgtttcatatctgatggaaatatacagctgcctggatgagcctgatggtctttctggatttgcatttttacgtaaatctttggaattacaagaccagctcttgataaacaaaaaagccgggaactgggcagaggttttaacttcttgtgaacaagctttgcagatggaaccaacatcagttcaaaagcagtctgatgtgcttaactgtttattaaacatgtgtcaccttcaggctatggtgactcatgtggatggcttaatgtgtaggattccccaatacaagaaaacatggtgcatgcaaggtgtgcaggcagcatggagacttggcaggtgggatttgatggatgagtaccttagtggagctgatcaagaaggtttactttgtagcagttctgaaagtaatgcgtcatttgatatggatgttgcaaaaattctgcaggcaatgatgaagaaggatcagttctcagttgaagaaaaaattgccctctccaagcaagctctaattgctcccctttctgctgcaggcatggattcttatgtgcgggcttacccatttgtcgtgaaacttcacctgctacgagagcttgaggatttttatactcttcttggtgatgcttctttcttggagaaatcgtttgcatttgatgatcctaaattctcaaaagtgagggagaactgggaaaaccgtctcagatttactcagccatcactctgggcaagagagccacttttggctttccgaagattggtttttgctaacagtggtcttgaggctcaagttgggaactgctggcttcaatatgcaaagctctgtcgcatggctggtcattatgagacagcaaatcaggctattctggaagcccaagctaccaatgcacctaacgttcacatggagaaggctaaacttctctggagcaccaggcgatctgatggtgcaattgcacagttgcaacagtgtctcttgaacatgcctgaagggattgtaggctccaatgcaattgcatcaattaccagtctttcactggttccgccaaacctgccccctttagttaataatactcaagcttggaatgaaaatcgagatattgcaaagacacttctcctctattctaggtggatccattacactgggcagaagcagaaagaagatgtcataagtctatatagcagggtgagggaactgcagcccaagtgggagaaaggatatttttacatggctaaatattatgaggaagtactagctgatgccaggaagcgtcaggaagaaaatcttgaactgggtcctaggaaattaccatcaaatagtgctattgttggttcttcaaatttaaatacagagaaggcttggtgggcatatgtgcctgacatactgatattctatgcaaaagggcttcatcggggccacaagaatctctttcaggcacttccaaggttgttaaccctatggtttgactttgggactatgtatgaaaggagtggcacatcatccaataaggatctcaaaaatgtccacatgatggtgatgagatgcatgcgagggtgtttgaaggacttgccaacatatcagtggctaacagtactaccacagttggtttcaagaatctgccaccagaatgaggaagtagttcgattggtcaaaagcatcatcacatcagttctccggcaatacccacaacaagccctgtggattatggcagcggtttcaaaatccactgttccatccaggagggatgcagctgctgaaattctacaggaggcacggaaagggttcagccaaggaactggtggaagcaatctgtttgctcagtttgccagtctgattgatcattttatcaagctgtgcttccatgcttgtcagacaaaggcgaaaacaatcaatgtctctactgaatttagtctcttaaagaggatgatgccgctgggaattatcatgccaattcagcaatctctaactgttagcctaccgacatacgatgggaagctcactgactcacttaagtctgatatcttttctgcgactgatcttcctacaatatcaggaatacgcgatgaggctgagattctttcttcccttcagcgacctaagaaaattgttctattgggcagcgacggcattgaacgtccgttcctctgcaaacccaaggatgacctcaggaaagatgcccggatgatggagttcacagcaatgataaaccgtttgttgtctaaatacccagcaagccgtcggaggaagctctacattcgcacctttgcagtaattcctttgacagaggattgtggcatgatagaatgggtgccccacacacgtggacttcggcatatacttcaagacatatatatgaactgcggaaactttggtattgatacaaattcaaagatcaagcgcttatatgatcaatgcaagggtaaaataccagaagatgagatgttgaaggacaaaattcttccaatgttccctccagttttccacaagtggttcctgaccactttttctgagccagctgcttggtttagggcacggattgcttatgcacacactactgcagtttggtccatggttggacatattgtggggcttggtgaccgacacggggaaaacattctttttgattctacaacaggtgattgtgttcatgttgatttcagttgcttattcgataaaggcttgcagttggagaagcctgaactggtgcctttcagattgactcagaatatgattgatggcttgggcatcactggttatgagggaatctttttgaggatctgtgaaatcacactttcagtactgaggatgcatcgggagacattgatgagtgttcttgagacttttgtccatgatcctcttgtagaatggacaaaatcacacaaatctagtagagtagaagttcagaatccacacgcacagctagccatcagtaacattgaggcaagattgcaaggagtagttgtcggtgtcggagcagcaccatctttgcccttggctgtagaaggtcaggctcgtcgattaatagctgaagcagtctcccacaaaaatctcggaaagatgtatatctggtggatgccatggttttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000723 GO:0000726 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005911 GO:0006139 GO:0006259 GO:0006278 GO:0006281 GO:0006282 GO:0006302 GO:0006303 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007004 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009506 GO:0009628 GO:0009987 GO:0010035 GO:0010038 GO:0010044 GO:0010212 GO:0010332 GO:0010833 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0022414 GO:0030054 GO:0031323 GO:0031347 GO:0032200 GO:0032204 GO:0032501 GO:0032504 GO:0033043 GO:0033044 GO:0033554 GO:0034641 GO:0034645 GO:0034654 GO:0042221 GO:0042592 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043247 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0046483 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051128 GO:0051171 GO:0051276 GO:0051321 GO:0051716 GO:0055044 GO:0060249 GO:0060255 GO:0065007 GO:0065008 GO:0071704 GO:0071840 GO:0071897 GO:0080090 GO:0080134 GO:0080135 GO:0090304 GO:1901360 GO:1901362 GO:1901576 GO:2001020

