Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002113

Physical Location & Seq

Genomic Coordinates Reverse (-)

16953515 .. 16961245

Gene Structure 7731 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G42400.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4167 bp

ATGGTTGCGGTTGATTCCACTTTTCCTAGCCATGGTAGCTCTTATTCTAGTAGAAGGAAGAAAGTTTCTGCTTTGGAACCGAATTATTTCGGTTCAATGTGTATGGGAGTTTACAGTGATGATGTTTCAATCTCTGCAAGAGAAGTAGCTCAAGATTACTCTTGTGACAGCTGTGGTGATTTGGCTACTGTATCTTCCGCTTGTTGCAATTTTGATGAACTGTGTGGTTTGGATTCAGCCTTGGAGATGGGATGTCGTTCAAATGAAGACTGTCGTGCGGGTCAAGAGGCTTCTGGTAGTGGCATAGCTTCAGGTCTAGACAAGAGTGTTCCAGGGTATACCATGTATGCAAGTGGTTGGATGTATGGTAATCAGCAAGGTCAGATGTGTGGCCCTTACACGCAACAGCAGCTATATGATGGGCTATCAACTAACTTCTTACCGGAGGATCTTCTTGTATATCCAATTATCAATGGTTATACTGCAAATTCTGTACCACTTAAGTACTTCAAGCAGTTTCCAGATCATGTCGCTACTGGCTTTGCATATCTACAAAATGGAATAATAAGTGTAGCCCCATCTGTTACTTCATTTCCCCCTTCTAGTAGTAATGCTACAGTCCATCAAGATGAGATTCAAACAGAGCATGCAACTTCTGCTACTCATTTGATCTCCCATCAGACGATGCCTCCACAGACAAGTTCTAATGGTTCTGTTTTAGATCAGCTAACACTAAACCACGAGGAATCAAATATGTTAGCTTCATTCCTCTCATTGGGAAACGAACATGCTTGCTGGTTTCTCGTTGATGGTGAAGGTAGAAATCATGGTCCACATTCTATATTGGAGCTTTTTAGTTGGCAGCAGCATGGATATGTTTCAGATGCAGCCCTGATACGTGATGGTGAAAATAAGCTTAGACCAATCACATTAGCATCGTTAATTGGTGTATGGAGGGTGAAATGTGGTGATGCTAATTGTGACGAGCCAGTGACTGGCGTGAACTTCATATCCGAAGTTTCGGAAGAACTCTCTGTTCATCTTCAGAGTGGAATAATGAAAATAGCTAGAAGAGCTCTACTCGATGAAATCATCAGCAGTGTGATTTCAGACTTTCTGAAGGCCAAGAAAAGTGATGAGCATCTCAAGTCTTATCCACCCACTTCTGCTGTTGAATCCATATCGTCTCGGGTTATTAATGCGGAGAAAAGTGTTGTCTCAAACACTGAATCTGCAGGCTGTAAGAATACAATGAATGAGGGGGGTCATAGTAGTATAGCTGCAGAGTCGTCCAAATATACTAAATCTGTTGGAAGCATTGAGAACTTTCAGACATCTTGCTCAGCTGTGTGTAGAACGCTTCACCACCATTGCATGCAAATCATGTGGAATGCAGTCTTTTATGATACTGTGGCAACTCATTCATCATGTTGGAGAAAGAACAAAATTTGGTTTCGGTCTTCTGATATCTCGACTGTTAATTACTGCAAAGGTTCCCATACAAAGTATTCAGACAAACCTGAATCATTTGAGAGTTTTACTTGTAGGGTGGATTCCTCTTCCTCTAAAACTGCTTACTCTGATGAATTCGACTTAGCTACCAATGGAGCCAGAGTTCGTGGATTGTCATCAGATACTTATGGAACGGAAAGTGTCATAGCAAGCATCTCAGAACATGTTGAAAATGAACTCTTTCTGTCTCTTAAAACTCACCTAACTGATTATACTAGTATTCTCATTAAAGATGGAGCGAATAATACTACTAGTAGTGCACGAGATGGCAAAATGCATGAGGAAAACCCGCCATCTCTTCAGGGTTCCTTCCGTGAGCAGTATAATTTGGAAGGGTCTAGTAAAAAGAAGAATGGCTTAAATGTGGTTCCTGCTAAGTTGCGGTTTTCCAATGATTTCAGTGATTCTCAGAGACTGTTGCAAGAGGGAGAATCCTCCGAGCAAATCACATCTGAAGATATTATTGCTAATATTTTTAGTACAGCATTGGAGACATCAGATATTCCTGTTAATGATGAACTTGATGCTCTGGCCATTCATGAGCCACCACCACCTGGATGTGAAAGCAATATTAATATGCCATGTCTGCGCTATAAGTATCAGCCTGTTAGGTCCAAGGAATCCATTCCAGAGATTAAAGCATATGTTTCAATGGCATTATGTAGACAGAAGTTGCACAATGATGTTATGAGAGATTGGAAATCACTGTTCTTAAAGTGTTATCTCAACGAATTCCTTGCTTCACTGAAAGGAAGCCATCAAGTTTCTCGTAAAGAAACATTGGCACTGAAGAAGCGCAAAACTGTTACTCGGAACAAAAAGCTGGTACAGTCTAATATATCAAATCAGACAGCAGAAAAGCTAAGGAAACCATGTGTCGGAGCGTCTGAAAAAGTTCTGGTTAAACGATCTAAGAAACTGTCAGATTCTCACTCCATGAAAGAAGTCCTTAAAGTCGATACACCCAGTATAGATTTGTCAGTTCGGAAACCAAGTCAACAGAAGATGAGGAATACTGACCGGCGGGATCATTGTATCATAAAGGATGCGACGAAGCTCCATAAAGAAAAGGTTGGTAAAGATGCGTTTAGTAAGGTGATCTGTGATAAAAGCCAAGATCTTGAAATGGAAGATGAATTTGATGACGCACTCCTTATAACAAGACTAAGAAGAATATCTAGGAATAAAACAAAAGAGTTAAGAGAATGTAGAAACGCTGCAAAATCATGTGAGGAGATTTCAGTGACTGCTGAGGAATCTGAGGAAACCGTTGACTGCAAAGATCATGAGGAGAGTCTTTCAAATAAGCCTTCTCAGAAAGTGAAAAAAGCTCATACATCAAAGCTAAAGAGAAAGAATCTGTCAGATGCTAGAGACGAAGGTACAAAATCTTGCAATGGAGCAGTCAAAAGTTTTACTGAGATTTCTGGAAAGGAGGGTGATACAGAAAGCCTTGGATTAGCAATCAGTGACAAGGTTTCCCATCAAAATCTCAGCAAGAGACGGAAAAAAGATGCAGCGAAGAATGGTCAGGATATGTCAAACCCTACTGGTAATCCTCCAAGACTCGCTGAAGGAAAAAAGTTTGTGGAAAAGTCTGCGTGCAGTATATCACAGAAGGGCCGTAAGTCGTCCCAATCCTCAATTCTAAAAAGAAAGCACCAGTTGGATGAAAAAATCTCCAATGTACCTTCACGTCGGAGGTTATCTCTCTCTTCCACGGATTCTGAGGATGCTGTTATTAAGGAAGACTATGATGTTCGAAATGAAGAGAAGCTTCCCTGTCATACATCAGATAAGCTGCAAAAAGTAGGTCCAAATAAATTGATACGTAGAAGGAAGCCATTAGCAAAACATACAACAGAACGTTCTCCAATTAAGGATTTGTCAGTGGATGATGGCAGGCCTAAGCCGATTGCATTAAAACCATTGGAAAAACTGAGTTCGAAACCAAGCAAGAAAAAGCTGTTTTTGTCAATCCCAAAGTCTGATGGATGTGCACGCACATCTATTAATGGTTGGCATTGGCATGCATGGTCATTAAAGGCCAGTGCTGAAGAGAGAGCCCGTGTTAGGGGAAGTTCTTGCGTACACATGCAACATTTTGGTTCCAAAAGTAGTTTGACTCAGAACGTTCTTTCTGCAAGAACTAATAGGGCAAAACTGCGTAATCTTTTAGCTGCTGCAGATGGGGCTGATGTCTTGAAAATGTCTCAGTTGAAGGCTAGGAAAAAGCATTTACGGTTTCAACAAAGCAAGATTCATGATTGGGGTCTTGTCGCACTTGAACCGATTGAAGCTGAAGACTTTGTGATCGAATATGTTGGAGAGTTGATACGTTCTTCTATATCTGAGATACGTGAACGCCAATATGAAAAGATGGGAATAGGAAGCAGTTATCTTTTCAGGCTTGACGATGGCTATGTGCTTGATGCCACAAAGCGAGGTGGCATAGCGAGGTTTATCAACCATTCATGTGAGCCGAACTGTTACACCAAGATTATAAGCGTAGAAGGTAAGAAAAAGATATTCATTTATGCTAAGCGGCATATAGACGCCGGTGAAGAAATAAGTTACAACTACAAGTTCCCATTGGAGGACGACAAAATCCCCTGTAACTGTGGAGCGCCAAAGTGCCGTGGATCGCTAAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006325 GO:0006464 GO:0006479 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008213 GO:0009791 GO:0009909 GO:0009987 GO:0010228 GO:0010452 GO:0016043 GO:0016569 GO:0016570 GO:0016571 GO:0018022 GO:0018193 GO:0018205 GO:0019538 GO:0022414 GO:0032259 GO:0032501 GO:0032502 GO:0034968 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048580 GO:0048608 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0051239 GO:0051276 GO:0051568 GO:0061458 GO:0065007 GO:0071704 GO:0071840 GO:1901564 GO:2000026 GO:2000241

