Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0011199

Physical Location & Seq

Genomic Coordinates Reverse (-)

2599648 .. 2604398

Gene Structure 4751 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G037500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 756 bp

ATGAAGATAATGGTGGCGATAAAGCGGGTCGTCGACTACGCCGTCAAAATCCGAGTCAAATCCGATAAGAGCGGCGTGGAGACCCAGAACGTGAAGATGTCAATGAACCCATTCTGCGAGATTGCTTTGGAGGAGGCCCTTCGGATCAAAGAGGCGGGCATGGCCTCGGAGGTCGTGGCCGTCACCATGGGTCTAAAGCAGTGCGTCGATACGCTCAGGACAGGCCTTGCTATGGGAGCTGATAGGGGCATTCATGTGGAGACTAGTGGTCCTCTGTACCCTTTGTCTGTTGCTAAGCTTTTGAGAGCCCTCGTGGAGGTTGAGAAGCCTGGCCTTCTCATTCTTGGCAAGCAGGCTATTGACGATGATTGCAATCAAACGGGGCAAATGGTGGCAGGGCTGCTGAACTGGCCTCAAGGGACCTTTGCTTCAAAGGTTGTGCTGGATAAGGAGAAGCAAATAGTGACAGTGGACAGAGAGGTAGATGGTGGTCTTGAGACTTTGTGTCTAGATATGCCAGCAGTGATCACCACTGATTTGAGGCTGAACCAACCAAGGTATGCAACTCTCCCCAACATAATGAAAGCGAAATCAAAGGCCATAAAGAAATTTACTCCAGAGGATCTGAATGTGGAAATCAAATCCGATATAGAGGAGGTTCAAGTCACCGAACCTCCCAAAAGAAAAGCAGGGGTCATCCTTTCTTCTGTGGACGAGTTGATTGACAAGCTTAAGAACGAAGCCCATGTGATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005829 GO:0006082 GO:0006091 GO:0006520 GO:0006551 GO:0006552 GO:0006725 GO:0006778 GO:0006787 GO:0006807 GO:0008150 GO:0008152 GO:0009055 GO:0009056 GO:0009063 GO:0009081 GO:0009083 GO:0009987 GO:0015994 GO:0015996 GO:0016054 GO:0016491 GO:0019439 GO:0019752 GO:0022900 GO:0033013 GO:0033015 GO:0034641 GO:0042440 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044248 GO:0044270 GO:0044281 GO:0044282 GO:0044424 GO:0044444 GO:0044464 GO:0046149 GO:0046395 GO:0046483 GO:0046700 GO:0051186 GO:0051187 GO:0055114 GO:0071704 GO:1901360 GO:1901361 GO:1901564 GO:1901565 GO:1901575 GO:1901605 GO:1901606

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ETF

Protein Analysis

252

Amino Acids

27.49

Weight (kDa)

6.22

Isoelectric Point (pI)

