Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0004721

Physical Location & Seq

Genomic Coordinates Reverse (-)

24986567 .. 24999378

Gene Structure 12812 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1126600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 8193 bp

ATGGCGAACCTGTCAAGCCTCGTCCACGAGCTCCGAGAGCGCATAGCGGCCTCCTCCACTCCTCCTAGCAACCGTTACGACGACGACTTGGTGATCCGATTCCGCGCCGTCCTCCCTGACCTCCTCCGCGCCTCCGTCGTTCCATCTCCCTCAGCGAACGAGCGAGAAGTGATAGCTGTATTGAAGCTCATCGTTATCACTGCTAGGCATTTGCCCGGAGTTTTCTATCATGGTAAGGCCACCGCAATTCTTCCTCTGCTCGGTCGCATATTGCCTTTCTTCGCAGAGCCGTCGTTCCGGCATGGAGTAATATTTGAGACTGTTGGACCACTTTTAGCGCTACTTCGTACTGGAGAACGGGATGCCTACCGTCAATTTTTCATTGATTCCATGCTTGTTGTTCGAGATATTTTGTGTATGGCATCAGTCTGTGCAGACGCTTCAAATATTACGGATTCGACGAAATTGACTTTAAGGTGTTTTTGTGAGTCCTTCAATGGAATTTTTGATGACCCTGATCATCTTGGGGATCTTCCGGCAAGTAATAAACCGGATGATGGGATTGGTGTCTTGATTAACCTTACGGGCAAAACAAGGTGGCAACCTTTTGCAACCTGGATGATAAAACTTCTTGGTAAATGCTTAACCGAAGGAACTCTGTATGTGGAAGGACTCATTAATGTGCCTTTTGTTCTGGATGCATGTTCCCTCTTATGTTATGGGGATGCTGATTTGCAGATGGCATGTTTTGAATTTGCACGTGTTGTTGGATCAGGGATAAATTATGACATCCTTCCTCACCAGAATATTATTCAGTCGATATCAACTATCTTAAGGGAGGACAAAGAGGGGTTTCCTGTGCTCAGAAACATCGTTTATGATTCGTCCTTGGGTGGTTGCCTTGATGCATTACACTGTAATTGCCCTGAAGATGTTGTTGAGCTAACAGCTGCCGATTTATTAGACGTCTTTTCTCATTCAATGGGGAGAACTAAAAGCCAGGAGCTTAAGGTTGCGCTGTGCAATGCATACATACGGATTGCAAAAATATGCCCACCTAATATCTGGAGGCCAGAATCTCTCCTTTATGTGCTTTCTTATCCAGAACCCTGCTTCTCCTTGATAGATTGCCTACAAGTAGCTCTCTCTATACTTGGTCCCAATCTTGTTGGATGGAGAATTACAAACAGTAACTGTCAGAGTTTATCATCACTAAGTGACAAATCAAATGAAAACTTGAGGGTTGGAGAAAAAAGGCCTATAGAGGATTTGGACACTTTCAAGAATAAACGGCAAAAGGTAGATGAAGATATTATGAGTTTGCATTCTAATATTCAGGGGGAGCACAAGCTTACTCATACAGTTGCTTGTGAAAGGGAGAATTATGCAGATTATATGCATGAATCGGTACTTTCTTTTGTTGAATCTTTAGAACCTCCTGGTGTCCATCCTGATTCTTTAAGACCAGATGCCGCATTAAGAGCTGTTAGCATGCTTTGCATTGCCTTCTGTAGCTATCCAGAGACCAATCTGTCACTAAGCATCTTTCGTCAGATGTACGCATGGATGCCATGGGTATTCCAGCAGGCAAAGCAAGGAATTTCAGTTGCACTTGATATTTCCATCTACCTGGAAGGAATTCACAGCATGCTGCTTTTGCAGAGTCCCTTAATGATGGAGAGTATGGGGTTCAAAAATAAGAATGTTGCTGCAGACCTTGTGTACATCCTAAAGCTTCCGTGGACCTATCCTCGTGTAGTTCCTGATCCACATCCTCTGTGGAAACTTAAATGCATCTCTGTTCAAGTTGCATGCAAACTTGGTAATATAACAAGTACTGAAACTCAGCTTGAAGTCCTGGATTTGAGCCTTCATGATGAATTTGAAGAACTTATTATTGAAGCTATAATCTCGATGCCTATGATTGTCATGTGGTCTGGTGTCAGTTGGCTGCCACATATATCAAGAAGGCTTGTTGAGTACTTGGCGGGAGAGAGAAGTGAGAAGGTTAAGAATATTATTCCCTCTTCTCTTGGTTTTTTGTCATGCCTGTTTGGTTCTTGTAATGATGGAGATGGTATGAATAGAAGTCGGTGCAAATTAGTTTTAAATATGAATAATGAGAAACGTAGCCAAACAGTGGATTATCTTCTGCAAGGATTCTGGTGTTCAGAGTGTGACAAAAGTGTTCAACTCAATACCTCATGTTCAAAAGTGATATATCCACCTGATATGCACAACAGAGAAACGAGTTTGGATTGTGATTTTGCCCATCTGCAGTCTCTGTTTCTCAAACTTCTTTATGATGAATCGTCAGAGGAGGTCCAAGTTGCTTGTGTGAAAAATATTCGCCGAATATTTGTACATGGGAGCATAAGGAATCTGATTGTGTCTAGATTTGAATGGATTAAATGTGTTGAATATTTACTCCTTCATGGGAAGAAGGCTGTAAGGGATGCATTCTGCACTCAGATTAGTTCATTCCTTGAGGATTCTTTTTTGAGCTGCTTATTTCCTGATGAGGATGCATCAAATAAAAGTAAAGAACAAGAGTTTTTTAACATAATGAAGCATGCCTTTTCAGAAACTAAGGATCCCCAAATCTTTGAGACTCTTTTGGAATCTACAGCAGAAATAATGATTGCAGTTGACATTCACAGTCAATTGTTCTTGTTTTCTGTTTTATTGTTGGTTGATCAGCTTGATAATCCACACATGACAGTGAGACTGATGGCATCAAAGTTGATAAAGAAATCTTGCTACTTTCATCTTAAAGGAGGATTTGAACTAATCCTTTCGAAAGTTGTTCATGTTCGAAATGAACTATTTGATTTTTTATCTGTGAGGTTGTCTAGCCGTCCAATTATGGTCAAAGAGTTTACAGAATCCGTTCTTGGTATTGCAACAGAAGAACTTGTCAAGCAAATGATTCCTACTGTTCTTCCGAAACTTGTAGTGTCTCAGCAGGATGATGATCAAGCACTTGAAACATTATATGAACTGGCCAAGTGTTTAAACACTGATTTGGTGCCTCTTATAGTTAATTGGCTACCAAAAGTGCTAGCCTTTGCTCTCCATCGAGCAGATGCACGAGAGTTAGTTGTTGCTTTGCAGTTTTACCATACGCAGACTGGTTCTGACAAACAAGAAATCTTCGCAGCTGCATTACCTGCCCTGTTGGACGAACTCATATGCTTTTTAGATGGAGGTGATTCAGATGAGATAAACAGAAGGTTAGCAAGAGTTCCTGAGATGATAAAAGAGGTTGCTAGAGTTCTGACTGGTGGTGAAGATCTTCCAAGCTTTTTGAGGAATCATTTTGTTGGCCTTCTTAATAGTATTGACAGAAAGATGCTCCATGCAGAAGACATTTCATTACATAAACAAGCCTTACAACGTATTGAGATGCTGATGAAAATGATGGGTGCTCACCTTACTACTTATGTGCCTAAACTGATGGTTCTTCTCATGCATGCTATTGGTAAAGAAGCCCTCCAGAGTGAGGGTCTTTCTGTACTGCATTTTTTCATTGTGCAGCTGGTAAAAGTATCGCCAGATAGCACCAAACATGTAATCTCTCAAGTTTTTGCTGCCCTTATTCCTTTTTTGGAGAGACAAGACGAAATTCCTATACATCTAGATAAAGTGGTAAACATTTTGGAAGAACTTGTACTAAATAACAGGGCCGTTCTAAAGCTGCATATACGCGAGTTCCCTCCGTTGCCCAGCATTTCAGCTCTAATAGAAGTGAACAAAGCTATAGAAGAAGTGCGAGGGTCAATGAAATTGAAGGATCGATTGCGTGATGTCGTTGATGGTTTGAATCATGAGAGCTTAAATGTGAGATATATGGTACTTTGTGAGTTGAGCAAGTTGCTGACCCTGAAACAGGAAGAGGTTACAGCTCTAATAACTGCTGAAGGTGGTACAGATATGGATATTTTGAGTTCTTTAATTACATCCTTACTAAGAGGATGCGCAGAAGAATCAAGGACCGCAGTTGGACAGCGGCTGAAGTTGGTCTGTGCTGATTGCCTTGGGGCCCTGGGTGCGGTTGATCCTGCTAAACTGAAAGGATTTTCATGCCAACGCTTTAAAATTGAATGCTCCGATGATGACCTTATATATGAGTTAATTCACAAGCACCTTGCAAGGGCTTTTAGAGCTGCACCTGACACTGTAATTCAAGACTCAGCTGCATTGGCTATACAGGAACTGTTAAAGATTGCAGGTTGTGAGGCCTCTTTAGATGAGAATGCTTCTTCATCCACGTCAGAGACTCCAAAGGGCAAAGAGCCTTTAAATGTTACTGCATCTGGGATTAAGGGTACTGATGGTAGCAGTGAGATGAATAGAAGGGGTCAGAGATTATGGGATAGATTCTCCAATTATGTTAAAGAGATAATTGCCCCTTGCTTAACCTCTAGGTTTCAACTTCCCAATTTTGCTGATTCTTCATTTGTTGGCCCAATTTACAGGCCATCTATGTCATTCAGGAGATGGATATTCTCCTGGATAAGAAAGTTGACTGCACATGCCACTGGTTCTCGTAGCAGCATTTTCAATTCCTGTCGAGGTATTGTGCGTCATGATATGCAGACAGCAATATATCTGCTTCCATATCTGGTTCTTAATGCTGTTTGTCATGGCACGTCGGAGGCACGTCATGGCATAACAGAAGAAATCCTACATGTTCTTGATGTTGCAGCATCTGATAACAGTGGGGATGGAGCTCATGGAGTGAAGGGTGGGAAAATTGAAGTTTGCATTCAAGCTGTGTTCACTCTCCTTGATAATCTTGGTCAATGGGTGGATGACATTAAACAAGAATTAGCTCTTTCCCAGGCTTCTCAATCACTGGCTTCTAAGCAACAAGCATCCAAGACAAAGGATCAAACTCGTAACTCTTCTGCAGATCAGGAGCATCTCCTTGTACAATGTAAATATGTTTCAGAACTGTTGTCAGCAATTCCTAAGGTAACCCTTGCCAGGGCCTCCTTCAGGTGCCAGGCTTATGCAAGGTCTTTAATGTACTTTGAGTCATACGTGAGGGGAAAGTCAGGTTCTTTCAACCCTGCATCTGATAAAAGTGGCATCTTTGATGATGAAGATATTTCATATCTAATGGAAATATACAGCTGCCTAGATGAGCCTGATGGCCTTTCTGGCTTTGCATGTTTACGTAAATCTATGGGATTACAATTACAGGACCAGCTCTTAATAAACAAAAAAGCGGGAAACTGGGCAGAGGCTTTAACTTCTTGTGAACAAGCTTTGCAAATGGAACCAACATCAGTTCAAAGGCATTCTGATGTCCTTAACTGTTTGTTAAACATGTGTCACCTTCAGGCAATGGTTACTCATGTGGATGGCTTAATCTCTAGGGTTCCCCAGTACAGGAAAACATGGTGCATGCAAGGTGTGCAGGCAGCATGGAGGCTAGGCAGGTGGGATTTGATGGATGAATATCTTAGTGGAGCTGATGAAGAAGGTCTACTTTGTAGCAGTTCTGAAAGTAATGCCTCATTTGATATGGATGTTGCAAAGATTCTACAGGCAATGATGAAGAAGGATCAGTTCTCAGTTGCTGAAAAAATTGCCCTCTCAAAGCAAGCGCTCATTGCTCCTCTCGCTGCTGCAGGCATGGATTCCTATGTACGGGCCTACCCATTTGTTGTAAAACTTCACCTTCTACGGGAGCTTGAGGACTTTCACTCTCTTCTTGTTGATGATTCTTTCTTGGAGAAATCATTTCAACTGGGTGATCATGGGTTCTCCCAGTTGATGGAGAACTGGGAAAACCGTCTCAGGTTTACACAGCCGTCACTCTGGGCAAGAGAGCCACTTTTGGCCTTCCGCAGACTAGTTTTTGCTGCCAGTGCTTTGGGTGCTCAAGTTGGGAACTGCTGGCTTCAATATGCAAAACTCTGTCGCATGGCTGGTCATTATGAGACAGCAAACCAGGCGATTCTAGAAGCTCAAGCTACAGGTGGACCTAATGTTCACATGGAGAAGGCTAAACTTCTATGGAGCACCCGGCGATCTGATGGTGCCATTGCACAGTTGCAGCAGTCTCTCCTGAACATGCCTGTAGAGATTGTTGGTTCCTCTGCAATTTCATCAATTACTAGTCTTTCACTGGTTCCACTGAACCAGCCGCTGTTAGTTTGTGATACTCAAGCTTTGAATGAGAATCGAGATATCGCAAAGACCCTACTCCTCTATACTAGGTGGATCCAACACACTAGACAAAAGCAGAAAGAAGATGTATTATGTCTTTATACGAGGGTGAGGGAACTGCAGCCCAAGTGGGAGAAAGGATATTTCTACATTGCTAAGTATTGTGAGGAGTTGCTTGCTGATGCCAGGAAACGCCAGGAAGAAAACATAGAACTTAGTGCAAGGAAAATGCCATCAAATAGTGCTATTGTTGGTTCTCCAAATTTAAGCACTGAGAAGCCTTGGTGGTCGTATGTACCTGATGTACTGTTATTTTATGCAAGGGGGCTTCTTAAGGGTCACAAAAATCTCTTTCAAGCACTTCCAAGATTGTTAACCCTATGGTTTGACTTTGGAAGTATGTATCTAACATGTGGCACAGCTTCCAGTAAAGAGTTGAAAAAAACTCATGAGAAGGTAATAAAAATCATGCAAGGATGTTTGAAGGATTTGCCAACGTACCAGTGGTTAACAGTACTACCACAATTGGTTTCCAGAATTTGCCACCAGAATGAGGAAGTTGTTCGATTGGTCAAAAACATAATAACAACTGTTCTCCGGCAATACCCACAACAAGCGCTCTGGATTATGGCGGCAGTTTCAAAATCAACTGTTCCTTCAAGGCGGGAGGCAGCTGCAGAAATCCTACAGGCTGCACGAAAAGGGTTTAGCCAAGGAAATACTGGTAGCAATCTATTTGTTCAGTTTGCAAGTCTGATTGATCACTTAATTAAGTTGTGCTTCCATCCTGGTCAGTCAAAGGCAAAAGCGATTAATATCTCAACTGAATTTAGTGCCTTAAAGAGGATGATGCCCCTGGGAATTATCATGCCAATTCAGCAGTCTCTAACTGTTAGCCTACCAACGTATGACGGGAAGCTCAGTGACTCACTTAGATCTGATATTTTTTCGGCGACTGATCTTCCTACAATATCAGGAATTGGTGATGAGGCTGAGATTCTTTCATCTCTTCAACGGCCTAAAAAAATTGTTTTATTAGGCAGTGATGGCATTGAACGCCCATTCCTTTGCAAACCCAAGGATGACCTTAGGAAAGATGCCCGCATGATGGAGTTCACTGCAATGATAAACCGTTTGCTGTCTAAATACCCAGAAAGCCGTCTGAGGAAACTCTACATTCGCACCTTTGCGGTAATTCCTTTGACAGAGGACTGTGGTATGATAGAATGGGTGCCTCACACTCGTGGACTTCGGCATATACTTCAAGACATATATATAAACTGTGGAAAATTTGATAGGCAAAAGACAAATCCTCATATCAAACGGATTTATGATCAATGCCAAGGTAAAATACTAGAAGATGTGATGCTGAAGGACAAAATTCTTCCAATGTTCCCCCCAGTATTCCATAAATGGTTCTTGACCACTTTTTCTGAGCCAGCTGCTTGGTTTAGGGCTCGGATTGCTTATGCACATACCACTGCAGTTTGGTCCATGGTTGGCCATATTGTAGGGCTGGGTGATAGACACGGTGAAAACATTCTTTTTGATTCTACAACAGGAGACTGTGTTCATGTTGATTTCAGTTGCTTATTTGACAAAGGCTTGCAGTTGGAGAAGCCTGAGCTGGTGCCTTTCAGGTTGACTCAGAATATGATTGATGGCTTGGGCATCACTGGTTATGAGGGAATCTTTTTGAGGGTCTGTGAAATCACACTTTCAGTACTGAGGATGCATAGGGAGACTTTAATGAGCGTTCTTGAAACTTTCATCCATGATCCTCTTGTGGAATGGACAAAATCACACAAGTCCAGTGGAGTAGAAGTTCAGAATCCACATGCACAGCGAGCAATCAGTAACATTGAGGCAAGGTTGCAAGGAGTAGTTGTTGGTGTCGGAGCGGCACCATCTTTGCCACTGGCCGTAGAAGGTCAGGCTCGTCGATTAATAGCTGAAGCAGTCGCCCACAAAAATCTTGGAAAGATGTATATCTGGTGGATGCCTTGGTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000723 GO:0000726 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005911 GO:0006139 GO:0006259 GO:0006278 GO:0006281 GO:0006282 GO:0006302 GO:0006303 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007004 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009506 GO:0009628 GO:0009987 GO:0010035 GO:0010038 GO:0010044 GO:0010212 GO:0010332 GO:0010833 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0022414 GO:0030054 GO:0031323 GO:0031347 GO:0032200 GO:0032204 GO:0032501 GO:0032504 GO:0033043 GO:0033044 GO:0033554 GO:0034641 GO:0034645 GO:0034654 GO:0042221 GO:0042592 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043247 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0046483 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051128 GO:0051171 GO:0051276 GO:0051321 GO:0051716 GO:0055044 GO:0060249 GO:0060255 GO:0065007 GO:0065008 GO:0071704 GO:0071840 GO:0071897 GO:0080090 GO:0080134 GO:0080135 GO:0090304 GO:1901360 GO:1901362 GO:1901576 GO:2001020

