Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0002113

Physical Location & Seq

Genomic Coordinates Reverse (-)

33555217 .. 33561891

Gene Structure 6675 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G026430.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3375 bp

ATGCCTCCTCCTCCTCCTTTTGTGAGCGGATGGATGTATGTTAATGAACAAGGACAAATGTGTGGCCCGTATATTCAGCAGCAGTTATTTGAAGGTTTATCTACTGGTTTTTTGCCAGATGAGCTTCCTGTATATCCTGTCGTAAATGGGGCATTAATAAACCCAATACCATTGAAGTATTTCAAGCAGTTCCCTGATCATGTTGCTACTGGGTTTGCATATTTGAGTCTGGGCAGCATCTCGAGCACAAGCACGCCTACAAATTCTCTTAAATCTTGCAATGGGGATTTGGCTACATGTAGTATACCTACACCGGTTGCTACCGGTTATCCTGATTTACAGTATGACTCCACTTCACAGGCCAGCTATGGCACTAGTTCAAGTAAAGATTCTTGCTGGTTGTATGAGGATGAGGAAGGGAAGAGAAATGGGCCATATTCTCTTTTCGAATTAAATTCTTGGCATCGATATGGATATCTTCGGGATTCACTGACGATTTATCATGTCATGAACAAGTGTAAACCTTTCACGCTGTCATCGGTTCTCAAGTCATGGAAACTTGATGGACCTGAAACCATCACCAAATTTGATGCCAAATGTAATGAGTCTGGCCCATTGGTAAGCATTATATCTGAAGTCACAGAGGGAGTTTCTTCCCAACTGCACTATGGAATTATGAAATCTGCTCGTAGAGTTGTTTTAGATGAGATAATCAGCAATGTGATTGCTGAGTTTGTTACCACCACGAAAGCTCAGAGACTTAACCAGGATATGAAGACCTGGTCCTTGGATGCAAAAAAGTCTGAAATTGACTGTGAGGCTGGAGTTTCCGACTATGTTGCTGAAAGGACATGTATCAATCAAGATTTGCCTTCACCAATGACTAAATCTGTTGGAAGCATTCAGAACTTTTGGGATTCTTATGCAGTTGTTTGTAGAATGCTCTTTGATTATTGCATGGAAGTCATGTGGAATGCTGTCTTCTATGATTCAGTGGCAGAATATTCATCTGCTTGGAGGAGAAGTAAACTATGGACTGGCTCTCCATTGTTGTGGAGACCTCCTAAAAGATGTGGTGACTGGGTGGAAAAGATCACAAAATTACCTCATGAAATTTTATCTGATAATGATGATGATCGTCCCCCTGGTTTTGAACTGTTGGGAGCTGAGTTAGGGCGTCATGCTCAGCCATCATTGAGCTCTTCATTGGTTCTAATGGAGGAAAAACCACCTAAACAGATAGGTCCCTCATATGAAGACATGAAGTACATTGTAGAGCATATAGAAAATGAACTTCAATTGTCTGCAAAGAGTTCCTTGACCGAGTATGTTGGATGCTTTGTTGATGAGGAAGTGAGTAAACTAGTTAATTCGTCCACAGAAGAGAATTCAATAAAGGAGAATATTGACTGTTCCCGGAGGAGCATTGGTGGCTCATCTGACCCATGTGACAATTTGAGGACTTCAAATAACACATCTGCAGAAATTATTCTGTCTGAGATATCCCTAACTCCAGAAGTAGAAAAACCCTTCCATAGTTCTTTTTCTGAAAATCATATGTCTAATTTTCTGGCAAGTGCTTTTAAGGAAGTCTGTTCTCATGTTGATGATCTTGATGGTGACCAAGAAGTAAATGAACCATCACCCCCTGGACTCATAGCCAATGTTAAAACTCTTGGACGGTCACCTATTTGCAAATTCCGACCTTCAAGGTCAGAAGAATGTATTCCTAAGATTGGAGCATATGTTGCTACAGCAATGTTGCGGAAGAAACTCCATGATGACGTTATTGGAGAATGGAAATCATCATTTATTGATCTGGCTCTTAATAAGTTTCTTGCATCATGGCGAACTTCAAGGAAGAACCATGTCCGTAATGAGGAAAAAGCATGCAACACCAATAAAGAAGAATTAAAGCATTGTCACAGTTCTATCACTGCAGAAGTATCTCCAGTGATCGATGAATATAAATATCAGCGCAAGAGGTTGCGGAAAAAGTCAGGTTCTTCTGGACTTGTAACTGTAATTGATACTGGGTTAAAGAGTGAAACAGTGGAAAAGGCAAAGAAGCTACACGTTGCTAGAAATGTGCCGAAGAATGCTACTGTGATTCCTAGAAACAGATGTCTAAGCAAACCCCAAACTGAATCATCTGTTGATGCCATATCTGTGAAAGTTAATTCTAAAAGGCTTTCATCAACTGATAAGTCAGCAGCTAAGAATGCTAGTAGTCGGAAGCCATTGAAGGGTTCTCATGAACAAAGTTGTGAGCCCATTGACGATGTTACTGATGGCATCAGCTCAGTTAGGGGATCCCAAACTGAATTATCTGTTGGTGCCATTGCCTTGCAAGCCATTGATAAGAGGTGTTCATCCACTGATACATTAGTAGCTCATAATGCTATTAGTCGGAAACGATTGAAGGTTTCTCATGCAGTTAAAGGTAGTGAACCCATGGAGTGCACTCCTAAACCTAGTAAAAGGATGGTTTCAGCTCATGTCCAGGATGGCAATGATATTGAGAATGTTGTAAATAGCCATGGTCGAGATGATCGGCTTAAAGGAGAGCCTTTAACTAAGGTGTCGAAGCTGAAAAGGGAGCGTCCAGTTGGCGGTTCACAATTGCCACATCCCAAAAAGGTCTTGAAAGTAGCCAATGATGTTCTCAAGCAAGCAGCAAATATCCCAGTTGCAGTAAGAAAGGCACGGTCCAGTAAGTCAAAGACGTCAAATCCTTGCCCTAAATCTGATGGTTGTGCCCGTGCTTCAATTAATGGCTGGGAATGGCATAGATGGTCACTAAATGCAACTACTGCTGAAAGAGCTCGTGGTAGGGGAATCAAATATGTTAATGCCCAGTACCGGACTTCTGACACTAATACATCACAGTGTCTTCTTGCTGCTGCTGAGGGTGCTGACCTTTTGAAAGCCACTCAATTAAAGGCAAGGAAAAAGCGTCTACGTTTCCAGCGGAGCAAGATACATGATTGGGGTCTTATTGCCTTGGAGCCAATCGAGGCAGAAGACTTTGTTATTGAATATGTTGGAGAATTGATTCGTCCCCAGATATCTGATATACGCGAGCGTCATTACGAGAAGATGGGAATTGGCAGCAGTTATTTGTTTAGGATTGATGATGGTTATGTGGTTGATGCTACAAAACGTGGAGGAATTGCTAGATTCATAAACCATTCTTGTGAGCCTAACTGCTACACCAAGGTTATAAGTGTTGAGGGTGAGAAAAAGATTTTCATTTATGCAAAACGACATATAGCTGCTGGTGAAGAAATTACTTACAATTATAAGTTCCCATTAGAGGAGAAAAAGATTCCATGCAATTGTGGTTCGAAAAGGTGCCGTGGATCATTGAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006325 GO:0006464 GO:0006479 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008213 GO:0009791 GO:0009909 GO:0009987 GO:0010228 GO:0010452 GO:0016043 GO:0016569 GO:0016570 GO:0016571 GO:0018022 GO:0018193 GO:0018205 GO:0019538 GO:0022414 GO:0032259 GO:0032501 GO:0032502 GO:0034968 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048580 GO:0048608 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0051239 GO:0051276 GO:0051568 GO:0061458 GO:0065007 GO:0071704 GO:0071840 GO:1901564 GO:2000026 GO:2000241

