Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0011199

Physical Location & Seq

Genomic Coordinates Forward (+)

17453517 .. 17455297

Gene Structure 1781 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G43430.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 756 bp

ATGAAGATTCTCGTCGCCGTTAAACGTGTCGTCGACTACGCCGTCAAGATCCGAGTCAAACCCGATAAGACTGGTGTAGAAACCCAAAATGTGAAGATGTCAATGAATCCATTTTGTGAGATCGCGCTTGAGGAAGCGCTTCGAATCAAAGAAGCTGGTTTTGCTAAAGAGGTTATTGCAGTGAGTATTGGACCTTCACAATGTGTGGATACACTTCGTACTGGTTTAGCTATGGGTGCTGATCGAGGAATCCATGTTGAGACCAATTCTATTTTTCTTCCTTTGACGATTGCTAAGATCTTGAAGAGTTTAGCTGATGTTGAGAATCCTGGATTGATTTTCTTAGGGAAACAGGCGATAGATGATGATTGCAATCAAACAGGACAGATGGTTGCAGCTTTACTTGGTTGGCCACAAGCAACGTTTGCATCGAAGGTTGTGTTGGATAAAGATAAGAATGTTGCAACCGTGGATAGAGAAGTGGATGGAGGTCTTGAGACTCTTAATGTAGACTTACCCGCTGTGATAACAACTGATTTGAGGCTGAACCAACCAAGATATGCATCACTCCCTAACATAATGAAGGCAAAATCAAAGCCTATAAAGAAAATGACGGTGCAAGATCTGAAAGTAGACATTAAATCCGACATAGAGATCTTGGAAGTCACGGAGCCTCCAAAGAGGAAATCTGGGGTTATGGTTTCTTCGGTGGATGAGTTGATAGATAAACTTAAAAATGAAGCTCATGTTGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005829 GO:0006082 GO:0006091 GO:0006520 GO:0006551 GO:0006552 GO:0006725 GO:0006778 GO:0006787 GO:0006807 GO:0008150 GO:0008152 GO:0009055 GO:0009056 GO:0009063 GO:0009081 GO:0009083 GO:0009987 GO:0015994 GO:0015996 GO:0016054 GO:0016491 GO:0019439 GO:0019752 GO:0022900 GO:0033013 GO:0033015 GO:0034641 GO:0042440 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044248 GO:0044270 GO:0044281 GO:0044282 GO:0044424 GO:0044444 GO:0044464 GO:0046149 GO:0046395 GO:0046483 GO:0046700 GO:0051186 GO:0051187 GO:0055114 GO:0071704 GO:1901360 GO:1901361 GO:1901564 GO:1901565 GO:1901575 GO:1901605 GO:1901606

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ETF

Protein Analysis

251

Amino Acids

27.4

Weight (kDa)

6.76

Isoelectric Point (pI)