KEGG Pathways

Metabolic & Signaling

ko00310 map00310

Pfam Domains

Protein Families

SET

Protein Analysis

1388

Amino Acids

154.27

Weight (kDa)

8.6

Isoelectric Point (pI)

46.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SET	PF00856	1261 - 1366	2e-26	SET domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0002113)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G42400 AT5G42400 AT5G42400 AT5G42400 AT5G42400 AT5G42400 AT5G42400 AT5G42400
fragaria_vesca	FvH4_5g26810 FvH4_5g26810 FvH4_5g26810 FvH4_5g26810 FvH4_5g26810 FvH4_5g26810 FvH4_5g26810 FvH4_5g26810 FvH4_5g26810 FvH4_5g26810 FvH4_5g26810 FvH4_5g26810 FvH4_5g26810 FvH4_5g26810 FvH4_5g26810
malus_domestica	MD02G1278400.v1.1 MD07G1046400.v1.1 MD07G1046500.v1.1
prunus_persica	Prupe.2G042400_v2.0.a1 Prupe.2G042400_v2.0.a1 Prupe.2G042400_v2.0.a1 Prupe.2G042400_v2.0.a1 Prupe.2G042400_v2.0.a1
pyrus_communis	pycom02g23860
rosa_chinensis	RchiOBHm_Chr7g0217731
rosa_laevigata	RLG00000002444
rosa_multiflora	Rmu_co8471317.1_g000001 Rmu_sc0000202.1_g000011
rosa_roxburghii	Rroxscaffold_3G00241740
rosa_rugosa	Rorug07G0170800 Rorug07G0170800
rosa_samantha	Rh7AG311300 Rh7BG303200 Rh7CG330300 Rh7DG311100
rosa_wichuraiana	Rw7G026430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	2669, 4016
AccB7I	CCANNNNNTGG	2 cut(s)	995, 2066
AccI	GTMKAC	2 cut(s)	338, 2176
AciI	CCGC	8 cut(s)	8, 198, 278, 1202, 1802, 1894, 2536, 4057
AclI	AACGTT	2 cut(s)	3379, 3645
AclWI	GGATC	3 cut(s)	456, 2547, 4162
AcoI	YGGCCR	1 cut(s)	2043
AcsI	RAATTY	5 cut(s)	487, 1446, 1586, 2243, 2648
AcuI	CTGAAG	9 cut(s)	294, 1028, 1139, 1796, 1986, 2321, 3105, 3588, 3834
AcyI	GRCGYC	1 cut(s)	4068
AfaI	GTAC	7 cut(s)	495, 506, 1993, 2340, 2896, 3201, 3603
AfiI	CCNNNNNNNGG	8 cut(s)	32, 775, 995, 2066, 2390, 3585, 3586, 4108
AflII	CTTAAG	1 cut(s)	500
AflIII	ACRYGT	1 cut(s)	1675
AhlI	ACTAGT	2 cut(s)	1727, 1763
AjiI	CACGTC	1 cut(s)	3209
AjnI	CCWGG	2 cut(s)	331, 2065
AjuI	GAANNNNNNNTTGG	2 cut(s)	3141, 3173
AloI	GAACNNNNNNTCC	4 cut(s)	995, 1027, 1599, 1631
Alw21I	GWGCWC	3 cut(s)	1078, 1774, 3514
Alw26I	GTCTC	8 cut(s)	1191, 1222, 1704, 1918, 1997, 2880, 3007, 3729
Alw44I	GTGCAC	2 cut(s)	1770, 3510
AlwI	GGATC	3 cut(s)	456, 2547, 4162
AlwNI	CAGNNNCTG	3 cut(s)	995, 1927, 2759
Ama87I	CYCGRG	1 cut(s)	1188