KEGG Pathways

Metabolic & Signaling

ko03460 ko04110 ko04115 ko04214 ko04218 ko05165 ko05166 map03460 map04110 map04115 map04214 map04218 map05165 map05166

Pfam Domains

Protein Families

FAT FATC PI3_PI4_kinase UME

Protein Analysis

2765

Amino Acids

312.22

Weight (kDa)

6.66

Isoelectric Point (pI)

49.43

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004721)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G40820 AT5G40820 AT5G40820 AT5G40820
fragaria_vesca	FvH4_2g15770 FvH4_2g15770 FvH4_2g15770 FvH4_2g15770 FvH4_2g15770
malus_domestica	MD05G1126600.v1.1
prunus_persica	Prupe.8G170300_v2.0.a1 Prupe.8G170300_v2.0.a1 Prupe.8G170300_v2.0.a1 Prupe.8G170300_v2.0.a1 Prupe.8G170300_v2.0.a1 Prupe.8G170300_v2.0.a1 Prupe.8G170300_v2.0.a1 Prupe.8G170300_v2.0.a1
pyrus_communis	pycom05g12250 pycom10g11100 pycom10g11110
rosa_chinensis	RchiOBHm_Chr6g0279121
rosa_laevigata	RLG00000013166
rosa_multiflora	Rmu_sc0014203.1_g000022
rosa_roxburghii	Rroxscaffold_7G00189110
rosa_rugosa	Rorug06G0122400
rosa_samantha	Rh6AG231100 Rh6BG236000 Rh6CG238100 Rh6DG229700
rosa_wichuraiana	Rw6G020240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2030
AarI	CACCTGC	2 cut(s)	5544, 5805
AasI	GACNNNNNNGTC	1 cut(s)	1669
AatII	GACGTC	2 cut(s)	216, 930
Acc36I	ACCTGC	4 cut(s)	3146, 5544, 5805, 6270
AccB1I	GGYRCC	3 cut(s)	3175, 7519, 7915
AccB7I	CCANNNNNTGG	1 cut(s)	6742
AccI	GTMKAC	3 cut(s)	1697, 2408, 5047
AccII	CGCG	6 cut(s)	11, 237, 287, 377, 1613, 7272
AclI	AACGTT	1 cut(s)	6108
AcoI	YGGCCR	4 cut(s)	12, 132, 3129, 4329
AcvI	CACGTG	1 cut(s)	7532
AcyI	GRCGYC	2 cut(s)	213, 927
AfeI	AGCGCT	1 cut(s)	7610
AflII	CTTAAG	3 cut(s)	1145, 1597, 7220
AflIII	ACRYGT	6 cut(s)	1273, 1855, 3694, 5059, 5442, 7529
AgeI	ACCGGT	1 cut(s)	4500
AhdI	GACNNNNNGTC	1 cut(s)	2962
AjuI	GAANNNNNNNTTGG	4 cut(s)	2904, 2936, 3003, 3035
AleI	CACNNNNGTG	2 cut(s)	2846, 7530
AloI	GAACNNNNNNTCC	2 cut(s)	7335, 7367
Alw21I	GWGCWC	6 cut(s)	162, 496, 1495, 2115, 4076, 6143
AlwNI	CAGNNNCTG	4 cut(s)	569, 2714, 4342, 6965