KEGG Pathways

Metabolic & Signaling

ko03460 ko04110 ko04115 ko04214 ko04218 ko05165 ko05166 map03460 map04110 map04115 map04214 map04218 map05165 map05166

Pfam Domains

Protein Families

FAT FATC PI3_PI4_kinase UME

Protein Analysis

2731

Amino Acids

306.81

Weight (kDa)

6.34

Isoelectric Point (pI)

49.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UME	PF08064	1102 - 1202	1.2e-17	UME (NUC010) domain
M-HEAT_ATR	PF25030	1490 - 1725	1.8e-33	Serine/threonine-protein kinase ATR, M-HEAT region
FAT	PF02259	1807 - 2186	5.4e-55	FAT domain
HEAT_ATR	PF23593	2212 - 2312	1.1e-32	Serine/threonine-protein kinase ATR-like, HEAT repeats
PI3_PI4_kinase	PF00454	2414 - 2659	6.9e-54	Phosphatidylinositol 3- and 4-kinase
FATC	PF02260	2699 - 2730	1e-11	FATC domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0004721)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G40820 AT5G40820 AT5G40820 AT5G40820
fragaria_vesca	FvH4_2g15770 FvH4_2g15770 FvH4_2g15770 FvH4_2g15770 FvH4_2g15770
malus_domestica	MD05G1126600.v1.1
prunus_persica	Prupe.8G170300_v2.0.a1 Prupe.8G170300_v2.0.a1 Prupe.8G170300_v2.0.a1 Prupe.8G170300_v2.0.a1 Prupe.8G170300_v2.0.a1 Prupe.8G170300_v2.0.a1 Prupe.8G170300_v2.0.a1 Prupe.8G170300_v2.0.a1
pyrus_communis	pycom05g12250 pycom10g11100 pycom10g11110
rosa_chinensis	RchiOBHm_Chr6g0279121
rosa_laevigata	RLG00000013166
rosa_multiflora	Rmu_sc0014203.1_g000022
rosa_roxburghii	Rroxscaffold_7G00189110
rosa_rugosa	Rorug06G0122400
rosa_samantha	Rh6AG231100 Rh6BG236000 Rh6CG238100 Rh6DG229700
rosa_wichuraiana	Rw6G020240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	5436
AasI	GACNNNNNNGTC	1 cut(s)	1531
AatII	GACGTC	1 cut(s)	969
Acc16I	TGCGCA	1 cut(s)	3979
Acc36I	ACCTGC	3 cut(s)	3178, 4220, 5436
AccB1I	GGYRCC	6 cut(s)	3028, 5004, 6050, 7411, 7810, 8083
AccB7I	CCANNNNNTGG	2 cut(s)	2140, 5785
AccBSI	CCGCTC	1 cut(s)	8081
AccI	GTMKAC	1 cut(s)	5494
AccII	CGCG	3 cut(s)	105, 129, 3708
AcoI	YGGCCR	3 cut(s)	3003, 7681, 8100
AcuI	CTGAAG	7 cut(s)	948, 3939, 4034, 4984, 5330, 7571, 8154
AcvI	CACGTG	1 cut(s)	761
AcyI	GRCGYC	1 cut(s)	966
AdeI	CACNNNGTG	1 cut(s)	1217
AfeI	AGCGCT	3 cut(s)	339, 5616, 6798
AflII	CTTAAG	3 cut(s)	832, 1007, 6512
AflIII	ACRYGT	5 cut(s)	760, 3568, 4690, 5334, 6590
AhlI	ACTAGT	2 cut(s)	5863, 6128
AjiI	CACGTC	3 cut(s)	4272, 4653, 4664
AjuI	GAANNNNNNNTTGG	2 cut(s)	2877, 2909
AleI	CACNNNNGTG	1 cut(s)	7422
AloI	GAACNNNNNNTCC	8 cut(s)	5985, 6017, 7227, 7259, 7734, 7766, 7989, 8021
Alw21I	GWGCWC	7 cut(s)	33, 864, 1347, 3430, 4735, 5893, 6035
AlwNI	CAGNNNCTG	7 cut(s)	1194, 2284, 4012, 4216, 4712, 5588, 6160
Aor51HI	AGCGCT	3 cut(s)	339, 5616, 6798
ApaI	GGGCCC	1 cut(s)	4045
AseI	ATTAAT	3 cut(s)	678, 6993, 8126
Asp700I	GAANNNNTTC	5 cut(s)	1638, 2889, 3294, 6741, 7719
AspLEI	GCGC	8 cut(s)	42, 107, 131, 340, 1018, 3980, 5617, 6799
AsuC2I	CCSGG	2 cut(s)	216, 6037
AsuII	TTCGAA	2 cut(s)	2798, 2815
AsuNHI	GCTAGC	1 cut(s)	3061
AvaII	GGWCC	8 cut(s)	326, 1157, 1743, 2323, 3993, 5209, 5993, 7671