KEGG Pathways

Metabolic & Signaling

ko00310 map00310

Pfam Domains

Protein Families

SET

Protein Analysis

1124

Amino Acids

125.22

Weight (kDa)

8.58

Isoelectric Point (pI)

47.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GYF	PF02213	133 - 169	1e-05	GYF domain
SET	PF00856	997 - 1102	1.1e-27	SET domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0002113)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G42400 AT5G42400 AT5G42400 AT5G42400 AT5G42400 AT5G42400 AT5G42400 AT5G42400
fragaria_vesca	FvH4_5g26810 FvH4_5g26810 FvH4_5g26810 FvH4_5g26810 FvH4_5g26810 FvH4_5g26810 FvH4_5g26810 FvH4_5g26810 FvH4_5g26810 FvH4_5g26810 FvH4_5g26810 FvH4_5g26810 FvH4_5g26810 FvH4_5g26810 FvH4_5g26810
malus_domestica	MD02G1278400.v1.1 MD07G1046400.v1.1 MD07G1046500.v1.1
prunus_persica	Prupe.2G042400_v2.0.a1 Prupe.2G042400_v2.0.a1 Prupe.2G042400_v2.0.a1 Prupe.2G042400_v2.0.a1 Prupe.2G042400_v2.0.a1
pyrus_communis	pycom02g23860
rosa_chinensis	RchiOBHm_Chr7g0217731
rosa_laevigata	RLG00000002444
rosa_multiflora	Rmu_co8471317.1_g000001 Rmu_sc0000202.1_g000011
rosa_roxburghii	Rroxscaffold_3G00241740
rosa_rugosa	Rorug07G0170800 Rorug07G0170800
rosa_samantha	Rh7AG311300 Rh7BG303200 Rh7CG330300 Rh7DG311100
rosa_wichuraiana	Rw7G026430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	3224, 3303
AatII	GACGTC	1 cut(s)	2729
AccB1I	GGYRCC	2 cut(s)	2336, 3354
AccBSI	CCGCTC	1 cut(s)	27
AccI	GTMKAC	2 cut(s)	304, 2959
AccII	CGCG	1 cut(s)	3081
AciI	CCGC	5 cut(s)	27, 1765, 1990, 2613, 2971
AclWI	GGATC	3 cut(s)	2307, 2320, 3370
AcsI	RAATTY	6 cut(s)	262, 454, 584, 1113, 1387, 1697
AcuI	CTGAAG	1 cut(s)	654
AcyI	GRCGYC	2 cut(s)	1177, 2726
AfaI	GTAC	2 cut(s)	1268, 2861
AfiI	CCNNNNNNNGG	6 cut(s)	1736, 1879, 2246, 2612, 2862, 3316
AflIII	ACRYGT	3 cut(s)	296, 851, 2074
AgeI	ACCGGT	2 cut(s)	313, 323
AhlI	ACTAGT	2 cut(s)	374, 1363
AjnI	CCWGG	5 cut(s)	765, 779, 1144, 1648, 2502
AjuI	GAANNNNNNNTTGG	2 cut(s)	2316, 2348
Alw21I	GWGCWC	4 cut(s)	248, 1202, 2465, 2827
Alw26I	GTCTC	2 cut(s)	751, 1051
Alw44I	GTGCAC	1 cut(s)	2461
AlwI	GGATC	3 cut(s)	2307, 2320, 3370
Ama87I	CYCGRG	1 cut(s)	241
AoxI	GGCC	4 cut(s)	64, 360, 431, 610
ApaLI	GTGCAC	1 cut(s)	2461
ApeKI	GCWGC	8 cut(s)	79, 234, 2213, 2675, 2900, 2903, 3111, 3275
ApoI	RAATTY	6 cut(s)	262, 454, 584, 1113, 1387, 1697
AseI	ATTAAT	2 cut(s)	155, 2772
AsiGI	ACCGGT	2 cut(s)	313, 323
Asp700I	GAANNNNTTC	4 cut(s)	179, 1488, 1725, 3054
AspLEI	GCGC	1 cut(s)	1980
AspS9I	GGNCC	7 cut(s)	65, 431, 566, 611, 783, 1244, 2709
AsuC2I	CCSGG	1 cut(s)	1417
AsuHPI	GGTGA	8 cut(s)	571, 867, 1088, 1631, 1635, 1677, 3248, 3293
AsuII	TTCGAA	2 cut(s)	447, 3347
AvaI	CYCGRG	1 cut(s)	241
AvaII	GGWCC	4 cut(s)	566, 783, 1244, 2709