Aor51HI	AGCGCT	1 cut(s)	7610
ApaI	GGGCCC	1 cut(s)	4171
ArsI	GACNNNNNNTTYG	2 cut(s)	5060, 5092
AseI	ATTAAT	2 cut(s)	2559, 8231
AsiGI	ACCGGT	1 cut(s)	4500
Asp700I	GAANNNNTTC	8 cut(s)	1776, 2448, 2679, 3015, 5206, 6849, 6992, 7824
AspA2I	CCTAGG	1 cut(s)	6509
AspLEI	GCGC	4 cut(s)	11, 239, 4710, 7611
AsuC2I	CCSGG	3 cut(s)	348, 5344, 7390
AsuII	TTCGAA	2 cut(s)	73, 2941
AsuNHI	GCTAGC	3 cut(s)	3187, 3683, 8131
AvaII	GGWCC	8 cut(s)	843, 1295, 1878, 2995, 4498, 5035, 6506, 7776
AvrII	CCTAGG	1 cut(s)	6509
AxyI	CCTNAGG	2 cut(s)	1065, 7376
BaeGI	GKGCMC	3 cut(s)	4171, 7524, 7744
BalI	TGGCCA	3 cut(s)	134, 3131, 4331
BamHI	GGATCC	1 cut(s)	6342
BanI	GGYRCC	3 cut(s)	3175, 7519, 7915
BanII	GRGCYC	5 cut(s)	162, 496, 2115, 4076, 4171
BauI	CACGAG	2 cut(s)	155, 4671
BbrPI	CACGTG	1 cut(s)	7532
BbsI	GAAGAC	3 cut(s)	1524, 2724, 2958
Bbv12I	GWGCWC	6 cut(s)	162, 496, 1495, 2115, 4076, 6143
BceAI	ACGGC	5 cut(s)	224, 348, 2967, 7351, 7431
BcgI	CGANNNNNNTGC	2 cut(s)	3812, 3846
BciVI	GTATCC	1 cut(s)	1698
BclI	TGATCA	4 cut(s)	3100, 5590, 7048, 7618
BcnI	CCSGG	3 cut(s)	348, 5344, 7390
BfoI	RGCGCY	1 cut(s)	7612
BfrI	CTTAAG	3 cut(s)	1145, 1597, 7220
BfuAI	ACCTGC	4 cut(s)	3146, 5544, 5805, 6270
BfuI	GTATCC	1 cut(s)	1698
BglII	AGATCT	3 cut(s)	544, 3418, 4085
BlnI	CCTAGG	1 cut(s)	6509
BmcAI	AGTACT	4 cut(s)	3565, 6462, 6804, 8010
Bme18I	GGWCC	8 cut(s)	843, 1295, 1878, 2995, 4498, 5035, 6506, 7776
BmeRI	GACNNNNNGTC	1 cut(s)	2962
BmrI	ACTGGG	6 cut(s)	711, 3846, 5359, 5911, 6363, 6512
BmtI	GCTAGC	3 cut(s)	3191, 3687, 8135
BmuI	ACTGGG	6 cut(s)	711, 3846, 5359, 5911, 6363, 6512
BoxI	GACNNNNGTC	2 cut(s)	2993, 8054
BpiI	GAAGAC	3 cut(s)	1524, 2724, 2958
BplI	GAGNNNNNCTC	2 cut(s)	3620, 3652
BpmI	CTGGAG	4 cut(s)	1225, 3605, 6157, 7668
Bpu10I	CCTNAGC	1 cut(s)	495
Bpu14I	TTCGAA	2 cut(s)	73, 2941
BpuEI	CTTGAG	7 cut(s)	2129, 3755, 5831, 5985, 6014, 6270, 8066
BpuMI	CCSGG	3 cut(s)	348, 5344, 7390
Bsa29I	ATCGAT	2 cut(s)	3468, 3922
BsaAI	YACGTR	4 cut(s)	2412, 5161, 5297, 7532