AxyI	CCTNAGG	2 cut(s)	4974, 7268
BaeGI	GKGCMC	1 cut(s)	4045
BalI	TGGCCA	2 cut(s)	3005, 7683
BamHI	GGATCC	2 cut(s)	2593, 6234
BanI	GGYRCC	6 cut(s)	3028, 5004, 6050, 7411, 7810, 8083
BanII	GRGCYC	4 cut(s)	33, 4045, 4735, 7639
BarI	GAAGNNNNNNTAC	6 cut(s)	3654, 3686, 4671, 4703, 5478, 5510
BauI	CACGAG	4 cut(s)	26, 1752, 3090, 7422
BbrPI	CACGTG	1 cut(s)	761
BbsI	GAAGAC	1 cut(s)	3372
Bbv12I	GWGCWC	7 cut(s)	33, 864, 1347, 3430, 4735, 5893, 6035
BbvCI	CCTCAGC	1 cut(s)	151
BceAI	ACGGC	9 cut(s)	92, 274, 1307, 2841, 3671, 5806, 7211, 7323, 8087
BcgI	CGANNNNNNTGC	2 cut(s)	273, 307
BclI	TGATCA	6 cut(s)	517, 2695, 2974, 5764, 6940, 7513
BcnI	CCSGG	2 cut(s)	216, 6037
BcuI	ACTAGT	2 cut(s)	5863, 6128
BfoI	RGCGCY	3 cut(s)	341, 5618, 6800
BfrI	CTTAAG	3 cut(s)	832, 1007, 6512
BfuAI	ACCTGC	3 cut(s)	3178, 4220, 5436
BglI	GCCNNNNNGGC	1 cut(s)	5166
BglII	AGATCT	2 cut(s)	3292, 7115
BmcAI	AGTACT	4 cut(s)	1837, 1982, 6696, 7905
Bme18I	GGWCC	8 cut(s)	326, 1157, 1743, 2323, 3993, 5209, 5993, 7671
BmgBI	CACGTC	3 cut(s)	4272, 4653, 4664
BmrI	ACTGGG	6 cut(s)	5251, 5386, 5768, 5773, 5803, 7574
BmtI	GCTAGC	1 cut(s)	3065
BmuI	ACTGGG	6 cut(s)	5251, 5386, 5768, 5773, 5803, 7574
BpiI	GAAGAC	1 cut(s)	3372
BpmI	CTGGAG	3 cut(s)	372, 1087, 3479
Bpu10I	CCTNAGC	2 cut(s)	151, 7803
Bpu14I	TTCGAA	2 cut(s)	2798, 2815
BpuEI	CTTGAG	7 cut(s)	1258, 2507, 3564, 5723, 5877, 5964, 6162
BpuMI	CCSGG	2 cut(s)	216, 6037
Bsa29I	ATCGAT	1 cut(s)	3796
BsaAI	YACGTR	3 cut(s)	761, 5047, 5183
BsaBI	GATNNNNATC	5 cut(s)	1770, 2973, 5466, 6995, 8168
BsaHI	GRCGYC	1 cut(s)	966
BsaI	GGTCTC	1 cut(s)	1517
BsaWI	WCCGGW	1 cut(s)	550
BsaXI	ACNNNNNCTCC	6 cut(s)	7734, 7764, 7989, 8019, 8052, 8082
Bse21I	CCTNAGG	2 cut(s)	4974, 7268
Bse3DI	GCAATG	8 cut(s)	1030, 1500, 5358, 5565, 5619, 6054, 6330, 7308
Bse8I	GATNNNNATC	5 cut(s)	1770, 2973, 5466, 6995, 8168
BseCI	ATCGAT	1 cut(s)	3796
BseJI	GATNNNNATC	5 cut(s)	1770, 2973, 5466, 6995, 8168
BseMI	GCAATG	8 cut(s)	1030, 1500, 5358, 5565, 5619, 6054, 6330, 7308
BseRI	GAGGAG	7 cut(s)	43, 51, 113, 2333, 5616, 6209, 6362
BseSI	GKGCMC	1 cut(s)	4045
BseYI	CCCAGC	2 cut(s)	3725, 7696
BsgI	GTGCAG	7 cut(s)	453, 2449, 3554, 4152, 4515, 5444, 6858
Bsh1236I	CGCG	3 cut(s)	105, 129, 3708
Bsh1285I	CGRYCG	1 cut(s)	265
BshNI	GGYRCC	6 cut(s)	3028, 5004, 6050, 7411, 7810, 8083
BshVI	ATCGAT	1 cut(s)	3796
BsiEI	CGRYCG	1 cut(s)	265
BsiHKAI	GWGCWC	7 cut(s)	33, 864, 1347, 3430, 4735, 5893, 6035
BsiSI	CCGG	6 cut(s)	216, 298, 536, 551, 6037, 6778
BslFI	GGGAC	2 cut(s)	1143, 1650
BsmBI	CGTCTC	1 cut(s)	5810
BsmFI	GGGAC	2 cut(s)	1143, 1650
BsmI	GAATGC	6 cut(s)	1324, 2459, 4109, 4261, 4767, 5305
Bso31I	GGTCTC	1 cut(s)	1517
Bsp119I	TTCGAA	2 cut(s)	2798, 2815
Bsp120I	GGGCCC	1 cut(s)	4041
Bsp1286I	GDGCHC	9 cut(s)	33, 864, 1347, 3430, 4045, 4735, 5893, 6035, 7639
Bsp1407I	TGTACA	3 cut(s)	1722, 2362, 4933
Bsp19I	CCATGG	2 cut(s)	1571, 7674
BspDI	ATCGAT	1 cut(s)	3796
BspFNI	CGCG	3 cut(s)	105, 129, 3708