BaeGI	GKGCMC	2 cut(s)	2465, 2761
BaeI	ACNNNNGTAYC	2 cut(s)	2373, 2406
BamHI	GGATCC	1 cut(s)	2312
BanI	GGYRCC	2 cut(s)	2336, 3354
BanII	GRGCYC	3 cut(s)	1202, 2274, 2827
BauI	CACGAG	1 cut(s)	2826
BbsI	GAAGAC	5 cut(s)	782, 973, 1263, 2885, 3030
Bbv12I	GWGCWC	4 cut(s)	248, 1202, 2465, 2827
BbvCI	CCTCAGC	1 cut(s)	2907
BbvI	GCAGC	8 cut(s)	91, 246, 2225, 2687, 2887, 2890, 3123, 3262
BceAI	ACGGC	1 cut(s)	3342
BcgI	CGANNNNNNTGC	2 cut(s)	821, 855
BciT130I	CCWGG	5 cut(s)	767, 781, 1146, 1650, 2504
BclI	TGATCA	1 cut(s)	196
BcnI	CCSGG	1 cut(s)	1417
BcoDI	GTCTC	2 cut(s)	751, 1051
BcuI	ACTAGT	2 cut(s)	374, 1363
BfaI	CTAG	7 cut(s)	375, 1364, 2082, 2115, 2226, 2475, 3177
BfmI	CTRYAG	3 cut(s)	1479, 1752, 1938
BisI	GCNGC	8 cut(s)	80, 235, 2214, 2676, 2901, 2904, 3112, 3276
BlpI	GCTNAGC	1 cut(s)	1185
BlsI	GCNGC	8 cut(s)	81, 236, 2215, 2677, 2902, 2905, 3113, 3277
Bme1390I	CCNGG	6 cut(s)	767, 781, 1146, 1417, 1650, 2504
Bme18I	GGWCC	4 cut(s)	566, 783, 1244, 2709
BmeT110I	CYCGRG	1 cut(s)	241
BmgT120I	GGNCC	7 cut(s)	65, 431, 566, 611, 783, 1244, 2709
BmiI	GGNNCC	5 cut(s)	1246, 2314, 2338, 3009, 3356
BmrFI	CCNGG	6 cut(s)	767, 781, 1146, 1417, 1650, 2504
BmrI	ACTGGG	5 cut(s)	219, 1090, 2043, 2681, 2851
BmsI	GCATC	9 cut(s)	246, 472, 580, 781, 1325, 1850, 2149, 2304, 3142
BmuI	ACTGGG	5 cut(s)	219, 1090, 2043, 2681, 2851
BpiI	GAAGAC	5 cut(s)	782, 973, 1263, 2885, 3030
BpmI	CTGGAG	3 cut(s)	843, 1497, 1935
Bpu10I	CCTNAGC	1 cut(s)	2907
Bpu1102I	GCTNAGC	1 cut(s)	1185
Bpu14I	TTCGAA	2 cut(s)	447, 3347
BpuEI	CTTGAG	2 cut(s)	530, 2651
BpuMI	CCSGG	1 cut(s)	1417
Bsa29I	ATCGAT	2 cut(s)	466, 1959
BsaBI	GATNNNNATC	1 cut(s)	1134
BsaHI	GRCGYC	2 cut(s)	1177, 2726
BsaI	GGTCTC	1 cut(s)	1051
BsaJI	CCNNGG	8 cut(s)	786, 1144, 1648, 2454, 2539, 3003, 3216, 3358
BsaWI	WCCGGW	3 cut(s)	313, 323, 2862
BsaXI	ACNNNNNCTCC	8 cut(s)	1009, 1027, 1039, 1057, 1414, 1444, 1731, 1761
Bsc4I	CCNNNNNNNGG	6 cut(s)	1736, 1879, 2246, 2612, 2862, 3316
Bse118I	RCCGGY	2 cut(s)	313, 323
Bse3DI	GCAATG	5 cut(s)	286, 724, 1764, 2340, 2518
Bse8I	GATNNNNATC	1 cut(s)	1134
BseBI	CCWGG	5 cut(s)	767, 781, 1146, 1650, 2504
BseCI	ATCGAT	2 cut(s)	466, 1959
BseDI	CCNNGG	8 cut(s)	786, 1144, 1648, 2454, 2539, 3003, 3216, 3358
BseGI	GGATG	9 cut(s)	35, 39, 415, 796, 1340, 2372, 2490, 2512, 2629
BseJI	GATNNNNATC	1 cut(s)	1134
BseLI	CCNNNNNNNGG	6 cut(s)	1736, 1879, 2246, 2612, 2862, 3316
BseMI	GCAATG	5 cut(s)	286, 724, 1764, 2340, 2518
BseMII	CTCAG	7 cut(s)	720, 767, 1158, 1199, 1488, 2316, 2898
BseRI	GAGGAG	3 cut(s)	1033, 1435, 3332
BseSI	GKGCMC	2 cut(s)	2465, 2761
BseXI	GCAGC	8 cut(s)	91, 246, 2225, 2687, 2887, 2890, 3123, 3262
BseYI	CCCAGC	1 cut(s)	2778
BsgI	GTGCAG	1 cut(s)	647
Bsh1236I	CGCG	1 cut(s)	3081