AoxI	GGCC	6 cut(s)	391, 1122, 2043, 3133, 3416, 3558
ApaLI	GTGCAC	2 cut(s)	1770, 3510
ApoI	RAATTY	5 cut(s)	487, 1446, 1586, 2243, 2648
ArsI	GACNNNNNNTTYG	2 cut(s)	3310, 3342
AseI	ATTAAT	3 cut(s)	1197, 2085, 3525
Asp700I	GAANNNNTTC	4 cut(s)	86, 1692, 2136, 2406
AspLEI	GCGC	3 cut(s)	2103, 2310, 4141
AspS9I	GGNCC	5 cut(s)	392, 830, 2124, 3133, 3326
AsuII	TTCGAA	2 cut(s)	3274, 3458
AvaI	CYCGRG	1 cut(s)	1188
AvaII	GGWCC	3 cut(s)	830, 2124, 3326
BaeGI	GKGCMC	2 cut(s)	1774, 3514
BalI	TGGCCA	1 cut(s)	2045
BanII	GRGCYC	2 cut(s)	1078, 3580
BauI	CACGAG	2 cut(s)	740, 1773
BbsI	GAAGAC	4 cut(s)	273, 1452, 3267, 3822
Bbv12I	GWGCWC	3 cut(s)	1078, 1774, 3514
BbvCI	CCTCAGC	1 cut(s)	2763
BceAI	ACGGC	2 cut(s)	3120, 4134
BcgI	CGANNNNNNTGC	2 cut(s)	2231, 2265
BciT130I	CCWGG	2 cut(s)	333, 2067
BcoDI	GTCTC	8 cut(s)	1191, 1222, 1704, 1918, 1997, 2880, 3007, 3729
BcuI	ACTAGT	2 cut(s)	1727, 1763
BfmI	CTRYAG	4 cut(s)	615, 1233, 1281, 3696
BfoI	RGCGCY	1 cut(s)	4142
BfrI	CTTAAG	1 cut(s)	500
BglII	AGATCT	1 cut(s)	2629
BlpI	GCTNAGC	2 cut(s)	1342, 4053
BmcAI	AGTACT	1 cut(s)	506
Bme1390I	CCNGG	2 cut(s)	333, 2067
Bme18I	GGWCC	3 cut(s)	830, 2124, 3326
BmeT110I	CYCGRG	1 cut(s)	1188
BmgBI	CACGTC	1 cut(s)	3209
BmgT120I	GGNCC	5 cut(s)	392, 830, 2124, 3133, 3326
BmiI	GGNNCC	6 cut(s)	78, 1495, 1609, 1819, 1881, 3622
BmrFI	CCNGG	2 cut(s)	333, 2067
BmrI	ACTGGG	1 cut(s)	2472
BmuI	ACTGGG	1 cut(s)	2472
BpiI	GAAGAC	4 cut(s)	273, 1452, 3267, 3822
BplI	GAGNNNNNCTC	4 cut(s)	1065, 1097, 3205, 3237
Bpu10I	CCTNAGC	3 cut(s)	2375, 2763, 3420
Bpu1102I	GCTNAGC	2 cut(s)	1342, 4053
Bpu14I	TTCGAA	2 cut(s)	3274, 3458
BpuEI	CTTGAG	2 cut(s)	135, 1130
BsaAI	YACGTR	3 cut(s)	899, 3344, 3872
BsaBI	GATNNNNATC	2 cut(s)	1140, 1627
BsaHI	GRCGYC	1 cut(s)	4068
BsaJI	CCNNGG	7 cut(s)	31, 240, 332, 2127, 2965, 3231, 4150
BsaWI	WCCGGW	1 cut(s)	442
BsaXI	ACNNNNNCTCC	4 cut(s)	673, 703, 1599, 1629
Bsc4I	CCNNNNNNNGG	8 cut(s)	32, 775, 995, 2066, 2390, 3585, 3586, 4108
Bse118I	RCCGGY	2 cut(s)	2532, 4070
Bse1I	ACTGG	7 cut(s)	541, 989, 1000, 2478, 3067, 3175, 3561
Bse3DI	GCAATG	2 cut(s)	1369, 2914
Bse8I	GATNNNNATC	2 cut(s)	1140, 1627
BseBI	CCWGG	2 cut(s)	333, 2067
BseDI	CCNNGG	7 cut(s)	31, 240, 332, 2127, 2965, 3231, 4150
BseGI	GGATG	8 cut(s)	257, 366, 2075, 2563, 3187, 3250, 3412, 3512
BseJI	GATNNNNATC	2 cut(s)	1140, 1627
