Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0004721

Physical Location & Seq

Genomic Coordinates Reverse (-)

13809658 .. 13825071

Gene Structure 15414 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g15770.t5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 8163 bp

ATGGCCAACCTGACCCTCATCCACGAGCTCCGGGAACGCATCGCCGCCGCGTCCTCCACTCCTCCCAACAACTCACACGACGTCGCTTTGGAAACCCGATTCCGCGCCGTCCTTCCCAACCTTCTTCAAGCTCACGTTGTCCCCTCTCCTTCCGCGAATGAGAGAGAAGTGATAGCTATCTTGAGGCTGATCGGTTACACGGCGAAGCATTTTCCCGGCGTCTTTTACCATGGCAAGGCCAGCGCGATTCTCCCTATGCTCGGTCGCATTCTGGCTTTCTTTGCAGAGCCGGAGTTCCGTTCTAGGCATGGAGTGATATTTGACACGCTTGGACCGCTTTTGACCTTACTTCGTGGTGGAGCACAGGATGCTTATCGCCAATTTTTCATAGATTGCATGCTCGTTGTTCAAGATCTTTTATGTGTCGCATCAGTCAATGCAGACAAATCAAGTTTTACAGATTCAACTAGAGTGACTTTAAAGTGTTTCTGCGAGTCCTGGAATGCAATTTCGGATGATCCTTCACATATTGGAGATCTTCCAGAAAGTATTAAACCTGTTGATGGGACTGGGATCTTGATTAACCTTACAGGCAAAACAAGGTGGCAACCTTTTGCAACTTGGATGATTAAGCTAATTGGAAAATGCTTAACTGAAGGAACTCTTTATGTGGATGGACTCATCAATATGCCATTTGTTATGGCTGCATGGTCCCTTTTTTGTTACGGGGATGCTGGTTTGCACATGGCATTTTTTGAATTTGCGTGCATCATCGCTGGATCTGCTATAAAATGTGACGTCATTCCTTATCATAACATAATCCAATCGATTTCATCTATATTAAGCGAGGACAAAGAGGGAACTCCTGCATTTAGAAACACGGCTTATGATTCGTCCATTGGTGGTTGCCTAGAGGTATTGCACTCTAATTGCCCTGAGGGTATAGTCAAGCTAACGGCTGCAAATTTAGTCAATGTATTTCCTCATTCAATGAGAAGTACCCGAAGCCAGGAGCTTAAGGTTGCATTGTGCAACACATACGTACGGATTGCGAAGATGTGTCCCCCTCATATCTGGAGGCCAGAATCTCTCGTGTATGTACTTTCATGTCCGGAACCCTGCTTCTCATTAATAGATTGCTTACATGTAGCTCTCTCTATACTTGGTCCTGAGCTTGTTGGAGGGAGAATTACAGATAGTACCTGCCAGAGTTTTTCCTCAGTAAGTGATAAATCAATTGAAAACTCACATGTTGGAGGAAAAAGACCTATTGAGGATGTGGATTCTTTCAAGACTAAACGCCAAAAGATTGATGAAACAATCATCAATCCTGATTCTAATATTCAGTTGGAATGGCAGCGTACTCATATAGTTCCTTGTGAGGCAGAAGATTATGCAAATCGGATGCATAAGTCACTCCTTTCTTTTGCTGAATGTCTAAAATCTCCTGGTGTCAGTCCTAATTCCTTAAGACCTGATCTCGCTTTAACGGCTCTTAGCATTCTTTGCATTGCCTTCTGTAGATATCCAGAGACCAATCTGTCACTATGCATCTTTCATCAGATGTATGCATGGATACCTTGGATATGCCAACAGGCAAAGCAAGGAAGTACTGTTGAACTTGATATTTCCATCTACCTGGAAGGAATTCACTGCATGTTGCGTTTGCAAAATTGCTTAATCATGAAGTGTATGGATAGAAGGCTTGTCGATGCTGATCTTATACATGTCCTTCTGAAGCTTCCTTGGACCCATTCTCATGTAATTACTGACCACCATCAATTGTGGAAAACAAAATGCATCTCCCTTCAAGTTGCATGCAAACTTGGTCATAGCGCAAGAATTGAAACTCAACTTGAAGTATTGGATTTGAGTCTTAATGATGAATGTGACGAAGTCAGAATTGAAGCTATAATTTCTATGTCCGTGATTGTCATGTGGTCTAGCCTCAGTGGTCTTCCTCACATATTCAGAAGGCTCGAGCTCTTGGGGCGAGAGAGAAGTGAGAAGGTTAAGAATATCATTCCCTTTTGTCTTGGTTTTTTGTCATGTCTTTACGGATCTCATAACAATGGAGATGACATAAATAGAAGCCAGTGTAAACTATTTTCAAGAATGAAAAGTGAGAGGCACGATCAAACAGTGGATTATGTAGTGCAAGGATTCTGGTGTTCAAAGTGTGATAGAAGTGTTCAACACAATACTGAGTCATACTCAAATATCATAAATCTTCCTGAAAATCCCAGAGAATTGGACTGTAATTTTCTCCACCTTCAGTCTCTATATTTTGAGCTTCTCAATGATGAGTCATCTGAAGAGATTCAAGTGGCTTGTGTGAAAAGTATCCGCCGAGTACTTGTACATGGGGGCATAGAGAATCTATTGGATTCTAGAGTTGAGTGGATCAAGTGTGTTAAATATCTACTGATTAATACCAGGAAGGCTATAAGAGAAGCATTCTGCCCTCAGATTAGTTCTTTCGTTGAGGGTTCAATTTTGAGTTGCTTATTTCCTGACGAGGGCATGTCAAGTAACGGCAAAGAACAAGGGTTTTTGAACTTAATCAACAACTCCTTTTCAGAAACTGAAGATGTCCAAATCATTGAGACCCTTTTGGAATCAACAGCTGAAATAATGATGGCAGTTGATATTCACAGTCAATTATTCTTGTTTTCTCTTCTTTTGTTGGTTGATCAACTTGATAATCCACACACGACAGTGAGAATGGTTGCAGCAAAGTTGATCCACAAATCCAGCTGTTTTCATCTTAAAGGAGGCTTCCAAGTACTCCTTCTGAAAGTTGTTCATGTTCGAAATGAACTCTTTGACTATCTGTCTTCGAGGCTATCTAGCCGTCCGACTGTGGTCCAAGAGTTTGCAGAATCAGTTCTTGGTATTGAAACAGAAGAACTTGTCAAGAAAATGGTTCCAGTAGTTCTTCCAAAGCTTGTGGTGTCTCAGCAGAATGATGATCAAGCAGTTGACACCTTATATGAACTGGCCAAGTGGTTACAAACTGATGTTGCAGGTCTTATAGTTCTTTGGGTGCCGAAAGTGCTAGCTTTTGCTCTCCATCAACCAGATATGCGAGAGCTAGATGCTGCTGTACAGTTCTACCATACACAAATCGGTTCTAACAAAAGAGAAATCTTTGCTGCTGCATTAAATAATCTTCTAGATGAACTCATATGCTTTCTGGATGGAGGTGATTCAGATGATATAAGCGGAAGGTTAGCAAGGGTACCTGAGACGGTAAAAGAGGTTGCTAGAGTTCTGGATGAAGGTGAAGATCTACCAAACTTTTTGAAGAATCATTTTGCCCACCTTCTAAACAGTATTGATAGAAAGATGCTCCATGCAGAAGAATTTTCTCTGCAGAAACAAGCCTTGCAACGAATTGAGATGCTAATTAAAATGATGGGTCGTCATCTTAGTACTTATGTGCCTAAATTAATGGTTCTTCTCATGCATGCTATTGATAAAGAACTCCTCCAGAGTGAGGGTCTCTCAGTGTTGCATTTTTTCATTAGGCAGCTGGTGGAAGTATCACCGGCTAGCACTAAACATGTCATTTCACAAGTTTTTGCTGCTCTTATTCCCTTTCTTGAGAGAGATGAAGGAAGTCCAGTACATCTGGATAAAGTGGTAAAAATTTTGGAAGAACTAGTTCTAAATAACAGGGATATTTTAAAGCAGCATATTCGTGAATTCCCTCCATTGCCCAGTATTCCAGCTCTAACGAAAGTGAACAAGGCTATACAAGAAGCCAGAGGGTCAATGACTTTGAGGGATCGATTGCGTGATGTTGTTGATGGTCTGAATAATGACAGCTTAAATGTGAGGTACATGGTAGTGTGTGAGTTGAAAAAGTTGCTGAACCTGGAACGGGAAGGGGTTACATCTCTAATAACTGCTGAAGCTGGTGCGGATATGGAAATTTTGAGCTCTTTAATCAGATCTCTACTTAATGGATGTGCAGAAGAATCAAGGAGAGCAGTTGGACAGCGGCTGAAGTTGGTGTGTGCTGACTGCCTTGGGGCCCTGGGTGCAGTTGACCCTGCTAAAGTGAAGGCCTTTTCGTGCCAACGCTTTAAAATTGAATGCTCTGATGATGACCTTATCTATGAGTTGATTCAGAAGCAACTTGCACGGGCTTTTAGAGCTGCACCTGACACTATAATTCAAGATTCAGCGGTAGTGGCCATACAGGAACTGCTAAAGATTGCAGGTTGTGAGGCCTCATTACATGAGAATGCTGCCTCTTCTATGTCGGCTCCAAAGGACAAAGAGCCTCTGCTGGGTTCTGCATCTGGAATGATGATTACTGATAGTAGAAATGAGATGACTAGAAGGGGTCAGAGATTATGGGACCGGTTCTCCAATTACGTGAAAGAAATAATTGCCCCTTACTTGTCCTCTAGATTTCAACTTCCTAATGTTGCTGATCCTGCATTTGTTGGCCCAATTTACCGTCCATCTATGTCATTCAGAAGATGGATATTCTTCTGGATAAGAAAGCTGACTGCACATGCCACTGGTTCTCGTGCAAGAATTTTCAATGCTTGTCGAGGCATAGTGCGCCAGGATATGCAAACAGCAATTTATCTGCTTCCGTATTTAGTTCTTAATGCTGTTTGTCATGGCACGGAGGAGGCACGCTATGGCATAACAGAAGAAATCCTATATGTTCTTGATGTTGCTGCATCTAATCACAGTGAGGATGCAGTCCATGGAGTCAATGGGAAAAATGAAGTATGCATTCAAGCTGTGTTCATTCTCCTTGATAATCTTGGTCAATGGGTGGATGACGTTAGACAAGAACTATTCCTTTCTTCTCAACTGTTAGCTTCTAAGCAACAATCCAAGACCAGGCATCAAACTCAGTATACTACCAATCAGGACCAACTTCGTTTACAGTGTGAACATGTTTCAAAACTCTTGTCTGCTGTTCCAAAGGAGACCCTTGCCAGGGCCTCCTTCAGGTGTCAGGCTTATGCAAGATCTTTCATGTATTTTGAGTTGTACGTGAGGGGTAAGTCAGGTTCTTTCAACCCTGCATCTGAGCAAAGTGGTTCATTTGATGATGCAGATGTTTCATATCTGATGGAAATATACAGTTGCCTGGATGAGCCTGATGGTCTTTCTGGATTTGCATTTTTACGTAAATCTTTGGAATTACAAGACCAGCTCTTGATAAACAAAAAAGCCGGGAACTGGGCAGAGGTTTTAACTTCTTGTGAACAAGCTTTGCAGATGGAACCGACATCAGTTCAAAAGCAGTCTGATGTGCTTAACTGTTTATTAAACATGTGTCACCTTCAGGCTATGGTTACTCATGTGGATGGTTTAATGTGTAGGATTCCCCAATATAAGAAAACATGGTGCATGCAAGGTGTTCAGGCAGCATGGAGACTTGGTAGGTGGGATTTGATGGATGAGTACCTTAGTGGAGCTGATGGAGAAGGTTTACTTTGTAGCAGTTCTGAAAGTAACGCCTCATTTGATATGGATGTTGCTAAAATTCTGCAGGCAATGATGACTAAGGATCAGTTCTCAGTTGAAAAAAAAATTGCCCTCTCCAAGCAATCTCTAATTGCTCCCCTTTCTGCTGCAGGCATGGATTCTTATGTGCGGGCTTACCCTTTTGTTGTGAAACTTCACCTGCTCCGAGAGCTTGAGGATTTTTATTCTCTTCTTGGTGATGCTTCTTTCTTGGAGAAATCGTTTGCATTGGATGATCCTAAATTCTCGAAAGTGAGGGAGAACTGGGAAGACCGTCTCAGATTTACTCAGCCATCACTCTGGGCAAGGGAGCCACTTTTGGCTTTCCGAAGATTGGTTTTTGCTAACAGTGGTCTTGATGCTCAAGTTGGGAACTGCTGGCTTCAATATGCAAAGCTCTGTCGCATGGCTGGTCATTATGAGACAGCAAATCAGGCCATTCTGGAAGCCCAAGCTACCAATGCACATAATGTTCACATGGAGAAGGCTAAACTTCTATGGAGCACTAGGCGATCTGATGGTGCAATTGCACAGTTGCAACAGTGTCTCTTGAACATGCCTGAAGGGGTTGTAGGCACCACTGCAATTTCCTCAATTACTAGTCTTTCACTGGTTCCCCCAAACCTGCCCCCTTTACTTAATAATACTCAAGCTTGGAATGAAAATCGAGATATTGCAAAGACACTTCTCCTCTATTCTAGGTGGATCCATTACACCGGACAGAAGCAGAAAGAAGATGTCATAAGTCTATATAAGAGGGTGAGGGAACTGCAGCCTGAGTGGGAGAAAGGATATTTTTACATGGCTAAATATTATGAGGAAGTGCTAGCTGATGCCAGGAAGCGTCAGGAAGAAAATATTGAACTGGGTCCTAAGAAACGGCCATCAAATAGTGCTAATGTTGGCTCTTCAAAATTAAAAGCTGAGAAGGCTTGGTGGGCATATGTGCCTGATATACTGTTATTCTATGCAAGAGGCCTTCTTAGGGGCCACAAGAATCTCTTTCAAGCACTTCCAAGGTTGTTGACCCTATGGTTTGACTTTGGGACTATGTATGAAAGGAGTGGCACATCTTCCAATAGGGATTTACAAAATGTCCACAAGTTGGTGATGAGATGCATGCTAGGATGTTTGAAAGACTTGCCAACATATCAGTGGCTAACAGTATTGCCTCAGTTGGTTTCAAGAATCTGCCACCAGAATAAGGAAGTAGTTCAAGTGGTTAAAAGCATCATCACATCAGTTCTTCGGCAATACCCACAACAGGCCTTGTGGATTATGGCAGCGGTTTCAAAATCCACTGTTCCATCCAGGAGGGAGGCAGCTGCTGAAATTCTACAGGAGGCACGGAAAGATTTCATCCAAGGAGCTAATGAAAGCAATTTGTTTGATCAGTTTGCCAGTATGATTGATCAGTTTATCAAGTTGTGCTTCCATGCTTGTCATACAAAGGCGAAAACAATCAATATCTCCACTGAATTTAGTCTCTTGAAGAGGATGATGCCGCTGGGAATTATCATGCCGATTCAGCAATCTCTAACTGTTAGCCTACCGACATGCGATGGGAAGCTCACTGACTCGCTTAAGTCTGATATCTTTTCTGCAACTGATCTTCCTACCATAATAGGAATACGTGATGAGGCTGAGATTCTTTCTTCCCTTCAGCGACCTAAGAAAATTGTTTTATTGGGCAGTGACGGCATTGAACGTCCGTTCCTCTGCAAACCCAAGGATGACCTCAGGAAAGATGCACGGATGATGGAGTTCACAGCAATGATAAACCGGTTGCTGTCTAAATACCCAGCAAGCCGTCGGAGGAAGCTCTACATTCGTACCTTTGCAGTAATTCCTTTGACAGAGGACTGTGGCATGATAGAATGGGTGCCACACACCCGTGGACTTCGGCAGATACTTCAAGACATATATATGAACTGTGGAAACTTTGATAGGGATACAAATTCAAAGATCAAGCGCATATATGATCAATGCAAGGGTAAAATACCAGAAGATGAGATGTTGAAGGACAAAATTCTTCCGATGTTCCCTCCAGTTTTCCACAAGTGGTTCCTGACCACTTTTTCTGAGCCAGCTGCTTGGTTTAGGGCTCGGATTGCTTATGCACACACTACTGCAGTGTGGTCCATGGTTGGACATATTGTGGGGCTTGGTGACCGACATGGGGAAAACATTCTGTTTGATTCTACAACTGGTGATTGTGTTCATGTTGATTTCAGTTGCTTATTTGACAAAGGCTTGCAGTTGGAGAAGCCTGAGCTGGTACCTTTCAGATTGACTCAGAATATGATTGATGGCTTGGGCATCACTGGTTATGAGGGAATCTTTTTGAGAATCTGCGAAATCACACTTTCAGTACTGAGGATGCATCGGGAGACATTGATGAGTGTTCTTGAGACTTTTGTCCATGATCCTCTAGTAGAATGGACAAAATCACACAAGTCTAGTGGAGTAGAAGTTCAGAATCCACACGCGCAGCTAGCCATCAGTAACATTGAGGCAAGGTTGCAAGGAGTAGTTGTTGGTGTTGGAGCAGCACCATCTTTGCCTTTGGCTGTAGAAGGTCAGGCTCGTCGATTAATAGCTGAAGCAGTCTCCCACAAAAATCTCGGAAAGATGTATATCTGGTGGATGCCATGGTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000723 GO:0000726 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005911 GO:0006139 GO:0006259 GO:0006278 GO:0006281 GO:0006282 GO:0006302 GO:0006303 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007004 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009506 GO:0009628 GO:0009987 GO:0010035 GO:0010038 GO:0010044 GO:0010212 GO:0010332 GO:0010833 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0022414 GO:0030054 GO:0031323 GO:0031347 GO:0032200 GO:0032204 GO:0032501 GO:0032504 GO:0033043 GO:0033044 GO:0033554 GO:0034641 GO:0034645 GO:0034654 GO:0042221 GO:0042592 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043247 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0046483 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051128 GO:0051171 GO:0051276 GO:0051321 GO:0051716 GO:0055044 GO:0060249 GO:0060255 GO:0065007 GO:0065008 GO:0071704 GO:0071840 GO:0071897 GO:0080090 GO:0080134 GO:0080135 GO:0090304 GO:1901360 GO:1901362 GO:1901576 GO:2001020

KEGG Pathways

Metabolic & Signaling

ko03460 ko04110 ko04115 ko04214 ko04218 ko05165 ko05166 map03460 map04110 map04115 map04214 map04218 map05165 map05166

Pfam Domains

Protein Families

FAT FATC PI3_PI4_kinase UME

Protein Analysis

2721

Amino Acids

307.08

Weight (kDa)

6.56

Isoelectric Point (pI)

50.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UME	PF08064	971 - 1071	7.3e-17	UME (NUC010) domain
M-HEAT_ATR	PF25030	1358 - 1601	1.5e-33	Serine/threonine-protein kinase ATR, M-HEAT region
FAT	PF02259	1668 - 2047	5.1e-57	FAT domain
HEAT_ATR	PF23593	2075 - 2173	2.9e-32	Serine/threonine-protein kinase ATR-like, HEAT repeats
PI3_PI4_kinase	PF00454	2275 - 2519	3.5e-56	Phosphatidylinositol 3- and 4-kinase
FATC	PF02260	2559 - 2590	9.7e-13	FATC domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0004721)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G40820 AT5G40820 AT5G40820 AT5G40820
fragaria_vesca	FvH4_2g15770 FvH4_2g15770 FvH4_2g15770 FvH4_2g15770 FvH4_2g15770
malus_domestica	MD05G1126600.v1.1
prunus_persica	Prupe.8G170300_v2.0.a1 Prupe.8G170300_v2.0.a1 Prupe.8G170300_v2.0.a1 Prupe.8G170300_v2.0.a1 Prupe.8G170300_v2.0.a1 Prupe.8G170300_v2.0.a1 Prupe.8G170300_v2.0.a1 Prupe.8G170300_v2.0.a1
pyrus_communis	pycom05g12250 pycom10g11100 pycom10g11110
rosa_chinensis	RchiOBHm_Chr6g0279121
rosa_laevigata	RLG00000013166
rosa_multiflora	Rmu_sc0014203.1_g000022
rosa_roxburghii	Rroxscaffold_7G00189110
rosa_rugosa	Rorug06G0122400
rosa_samantha	Rh6AG231100 Rh6BG236000 Rh6CG238100 Rh6DG229700
rosa_wichuraiana	Rw6G020240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	5670
AasI	GACNNNNNNGTC	1 cut(s)	1540
AatII	GACGTC	2 cut(s)	84, 801
Acc36I	ACCTGC	5 cut(s)	1211, 3017, 4217, 5670, 6135
Acc65I	GGTACC	2 cut(s)	3241, 7780
AccB1I	GGYRCC	5 cut(s)	3046, 3241, 6077, 7384, 7780
AccB7I	CCANNNNNTGG	1 cut(s)	6607
AccI	GTMKAC	1 cut(s)	4886
AccII	CGCG	5 cut(s)	50, 105, 155, 245, 7991
AccIII	TCCGGA	1 cut(s)	1111
AcoI	YGGCCR	4 cut(s)	3, 3000, 4200, 6383
AcyI	GRCGYC	3 cut(s)	81, 219, 798
AflII	CTTAAG	3 cut(s)	1016, 1468, 7085
AflIII	ACRYGT	6 cut(s)	1144, 1249, 1726, 3565, 4924, 5307
AgeI	ACCGGT	2 cut(s)	4371, 7284
AhdI	GACNNNNNGTC	1 cut(s)	2833
AhlI	ACTAGT	2 cut(s)	3664, 6101
AjuI	GAANNNNNNNTTGG	4 cut(s)	2775, 2807, 2874, 2906
AleI	CACNNNNGTG	2 cut(s)	2717, 7395
AloI	GAACNNNNNNTCC	4 cut(s)	7200, 7232, 7959, 7991
Alw21I	GWGCWC	5 cut(s)	30, 364, 1986, 3947, 6008
AlwNI	CAGNNNCTG	4 cut(s)	2585, 4009, 4213, 6830
Ama87I	CYCGRG	1 cut(s)	1979
Aor13HI	TCCGGA	1 cut(s)	1111
ApaI	GGGCCC	1 cut(s)	4042
ArsI	GACNNNNNNTTYG	2 cut(s)	4925, 4957
AseI	ATTAAT	4 cut(s)	1130, 2430, 3452, 8096
AsiGI	ACCGGT	2 cut(s)	4371, 7284
Asp700I	GAANNNNTTC	7 cut(s)	1647, 2319, 2886, 3666, 6714, 6857, 7689
Asp718I	GGTACC	2 cut(s)	3241, 7780
AspLEI	GCGC	6 cut(s)	107, 245, 1838, 4581, 7476, 7993
AsuC2I	CCSGG	3 cut(s)	32, 216, 5209
AsuII	TTCGAA	1 cut(s)	2812
AsuNHI	GCTAGC	4 cut(s)	3058, 3554, 6328, 7996
AvaI	CYCGRG	1 cut(s)	1979
AvaII	GGWCC	9 cut(s)	332, 711, 1166, 1749, 2866, 4369, 4900, 6371, 7641
AxyI	CCTNAGG	2 cut(s)	936, 7241
BaeGI	GKGCMC	1 cut(s)	4042