29.76

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011199)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G43430 AT5G43430 AT5G43430 AT5G43430
fragaria_vesca	FvH4_4g03430 FvH4_4g03430
malus_domestica	MD13G1212500.v1.1
prunus_persica	Prupe.1G037500_v2.0.a1
pyrus_communis	pycom13g18430
rosa_chinensis	RchiOBHm_Chr4g0392411
rosa_laevigata	RLG00000009813
rosa_multiflora	Rmu_sc0001800.1_g000016
rosa_roxburghii	Rroxscaffold_5G00337590
rosa_rugosa	Rorug03G0338700 Rorug03G0338800
rosa_samantha	Rh4AG042500 Rh4BG037400 Rh4CG045300 Rh4DG039800
rosa_wichuraiana	Rw4G003320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	41
AccBSI	CCGCTC	1 cut(s)	72
AccI	GTMKAC	1 cut(s)	33
AciI	CCGC	3 cut(s)	25, 72, 155
AclWI	GGATC	2 cut(s)	152, 630
AcoI	YGGCCR	1 cut(s)	177
AcsI	RAATTY	1 cut(s)	608
AfaI	GTAC	1 cut(s)	278
AfiI	CCNNNNNNNGG	2 cut(s)	232, 316
AflII	CTTAAG	1 cut(s)	731
AgsI	TTSAA	2 cut(s)	432, 662
AhdI	GACNNNNNGTC	2 cut(s)	267, 504
AhlI	ACTAGT	1 cut(s)	263
AjnI	CCWGG	1 cut(s)	328
AluBI	AGCT	3 cut(s)	239, 298, 730
AluI	AGCT	3 cut(s)	239, 298, 730
Alw26I	GTCTC	3 cut(s)	74, 254, 491
AlwI	GGATC	2 cut(s)	152, 630
AoxI	GGCC	7 cut(s)	135, 162, 177, 223, 331, 410, 597
ApeKI	GCWGC	1 cut(s)	400
ApoI	RAATTY	1 cut(s)	608
ArsI	GACNNNNNNTTYG	2 cut(s)	39, 71
Asp700I	GAANNNNTTC	1 cut(s)	110
AspS9I	GGNCC	3 cut(s)	136, 269, 420
AsuHPI	GGTGA	3 cut(s)	175, 520, 658
AvaII	GGWCC	2 cut(s)	269, 420
BanII	GRGCYC	1 cut(s)	310
BauI	CACGAG	1 cut(s)	311
BbvI	GCAGC	1 cut(s)	387
BccI	CCATC	1 cut(s)	479
BceAI	ACGGC	2 cut(s)	26, 164
BciT130I	CCWGG	1 cut(s)	330
BclI	TGATCA	1 cut(s)	525
BcoDI	GTCTC	3 cut(s)	74, 254, 491
BcuI	ACTAGT	1 cut(s)	263
BfaI	CTAG	2 cut(s)	264, 509
BfrI	CTTAAG	1 cut(s)	731
BisI	GCNGC	2 cut(s)	73, 401
BlpI	GCTNAGC	1 cut(s)	294
BlsI	GCNGC	2 cut(s)	74, 402
Bme1390I	CCNGG	1 cut(s)	330
Bme18I	GGWCC	2 cut(s)	269, 420
BmeRI	GACNNNNNGTC	2 cut(s)	267, 504
BmgT120I	GGNCC	3 cut(s)	136, 269, 420
BmiI	GGNNCC	1 cut(s)	421
BmrFI	CCNGG	1 cut(s)	330
BpmI	CTGGAG	1 cut(s)	600
Bpu10I	CCTNAGC	1 cut(s)	215
Bpu1102I	GCTNAGC	1 cut(s)	294
BpuEI	CTTGAG	2 cut(s)	399, 515
BsaBI	GATNNNNATC	1 cut(s)	372
BsaI	GGTCTC	1 cut(s)	74