BspHI	TCATGA	4 cut(s)	1873, 3826, 4588, 6628
BspMAI	CTGCAG	7 cut(s)	1714, 2280, 4915, 5641, 6303, 6859, 7666
BspMI	ACCTGC	3 cut(s)	3178, 4220, 5436
BspOI	GCTAGC	1 cut(s)	3065
BspT104I	TTCGAA	2 cut(s)	2798, 2815
BspT107I	GGYRCC	6 cut(s)	3028, 5004, 6050, 7411, 7810, 8083
BspTI	CTTAAG	3 cut(s)	832, 1007, 6512
BspTNI	GGTCTC	1 cut(s)	1517
BsrBI	CCGCTC	1 cut(s)	8081
BsrDI	GCAATG	8 cut(s)	1030, 1500, 5358, 5565, 5619, 6054, 6330, 7308
BsrGI	TGTACA	3 cut(s)	1722, 2362, 4933
BssNI	GRCGYC	1 cut(s)	966
BssSI	CACGAG	4 cut(s)	26, 1752, 3090, 7422
BssT1I	CCWWGG	9 cut(s)	888, 1571, 4036, 6461, 6892, 7257, 7522, 7674, 8183
Bst2BI	CACGAG	4 cut(s)	26, 1752, 3090, 7422
Bst6I	CTCTTC	5 cut(s)	2032, 3888, 4912, 5724, 7194
BstACI	GRCGYC	1 cut(s)	966
BstAFI	CTTAAG	3 cut(s)	832, 1007, 6512
BstAPI	GCANNNNNTGC	3 cut(s)	1497, 3170, 5422
BstAUI	TGTACA	3 cut(s)	1722, 2362, 4933
BstBAI	YACGTR	3 cut(s)	761, 5047, 5183
BstBI	TTCGAA	2 cut(s)	2798, 2815
BstDSI	CCRYGG	3 cut(s)	1571, 1739, 7674
BstEII	GGTNACC	1 cut(s)	4978
BstENI	CCTNNNNNAGG	3 cut(s)	3887, 4999, 7021
BstFNI	CGCG	3 cut(s)	105, 129, 3708
BstH2I	RGCGCY	3 cut(s)	341, 5618, 6800
BstHHI	GCGC	8 cut(s)	42, 107, 131, 340, 1018, 3980, 5617, 6799
BstMCI	CGRYCG	1 cut(s)	265
BstPI	GGTNACC	1 cut(s)	4978
BstSLI	GKGCMC	1 cut(s)	4045
BstSNI	TACGTA	1 cut(s)	5183
BstUI	CGCG	3 cut(s)	105, 129, 3708
BstV2I	GAAGAC	1 cut(s)	3372
BstX2I	RGATCY	5 cut(s)	529, 2593, 3292, 6234, 7115
BstXI	CCANNNNNNTGG	3 cut(s)	1630, 5884, 7626
BstYI	RGATCY	5 cut(s)	529, 2593, 3292, 6234, 7115
Bsu15I	ATCGAT	1 cut(s)	3796
Bsu36I	CCTNAGG	2 cut(s)	4974, 7268
BsuTUI	ATCGAT	1 cut(s)	3796
BtgI	CCRYGG	3 cut(s)	1571, 1739, 7674
BtrI	CACGTC	3 cut(s)	4272, 4653, 4664
BtsI	GCAGTG	5 cut(s)	198, 4348, 7228, 7296, 7659
BveI	ACCTGC	3 cut(s)	3178, 4220, 5436
CaiI	CAGNNNCTG	7 cut(s)	1194, 2284, 4012, 4216, 4712, 5588, 6160
CciI	TCATGA	4 cut(s)	1873, 3826, 4588, 6628
CfoI	GCGC	8 cut(s)	42, 107, 131, 340, 1018, 3980, 5617, 6799
ClaI	ATCGAT	1 cut(s)	3796
CseI	GACGC	2 cut(s)	446, 4574
CspCI	CAANNNNNGTGG	2 cut(s)	7975, 8010
DraI	TTTAAA	4 cut(s)	2109, 3015, 4096, 4302
DraIII	CACNNNGTG	1 cut(s)	1217
DrdI	GACNNNNNNGTC	1 cut(s)	1531
DseDI	GACNNNNNNGTC	1 cut(s)	1531
EaeI	YGGCCR	3 cut(s)	3003, 7681, 8100
Eam1104I	CTCTTC	5 cut(s)	2032, 3888, 4912, 5724, 7194
EarI	CTCTTC	5 cut(s)	2032, 3888, 4912, 5724, 7194
Ecl136II	GAGCTC	2 cut(s)	31, 4733
Eco105I	TACGTA	1 cut(s)	5183
Eco130I	CCWWGG	9 cut(s)	888, 1571, 4036, 6461, 6892, 7257, 7522, 7674, 8183
Eco147I	AGGCCT	2 cut(s)	1258, 4241
Eco24I	GRGCYC	4 cut(s)	33, 4045, 4735, 7639
Eco31I	GGTCTC	1 cut(s)	1517
Eco32I	GATATC	2 cut(s)	822, 6202
Eco47I	GGWCC	8 cut(s)	326, 1157, 1743, 2323, 3993, 5209, 5993, 7671
Eco47III	AGCGCT	3 cut(s)	339, 5616, 6798
Eco53kI	GAGCTC	2 cut(s)	31, 4733
Eco57I	CTGAAG	7 cut(s)	948, 3939, 4034, 4984, 5330, 7571, 8154
Eco72I	CACGTG	1 cut(s)	761
Eco81I	CCTNAGG	2 cut(s)	4974, 7268
Eco91I	GGTNACC	1 cut(s)	4978
EcoICRI	GAGCTC	2 cut(s)	31, 4733