BshFI	GGCC	4 cut(s)	66, 362, 433, 612
BshNI	GGYRCC	2 cut(s)	2336, 3354
BshTI	ACCGGT	2 cut(s)	313, 323
BshVI	ATCGAT	2 cut(s)	466, 1959
BsiHKAI	GWGCWC	4 cut(s)	248, 1202, 2465, 2827
BsiHKCI	CYCGRG	1 cut(s)	241
BsiSI	CCGG	4 cut(s)	314, 324, 1417, 2863
BslFI	GGGAC	3 cut(s)	1125, 1230, 3045
BslI	CCNNNNNNNGG	6 cut(s)	1736, 1879, 2246, 2612, 2862, 3316
BsmAI	GTCTC	2 cut(s)	751, 1051
BsmFI	GGGAC	3 cut(s)	1125, 1230, 3045
BsmI	GAATGC	5 cut(s)	900, 945, 979, 2104, 2227
BsnI	GGCC	4 cut(s)	66, 362, 433, 612
Bso31I	GGTCTC	1 cut(s)	1051
BsoBI	CYCGRG	1 cut(s)	241
Bsp119I	TTCGAA	2 cut(s)	447, 3347
Bsp1286I	GDGCHC	6 cut(s)	248, 1202, 2274, 2465, 2761, 2827
Bsp143I	GATC	9 cut(s)	196, 1092, 1135, 1609, 1816, 1956, 2312, 2551, 3362
Bsp1720I	GCTNAGC	1 cut(s)	1185
Bsp19I	CCATGG	2 cut(s)	2454, 2539
BspACI	CCGC	5 cut(s)	27, 1765, 1990, 2613, 2971
BspANI	GGCC	4 cut(s)	66, 362, 433, 612
BspCNI	CTCAG	7 cut(s)	721, 766, 1159, 1198, 1489, 2315, 2899
BspDI	ATCGAT	2 cut(s)	466, 1959
BspFNI	CGCG	1 cut(s)	3081
BspHI	TCATGA	3 cut(s)	507, 1108, 2254
BspLI	GGNNCC	5 cut(s)	1246, 2314, 2338, 3009, 3356
BspMAI	CTGCAG	2 cut(s)	1483, 1942
BspPI	GGATC	3 cut(s)	2307, 2320, 3370
BspQI	GCTCTTC	1 cut(s)	1207
BspT104I	TTCGAA	2 cut(s)	447, 3347
BspT107I	GGYRCC	2 cut(s)	2336, 3354
BspTNI	GGTCTC	1 cut(s)	1051
BsrBI	CCGCTC	1 cut(s)	27
BsrDI	GCAATG	5 cut(s)	286, 724, 1764, 2340, 2518
BsrFI	RCCGGY	2 cut(s)	313, 323
BssAI	RCCGGY	2 cut(s)	313, 323
BssECI	CCNNGG	8 cut(s)	786, 1144, 1648, 2454, 2539, 3003, 3216, 3358
BssMI	GATC	9 cut(s)	196, 1092, 1135, 1609, 1816, 1956, 2312, 2551, 3362
BssNAI	GTATAC	1 cut(s)	305
BssNI	GRCGYC	2 cut(s)	1177, 2726
BssSI	CACGAG	1 cut(s)	2826
BssT1I	CCWWGG	5 cut(s)	786, 2454, 2539, 3003, 3216
Bst1107I	GTATAC	1 cut(s)	305
Bst2BI	CACGAG	1 cut(s)	2826
Bst2UI	CCWGG	5 cut(s)	767, 781, 1146, 1650, 2504
Bst6I	CTCTTC	3 cut(s)	416, 1207, 1377
BstACI	GRCGYC	2 cut(s)	1177, 2726
BstAPI	GCANNNNNTGC	2 cut(s)	1748, 2813
BstBI	TTCGAA	2 cut(s)	447, 3347
BstC8I	GCNNGC	6 cut(s)	254, 364, 1891, 2352, 2673, 3083
BstDSI	CCRYGG	3 cut(s)	2454, 2539, 3358
BstEII	GGTNACC	2 cut(s)	1619, 1683
BstF5I	GGATG	9 cut(s)	35, 39, 415, 796, 1340, 2372, 2490, 2512, 2629
BstFNI	CGCG	1 cut(s)	3081
BstHHI	GCGC	1 cut(s)	1980
BstKTI	GATC	9 cut(s)	199, 1095, 1138, 1612, 1819, 1959, 2315, 2554, 3365
BstMAI	GTCTC	2 cut(s)	751, 1051
BstMBI	GATC	9 cut(s)	196, 1092, 1135, 1609, 1816, 1956, 2312, 2551, 3362
BstNI	CCWGG	5 cut(s)	767, 781, 1146, 1650, 2504
BstNSI	RCATGY	3 cut(s)	300, 855, 1893
BstPI	GGTNACC	2 cut(s)	1619, 1683
BstSCI	CCNGG	6 cut(s)	765, 779, 1144, 1415, 1648, 2502
BstSFI	CTRYAG	3 cut(s)	1479, 1752, 1938
BstSLI	GKGCMC	2 cut(s)	2465, 2761
BstUI	CGCG	1 cut(s)	3081
BstV1I	GCAGC	8 cut(s)	91, 246, 2225, 2687, 2887, 2890, 3123, 3262