BaeI	ACNNNNGTAYC	2 cut(s)	7318, 7351
BalI	TGGCCA	3 cut(s)	5, 3002, 4202
BamHI	GGATCC	1 cut(s)	6207
BanI	GGYRCC	5 cut(s)	3046, 3241, 6077, 7384, 7780
BanII	GRGCYC	5 cut(s)	30, 1986, 3947, 4042, 7609
BauI	CACGAG	3 cut(s)	23, 1091, 4542
BbsI	GAAGAC	3 cut(s)	1949, 2829, 5778
Bbv12I	GWGCWC	5 cut(s)	30, 364, 1986, 3947, 6008
BcgI	CGANNNNNNTGC	2 cut(s)	3683, 3717
BciVI	GTATCC	3 cut(s)	1569, 2354, 7447
BclI	TGATCA	5 cut(s)	2692, 2971, 6892, 6913, 7483
BcnI	CCSGG	3 cut(s)	32, 216, 5209
BcuI	ACTAGT	2 cut(s)	3664, 6101
BfmI	CTRYAG	8 cut(s)	1519, 3374, 5525, 5610, 6272, 6839, 7632, 8073
BfrI	CTTAAG	3 cut(s)	1016, 1468, 7085
BfuAI	ACCTGC	5 cut(s)	1211, 3017, 4217, 5670, 6135
BfuI	GTATCC	3 cut(s)	1569, 2354, 7447
BglII	AGATCT	5 cut(s)	412, 535, 3289, 3956, 5000
BmcAI	AGTACT	5 cut(s)	1612, 2355, 2787, 3436, 7875
Bme18I	GGWCC	9 cut(s)	332, 711, 1166, 1749, 2866, 4369, 4900, 6371, 7641
BmeRI	GACNNNNNGTC	1 cut(s)	2833
BmeT110I	CYCGRG	1 cut(s)	1979
BmrI	ACTGGG	5 cut(s)	579, 3717, 5224, 5776, 6377
BmtI	GCTAGC	4 cut(s)	3062, 3558, 6332, 8000
BmuI	ACTGGG	5 cut(s)	579, 3717, 5224, 5776, 6377
BoxI	GACNNNNGTC	2 cut(s)	2864, 7919
BpiI	GAAGAC	3 cut(s)	1949, 2829, 5778
BplI	GAGNNNNNCTC	4 cut(s)	2198, 2230, 3491, 3523
BpmI	CTGGAG	3 cut(s)	1096, 3476, 7533
Bpu10I	CCTNAGC	2 cut(s)	1170, 7773
Bpu14I	TTCGAA	1 cut(s)	2812
BpuEI	CTTGAG	6 cut(s)	202, 3626, 5696, 5850, 6135, 7931
BpuMI	CCSGG	3 cut(s)	32, 216, 5209
Bsa29I	ATCGAT	2 cut(s)	827, 3793
BsaAI	YACGTR	5 cut(s)	1042, 4387, 5026, 5162, 7136
BsaBI	GATNNNNATC	4 cut(s)	176, 372, 1716, 8138
BsaHI	GRCGYC	3 cut(s)	81, 219, 798
BsaI	GGTCTC	4 cut(s)	1526, 2600, 3509, 4952
BsaWI	WCCGGW	4 cut(s)	1111, 4371, 6218, 7284
Bse118I	RCCGGY	3 cut(s)	3550, 4371, 7284
Bse21I	CCTNAGG	2 cut(s)	936, 7241
Bse3DI	GCAATG	4 cut(s)	1509, 3716, 5538, 7281
Bse8I	GATNNNNATC	4 cut(s)	176, 372, 1716, 8138
BseAI	TCCGGA	1 cut(s)	1111
BseCI	ATCGAT	2 cut(s)	827, 3793
BseJI	GATNNNNATC	4 cut(s)	176, 372, 1716, 8138
BseMI	GCAATG	4 cut(s)	1509, 3716, 5538, 7281
BseRI	GAGGAG	4 cut(s)	51, 3479, 4664, 6182
BseSI	GKGCMC	1 cut(s)	4042
BseYI	CCCAGC	3 cut(s)	4297, 7009, 7303
BsgI	GTGCAG	4 cut(s)	3996, 4068, 4149, 4509
Bsh1236I	CGCG	5 cut(s)	50, 105, 155, 245, 7991
Bsh1285I	CGRYCG	1 cut(s)	265
BshNI	GGYRCC	5 cut(s)	3046, 3241, 6077, 7384, 7780
BshTI	ACCGGT	2 cut(s)	4371, 7284
BshVI	ATCGAT	2 cut(s)	827, 3793
BsiEI	CGRYCG	1 cut(s)	265
BsiHKAI	GWGCWC	5 cut(s)	30, 364, 1986, 3947, 6008
BsiHKCI	CYCGRG	1 cut(s)	1979
BsiSI	CCGG	9 cut(s)	31, 216, 290, 1112, 3551, 4372, 5208, 6219, 7285
BsiWI	CGTACG	1 cut(s)	1042
BslFI	GGGAC	6 cut(s)	125, 580, 697, 1047, 4382, 6562
BsmBI	CGTCTC	2 cut(s)	3242, 5783
BsmFI	GGGAC	6 cut(s)	125, 580, 697, 1047, 4382, 6562
BsmI	GAATGC	7 cut(s)	267, 508, 1500, 2456, 4106, 4258, 4758
Bso31I	GGTCTC	4 cut(s)	1526, 2600, 3509, 4952
BsoBI	CYCGRG	1 cut(s)	1979
Bsp119I	TTCGAA	1 cut(s)	2812
Bsp120I	GGGCCC	1 cut(s)	4038
Bsp1286I	GDGCHC	7 cut(s)	30, 364, 1986, 3947, 4042, 6008, 7609
Bsp13I	TCCGGA	1 cut(s)	1111
Bsp1407I	TGTACA	2 cut(s)	2359, 3106
Bsp19I	CCATGG	4 cut(s)	229, 4729, 7644, 8153
BspDI	ATCGAT	2 cut(s)	827, 3793
BspEI	TCCGGA	1 cut(s)	1111