EcoNI	CCTNNNNNAGG	3 cut(s)	3887, 4999, 7021
EcoO109I	RGGNCCY	3 cut(s)	4041, 4042, 4992
EcoO65I	GGTNACC	1 cut(s)	4978
EcoRI	GAATTC	1 cut(s)	1638
EcoRV	GATATC	2 cut(s)	822, 6202
EcoT14I	CCWWGG	9 cut(s)	888, 1571, 4036, 6461, 6892, 7257, 7522, 7674, 8183
EcoT22I	ATGCAT	9 cut(s)	703, 910, 1030, 1401, 1796, 2461, 2530, 3474, 7917
EcoT38I	GRGCYC	4 cut(s)	33, 4045, 4735, 7639
ErhI	CCWWGG	9 cut(s)	888, 1571, 4036, 6461, 6892, 7257, 7522, 7674, 8183
Esp3I	CGTCTC	1 cut(s)	5810
FalI	AAGNNNNNCTT	6 cut(s)	2561, 2593, 5481, 5513, 6944, 6976
FaqI	GGGAC	2 cut(s)	1143, 1650
FauI	CCCGC	4 cut(s)	1981, 5227, 6837, 7289
FauNDI	CATATG	1 cut(s)	3191
FbaI	TGATCA	6 cut(s)	517, 2695, 2974, 5764, 6940, 7513
FblI	GTMKAC	1 cut(s)	5494
FriOI	GRGCYC	4 cut(s)	33, 4045, 4735, 7639
FspI	TGCGCA	1 cut(s)	3979
GlaI	GCGC	8 cut(s)	41, 106, 130, 339, 1017, 3979, 5616, 6798
GsaI	CCCAGC	2 cut(s)	3729, 7700
GsuI	CTGGAG	3 cut(s)	372, 1087, 3479
HaeII	RGCGCY	3 cut(s)	341, 5618, 6800
HapII	CCGG	6 cut(s)	216, 298, 536, 551, 6037, 6778
HgaI	GACGC	2 cut(s)	446, 4574
HhaI	GCGC	8 cut(s)	42, 107, 131, 340, 1018, 3980, 5617, 6799
Hin1I	GRCGYC	1 cut(s)	966
Hin6I	GCGC	8 cut(s)	40, 105, 129, 338, 1016, 3978, 5615, 6797
HinP1I	GCGC	8 cut(s)	40, 105, 129, 338, 1016, 3978, 5615, 6797
HincII	GTYRAC	5 cut(s)	2650, 4527, 6555, 6690, 7824
HindII	GTYRAC	5 cut(s)	2650, 4527, 6555, 6690, 7824
HindIII	AAGCTT	5 cut(s)	1349, 1733, 3301, 5271, 6180
HpaI	GTTAAC	2 cut(s)	6555, 6690
HpaII	CCGG	6 cut(s)	216, 298, 536, 551, 6037, 6778
Hpy99I	CGWCG	7 cut(s)	83, 86, 140, 295, 463, 4657, 8124
Hsp92I	GRCGYC	1 cut(s)	966
HspAI	GCGC	8 cut(s)	40, 105, 129, 338, 1016, 3978, 5615, 6797
Ksp22I	TGATCA	6 cut(s)	517, 2695, 2974, 5764, 6940, 7513
KspAI	GTTAAC	2 cut(s)	6555, 6690
MbiI	CCGCTC	1 cut(s)	8081
MfeI	CAATTG	2 cut(s)	2663, 6704
MflI	RGATCY	5 cut(s)	529, 2593, 3292, 6234, 7115
MhlI	GDGCHC	9 cut(s)	33, 864, 1347, 3430, 4045, 4735, 5893, 6035, 7639
MlsI	TGGCCA	2 cut(s)	3005, 7683
MluNI	TGGCCA	2 cut(s)	3005, 7683
MlyI	GAGTC	9 cut(s)	497, 666, 1672, 2605, 4184, 4273, 5048, 7100, 7819
Mox20I	TGGCCA	2 cut(s)	3005, 7683
Mph1103I	ATGCAT	9 cut(s)	703, 910, 1030, 1401, 1796, 2461, 2530, 3474, 7917
MroXI	GAANNNNTTC	5 cut(s)	1638, 2889, 3294, 6741, 7719
MscI	TGGCCA	2 cut(s)	3005, 7683
MslI	CAYNNNNRTG	7 cut(s)	680, 2720, 5310, 5367, 6729, 7301, 7422
Msp20I	TGGCCA	2 cut(s)	3005, 7683
MspA1I	CMGCKG	9 cut(s)	950, 3161, 3538, 4009, 4196, 5139, 6160, 6854, 7622
MspCI	CTTAAG	3 cut(s)	832, 1007, 6512
MspI	CCGG	6 cut(s)	216, 298, 536, 551, 6037, 6778
MssI	GTTTAAAC	1 cut(s)	3015
MunI	CAATTG	2 cut(s)	2663, 6704
Mva1269I	GAATGC	6 cut(s)	1324, 2459, 4109, 4261, 4767, 5305
MvnI	CGCG	3 cut(s)	105, 129, 3708
NciI	CCSGG	2 cut(s)	216, 6037
NcoI	CCATGG	2 cut(s)	1571, 7674
NdeI	CATATG	1 cut(s)	3191
NheI	GCTAGC	1 cut(s)	3061
NmuCI	GTSAC	7 cut(s)	1217, 1533, 2177, 5339, 5823, 6518, 7103
NsbI	TGCGCA	1 cut(s)	3979
NsiI	ATGCAT	9 cut(s)	703, 910, 1030, 1401, 1796, 2461, 2530, 3474, 7917
NspV	TTCGAA	2 cut(s)	2798, 2815