BseLI	CCNNNNNNNGG	8 cut(s)	32, 775, 995, 2066, 2390, 3585, 3586, 4108
BseMI	GCAATG	2 cut(s)	1369, 2914
BseNI	ACTGG	7 cut(s)	541, 989, 1000, 2478, 3067, 3175, 3561
BseRI	GAGGAG	2 cut(s)	2759, 2816
BseSI	GKGCMC	2 cut(s)	1774, 3514
BsgI	GTGCAG	1 cut(s)	3136
BshFI	GGCC	6 cut(s)	393, 1124, 2045, 3135, 3418, 3560
BsiHKAI	GWGCWC	3 cut(s)	1078, 1774, 3514
BsiHKCI	CYCGRG	1 cut(s)	1188
BsiSI	CCGG	3 cut(s)	443, 2533, 4071
BslFI	GGGAC	1 cut(s)	3130
BslI	CCNNNNNNNGG	8 cut(s)	32, 775, 995, 2066, 2390, 3585, 3586, 4108
BsmAI	GTCTC	8 cut(s)	1191, 1222, 1704, 1918, 1997, 2880, 3007, 3729
BsmBI	CGTCTC	3 cut(s)	1191, 2880, 3007
BsmFI	GGGAC	1 cut(s)	3130
BsmI	GAATGC	1 cut(s)	1396
BsnI	GGCC	6 cut(s)	393, 1124, 2045, 3135, 3418, 3560
BsoBI	CYCGRG	1 cut(s)	1188
Bsp119I	TTCGAA	2 cut(s)	3274, 3458
Bsp1286I	GDGCHC	4 cut(s)	1078, 1774, 3514, 3580
Bsp1720I	GCTNAGC	2 cut(s)	1342, 4053
Bsp19I	CCATGG	1 cut(s)	31
BspACI	CCGC	8 cut(s)	8, 198, 278, 1202, 1802, 1894, 2536, 4057
BspANI	GGCC	6 cut(s)	393, 1124, 2045, 3135, 3418, 3560
BspHI	TCATGA	3 cut(s)	2050, 2797, 3775
BspLI	GGNNCC	6 cut(s)	78, 1495, 1609, 1819, 1881, 3622
BspMAI	CTGCAG	3 cut(s)	1237, 1285, 3700
BspPI	GGATC	3 cut(s)	456, 2547, 4162
BspQI	GCTCTTC	1 cut(s)	1066
BspT104I	TTCGAA	2 cut(s)	3274, 3458
BspTI	CTTAAG	1 cut(s)	500
BsrDI	GCAATG	2 cut(s)	1369, 2914
BsrFI	RCCGGY	2 cut(s)	2532, 4070
BsrI	ACTGG	7 cut(s)	541, 989, 1000, 2478, 3067, 3175, 3561
BssAI	RCCGGY	2 cut(s)	2532, 4070
BssECI	CCNNGG	7 cut(s)	31, 240, 332, 2127, 2965, 3231, 4150
BssNAI	GTATAC	1 cut(s)	339
BssNI	GRCGYC	1 cut(s)	4068
BssSI	CACGAG	2 cut(s)	740, 1773
BssT1I	CCWWGG	4 cut(s)	31, 240, 2127, 2965
Bst1107I	GTATAC	1 cut(s)	339
Bst2BI	CACGAG	2 cut(s)	740, 1773
Bst2UI	CCWGG	2 cut(s)	333, 2067
Bst6I	CTCTTC	6 cut(s)	1066, 1564, 1815, 3232, 3276, 3564
BstACI	GRCGYC	1 cut(s)	4068
BstAFI	CTTAAG	1 cut(s)	500
BstAPI	GCANNNNNTGC	1 cut(s)	656
BstBAI	YACGTR	3 cut(s)	899, 3344, 3872
BstBI	TTCGAA	2 cut(s)	3274, 3458
BstC8I	GCNNGC	9 cut(s)	648, 793, 1237, 1376, 1663, 3115, 3416, 3514, 3543
BstDSI	CCRYGG	3 cut(s)	31, 3231, 4150
BstF5I	GGATG	8 cut(s)	257, 366, 2075, 2563, 3187, 3250, 3412, 3512
BstH2I	RGCGCY	1 cut(s)	4142
BstHHI	GCGC	3 cut(s)	2103, 2310, 4141
BstMAI	GTCTC	8 cut(s)	1191, 1222, 1704, 1918, 1997, 2880, 3007, 3729