BsaJI	CCNNGG	3 cut(s)	165, 186, 554
BsaXI	ACNNNNNCTCC	2 cut(s)	658, 688
Bsc4I	CCNNNNNNNGG	2 cut(s)	232, 316
Bse1I	ACTGG	1 cut(s)	413
Bse8I	GATNNNNATC	1 cut(s)	372
BseBI	CCWGG	1 cut(s)	330
BseDI	CCNNGG	3 cut(s)	165, 186, 554
BseGI	GGATG	1 cut(s)	696
BseJI	GATNNNNATC	1 cut(s)	372
BseLI	CCNNNNNNNGG	2 cut(s)	232, 316
BseMII	CTCAG	1 cut(s)	229
BseNI	ACTGG	1 cut(s)	413
BseRI	GAGGAG	2 cut(s)	146, 668
BseXI	GCAGC	1 cut(s)	387
BshFI	GGCC	7 cut(s)	137, 164, 179, 225, 333, 412, 599
BslFI	GGGAC	1 cut(s)	433
BslI	CCNNNNNNNGG	2 cut(s)	232, 316
BsmAI	GTCTC	3 cut(s)	74, 254, 491
BsmFI	GGGAC	1 cut(s)	433
BsmI	GAATGC	1 cut(s)	249
BsnI	GGCC	7 cut(s)	137, 164, 179, 225, 333, 412, 599
Bso31I	GGTCTC	1 cut(s)	74
Bsp1286I	GDGCHC	1 cut(s)	310
Bsp143I	GATC	3 cut(s)	144, 525, 622
Bsp1720I	GCTNAGC	1 cut(s)	294
Bsp19I	CCATGG	1 cut(s)	186
BspACI	CCGC	3 cut(s)	25, 72, 155
BspANI	GGCC	7 cut(s)	137, 164, 179, 225, 333, 412, 599
BspCNI	CTCAG	1 cut(s)	228
BspLI	GGNNCC	1 cut(s)	421
BspPI	GGATC	2 cut(s)	152, 630
BspTI	CTTAAG	1 cut(s)	731
BspTNI	GGTCTC	1 cut(s)	74
BsrBI	CCGCTC	1 cut(s)	72
BsrI	ACTGG	1 cut(s)	413
BssECI	CCNNGG	3 cut(s)	165, 186, 554
BssMI	GATC	3 cut(s)	144, 525, 622
BssSI	CACGAG	1 cut(s)	311
BssT1I	CCWWGG	2 cut(s)	186, 554
Bst2BI	CACGAG	1 cut(s)	311
Bst2UI	CCWGG	1 cut(s)	330
Bst4CI	ACNGT	1 cut(s)	469
BstAFI	CTTAAG	1 cut(s)	731
BstC8I	GCNNGC	4 cut(s)	157, 350, 354, 519
BstDEI	CTNAG	2 cut(s)	215, 294
BstDSI	CCRYGG	1 cut(s)	186
BstENI	CCTNNNNNAGG	1 cut(s)	314
BstF5I	GGATG	1 cut(s)	696
BstKTI	GATC	3 cut(s)	147, 528, 625
BstMAI	GTCTC	3 cut(s)	74, 254, 491
BstMBI	GATC	3 cut(s)	144, 525, 622
BstMWI	GCNNNNNNNGC	3 cut(s)	161, 236, 409
BstNI	CCWGG	1 cut(s)	330
BstSCI	CCNGG	1 cut(s)	328
BstV1I	GCAGC	1 cut(s)	387
BstX2I	RGATCY	1 cut(s)	622
BstYI	RGATCY	1 cut(s)	622
BsuRI	GGCC	7 cut(s)	137, 164, 179, 225, 333, 412, 599
BtgI	CCRYGG	1 cut(s)	186
BtsCI	GGATG	1 cut(s)	696
BtsI	GCAGTG	2 cut(s)	206, 528
BtsIMutI	CAGTG	4 cut(s)	206, 474, 528, 531
Cac8I	GCNNGC	4 cut(s)	157, 350, 354, 519
Cfr13I	GGNCC	3 cut(s)	136, 269, 420
CseI	GACGC	1 cut(s)	193
Csp6I	GTAC	1 cut(s)	277
CviAII	CATG	4 cut(s)	160, 187, 254, 746