OliI	CACNNNNGTG	1 cut(s)	7422
PacI	TTAATTAA	1 cut(s)	6951
PaeI	GCATGC	6 cut(s)	1495, 1651, 1815, 2576, 3476, 5416
PagI	TCATGA	4 cut(s)	1873, 3826, 4588, 6628
PaqCI	CACCTGC	1 cut(s)	5436
PasI	CCCWGGG	2 cut(s)	4045, 7036
PceI	AGGCCT	2 cut(s)	1258, 4241
PciI	ACATGT	4 cut(s)	3568, 4690, 5334, 6590
PcsI	WCGNNNNNNNCGW	1 cut(s)	458
PctI	GAATGC	6 cut(s)	1324, 2459, 4109, 4261, 4767, 5305
PdmI	GAANNNNTTC	5 cut(s)	1638, 2889, 3294, 6741, 7719
PflMI	CCANNNNNTGG	2 cut(s)	2140, 5785
PfoI	TCCNGGA	2 cut(s)	1857, 4511
PleI	GAGTC	9 cut(s)	496, 666, 1671, 2605, 4184, 4273, 5047, 7100, 7819
PmaCI	CACGTG	1 cut(s)	761
PmeI	GTTTAAAC	1 cut(s)	3015
PmlI	CACGTG	1 cut(s)	761
PpsI	GAGTC	9 cut(s)	496, 666, 1671, 2605, 4184, 4273, 5047, 7100, 7819
Ppu21I	YACGTR	3 cut(s)	761, 5047, 5183
PscI	ACATGT	4 cut(s)	3568, 4690, 5334, 6590
PshBI	ATTAAT	3 cut(s)	678, 6993, 8126
Psp124BI	GAGCTC	2 cut(s)	33, 4735
PspCI	CACGTG	1 cut(s)	761
PspEI	GGTNACC	1 cut(s)	4978
PspFI	CCCAGC	2 cut(s)	3725, 7696
PspOMI	GGGCCC	1 cut(s)	4041
PstI	CTGCAG	7 cut(s)	1714, 2280, 4915, 5641, 6303, 6859, 7666
PstNI	CAGNNNCTG	7 cut(s)	1194, 2284, 4012, 4216, 4712, 5588, 6160
PsuI	RGATCY	5 cut(s)	529, 2593, 3292, 6234, 7115
PvuII	CAGCTG	7 cut(s)	950, 3161, 3538, 4196, 5139, 6854, 7622
RseI	CAYNNNNRTG	7 cut(s)	680, 2720, 5310, 5367, 6729, 7301, 7422
SacI	GAGCTC	2 cut(s)	33, 4735
ScaI	AGTACT	4 cut(s)	1837, 1982, 6696, 7905
SchI	GAGTC	9 cut(s)	497, 666, 1672, 2605, 4184, 4273, 5048, 7100, 7819
SduI	GDGCHC	9 cut(s)	33, 864, 1347, 3430, 4045, 4735, 5893, 6035, 7639
SfuI	TTCGAA	2 cut(s)	2798, 2815
SinI	GGWCC	8 cut(s)	326, 1157, 1743, 2323, 3993, 5209, 5993, 7671
SmiMI	CAYNNNNRTG	7 cut(s)	680, 2720, 5310, 5367, 6729, 7301, 7422
SnaBI	TACGTA	1 cut(s)	5183
SpeI	ACTAGT	2 cut(s)	5863, 6128
SphI	GCATGC	6 cut(s)	1495, 1651, 1815, 2576, 3476, 5416
SseBI	AGGCCT	2 cut(s)	1258, 4241
SspI	AATATT	8 cut(s)	312, 448, 808, 1333, 2017, 2347, 2358, 2423
SstI	GAGCTC	2 cut(s)	33, 4735
StuI	AGGCCT	2 cut(s)	1258, 4241
StyI	CCWWGG	9 cut(s)	888, 1571, 4036, 6461, 6892, 7257, 7522, 7674, 8183
TaqII	GACCGA	1 cut(s)	251
TauI	GCSGC	6 cut(s)	50, 1475, 4012, 6160, 6815, 8084
TseFI	GTSAC	7 cut(s)	1217, 1533, 2177, 5339, 5823, 6518, 7103
Tsp45I	GTSAC	7 cut(s)	1217, 1533, 2177, 5339, 5823, 6518, 7103
TspGWI	ACGGA	7 cut(s)	124, 467, 1051, 1728, 2878, 3708, 7519
Van91I	CCANNNNNTGG	2 cut(s)	2140, 5785
Vha464I	CTTAAG	3 cut(s)	832, 1007, 6512
VpaK11BI	GGWCC	8 cut(s)	326, 1157, 1743, 2323, 3993, 5209, 5993, 7671
VspI	ATTAAT	3 cut(s)	678, 6993, 8126
XagI	CCTNNNNNAGG	3 cut(s)	3887, 4999, 7021
XbaI	TCTAGA	3 cut(s)	2393, 3637, 5971
XcmI	CCANNNNNNNNNTGG	6 cut(s)	1062, 1776, 3128, 6681, 6899, 8153
XmiI	GTMKAC	1 cut(s)	5494
XmnI	GAANNNNTTC	5 cut(s)	1638, 2889, 3294, 6741, 7719
ZraI	GACGTC	1 cut(s)	967
ZrmI	AGTACT	4 cut(s)	1837, 1982, 6696, 7905
Zsp2I	ATGCAT	9 cut(s)	703, 910, 1030, 1401, 1796, 2461, 2530, 3474, 7917

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.