BsaBI	GATNNNNATC	4 cut(s)	504, 1845, 3099, 8273
BsaHI	GRCGYC	2 cut(s)	213, 927
BsaI	GGTCTC	3 cut(s)	1655, 3638, 5087
BsaWI	WCCGGW	1 cut(s)	4500
BsaXI	ACNNNNNCTCC	6 cut(s)	4490, 4520, 5843, 5873, 8157, 8187
Bse118I	RCCGGY	3 cut(s)	421, 3679, 4500
Bse21I	CCTNAGG	2 cut(s)	1065, 7376
Bse3DI	GCAATG	7 cut(s)	1046, 1638, 2206, 3500, 3845, 5673, 7416
Bse8I	GATNNNNATC	4 cut(s)	504, 1845, 3099, 8273
BseCI	ATCGAT	2 cut(s)	3468, 3922
BseJI	GATNNNNATC	4 cut(s)	504, 1845, 3099, 8273
BseMI	GCAATG	7 cut(s)	1046, 1638, 2206, 3500, 3845, 5673, 7416
BseRI	GAGGAG	5 cut(s)	172, 183, 1138, 4793, 6317
BseSI	GKGCMC	3 cut(s)	4171, 7524, 7744
BseYI	CCCAGC	2 cut(s)	7144, 7438
BsgI	GTGCAG	7 cut(s)	1074, 2575, 3680, 4197, 4278, 4638, 5552
Bsh1236I	CGCG	6 cut(s)	11, 237, 287, 377, 1613, 7272
BshNI	GGYRCC	3 cut(s)	3175, 7519, 7915
BshTI	ACCGGT	1 cut(s)	4500
BshVI	ATCGAT	2 cut(s)	3468, 3922
BsiHKAI	GWGCWC	6 cut(s)	162, 496, 1495, 2115, 4076, 6143
BsiSI	CCGG	7 cut(s)	348, 422, 3680, 4501, 5343, 6886, 7390
BslFI	GGGAC	5 cut(s)	257, 829, 1003, 4511, 6697
BsmBI	CGTCTC	2 cut(s)	3371, 5918
BsmFI	GGGAC	5 cut(s)	257, 829, 1003, 4511, 6697
BsmI	GAATGC	4 cut(s)	1629, 2585, 4235, 4387
Bso31I	GGTCTC	3 cut(s)	1655, 3638, 5087
Bsp119I	TTCGAA	2 cut(s)	73, 2941
Bsp120I	GGGCCC	1 cut(s)	4167
Bsp1286I	GDGCHC	9 cut(s)	162, 496, 1495, 2115, 4076, 4171, 6143, 7524, 7744
Bsp1407I	TGTACA	2 cut(s)	2488, 3235
Bsp19I	CCATGG	5 cut(s)	361, 1026, 1874, 7779, 8288
BspDI	ATCGAT	2 cut(s)	3468, 3922
BspFNI	CGCG	6 cut(s)	11, 237, 287, 377, 1613, 7272
BspHI	TCATGA	2 cut(s)	1812, 3952
BspMAI	CTGCAG	6 cut(s)	574, 5083, 5664, 5749, 6411, 7771
BspMI	ACCTGC	4 cut(s)	3146, 5544, 5805, 6270
BspOI	GCTAGC	3 cut(s)	3191, 3687, 8135
BspT104I	TTCGAA	2 cut(s)	73, 2941
BspT107I	GGYRCC	3 cut(s)	3175, 7519, 7915
BspTI	CTTAAG	3 cut(s)	1145, 1597, 7220
BspTNI	GGTCTC	3 cut(s)	1655, 3638, 5087
BsrDI	GCAATG	7 cut(s)	1046, 1638, 2206, 3500, 3845, 5673, 7416
BsrFI	RCCGGY	3 cut(s)	421, 3679, 4500
BsrGI	TGTACA	2 cut(s)	2488, 3235