24.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ETF	PF01012	2 - 176	1.2e-40	Electron transfer flavoprotein domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011199)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G43430 AT5G43430 AT5G43430 AT5G43430
fragaria_vesca	FvH4_4g03430 FvH4_4g03430
malus_domestica	MD13G1212500.v1.1
prunus_persica	Prupe.1G037500_v2.0.a1
pyrus_communis	pycom13g18430
rosa_chinensis	RchiOBHm_Chr4g0392411
rosa_laevigata	RLG00000009813
rosa_multiflora	Rmu_sc0001800.1_g000016
rosa_roxburghii	Rroxscaffold_5G00337590
rosa_rugosa	Rorug03G0338700 Rorug03G0338800
rosa_samantha	Rh4AG042500 Rh4BG037400 Rh4CG045300 Rh4DG039800
rosa_wichuraiana	Rw4G003320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	41
AccI	GTMKAC	3 cut(s)	33, 510, 633
AccII	CGCG	1 cut(s)	125
AciI	CCGC	1 cut(s)	519
AclI	AACGTT	1 cut(s)	422
AclWI	GGATC	1 cut(s)	43
AcoI	YGGCCR	1 cut(s)	410
AdeI	CACNNNGTG	1 cut(s)	203
AfaI	GTAC	1 cut(s)	220
AfeI	AGCGCT	1 cut(s)	138
AflIII	ACRYGT	1 cut(s)	25
AgsI	TTSAA	1 cut(s)	304
AjnI	CCWGG	1 cut(s)	328
AjuI	GAANNNNNNNTTGG	2 cut(s)	425, 457
AluBI	AGCT	5 cut(s)	155, 230, 314, 398, 743
AluI	AGCT	5 cut(s)	155, 230, 314, 398, 743
Alw26I	GTCTC	2 cut(s)	254, 491
AlwI	GGATC	1 cut(s)	43
Aor51HI	AGCGCT	1 cut(s)	138
AoxI	GGCC	1 cut(s)	410
ApeKI	GCWGC	1 cut(s)	395
Asp700I	GAANNNNTTC	1 cut(s)	138
AspLEI	GCGC	2 cut(s)	127, 139
AspS9I	GGNCC	1 cut(s)	191
AsuII	TTCGAA	1 cut(s)	142
AvaII	GGWCC	1 cut(s)	191
BalI	TGGCCA	1 cut(s)	412
BarI	GAAGNNNNNNTAC	2 cut(s)	178, 210
BbvI	GCAGC	1 cut(s)	407
BccI	CCATC	2 cut(s)	382, 479
BceAI	ACGGC	2 cut(s)	2, 26
BciT130I	CCWGG	1 cut(s)	330
BciVI	GTATCC	1 cut(s)	202
BcoDI	GTCTC	2 cut(s)	254, 491
BfoI	RGCGCY	1 cut(s)	140
BfuI	GTATCC	1 cut(s)	202
BglII	AGATCT	3 cut(s)	297, 622, 654
BisI	GCNGC	1 cut(s)	396
BlsI	GCNGC	1 cut(s)	397
Bme1390I	CCNGG	1 cut(s)	330
Bme18I	GGWCC	1 cut(s)	191
BmgT120I	GGNCC	1 cut(s)	191
BmiI	GGNNCC	1 cut(s)	672
BmrFI	CCNGG	1 cut(s)	330
BmsI	GCATC	2 cut(s)	437, 572
Bpu14I	TTCGAA	1 cut(s)	142
BpuEI	CTTGAG	2 cut(s)	149, 515
BsaBI	GATNNNNATC	2 cut(s)	372, 562
BsaI	GGTCTC	1 cut(s)	254
BsaJI	CCNNGG	1 cut(s)	468
BsaXI	ACNNNNNCTCC	2 cut(s)	658, 688
Bse1I	ACTGG	2 cut(s)	76, 226
Bse8I	GATNNNNATC	2 cut(s)	372, 562
BseBI	CCWGG	1 cut(s)	330
BseDI	CCNNGG	1 cut(s)	468
BseGI	GGATG	2 cut(s)	490, 718
BseJI	GATNNNNATC	2 cut(s)	372, 562
BseNI	ACTGG	2 cut(s)	76, 226
BseXI	GCAGC	1 cut(s)	407
Bsh1236I	CGCG	1 cut(s)	125
BshFI	GGCC	1 cut(s)	412
BsmAI	GTCTC	2 cut(s)	254, 491
BsnI	GGCC	1 cut(s)	412
Bso31I	GGTCTC	1 cut(s)	254
Bsp119I	TTCGAA	1 cut(s)	142
Bsp143I	GATC	6 cut(s)	48, 120, 241, 297, 622, 654
BspACI	CCGC	1 cut(s)	519
BspANI	GGCC	1 cut(s)	412
BspFNI	CGCG	1 cut(s)	125