BstV2I	GAAGAC	5 cut(s)	782, 973, 1263, 2885, 3030
BstX2I	RGATCY	1 cut(s)	2312
BstXI	CCANNNNNNTGG	1 cut(s)	1053
BstYI	RGATCY	1 cut(s)	2312
BstZ17I	GTATAC	1 cut(s)	305
Bsu15I	ATCGAT	2 cut(s)	466, 1959
BsuRI	GGCC	4 cut(s)	66, 362, 433, 612
BsuTUI	ATCGAT	2 cut(s)	466, 1959
BtgI	CCRYGG	3 cut(s)	2454, 2539, 3358
BtsCI	GGATG	9 cut(s)	35, 39, 415, 796, 1340, 2372, 2490, 2512, 2629
BtsI	GCAGTG	1 cut(s)	1935
BtsIMutI	CAGTG	7 cut(s)	488, 999, 1935, 1959, 2058, 2376, 2894
Cac8I	GCNNGC	6 cut(s)	254, 364, 1891, 2352, 2673, 3083
CciI	TCATGA	3 cut(s)	507, 1108, 2254
CfoI	GCGC	1 cut(s)	1980
Cfr10I	RCCGGY	2 cut(s)	313, 323
Cfr13I	GGNCC	7 cut(s)	65, 431, 566, 611, 783, 1244, 2709
ClaI	ATCGAT	2 cut(s)	466, 1959
CseI	GACGC	4 cut(s)	1166, 2591, 2945, 3074
CsiI	ACCWGGT	1 cut(s)	779
Csp6I	GTAC	2 cut(s)	1267, 2860
CspAI	ACCGGT	2 cut(s)	313, 323
CviQI	GTAC	2 cut(s)	1267, 2860
DpnI	GATC	9 cut(s)	198, 1094, 1137, 1611, 1818, 1958, 2314, 2553, 3364
DpnII	GATC	9 cut(s)	196, 1092, 1135, 1609, 1816, 1956, 2312, 2551, 3362
Eam1104I	CTCTTC	3 cut(s)	416, 1207, 1377
EarI	CTCTTC	3 cut(s)	416, 1207, 1377
Ecl136II	GAGCTC	2 cut(s)	1200, 2825
Eco130I	CCWWGG	5 cut(s)	786, 2454, 2539, 3003, 3216
Eco24I	GRGCYC	3 cut(s)	1202, 2274, 2827
Eco31I	GGTCTC	1 cut(s)	1051
Eco32I	GATATC	3 cut(s)	476, 1503, 3069
Eco47I	GGWCC	4 cut(s)	566, 783, 1244, 2709
Eco53kI	GAGCTC	2 cut(s)	1200, 2825
Eco57I	CTGAAG	1 cut(s)	654
Eco88I	CYCGRG	1 cut(s)	241
Eco91I	GGTNACC	2 cut(s)	1619, 1683
EcoICRI	GAGCTC	2 cut(s)	1200, 2825
EcoO109I	RGGNCCY	1 cut(s)	1244
EcoO65I	GGTNACC	2 cut(s)	1619, 1683
EcoRI	GAATTC	1 cut(s)	1387
EcoRII	CCWGG	5 cut(s)	765, 779, 1144, 1648, 2502
EcoRV	GATATC	3 cut(s)	476, 1503, 3069
EcoT14I	CCWWGG	5 cut(s)	786, 2454, 2539, 3003, 3216
EcoT38I	GRGCYC	3 cut(s)	1202, 2274, 2827
ErhI	CCWWGG	5 cut(s)	786, 2454, 2539, 3003, 3216
FalI	AAGNNNNNCTT	2 cut(s)	1301, 1333
FaqI	GGGAC	3 cut(s)	1125, 1230, 3045
FauNDI	CATATG	3 cut(s)	1252, 1557, 1744
FbaI	TGATCA	1 cut(s)	196
FblI	GTMKAC	2 cut(s)	304, 2959
Fnu4HI	GCNGC	8 cut(s)	80, 235, 2214, 2676, 2901, 2904, 3112, 3276
FokI	GGATG	9 cut(s)	42, 46, 422, 803, 1347, 2359, 2497, 2519, 2616
FriOI	GRGCYC	3 cut(s)	1202, 2274, 2827
Fsp4HI	GCNGC	8 cut(s)	80, 235, 2214, 2676, 2901, 2904, 3112, 3276
FspBI	CTAG	7 cut(s)	375, 1364, 2082, 2115, 2226, 2475, 3177
GlaI	GCGC	1 cut(s)	1979
GluI	GCNGC	8 cut(s)	80, 235, 2214, 2676, 2901, 2904, 3112, 3276
GsaI	CCCAGC	1 cut(s)	2782
GsuI	CTGGAG	3 cut(s)	843, 1497, 1935
HaeIII	GGCC	4 cut(s)	66, 362, 433, 612
HapII	CCGG	4 cut(s)	314, 324, 1417, 2863
HgaI	GACGC	4 cut(s)	1166, 2591, 2945, 3074
HhaI	GCGC	1 cut(s)	1980
Hin1I	GRCGYC	2 cut(s)	1177, 2726
Hin6I	GCGC	1 cut(s)	1978
HinP1I	GCGC	1 cut(s)	1978