BstMWI	GCNNNNNNNGC	6 cut(s)	36, 409, 656, 1073, 2098, 3704
BstNI	CCWGG	2 cut(s)	333, 2067
BstNSI	RCATGY	6 cut(s)	650, 791, 1378, 1679, 3545, 3610
BstSCI	CCNGG	2 cut(s)	331, 2065
BstSFI	CTRYAG	4 cut(s)	615, 1233, 1281, 3696
BstSLI	GKGCMC	2 cut(s)	1774, 3514
BstSNI	TACGTA	1 cut(s)	3344
BstV2I	GAAGAC	4 cut(s)	273, 1452, 3267, 3822
BstX2I	RGATCY	2 cut(s)	448, 2629
BstYI	RGATCY	2 cut(s)	448, 2629
BstZ17I	GTATAC	1 cut(s)	339
BsuRI	GGCC	6 cut(s)	393, 1124, 2045, 3135, 3418, 3560
BtgI	CCRYGG	3 cut(s)	31, 3231, 4150
BtrI	CACGTC	1 cut(s)	3209
BtsCI	GGATG	8 cut(s)	257, 366, 2075, 2563, 3187, 3250, 3412, 3512
BtsI	GCAGTG	1 cut(s)	1105
Cac8I	GCNNGC	9 cut(s)	648, 793, 1237, 1376, 1663, 3115, 3416, 3514, 3543
CaiI	CAGNNNCTG	3 cut(s)	995, 1927, 2759
CciI	TCATGA	3 cut(s)	2050, 2797, 3775
CfoI	GCGC	3 cut(s)	2103, 2310, 4141
Cfr10I	RCCGGY	2 cut(s)	2532, 4070
Cfr13I	GGNCC	5 cut(s)	392, 830, 2124, 3133, 3326
CseI	GACGC	3 cut(s)	2385, 2666, 4076
Csp6I	GTAC	7 cut(s)	494, 505, 1992, 2339, 2895, 3200, 3602
CspCI	CAANNNNNGTGG	2 cut(s)	1367, 1402
CviQI	GTAC	7 cut(s)	494, 505, 1992, 2339, 2895, 3200, 3602
EaeI	YGGCCR	1 cut(s)	2043
Eam1104I	CTCTTC	6 cut(s)	1066, 1564, 1815, 3232, 3276, 3564
EarI	CTCTTC	6 cut(s)	1066, 1564, 1815, 3232, 3276, 3564
Ecl136II	GAGCTC	1 cut(s)	1076
Eco105I	TACGTA	1 cut(s)	3344
Eco130I	CCWWGG	4 cut(s)	31, 240, 2127, 2965
Eco147I	AGGCCT	1 cut(s)	3418
Eco24I	GRGCYC	2 cut(s)	1078, 3580
Eco32I	GATATC	1 cut(s)	1468
Eco47I	GGWCC	3 cut(s)	830, 2124, 3326
Eco53kI	GAGCTC	1 cut(s)	1076
Eco57I	CTGAAG	9 cut(s)	294, 1028, 1139, 1796, 1986, 2321, 3105, 3588, 3834
Eco88I	CYCGRG	1 cut(s)	1188
EcoICRI	GAGCTC	1 cut(s)	1076
EcoRI	GAATTC	2 cut(s)	1586, 2243
EcoRII	CCWGG	2 cut(s)	331, 2065
EcoRV	GATATC	1 cut(s)	1468
EcoT14I	CCWWGG	4 cut(s)	31, 240, 2127, 2965
EcoT22I	ATGCAT	2 cut(s)	1791, 3547
EcoT38I	GRGCYC	2 cut(s)	1078, 3580
ErhI	CCWWGG	4 cut(s)	31, 240, 2127, 2965
Esp3I	CGTCTC	3 cut(s)	1191, 2880, 3007
FalI	AAGNNNNNCTT	6 cut(s)	1853, 1885, 2445, 2477, 3273, 3305
FaqI	GGGAC	1 cut(s)	3130
FauI	CCCGC	3 cut(s)	271, 1809, 2529
FauNDI	CATATG	1 cut(s)	2155
FblI	GTMKAC	2 cut(s)	338, 2176
FokI	GGATG	8 cut(s)	264, 373, 2082, 2570, 3194, 3257, 3419, 3519
FriOI	GRGCYC	2 cut(s)	1078, 3580
GlaI	GCGC	3 cut(s)	2102, 2309, 4140
HaeII	RGCGCY	1 cut(s)	4142