BssAI	RCCGGY	3 cut(s)	421, 3679, 4500
BssNAI	GTATAC	1 cut(s)	1698
BssNI	GRCGYC	2 cut(s)	213, 927
BssSI	CACGAG	2 cut(s)	155, 4671
Bst1107I	GTATAC	1 cut(s)	1698
Bst2BI	CACGAG	2 cut(s)	155, 4671
Bst6I	CTCTTC	4 cut(s)	83, 2439, 2811, 5832
BstACI	GRCGYC	2 cut(s)	213, 927
BstAFI	CTTAAG	3 cut(s)	1145, 1597, 7220
BstAPI	GCANNNNNTGC	3 cut(s)	1635, 5530, 7748
BstAUI	TGTACA	2 cut(s)	2488, 3235
BstBAI	YACGTR	4 cut(s)	2412, 5161, 5297, 7532
BstBI	TTCGAA	2 cut(s)	73, 2941
BstDSI	CCRYGG	6 cut(s)	285, 361, 1026, 1874, 7779, 8288
BstEII	GGTNACC	1 cut(s)	7805
BstENI	CCTNNNNNAGG	1 cut(s)	5113
BstFNI	CGCG	6 cut(s)	11, 237, 287, 377, 1613, 7272
BstH2I	RGCGCY	1 cut(s)	7612
BstHHI	GCGC	4 cut(s)	11, 239, 4710, 7611
BstPAI	GACNNNNGTC	2 cut(s)	2993, 8054
BstPI	GGTNACC	1 cut(s)	7805
BstSLI	GKGCMC	3 cut(s)	4171, 7524, 7744
BstSNI	TACGTA	2 cut(s)	2412, 5297
BstUI	CGCG	6 cut(s)	11, 237, 287, 377, 1613, 7272
BstV2I	GAAGAC	3 cut(s)	1524, 2724, 2958
BstXI	CCANNNNNNTGG	8 cut(s)	22, 1768, 2380, 5937, 6353, 7007, 7532, 7731
BstZ17I	GTATAC	1 cut(s)	1698
Bsu15I	ATCGAT	2 cut(s)	3468, 3922
Bsu36I	CCTNAGG	2 cut(s)	1065, 7376
BsuI	GTATCC	1 cut(s)	1698
BsuTUI	ATCGAT	2 cut(s)	3468, 3922
BtgI	CCRYGG	6 cut(s)	285, 361, 1026, 1874, 7779, 8288
BtgZI	GCGATG	1 cut(s)	7287
BtsI	GCAGTG	2 cut(s)	1493, 4860
BveI	ACCTGC	4 cut(s)	3146, 5544, 5805, 6270
CaiI	CAGNNNCTG	4 cut(s)	569, 2714, 4342, 6965
CciI	TCATGA	2 cut(s)	1812, 3952
CfoI	GCGC	4 cut(s)	11, 239, 4710, 7611
Cfr10I	RCCGGY	3 cut(s)	421, 3679, 4500
Cfr42I	CCGCGG	1 cut(s)	288
ClaI	ATCGAT	2 cut(s)	3468, 3922
CseI	GACGC	2 cut(s)	5619, 6470
CspAI	ACCGGT	1 cut(s)	4500
CspCI	CAANNNNNGTGG	2 cut(s)	6890, 6925
DraI	TTTAAA	5 cut(s)	612, 1569, 2241, 4222, 6555
DrdI	GACNNNNNNGTC	1 cut(s)	1669
DriI	GACNNNNNGTC	1 cut(s)	2962
DseDI	GACNNNNNNGTC	1 cut(s)	1669
EaeI	YGGCCR	4 cut(s)	12, 132, 3129, 4329
Eam1104I	CTCTTC	4 cut(s)	83, 2439, 2811, 5832
Eam1105I	GACNNNNNGTC	1 cut(s)	2962
EarI	CTCTTC	4 cut(s)	83, 2439, 2811, 5832
EciI	GGCGGA	2 cut(s)	2465, 6243