BspFNI	CGCG	5 cut(s)	50, 105, 155, 245, 7991
BspHI	TCATGA	1 cut(s)	1683
BspMAI	CTGCAG	5 cut(s)	3378, 5529, 5614, 6276, 7636
BspMI	ACCTGC	5 cut(s)	1211, 3017, 4217, 5670, 6135
BspOI	GCTAGC	4 cut(s)	3062, 3558, 6332, 8000
BspQI	GCTCTTC	1 cut(s)	6415
BspT104I	TTCGAA	1 cut(s)	2812
BspT107I	GGYRCC	5 cut(s)	3046, 3241, 6077, 7384, 7780
BspTI	CTTAAG	3 cut(s)	1016, 1468, 7085
BspTNI	GGTCTC	4 cut(s)	1526, 2600, 3509, 4952
BsrDI	GCAATG	4 cut(s)	1509, 3716, 5538, 7281
BsrFI	RCCGGY	3 cut(s)	3550, 4371, 7284
BsrGI	TGTACA	2 cut(s)	2359, 3106
BssAI	RCCGGY	3 cut(s)	3550, 4371, 7284
BssNAI	GTATAC	1 cut(s)	4887
BssNI	GRCGYC	3 cut(s)	81, 219, 798
BssSI	CACGAG	3 cut(s)	23, 1091, 4542
Bst1107I	GTATAC	1 cut(s)	4887
Bst2BI	CACGAG	3 cut(s)	23, 1091, 4542
Bst6I	CTCTTC	6 cut(s)	2310, 2682, 4267, 5697, 6415, 6989
BstACI	GRCGYC	3 cut(s)	81, 219, 798
BstAFI	CTTAAG	3 cut(s)	1016, 1468, 7085
BstAPI	GCANNNNNTGC	2 cut(s)	368, 1506
BstAUI	TGTACA	2 cut(s)	2359, 3106
BstBAI	YACGTR	5 cut(s)	1042, 4387, 5026, 5162, 7136
BstBI	TTCGAA	1 cut(s)	2812
BstDSI	CCRYGG	5 cut(s)	229, 4729, 7396, 7644, 8153
BstEII	GGTNACC	1 cut(s)	7670
BstENI	CCTNNNNNAGG	1 cut(s)	4978
BstFNI	CGCG	5 cut(s)	50, 105, 155, 245, 7991
BstHHI	GCGC	6 cut(s)	107, 245, 1838, 4581, 7476, 7993
BstMCI	CGRYCG	1 cut(s)	265
BstPAI	GACNNNNGTC	2 cut(s)	2864, 7919
BstPI	GGTNACC	1 cut(s)	7670
BstSFI	CTRYAG	8 cut(s)	1519, 3374, 5525, 5610, 6272, 6839, 7632, 8073
BstSLI	GKGCMC	1 cut(s)	4042
BstSNI	TACGTA	2 cut(s)	1042, 5162
BstUI	CGCG	5 cut(s)	50, 105, 155, 245, 7991
BstV2I	GAAGAC	3 cut(s)	1949, 2829, 5778
BstX2I	RGATCY	9 cut(s)	412, 535, 573, 779, 2060, 3289, 3956, 5000, 6207
BstXI	CCANNNNNNTGG	4 cut(s)	1639, 2251, 5802, 7596
BstYI	RGATCY	9 cut(s)	412, 535, 573, 779, 2060, 3289, 3956, 5000, 6207
BstZ17I	GTATAC	1 cut(s)	4887
Bsu15I	ATCGAT	2 cut(s)	827, 3793
Bsu36I	CCTNAGG	2 cut(s)	936, 7241
BsuI	GTATCC	3 cut(s)	1569, 2354, 7447
BsuTUI	ATCGAT	2 cut(s)	827, 3793
BtgI	CCRYGG	5 cut(s)	229, 4729, 7396, 7644, 8153
BtgZI	GCGATG	3 cut(s)	25, 757, 7077
BtsI	GCAGTG	4 cut(s)	1651, 6081, 7201, 7641
BveI	ACCTGC	5 cut(s)	1211, 3017, 4217, 5670, 6135
CaiI	CAGNNNCTG	4 cut(s)	2585, 4009, 4213, 6830
CciI	TCATGA	1 cut(s)	1683
CfoI	GCGC	6 cut(s)	107, 245, 1838, 4581, 7476, 7993
Cfr10I	RCCGGY	3 cut(s)	3550, 4371, 7284
ClaI	ATCGAT	2 cut(s)	827, 3793
CseI	GACGC	3 cut(s)	39, 208, 6335
CspAI	ACCGGT	2 cut(s)	4371, 7284
CspCI	CAANNNNNGTGG	4 cut(s)	2931, 2966, 7945, 7980
DraI	TTTAAA	3 cut(s)	480, 3690, 4093
DrdI	GACNNNNNNGTC	1 cut(s)	1540
DriI	GACNNNNNGTC	1 cut(s)	2833
DseDI	GACNNNNNNGTC	1 cut(s)	1540
EaeI	YGGCCR	4 cut(s)	3, 3000, 4200, 6383
Eam1104I	CTCTTC	6 cut(s)	2310, 2682, 4267, 5697, 6415, 6989
Eam1105I	GACNNNNNGTC	1 cut(s)	2833
EarI	CTCTTC	6 cut(s)	2310, 2682, 4267, 5697, 6415, 6989
EciI	GGCGGA	1 cut(s)	2336
Ecl136II	GAGCTC	3 cut(s)	28, 1984, 3945
Eco105I	TACGTA	2 cut(s)	1042, 5162
Eco147I	AGGCCT	4 cut(s)	4073, 4238, 6480, 6770
Eco24I	GRGCYC	5 cut(s)	30, 1986, 3947, 4042, 7609
Eco31I	GGTCTC	4 cut(s)	1526, 2600, 3509, 4952
Eco32I	GATATC	2 cut(s)	1526, 7096
Eco47I	GGWCC	9 cut(s)	332, 711, 1166, 1749, 2866, 4369, 4900, 6371, 7641
Eco53kI	GAGCTC	3 cut(s)	28, 1984, 3945