BspLI	GGNNCC	1 cut(s)	672
BspPI	GGATC	1 cut(s)	43
BspT104I	TTCGAA	1 cut(s)	142
BspTNI	GGTCTC	1 cut(s)	254
BsrI	ACTGG	2 cut(s)	76, 226
BssECI	CCNNGG	1 cut(s)	468
BssMI	GATC	6 cut(s)	48, 120, 241, 297, 622, 654
Bst2UI	CCWGG	1 cut(s)	330
Bst4CI	ACNGT	2 cut(s)	469, 616
Bst6I	CTCTTC	1 cut(s)	299
BstAPI	GCANNNNNTGC	1 cut(s)	425
BstBI	TTCGAA	1 cut(s)	142
BstDEI	CTNAG	2 cut(s)	294, 343
BstDSI	CCRYGG	1 cut(s)	468
BstF5I	GGATG	2 cut(s)	490, 718
BstFNI	CGCG	1 cut(s)	125
BstH2I	RGCGCY	1 cut(s)	140
BstHHI	GCGC	2 cut(s)	127, 139
BstKTI	GATC	6 cut(s)	51, 123, 244, 300, 625, 657
BstMAI	GTCTC	2 cut(s)	254, 491
BstMBI	GATC	6 cut(s)	48, 120, 241, 297, 622, 654
BstMWI	GCNNNNNNNGC	3 cut(s)	161, 236, 425
BstNI	CCWGG	1 cut(s)	330
BstSCI	CCNGG	1 cut(s)	328
BstUI	CGCG	1 cut(s)	125
BstV1I	GCAGC	1 cut(s)	407
BstX2I	RGATCY	4 cut(s)	48, 297, 622, 654
BstYI	RGATCY	4 cut(s)	48, 297, 622, 654
BsuI	GTATCC	1 cut(s)	202
BsuRI	GGCC	1 cut(s)	412
BtgI	CCRYGG	1 cut(s)	468
BtsCI	GGATG	2 cut(s)	490, 718
BtsI	GCAGTG	1 cut(s)	186
BtsIMutI	CAGTG	1 cut(s)	186
CfoI	GCGC	2 cut(s)	127, 139
Cfr13I	GGNCC	1 cut(s)	191
Csp6I	GTAC	1 cut(s)	219
CviAII	CATG	2 cut(s)	254, 746
CviJI	RGCY	9 cut(s)	155, 230, 314, 398, 412, 544, 598, 673, 743
CviKI_1	RGCY	9 cut(s)	155, 230, 314, 398, 412, 544, 598, 673, 743
CviQI	GTAC	1 cut(s)	219
DdeI	CTNAG	2 cut(s)	294, 343
DpnI	GATC	6 cut(s)	50, 122, 243, 299, 624, 656
DpnII	GATC	6 cut(s)	48, 120, 241, 297, 622, 654
DraIII	CACNNNGTG	1 cut(s)	203
DrdI	GACNNNNNNGTC	1 cut(s)	41
DseDI	GACNNNNNNGTC	1 cut(s)	41
EaeI	YGGCCR	1 cut(s)	410
Eam1104I	CTCTTC	1 cut(s)	299
EarI	CTCTTC	1 cut(s)	299
Eco31I	GGTCTC	1 cut(s)	254
Eco47I	GGWCC	1 cut(s)	191
Eco47III	AGCGCT	1 cut(s)	138
EcoRII	CCWGG	1 cut(s)	328
EcoT22I	ATGCAT	1 cut(s)	565
FaeI	CATG	2 cut(s)	257, 749
FaiI	YATR	8 cut(s)	233, 255, 561, 578, 602, 650, 698, 747
FatI	CATG	2 cut(s)	253, 745
FauI	CCCGC	1 cut(s)	526
FblI	GTMKAC	3 cut(s)	33, 510, 633
Fnu4HI	GCNGC	1 cut(s)	396
FokI	GGATG	2 cut(s)	497, 725
Fsp4HI	GCNGC	1 cut(s)	396
GlaI	GCGC	2 cut(s)	126, 138
GluI	GCNGC	1 cut(s)	396
HaeII	RGCGCY	1 cut(s)	140
HaeIII	GGCC	1 cut(s)	412
HhaI	GCGC	2 cut(s)	127, 139
Hin1II	CATG	2 cut(s)	257, 749
Hin6I	GCGC	2 cut(s)	125, 137
HinP1I	GCGC	2 cut(s)	125, 137
HincII	GTYRAC	1 cut(s)	34
HindII	GTYRAC	1 cut(s)	34
HinfI	GANTC	7 cut(s)	7, 54, 106, 144, 249, 325, 499
Hpy166II	GTNNAC	3 cut(s)	34, 511, 634
Hpy188I	TCNGA	3 cut(s)	53, 627, 646
Hpy188III	TCNNGA	3 cut(s)	46, 301, 494
Hpy8I	GTNNAC	3 cut(s)	34, 511, 634
Hpy99I	CGWCG	2 cut(s)	17, 35
HpyAV	CCTTC	3 cut(s)	204, 427, 577
HpyCH4III	ACNGT	2 cut(s)	469, 616
HpyCH4IV	ACGT	2 cut(s)	25, 422
HpyCH4V	TGCA	7 cut(s)	179, 372, 395, 428, 464, 563, 619
HpyF10VI	GCNNNNNNNGC	3 cut(s)	161, 236, 425