HpaII	CCGG	4 cut(s)	314, 324, 1417, 2863
HphI	GGTGA	8 cut(s)	571, 867, 1088, 1631, 1635, 1677, 3248, 3293
Hpy166II	GTNNAC	9 cut(s)	305, 521, 1028, 1361, 1377, 2450, 2463, 2618, 2960
Hpy8I	GTNNAC	9 cut(s)	305, 521, 1028, 1361, 1377, 2450, 2463, 2618, 2960
HpyAV	CCTTC	7 cut(s)	86, 410, 882, 1540, 1716, 2239, 2416
HpyCH4IV	ACGT	5 cut(s)	1785, 2076, 2726, 2962, 3163
HpySE526I	ACGT	5 cut(s)	1785, 2076, 2726, 2962, 3163
Hsp92I	GRCGYC	2 cut(s)	1177, 2726
HspAI	GCGC	1 cut(s)	1978
Ksp22I	TGATCA	1 cut(s)	196
Kzo9I	GATC	9 cut(s)	196, 1092, 1135, 1609, 1816, 1956, 2312, 2551, 3362
LguI	GCTCTTC	1 cut(s)	1207
LmnI	GCTCC	6 cut(s)	1163, 1422, 1739, 2599, 2973, 3007
Lsp1109I	GCAGC	8 cut(s)	91, 246, 2225, 2687, 2887, 2890, 3123, 3262
LweI	GCATC	9 cut(s)	246, 472, 580, 781, 1325, 1850, 2149, 2304, 3142
MabI	ACCWGGT	1 cut(s)	779
MaeI	CTAG	7 cut(s)	375, 1364, 2082, 2115, 2226, 2475, 3177
MaeII	ACGT	5 cut(s)	1785, 2076, 2726, 2962, 3163
MalI	GATC	9 cut(s)	198, 1094, 1137, 1611, 1818, 1958, 2314, 2553, 3364
MbiI	CCGCTC	1 cut(s)	27
MboI	GATC	9 cut(s)	196, 1092, 1135, 1609, 1816, 1956, 2312, 2551, 3362
MfeI	CAATTG	3 cut(s)	1298, 2621, 3337
MflI	RGATCY	1 cut(s)	2312
MhlI	GDGCHC	6 cut(s)	248, 1202, 2274, 2465, 2761, 2827
MlyI	GAGTC	4 cut(s)	235, 341, 614, 1647
MmeI	TCCRAC	7 cut(s)	855, 874, 1312, 1726, 2213, 2390, 3025
MroXI	GAANNNNTTC	4 cut(s)	179, 1488, 1725, 3054
MslI	CAYNNNNRTG	6 cut(s)	468, 1051, 1605, 2168, 2887, 3195
MspA1I	CMGCKG	1 cut(s)	2971
MspI	CCGG	4 cut(s)	314, 324, 1417, 2863
MspR9I	CCNGG	6 cut(s)	767, 781, 1146, 1417, 1650, 2504
MunI	CAATTG	3 cut(s)	1298, 2621, 3337
Mva1269I	GAATGC	5 cut(s)	900, 945, 979, 2104, 2227
MvaI	CCWGG	5 cut(s)	767, 781, 1146, 1650, 2504
MvnI	CGCG	1 cut(s)	3081
NciI	CCSGG	1 cut(s)	1417
NcoI	CCATGG	2 cut(s)	2454, 2539
NdeI	CATATG	3 cut(s)	1252, 1557, 1744
NdeII	GATC	9 cut(s)	196, 1092, 1135, 1609, 1816, 1956, 2312, 2551, 3362
NlaIV	GGNNCC	5 cut(s)	1246, 2314, 2338, 3009, 3356
NmuCI	GTSAC	7 cut(s)	637, 1076, 1448, 1619, 1683, 1922, 2796
NspI	RCATGY	3 cut(s)	300, 855, 1893
NspV	TTCGAA	2 cut(s)	447, 3347
PaeI	GCATGC	1 cut(s)	1893
PaeR7I	CTCGAG	1 cut(s)	241
PagI	TCATGA	3 cut(s)	507, 1108, 2254
PciI	ACATGT	2 cut(s)	296, 851
PciSI	GCTCTTC	1 cut(s)	1207
PctI	GAATGC	5 cut(s)	900, 945, 979, 2104, 2227
PdmI	GAANNNNTTC	4 cut(s)	179, 1488, 1725, 3054
PflFI	GACNNNGTC	1 cut(s)	781
PfoI	TCCNGGA	2 cut(s)	1415, 2502
PinAI	ACCGGT	2 cut(s)	313, 323
PkrI	GCNGC	8 cut(s)	81, 236, 2215, 2677, 2902, 2905, 3113, 3277
PleI	GAGTC	4 cut(s)	234, 341, 613, 1647
PpsI	GAGTC	4 cut(s)	234, 341, 613, 1647
PpuMI	RGGWCCY	1 cut(s)	1244
PscI	ACATGT	2 cut(s)	296, 851
PshBI	ATTAAT	2 cut(s)	155, 2772
PsiI	TTATAA	2 cut(s)	3224, 3303