Eco81I	CCTNAGG	2 cut(s)	936, 7241
Eco88I	CYCGRG	1 cut(s)	1979
Eco91I	GGTNACC	1 cut(s)	7670
EcoICRI	GAGCTC	3 cut(s)	28, 1984, 3945
EcoNI	CCTNNNNNAGG	1 cut(s)	4978
EcoO109I	RGGNCCY	4 cut(s)	4038, 4039, 4971, 6371
EcoO65I	GGTNACC	1 cut(s)	7670
EcoRI	GAATTC	2 cut(s)	1647, 3707
EcoRV	GATATC	2 cut(s)	1526, 7096
EcoT22I	ATGCAT	8 cut(s)	1410, 1553, 1573, 1802, 3471, 4760, 6623, 7887
EcoT38I	GRGCYC	5 cut(s)	30, 1986, 3947, 4042, 7609
Esp3I	CGTCTC	2 cut(s)	3242, 5783
FaqI	GGGAC	6 cut(s)	125, 580, 697, 1047, 4382, 6562
FauI	CCCGC	1 cut(s)	5625
FauNDI	CATATG	2 cut(s)	3188, 6445
FbaI	TGATCA	5 cut(s)	2692, 2971, 6892, 6913, 7483
FblI	GTMKAC	1 cut(s)	4886
FriOI	GRGCYC	5 cut(s)	30, 1986, 3947, 4042, 7609
GlaI	GCGC	6 cut(s)	106, 244, 1837, 4580, 7475, 7992
GsaI	CCCAGC	3 cut(s)	4301, 7013, 7307
GsuI	CTGGAG	3 cut(s)	1096, 3476, 7533
HapII	CCGG	9 cut(s)	31, 216, 290, 1112, 3551, 4372, 5208, 6219, 7285
HgaI	GACGC	3 cut(s)	39, 208, 6335
HhaI	GCGC	6 cut(s)	107, 245, 1838, 4581, 7476, 7993
Hin1I	GRCGYC	3 cut(s)	81, 219, 798
Hin6I	GCGC	6 cut(s)	105, 243, 1836, 4579, 7474, 7991
HinP1I	GCGC	6 cut(s)	105, 243, 1836, 4579, 7474, 7991
HincII	GTYRAC	3 cut(s)	2983, 4054, 6528
HindII	GTYRAC	3 cut(s)	2983, 4054, 6528
HindIII	AAGCTT	4 cut(s)	1739, 2945, 5244, 6153
HpaII	CCGG	9 cut(s)	31, 216, 290, 1112, 3551, 4372, 5208, 6219, 7285
Hpy99I	CGWCG	4 cut(s)	83, 86, 7317, 8094
Hsp92I	GRCGYC	3 cut(s)	81, 219, 798
HspAI	GCGC	6 cut(s)	105, 243, 1836, 4579, 7474, 7991
Kpn2I	TCCGGA	1 cut(s)	1111
KpnI	GGTACC	2 cut(s)	3245, 7784
Ksp22I	TGATCA	5 cut(s)	2692, 2971, 6892, 6913, 7483
LguI	GCTCTTC	1 cut(s)	6415
MfeI	CAATTG	3 cut(s)	1236, 1781, 6027
MflI	RGATCY	9 cut(s)	412, 535, 573, 779, 2060, 3289, 3956, 5000, 6207
MhlI	GDGCHC	7 cut(s)	30, 364, 1986, 3947, 4042, 6008, 7609
MlsI	TGGCCA	3 cut(s)	5, 3002, 4202
MluNI	TGGCCA	3 cut(s)	5, 3002, 4202
MlyI	GAGTC	8 cut(s)	503, 672, 1882, 2216, 2315, 4743, 7073, 7789
MmeI	TCCRAC	9 cut(s)	1159, 1234, 1329, 2882, 3979, 7295, 7630, 7743, 8026
Mox20I	TGGCCA	3 cut(s)	5, 3002, 4202
Mph1103I	ATGCAT	8 cut(s)	1410, 1553, 1573, 1802, 3471, 4760, 6623, 7887
MroI	TCCGGA	1 cut(s)	1111
MroXI	GAANNNNTTC	7 cut(s)	1647, 2319, 2886, 3666, 6714, 6857, 7689
MscI	TGGCCA	3 cut(s)	5, 3002, 4202
Msp20I	TGGCCA	3 cut(s)	5, 3002, 4202
MspA1I	CMGCKG	9 cut(s)	2627, 2757, 3535, 4006, 4193, 6788, 6827, 7009, 7592
MspCI	CTTAAG	3 cut(s)	1016, 1468, 7085
MspI	CCGG	9 cut(s)	31, 216, 290, 1112, 3551, 4372, 5208, 6219, 7285
MunI	CAATTG	3 cut(s)	1236, 1781, 6027
Mva1269I	GAATGC	7 cut(s)	267, 508, 1500, 2456, 4106, 4258, 4758
MvnI	CGCG	5 cut(s)	50, 105, 155, 245, 7991
NciI	CCSGG	3 cut(s)	32, 216, 5209
NcoI	CCATGG	4 cut(s)	229, 4729, 7644, 8153
NdeI	CATATG	2 cut(s)	3188, 6445
NheI	GCTAGC	4 cut(s)	3058, 3554, 6328, 7996
NmeAIII	GCCGAG	1 cut(s)	2375
NmuCI	GTSAC	8 cut(s)	472, 794, 1413, 1542, 1889, 5312, 7196, 7670
NsiI	ATGCAT	8 cut(s)	1410, 1553, 1573, 1802, 3471, 4760, 6623, 7887
NspV	TTCGAA	1 cut(s)	2812
OliI	CACNNNNGTG	2 cut(s)	2717, 7395
PaeI	GCATGC	5 cut(s)	400, 1821, 3473, 5389, 6625
PaeR7I	CTCGAG	1 cut(s)	1979
PagI	TCATGA	1 cut(s)	1683
PaqCI	CACCTGC	1 cut(s)	5670