HaeIII	GGCC	6 cut(s)	393, 1124, 2045, 3135, 3418, 3560
HapII	CCGG	3 cut(s)	443, 2533, 4071
HgaI	GACGC	3 cut(s)	2385, 2666, 4076
HhaI	GCGC	3 cut(s)	2103, 2310, 4141
Hin1I	GRCGYC	1 cut(s)	4068
Hin6I	GCGC	3 cut(s)	2101, 2308, 4139
HinP1I	GCGC	3 cut(s)	2101, 2308, 4139
HincII	GTYRAC	2 cut(s)	2510, 2785
HindII	GTYRAC	2 cut(s)	2510, 2785
HindIII	AAGCTT	2 cut(s)	914, 3287
HpaII	CCGG	3 cut(s)	443, 2533, 4071
Hpy99I	CGWCG	2 cut(s)	2566, 3213
HpyCH4IV	ACGT	7 cut(s)	898, 3208, 3343, 3379, 3645, 3850, 3871
HpyF10VI	GCNNNNNNNGC	6 cut(s)	36, 409, 656, 1073, 2098, 3704
HpySE526I	ACGT	7 cut(s)	898, 3208, 3343, 3379, 3645, 3850, 3871
Hsp92I	GRCGYC	1 cut(s)	4068
HspAI	GCGC	3 cut(s)	2101, 2308, 4139
LguI	GCTCTTC	1 cut(s)	1066
LmnI	GCTCC	7 cut(s)	847, 1607, 1748, 2393, 2574, 2912, 4136
MaeII	ACGT	7 cut(s)	898, 3208, 3343, 3379, 3645, 3850, 3871
MflI	RGATCY	2 cut(s)	448, 2629
MhlI	GDGCHC	4 cut(s)	1078, 1774, 3514, 3580
MlsI	TGGCCA	1 cut(s)	2045
MluNI	TGGCCA	1 cut(s)	2045
MlyI	GAGTC	4 cut(s)	1295, 2815, 3072, 3631
MmeI	TCCRAC	7 cut(s)	338, 1291, 1412, 2371, 3159, 3191, 3817
Mox20I	TGGCCA	1 cut(s)	2045
Mph1103I	ATGCAT	2 cut(s)	1791, 3547
MroXI	GAANNNNTTC	4 cut(s)	86, 1692, 2136, 2406
MscI	TGGCCA	1 cut(s)	2045
MslI	CAYNNNNRTG	6 cut(s)	627, 873, 2068, 2193, 3540, 3987
Msp20I	TGGCCA	1 cut(s)	2045
MspA1I	CMGCKG	2 cut(s)	171, 1346
MspCI	CTTAAG	1 cut(s)	500
MspI	CCGG	3 cut(s)	443, 2533, 4071
MspR9I	CCNGG	2 cut(s)	333, 2067
Mva1269I	GAATGC	1 cut(s)	1396
MvaI	CCWGG	2 cut(s)	333, 2067
MwoI	GCNNNNNNNGC	6 cut(s)	36, 409, 656, 1073, 2098, 3704
NcoI	CCATGG	1 cut(s)	31
NdeI	CATATG	1 cut(s)	2155
NlaIV	GGNNCC	6 cut(s)	78, 1495, 1609, 1819, 1881, 3622
NmuCI	GTSAC	5 cut(s)	164, 980, 991, 2755, 2981
NsiI	ATGCAT	2 cut(s)	1791, 3547
NspI	RCATGY	6 cut(s)	650, 791, 1378, 1679, 3545, 3610
NspV	TTCGAA	2 cut(s)	3274, 3458
PaeI	GCATGC	3 cut(s)	650, 1378, 3545
PagI	TCATGA	3 cut(s)	2050, 2797, 3775
PceI	AGGCCT	1 cut(s)	3418
PciI	ACATGT	1 cut(s)	1675
PciSI	GCTCTTC	1 cut(s)	1066
PctI	GAATGC	1 cut(s)	1396
PdmI	GAANNNNTTC	4 cut(s)	86, 1692, 2136, 2406
PflMI	CCANNNNNTGG	2 cut(s)	995, 2066
PleI	GAGTC	4 cut(s)	1294, 2814, 3072, 3631
PpsI	GAGTC	4 cut(s)	1294, 2814, 3072, 3631
Ppu21I	YACGTR	3 cut(s)	899, 3344, 3872
PscI	ACATGT	1 cut(s)	1675
PshBI	ATTAAT	3 cut(s)	1197, 2085, 3525