Ecl136II	GAGCTC	4 cut(s)	160, 494, 2113, 4074
Eco105I	TACGTA	2 cut(s)	2412, 5297
Eco147I	AGGCCT	2 cut(s)	4202, 4367
Eco24I	GRGCYC	5 cut(s)	162, 496, 2115, 4076, 4171
Eco31I	GGTCTC	3 cut(s)	1655, 3638, 5087
Eco32I	GATATC	3 cut(s)	960, 1655, 7231
Eco47I	GGWCC	8 cut(s)	843, 1295, 1878, 2995, 4498, 5035, 6506, 7776
Eco47III	AGCGCT	1 cut(s)	7610
Eco53kI	GAGCTC	4 cut(s)	160, 494, 2113, 4074
Eco72I	CACGTG	1 cut(s)	7532
Eco81I	CCTNAGG	2 cut(s)	1065, 7376
Eco91I	GGTNACC	1 cut(s)	7805
EcoICRI	GAGCTC	4 cut(s)	160, 494, 2113, 4074
EcoNI	CCTNNNNNAGG	1 cut(s)	5113
EcoO109I	RGGNCCY	4 cut(s)	4167, 4168, 5106, 6506
EcoO65I	GGTNACC	1 cut(s)	7805
EcoRI	GAATTC	1 cut(s)	1776
EcoRV	GATATC	3 cut(s)	960, 1655, 7231
EcoT22I	ATGCAT	7 cut(s)	505, 1539, 1682, 1931, 3600, 6758, 8022
EcoT38I	GRGCYC	5 cut(s)	162, 496, 2115, 4076, 4171
Esp3I	CGTCTC	2 cut(s)	3371, 5918
FaqI	GGGAC	5 cut(s)	257, 829, 1003, 4511, 6697
FauI	CCCGC	2 cut(s)	3921, 5760
FauNDI	CATATG	2 cut(s)	3317, 6580
FbaI	TGATCA	4 cut(s)	3100, 5590, 7048, 7618
FblI	GTMKAC	3 cut(s)	1697, 2408, 5047
FriOI	GRGCYC	5 cut(s)	162, 496, 2115, 4076, 4171
GlaI	GCGC	4 cut(s)	10, 238, 4709, 7610
GsaI	CCCAGC	2 cut(s)	7148, 7442
GsuI	CTGGAG	4 cut(s)	1225, 3605, 6157, 7668
HaeII	RGCGCY	1 cut(s)	7612
HapII	CCGG	7 cut(s)	348, 422, 3680, 4501, 5343, 6886, 7390
HgaI	GACGC	2 cut(s)	5619, 6470
HhaI	GCGC	4 cut(s)	11, 239, 4710, 7611
Hin1I	GRCGYC	2 cut(s)	213, 927
Hin6I	GCGC	4 cut(s)	9, 237, 4708, 7609
HinP1I	GCGC	4 cut(s)	9, 237, 4708, 7609
HincII	GTYRAC	4 cut(s)	2825, 3112, 4183, 6663
HindII	GTYRAC	4 cut(s)	2825, 3112, 4183, 6663
HindIII	AAGCTT	7 cut(s)	261, 764, 1868, 2880, 3074, 5379, 6288
HpaI	GTTAAC	1 cut(s)	6663
HpaII	CCGG	7 cut(s)	348, 422, 3680, 4501, 5343, 6886, 7390
Hpy99I	CGWCG	6 cut(s)	215, 218, 272, 7337, 7452, 8229
Hsp92I	GRCGYC	2 cut(s)	213, 927
HspAI	GCGC	4 cut(s)	9, 237, 4708, 7609
KroI	GCCGGC	1 cut(s)	421
KroNI	GCCGGC	1 cut(s)	423
Ksp22I	TGATCA	4 cut(s)	3100, 5590, 7048, 7618
KspAI	GTTAAC	1 cut(s)	6663