PasI	CCCWGGG	1 cut(s)	4042
PceI	AGGCCT	4 cut(s)	4073, 4238, 6480, 6770
PciI	ACATGT	6 cut(s)	1144, 1249, 1726, 3565, 4924, 5307
PciSI	GCTCTTC	1 cut(s)	6415
PctI	GAATGC	7 cut(s)	267, 508, 1500, 2456, 4106, 4258, 4758
PdmI	GAANNNNTTC	7 cut(s)	1647, 2319, 2886, 3666, 6714, 6857, 7689
Pfl23II	CGTACG	1 cut(s)	1042
PflFI	GACNNNGTC	1 cut(s)	1895
PflMI	CCANNNNNTGG	1 cut(s)	6607
PfoI	TCCNGGA	3 cut(s)	30, 497, 6812
PinAI	ACCGGT	2 cut(s)	4371, 7284
PleI	GAGTC	8 cut(s)	502, 672, 1881, 2215, 2314, 4742, 7073, 7789
PpsI	GAGTC	8 cut(s)	502, 672, 1881, 2215, 2314, 4742, 7073, 7789
Ppu21I	YACGTR	5 cut(s)	1042, 4387, 5026, 5162, 7136
PpuMI	RGGWCCY	1 cut(s)	6371
PscI	ACATGT	6 cut(s)	1144, 1249, 1726, 3565, 4924, 5307
PshAI	GACNNNNGTC	2 cut(s)	2864, 7919
PshBI	ATTAAT	4 cut(s)	1130, 2430, 3452, 8096
Psp124BI	GAGCTC	3 cut(s)	30, 1986, 3947
Psp5II	RGGWCCY	1 cut(s)	6371
PspEI	GGTNACC	1 cut(s)	7670
PspFI	CCCAGC	3 cut(s)	4297, 7009, 7303
PspLI	CGTACG	1 cut(s)	1042
PspOMI	GGGCCC	1 cut(s)	4038
PspPPI	RGGWCCY	1 cut(s)	6371
PspXI	VCTCGAGB	1 cut(s)	1979
PsrI	GAACNNNNNNTAC	2 cut(s)	5026, 5058
PstI	CTGCAG	5 cut(s)	3378, 5529, 5614, 6276, 7636
PstNI	CAGNNNCTG	4 cut(s)	2585, 4009, 4213, 6830
PsuI	RGATCY	9 cut(s)	412, 535, 573, 779, 2060, 3289, 3956, 5000, 6207
PsyI	GACNNNGTC	1 cut(s)	1895
PvuII	CAGCTG	5 cut(s)	2627, 2757, 3535, 6827, 7592
SacI	GAGCTC	3 cut(s)	30, 1986, 3947
SapI	GCTCTTC	1 cut(s)	6415
ScaI	AGTACT	5 cut(s)	1612, 2355, 2787, 3436, 7875
SchI	GAGTC	8 cut(s)	503, 672, 1882, 2216, 2315, 4743, 7073, 7789
SduI	GDGCHC	7 cut(s)	30, 364, 1986, 3947, 4042, 6008, 7609
SfcI	CTRYAG	8 cut(s)	1519, 3374, 5525, 5610, 6272, 6839, 7632, 8073
Sfr274I	CTCGAG	1 cut(s)	1979
SfuI	TTCGAA	1 cut(s)	2812
SinI	GGWCC	9 cut(s)	332, 711, 1166, 1749, 2866, 4369, 4900, 6371, 7641
SlaI	CTCGAG	1 cut(s)	1979
SnaBI	TACGTA	2 cut(s)	1042, 5162
SpeI	ACTAGT	2 cut(s)	3664, 6101
SphI	GCATGC	5 cut(s)	400, 1821, 3473, 5389, 6625
SseBI	AGGCCT	4 cut(s)	4073, 4238, 6480, 6770
SspI	AATATT	3 cut(s)	1342, 6314, 6361
SstI	GAGCTC	3 cut(s)	30, 1986, 3947
StuI	AGGCCT	4 cut(s)	4073, 4238, 6480, 6770
TaqII	GACCGA	2 cut(s)	251, 7689
TatI	WGTACW	9 cut(s)	1099, 1610, 2353, 2359, 2785, 3106, 3434, 3628, 7873
TauI	GCSGC	4 cut(s)	47, 50, 4009, 7009
TseFI	GTSAC	8 cut(s)	472, 794, 1413, 1542, 1889, 5312, 7196, 7670
Tsp45I	GTSAC	8 cut(s)	472, 794, 1413, 1542, 1889, 5312, 7196, 7670
TspGWI	ACGGA	9 cut(s)	287, 1060, 1915, 2073, 4602, 4661, 6865, 7203, 7270
Tth111I	GACNNNGTC	1 cut(s)	1895
Van91I	CCANNNNNTGG	1 cut(s)	6607
Vha464I	CTTAAG	3 cut(s)	1016, 1468, 7085
VpaK11BI	GGWCC	9 cut(s)	332, 711, 1166, 1749, 2866, 4369, 4900, 6371, 7641
VspI	ATTAAT	4 cut(s)	1130, 2430, 3452, 8096
XagI	CCTNNNNNAGG	1 cut(s)	4978
XbaI	TCTAGA	3 cut(s)	2390, 3175, 4418
XcmI	CCANNNNNNNNNTGG	2 cut(s)	4736, 6654
XhoI	CTCGAG	1 cut(s)	1979
XmiI	GTMKAC	1 cut(s)	4886
XmnI	GAANNNNTTC	7 cut(s)	1647, 2319, 2886, 3666, 6714, 6857, 7689
ZraI	GACGTC	2 cut(s)	82, 799
ZrmI	AGTACT	5 cut(s)	1612, 2355, 2787, 3436, 7875
Zsp2I	ATGCAT	8 cut(s)	1410, 1553, 1573, 1802, 3471, 4760, 6623, 7887

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.