HpyF3I	CTNAG	2 cut(s)	294, 343
HpySE526I	ACGT	2 cut(s)	25, 422
Hsp92II	CATG	2 cut(s)	257, 749
HspAI	GCGC	2 cut(s)	125, 137
Kzo9I	GATC	6 cut(s)	48, 120, 241, 297, 622, 654
LmnI	GCTCC	1 cut(s)	670
LpnPI	CCDG	8 cut(s)	57, 141, 207, 315, 338, 342, 366, 675
Lsp1109I	GCAGC	1 cut(s)	407
LweI	GCATC	2 cut(s)	437, 572
MaeII	ACGT	2 cut(s)	25, 422
MaeIII	GTNAC	1 cut(s)	664
MalI	GATC	6 cut(s)	50, 122, 243, 299, 624, 656
MboI	GATC	6 cut(s)	48, 120, 241, 297, 622, 654
MboII	GAAGA	5 cut(s)	16, 106, 269, 316, 696
MflI	RGATCY	4 cut(s)	48, 297, 622, 654
MlsI	TGGCCA	1 cut(s)	412
MluCI	AATT	1 cut(s)	265
MluNI	TGGCCA	1 cut(s)	412
MlyI	GAGTC	2 cut(s)	63, 493
MmeI	TCCRAC	2 cut(s)	423, 669
MnlI	CCTC	7 cut(s)	124, 163, 239, 482, 534, 675, 684
Mox20I	TGGCCA	1 cut(s)	412
Mph1103I	ATGCAT	1 cut(s)	565
MroXI	GAANNNNTTC	1 cut(s)	138
MscI	TGGCCA	1 cut(s)	412
MseI	TTAA	4 cut(s)	21, 504, 639, 732
Msp20I	TGGCCA	1 cut(s)	412
MspA1I	CMGCKG	1 cut(s)	521
MspR9I	CCNGG	1 cut(s)	330
MvaI	CCWGG	1 cut(s)	330
MvnI	CGCG	1 cut(s)	125
MwoI	GCNNNNNNNGC	3 cut(s)	161, 236, 425
NdeII	GATC	6 cut(s)	48, 120, 241, 297, 622, 654
NlaIII	CATG	2 cut(s)	257, 749
NlaIV	GGNNCC	1 cut(s)	672
NmuCI	GTSAC	1 cut(s)	664
NsiI	ATGCAT	1 cut(s)	565
NspV	TTCGAA	1 cut(s)	142
PcsI	WCGNNNNNNNCGW	2 cut(s)	39, 428
PdmI	GAANNNNTTC	1 cut(s)	138
PfeI	GAWTC	5 cut(s)	7, 106, 144, 249, 325
PfoI	TCCNGGA	1 cut(s)	328
PkrI	GCNGC	1 cut(s)	397
PleI	GAGTC	2 cut(s)	62, 493
PpsI	GAGTC	2 cut(s)	62, 493
Psp1406I	AACGTT	1 cut(s)	422
Psp6I	CCWGG	1 cut(s)	328
PspGI	CCWGG	1 cut(s)	328
PspN4I	GGNNCC	1 cut(s)	672
PspPI	GGNCC	1 cut(s)	191
PsuI	RGATCY	4 cut(s)	48, 297, 622, 654
RsaI	GTAC	1 cut(s)	220
RsaNI	GTAC	1 cut(s)	219
SalI	GTCGAC	1 cut(s)	32
SaqAI	TTAA	4 cut(s)	21, 504, 639, 732
SatI	GCNGC	1 cut(s)	396
Sau3AI	GATC	6 cut(s)	48, 120, 241, 297, 622, 654
Sau96I	GGNCC	1 cut(s)	191
SchI	GAGTC	2 cut(s)	63, 493
ScrFI	CCNGG	1 cut(s)	330
SfaNI	GCATC	2 cut(s)	437, 572
SfuI	TTCGAA	1 cut(s)	142
SinI	GGWCC	1 cut(s)	191
SmlI	CTYRAG	2 cut(s)	128, 494
SmoI	CTYRAG	2 cut(s)	128, 494
Sse9I	AATT	1 cut(s)	265
SsiI	CCGC	1 cut(s)	519
StyD4I	CCNGG	1 cut(s)	328
TaaI	ACNGT	2 cut(s)	469, 616
TaiI	ACGT	2 cut(s)	28, 425
TaqI	TCGA	4 cut(s)	33, 142, 244, 431
TasI	AATT	1 cut(s)	265
TfiI	GAWTC	5 cut(s)	7, 106, 144, 249, 325
Tru1I	TTAA	4 cut(s)	21, 504, 639, 732
Tru9I	TTAA	4 cut(s)	21, 504, 639, 732
TscAI	CASTG	1 cut(s)	186
TseFI	GTSAC	1 cut(s)	664
TseI	GCWGC	1 cut(s)	395
Tsp45I	GTSAC	1 cut(s)	664
TspDTI	ATGAA	4 cut(s)	17, 119, 596, 753
TspGWI	ACGGA	1 cut(s)	683
TspRI	CASTG	1 cut(s)	186
VpaK11BI	GGWCC	1 cut(s)	191
XmiI	GTMKAC	3 cut(s)	33, 510, 633
XmnI	GAANNNNTTC	1 cut(s)	138
Zsp2I	ATGCAT	1 cut(s)	565

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.