CviQI	GTAC	1 cut(s)	277
DdeI	CTNAG	2 cut(s)	215, 294
DpnI	GATC	3 cut(s)	146, 527, 624
DpnII	GATC	3 cut(s)	144, 525, 622
DrdI	GACNNNNNNGTC	1 cut(s)	41
DriI	GACNNNNNGTC	2 cut(s)	267, 504
DseDI	GACNNNNNNGTC	1 cut(s)	41
EaeI	YGGCCR	1 cut(s)	177
Eam1105I	GACNNNNNGTC	2 cut(s)	267, 504
Eco130I	CCWWGG	2 cut(s)	186, 554
Eco147I	AGGCCT	1 cut(s)	225
Eco24I	GRGCYC	1 cut(s)	310
Eco31I	GGTCTC	1 cut(s)	74
Eco47I	GGWCC	2 cut(s)	269, 420
EcoNI	CCTNNNNNAGG	1 cut(s)	314
EcoO109I	RGGNCCY	2 cut(s)	136, 420
EcoRII	CCWGG	1 cut(s)	328
EcoT14I	CCWWGG	2 cut(s)	186, 554
EcoT38I	GRGCYC	1 cut(s)	310
ErhI	CCWWGG	2 cut(s)	186, 554
FaeI	CATG	4 cut(s)	163, 190, 257, 749
FaqI	GGGAC	1 cut(s)	433
FatI	CATG	4 cut(s)	159, 186, 253, 745
FauI	CCCGC	2 cut(s)	18, 148
FbaI	TGATCA	1 cut(s)	525
FblI	GTMKAC	1 cut(s)	33
Fnu4HI	GCNGC	2 cut(s)	73, 401
FokI	GGATG	1 cut(s)	683
FriOI	GRGCYC	1 cut(s)	310
Fsp4HI	GCNGC	2 cut(s)	73, 401
FspBI	CTAG	2 cut(s)	264, 509
GluI	GCNGC	2 cut(s)	73, 401
GsuI	CTGGAG	1 cut(s)	600
HaeIII	GGCC	7 cut(s)	137, 164, 179, 225, 333, 412, 599
HgaI	GACGC	1 cut(s)	193
Hin1II	CATG	4 cut(s)	163, 190, 257, 749
HincII	GTYRAC	1 cut(s)	34
HindII	GTYRAC	1 cut(s)	34
HindIII	AAGCTT	2 cut(s)	296, 728
HinfI	GANTC	1 cut(s)	54
HphI	GGTGA	3 cut(s)	175, 520, 658
Hpy166II	GTNNAC	3 cut(s)	34, 472, 712
Hpy188I	TCNGA	6 cut(s)	53, 64, 144, 169, 627, 646
Hpy188III	TCNNGA	4 cut(s)	217, 494, 509, 617
Hpy8I	GTNNAC	3 cut(s)	34, 472, 712
Hpy99I	CGWCG	2 cut(s)	35, 209
HpyAV	CCTTC	2 cut(s)	149, 344
HpyCH4III	ACNGT	1 cut(s)	469
HpyCH4IV	ACGT	1 cut(s)	90
HpyCH4V	TGCA	2 cut(s)	372, 563
HpyF10VI	GCNNNNNNNGC	3 cut(s)	161, 236, 409
HpyF3I	CTNAG	2 cut(s)	215, 294
HpySE526I	ACGT	1 cut(s)	90
Hsp92II	CATG	4 cut(s)	163, 190, 257, 749
Ksp22I	TGATCA	1 cut(s)	525
Kzo9I	GATC	3 cut(s)	144, 525, 622
LmnI	GCTCC	1 cut(s)	236
Lsp1109I	GCAGC	1 cut(s)	387
MaeI	CTAG	2 cut(s)	264, 509
MaeII	ACGT	1 cut(s)	90
MaeIII	GTNAC	3 cut(s)	181, 463, 664
MalI	GATC	3 cut(s)	146, 527, 624
MbiI	CCGCTC	1 cut(s)	72
MboI	GATC	3 cut(s)	144, 525, 622
MboII	GAAGA	3 cut(s)	16, 106, 696
MflI	RGATCY	1 cut(s)	622
MhlI	GDGCHC	1 cut(s)	310
MluCI	AATT	1 cut(s)	608
MlyI	GAGTC	1 cut(s)	63