KspI	CCGCGG	1 cut(s)	288
MfeI	CAATTG	4 cut(s)	1365, 1910, 6162, 6222
MhlI	GDGCHC	9 cut(s)	162, 496, 1495, 2115, 4076, 4171, 6143, 7524, 7744
MlsI	TGGCCA	3 cut(s)	134, 3131, 4331
MluNI	TGGCCA	3 cut(s)	134, 3131, 4331
Mox20I	TGGCCA	3 cut(s)	134, 3131, 4331
Mph1103I	ATGCAT	7 cut(s)	505, 1539, 1682, 1931, 3600, 6758, 8022
MroNI	GCCGGC	1 cut(s)	421
MroXI	GAANNNNTTC	8 cut(s)	1776, 2448, 2679, 3015, 5206, 6849, 6992, 7824
MscI	TGGCCA	3 cut(s)	134, 3131, 4331
Msp20I	TGGCCA	3 cut(s)	134, 3131, 4331
MspCI	CTTAAG	3 cut(s)	1145, 1597, 7220
MspI	CCGG	7 cut(s)	348, 422, 3680, 4501, 5343, 6886, 7390
MunI	CAATTG	4 cut(s)	1365, 1910, 6162, 6222
Mva1269I	GAATGC	4 cut(s)	1629, 2585, 4235, 4387
MvnI	CGCG	6 cut(s)	11, 237, 287, 377, 1613, 7272
NaeI	GCCGGC	1 cut(s)	423
NciI	CCSGG	3 cut(s)	348, 5344, 7390
NcoI	CCATGG	5 cut(s)	361, 1026, 1874, 7779, 8288
NdeI	CATATG	2 cut(s)	3317, 6580
NgoMIV	GCCGGC	1 cut(s)	421
NheI	GCTAGC	3 cut(s)	3187, 3683, 8131
NmeAIII	GCCGAG	1 cut(s)	2504
NmuCI	GTSAC	8 cut(s)	604, 923, 1671, 2018, 2309, 5447, 5464, 7805
NsiI	ATGCAT	7 cut(s)	505, 1539, 1682, 1931, 3600, 6758, 8022
NspV	TTCGAA	2 cut(s)	73, 2941
OliI	CACNNNNGTG	2 cut(s)	2846, 7530
PaeI	GCATGC	4 cut(s)	1950, 3602, 5524, 6760
PagI	TCATGA	2 cut(s)	1812, 3952
PaqCI	CACCTGC	2 cut(s)	5544, 5805
PasI	CCCWGGG	1 cut(s)	4171
PceI	AGGCCT	2 cut(s)	4202, 4367
PciI	ACATGT	5 cut(s)	1273, 1855, 3694, 5059, 5442
PctI	GAATGC	4 cut(s)	1629, 2585, 4235, 4387
PdiI	GCCGGC	1 cut(s)	423
PdmI	GAANNNNTTC	8 cut(s)	1776, 2448, 2679, 3015, 5206, 6849, 6992, 7824
PflFI	GACNNNGTC	1 cut(s)	2262
PflMI	CCANNNNNTGG	1 cut(s)	6742
PfoI	TCCNGGA	2 cut(s)	346, 6947
PinAI	ACCGGT	1 cut(s)	4500
PmaCI	CACGTG	1 cut(s)	7532
PmlI	CACGTG	1 cut(s)	7532
Ppu21I	YACGTR	4 cut(s)	2412, 5161, 5297, 7532
PpuMI	RGGWCCY	1 cut(s)	6506
PscI	ACATGT	5 cut(s)	1273, 1855, 3694, 5059, 5442
PshAI	GACNNNNGTC	2 cut(s)	2993, 8054
PshBI	ATTAAT	2 cut(s)	2559, 8231
PsiI	TTATAA	1 cut(s)	2030
Psp124BI	GAGCTC	4 cut(s)	162, 496, 2115, 4076