Psp124BI	GAGCTC	2 cut(s)	1202, 2827
Psp5II	RGGWCCY	1 cut(s)	1244
Psp6I	CCWGG	5 cut(s)	765, 779, 1144, 1648, 2502
PspEI	GGTNACC	2 cut(s)	1619, 1683
PspFI	CCCAGC	1 cut(s)	2778
PspGI	CCWGG	5 cut(s)	765, 779, 1144, 1648, 2502
PspN4I	GGNNCC	5 cut(s)	1246, 2314, 2338, 3009, 3356
PspPI	GGNCC	7 cut(s)	65, 431, 566, 611, 783, 1244, 2709
PspPPI	RGGWCCY	1 cut(s)	1244
PstI	CTGCAG	2 cut(s)	1483, 1942
PsuI	RGATCY	1 cut(s)	2312
PsyI	GACNNNGTC	1 cut(s)	781
RsaI	GTAC	2 cut(s)	1268, 2861
RsaNI	GTAC	2 cut(s)	1267, 2860
RseI	CAYNNNNRTG	6 cut(s)	468, 1051, 1605, 2168, 2887, 3195
SacI	GAGCTC	2 cut(s)	1202, 2827
SapI	GCTCTTC	1 cut(s)	1207
SatI	GCNGC	8 cut(s)	80, 235, 2214, 2676, 2901, 2904, 3112, 3276
Sau3AI	GATC	9 cut(s)	196, 1092, 1135, 1609, 1816, 1956, 2312, 2551, 3362
Sau96I	GGNCC	7 cut(s)	65, 431, 566, 611, 783, 1244, 2709
SchI	GAGTC	4 cut(s)	235, 341, 614, 1647
ScrFI	CCNGG	6 cut(s)	767, 781, 1146, 1417, 1650, 2504
SduI	GDGCHC	6 cut(s)	248, 1202, 2274, 2465, 2761, 2827
SexAI	ACCWGGT	1 cut(s)	779
SfaNI	GCATC	9 cut(s)	246, 472, 580, 781, 1325, 1850, 2149, 2304, 3142
SfcI	CTRYAG	3 cut(s)	1479, 1752, 1938
Sfr274I	CTCGAG	1 cut(s)	241
SfuI	TTCGAA	2 cut(s)	447, 3347
SinI	GGWCC	4 cut(s)	566, 783, 1244, 2709
SlaI	CTCGAG	1 cut(s)	241
SmiMI	CAYNNNNRTG	6 cut(s)	468, 1051, 1605, 2168, 2887, 3195
SmlI	CTYRAG	3 cut(s)	241, 545, 2666
SmoI	CTYRAG	3 cut(s)	241, 545, 2666
SpeI	ACTAGT	2 cut(s)	374, 1363
SphI	GCATGC	1 cut(s)	1893
SsiI	CCGC	5 cut(s)	27, 1765, 1990, 2613, 2971
SspI	AATATT	2 cut(s)	1004, 1405
SspMI	CTAG	7 cut(s)	375, 1364, 2082, 2115, 2226, 2475, 3177
SstI	GAGCTC	2 cut(s)	1202, 2827
StyD4I	CCNGG	6 cut(s)	765, 779, 1144, 1415, 1648, 2502
StyI	CCWWGG	5 cut(s)	786, 2454, 2539, 3003, 3216
TaiI	ACGT	5 cut(s)	1788, 2079, 2729, 2965, 3166
TaqI	TCGA	8 cut(s)	242, 447, 466, 1959, 2545, 2585, 3015, 3347
TaqII	GACCGA	1 cut(s)	1337
TatI	WGTACW	1 cut(s)	1266
TscAI	CASTG	7 cut(s)	495, 999, 1942, 1959, 2058, 2383, 2894
TseFI	GTSAC	7 cut(s)	637, 1076, 1448, 1619, 1683, 1922, 2796
TseI	GCWGC	8 cut(s)	79, 234, 2213, 2675, 2900, 2903, 3111, 3275
Tsp45I	GTSAC	7 cut(s)	637, 1076, 1448, 1619, 1683, 1922, 2796
TspGWI	ACGGA	1 cut(s)	1862
TspRI	CASTG	7 cut(s)	495, 999, 1942, 1959, 2058, 2383, 2894
Tth111I	GACNNNGTC	1 cut(s)	781
VneI	GTGCAC	1 cut(s)	2461
VpaK11BI	GGWCC	4 cut(s)	566, 783, 1244, 2709
VspI	ATTAAT	2 cut(s)	155, 2772
XapI	RAATTY	6 cut(s)	262, 454, 584, 1113, 1387, 1697
XceI	RCATGY	3 cut(s)	300, 855, 1893
XcmI	CCANNNNNNNNNTGG	1 cut(s)	665
XhoI	CTCGAG	1 cut(s)	241
XmiI	GTMKAC	2 cut(s)	304, 2959
XmnI	GAANNNNTTC	4 cut(s)	179, 1488, 1725, 3054
XspI	CTAG	7 cut(s)	375, 1364, 2082, 2115, 2226, 2475, 3177
ZraI	GACGTC	1 cut(s)	2727

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.