MroXI	GAANNNNTTC	1 cut(s)	110
MseI	TTAA	2 cut(s)	732, 754
MslI	CAYNNNNRTG	1 cut(s)	254
MspCI	CTTAAG	1 cut(s)	731
MspR9I	CCNGG	1 cut(s)	330
Mva1269I	GAATGC	1 cut(s)	249
MvaI	CCWGG	1 cut(s)	330
MwoI	GCNNNNNNNGC	3 cut(s)	161, 236, 409
NcoI	CCATGG	1 cut(s)	186
NdeII	GATC	3 cut(s)	144, 525, 622
NlaIII	CATG	4 cut(s)	163, 190, 257, 749
NlaIV	GGNNCC	1 cut(s)	421
NmuCI	GTSAC	3 cut(s)	181, 463, 664
PceI	AGGCCT	1 cut(s)	225
PcsI	WCGNNNNNNNCGW	1 cut(s)	39
PctI	GAATGC	1 cut(s)	249
PdmI	GAANNNNTTC	1 cut(s)	110
PkrI	GCNGC	2 cut(s)	74, 402
PleI	GAGTC	1 cut(s)	62
PpsI	GAGTC	1 cut(s)	62
PpuMI	RGGWCCY	1 cut(s)	420
Psp5II	RGGWCCY	1 cut(s)	420
Psp6I	CCWGG	1 cut(s)	328
PspGI	CCWGG	1 cut(s)	328
PspN4I	GGNNCC	1 cut(s)	421
PspPI	GGNCC	3 cut(s)	136, 269, 420
PspPPI	RGGWCCY	1 cut(s)	420
PsuI	RGATCY	1 cut(s)	622
RsaI	GTAC	1 cut(s)	278
RsaNI	GTAC	1 cut(s)	277
RseI	CAYNNNNRTG	1 cut(s)	254
SalI	GTCGAC	1 cut(s)	32
SaqAI	TTAA	2 cut(s)	732, 754
SatI	GCNGC	2 cut(s)	73, 401
Sau3AI	GATC	3 cut(s)	144, 525, 622
Sau96I	GGNCC	3 cut(s)	136, 269, 420
SchI	GAGTC	1 cut(s)	63
ScrFI	CCNGG	1 cut(s)	330
SduI	GDGCHC	1 cut(s)	310
SinI	GGWCC	2 cut(s)	269, 420
SmiMI	CAYNNNNRTG	1 cut(s)	254
SmlI	CTYRAG	3 cut(s)	414, 494, 731
SmoI	CTYRAG	3 cut(s)	414, 494, 731
SpeI	ACTAGT	1 cut(s)	263
Sse9I	AATT	1 cut(s)	608
SseBI	AGGCCT	1 cut(s)	225
SsiI	CCGC	3 cut(s)	25, 72, 155
SspMI	CTAG	2 cut(s)	264, 509
StuI	AGGCCT	1 cut(s)	225
StyD4I	CCNGG	1 cut(s)	328
StyI	CCWWGG	2 cut(s)	186, 554
TaaI	ACNGT	1 cut(s)	469
TaiI	ACGT	1 cut(s)	93
TaqI	TCGA	2 cut(s)	33, 207
TasI	AATT	1 cut(s)	608
TauI	GCSGC	1 cut(s)	75
Tru1I	TTAA	2 cut(s)	732, 754
Tru9I	TTAA	2 cut(s)	732, 754
TscAI	CASTG	4 cut(s)	206, 474, 528, 538
TseFI	GTSAC	3 cut(s)	181, 463, 664
TseI	GCWGC	1 cut(s)	400
Tsp45I	GTSAC	3 cut(s)	181, 463, 664
TspDTI	ATGAA	4 cut(s)	17, 119, 242, 596
TspRI	CASTG	4 cut(s)	206, 474, 528, 538
Vha464I	CTTAAG	1 cut(s)	731
VpaK11BI	GGWCC	2 cut(s)	269, 420
XagI	CCTNNNNNAGG	1 cut(s)	314
XapI	RAATTY	1 cut(s)	608
XbaI	TCTAGA	1 cut(s)	508
XmiI	GTMKAC	1 cut(s)	33
XmnI	GAANNNNTTC	1 cut(s)	110
XspI	CTAG	2 cut(s)	264, 509

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.