Psp1406I	AACGTT	1 cut(s)	6108
Psp5II	RGGWCCY	1 cut(s)	6506
PspCI	CACGTG	1 cut(s)	7532
PspEI	GGTNACC	1 cut(s)	7805
PspFI	CCCAGC	2 cut(s)	7144, 7438
PspOMI	GGGCCC	1 cut(s)	4167
PspPPI	RGGWCCY	1 cut(s)	6506
PstI	CTGCAG	6 cut(s)	574, 5083, 5664, 5749, 6411, 7771
PstNI	CAGNNNCTG	4 cut(s)	569, 2714, 4342, 6965
PsyI	GACNNNGTC	1 cut(s)	2262
PvuII	CAGCTG	7 cut(s)	1088, 2756, 3664, 4322, 5253, 6962, 7727
SacI	GAGCTC	4 cut(s)	162, 496, 2115, 4076
SacII	CCGCGG	1 cut(s)	288
ScaI	AGTACT	4 cut(s)	3565, 6462, 6804, 8010
SduI	GDGCHC	9 cut(s)	162, 496, 1495, 2115, 4076, 4171, 6143, 7524, 7744
Sfr303I	CCGCGG	1 cut(s)	288
SfuI	TTCGAA	2 cut(s)	73, 2941
SgrBI	CCGCGG	1 cut(s)	288
SinI	GGWCC	8 cut(s)	843, 1295, 1878, 2995, 4498, 5035, 6506, 7776
SmiI	ATTTAAAT	1 cut(s)	6555
SnaBI	TACGTA	2 cut(s)	2412, 5297
SphI	GCATGC	4 cut(s)	1950, 3602, 5524, 6760
SseBI	AGGCCT	2 cut(s)	4202, 4367
SspI	AATATT	2 cut(s)	1471, 6449
SstI	GAGCTC	4 cut(s)	162, 496, 2115, 4076
StuI	AGGCCT	2 cut(s)	4202, 4367
SwaI	ATTTAAAT	1 cut(s)	6555
TaqII	GACCGA	2 cut(s)	2328, 7824
TatI	WGTACW	9 cut(s)	1228, 1739, 2488, 3235, 3563, 3757, 6460, 6802, 8008
TauI	GCSGC	4 cut(s)	14, 377, 4138, 7144
TseFI	GTSAC	8 cut(s)	604, 923, 1671, 2018, 2309, 5447, 5464, 7805
Tsp45I	GTSAC	8 cut(s)	604, 923, 1671, 2018, 2309, 5447, 5464, 7805
TspGWI	ACGGA	7 cut(s)	419, 1189, 2202, 4949, 7000, 7338, 7759
Tth111I	GACNNNGTC	1 cut(s)	2262
Van91I	CCANNNNNTGG	1 cut(s)	6742
Vha464I	CTTAAG	3 cut(s)	1145, 1597, 7220
VpaK11BI	GGWCC	8 cut(s)	843, 1295, 1878, 2995, 4498, 5035, 6506, 7776
VspI	ATTAAT	2 cut(s)	2559, 8231
XagI	CCTNNNNNAGG	1 cut(s)	5113
XbaI	TCTAGA	1 cut(s)	4547
XcmI	CCANNNNNNNNNTGG	3 cut(s)	6244, 6789, 7007
XmaJI	CCTAGG	1 cut(s)	6509
XmiI	GTMKAC	3 cut(s)	1697, 2408, 5047
XmnI	GAANNNNTTC	8 cut(s)	1776, 2448, 2679, 3015, 5206, 6849, 6992, 7824
ZraI	GACGTC	2 cut(s)	214, 928
ZrmI	AGTACT	4 cut(s)	3565, 6462, 6804, 8010
Zsp2I	ATGCAT	7 cut(s)	505, 1539, 1682, 1931, 3600, 6758, 8022

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.