PsiI	TTATAA	2 cut(s)	2669, 4016
Psp124BI	GAGCTC	1 cut(s)	1078
Psp1406I	AACGTT	2 cut(s)	3379, 3645
Psp6I	CCWGG	2 cut(s)	331, 2065
PspGI	CCWGG	2 cut(s)	331, 2065
PspN4I	GGNNCC	6 cut(s)	78, 1495, 1609, 1819, 1881, 3622
PspPI	GGNCC	5 cut(s)	392, 830, 2124, 3133, 3326
PstI	CTGCAG	3 cut(s)	1237, 1285, 3700
PstNI	CAGNNNCTG	3 cut(s)	995, 1927, 2759
PsuI	RGATCY	2 cut(s)	448, 2629
PvuII	CAGCTG	2 cut(s)	171, 1346
RsaI	GTAC	7 cut(s)	495, 506, 1993, 2340, 2896, 3201, 3603
RsaNI	GTAC	7 cut(s)	494, 505, 1992, 2339, 2895, 3200, 3602
RseI	CAYNNNNRTG	6 cut(s)	627, 873, 2068, 2193, 3540, 3987
SacI	GAGCTC	1 cut(s)	1078
SapI	GCTCTTC	1 cut(s)	1066
Sau96I	GGNCC	5 cut(s)	392, 830, 2124, 3133, 3326
ScaI	AGTACT	1 cut(s)	506
SchI	GAGTC	4 cut(s)	1295, 2815, 3072, 3631
ScrFI	CCNGG	2 cut(s)	333, 2067
SduI	GDGCHC	4 cut(s)	1078, 1774, 3514, 3580
SfcI	CTRYAG	4 cut(s)	615, 1233, 1281, 3696
SfuI	TTCGAA	2 cut(s)	3274, 3458
SgrAI	CRCCGGYG	1 cut(s)	4070
SinI	GGWCC	3 cut(s)	830, 2124, 3326
SmiMI	CAYNNNNRTG	6 cut(s)	627, 873, 2068, 2193, 3540, 3987
SmlI	CTYRAG	3 cut(s)	150, 500, 1145
SmoI	CTYRAG	3 cut(s)	150, 500, 1145
SnaBI	TACGTA	1 cut(s)	3344
SpeI	ACTAGT	2 cut(s)	1727, 1763
SphI	GCATGC	3 cut(s)	650, 1378, 3545
SseBI	AGGCCT	1 cut(s)	3418
SsiI	CCGC	8 cut(s)	8, 198, 278, 1202, 1802, 1894, 2536, 4057
SspI	AATATT	2 cut(s)	1984, 2083
SstI	GAGCTC	1 cut(s)	1078
StuI	AGGCCT	1 cut(s)	3418
StyD4I	CCNGG	2 cut(s)	331, 2065
StyI	CCWWGG	4 cut(s)	31, 240, 2127, 2965
TaiI	ACGT	7 cut(s)	901, 3211, 3346, 3382, 3648, 3853, 3874
TaqI	TCGA	7 cut(s)	1083, 1472, 1590, 2469, 3274, 3458, 3828
TaqII	GACCGA	1 cut(s)	1446
TatI	WGTACW	2 cut(s)	504, 1991
TauI	GCSGC	1 cut(s)	4060
TseFI	GTSAC	5 cut(s)	164, 980, 991, 2755, 2981
Tsp45I	GTSAC	5 cut(s)	164, 980, 991, 2755, 2981
TspGWI	ACGGA	4 cut(s)	1661, 1814, 3031, 3248
Van91I	CCANNNNNTGG	2 cut(s)	995, 2066
Vha464I	CTTAAG	1 cut(s)	500
VneI	GTGCAC	2 cut(s)	1770, 3510
VpaK11BI	GGWCC	3 cut(s)	830, 2124, 3326
VspI	ATTAAT	3 cut(s)	1197, 2085, 3525
XapI	RAATTY	5 cut(s)	487, 1446, 1586, 2243, 2648
XbaI	TCTAGA	1 cut(s)	316
XceI	RCATGY	6 cut(s)	650, 791, 1378, 1679, 3545, 3610
XmiI	GTMKAC	2 cut(s)	338, 2176
XmnI	GAANNNNTTC	4 cut(s)	86, 1692, 2136, 2406
ZrmI	AGTACT	1 cut(s)	506
Zsp2I	ATGCAT	2 cut(s)	1791, 3547

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.