Plant pleckstrin homology-like region
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G22810 AT3G22810 AT3G22810 AT4G14740 AT4G14740 AT4G14740 AT4G14740 AT5G43870 AT5G43870 |
| fragaria_vesca | FvH4_4g01030 FvH4_4g01030 FvH4_4g01030 FvH4_4g01030 |
| malus_domestica | MD13G1198600.v1.1 MD16G1198700.v1.1 |
| prunus_persica | Prupe.1G020300_v2.0.a1 Prupe.1G020300_v2.0.a1 |
| pyrus_communis | pycom13g17240 pycom16g16750 |
| rosa_chinensis | RchiOBHm_Chr4g0387611 |
| rosa_laevigata | RLG00000010107 |
| rosa_multiflora | Rmu_sc0003953.1_g000004 Rmu_sc0012183.1_g000002 |
| rosa_roxburghii | Rroxscaffold_5G00334290 |
| rosa_rugosa | Rorug03G0311200 Rorug03G0311300 Rorug03G0311400 |
| rosa_samantha | Rh4AG017100 Rh4BG011900 Rh4CG018300 Rh4DG012900 |
| rosa_wichuraiana | Rw4G001090 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 213 |
| Acc36I | ACCTGC | 1 cut(s) | 1084 |
| AccB1I | GGYRCC | 2 cut(s) | 220, 479 |
| AccII | CGCG | 6 cut(s) | 146, 550, 575, 605, 683, 698 |
| AclI | AACGTT | 2 cut(s) | 53, 789 |
| AclWI | GGATC | 2 cut(s) | 12, 184 |
| AcoI | YGGCCR | 3 cut(s) | 448, 666, 1195 |
| AcsI | RAATTY | 2 cut(s) | 1222, 1268 |
| AcuI | CTGAAG | 3 cut(s) | 144, 261, 1262 |
| AcyI | GRCGYC | 1 cut(s) | 210 |
| AdeI | CACNNNGTG | 1 cut(s) | 1313 |
| AfaI | GTAC | 2 cut(s) | 103, 922 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 489, 932 |
| AflIII | ACRYGT | 2 cut(s) | 548, 1120 |
| AgsI | TTSAA | 4 cut(s) | 132, 877, 1105, 1268 |
| AjnI | CCWGG | 1 cut(s) | 1192 |
| AleI | CACNNNNGTG | 2 cut(s) | 218, 456 |
| AluBI | AGCT | 9 cut(s) | 137, 366, 568, 590, 728, 746, 839, 851, 1010 |
| AluI | AGCT | 9 cut(s) | 137, 366, 568, 590, 728, 746, 839, 851, 1010 |
| Alw21I | GWGCWC | 2 cut(s) | 556, 759 |
| Alw26I | GTCTC | 3 cut(s) | 153, 346, 539 |
| Alw44I | GTGCAC | 1 cut(s) | 552 |
| AlwI | GGATC | 2 cut(s) | 12, 184 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 629 |
| Ama87I | CYCGRG | 1 cut(s) | 1208 |
| AoxI | GGCC | 5 cut(s) | 448, 666, 762, 1190, 1195 |
| ApaLI | GTGCAC | 1 cut(s) | 552 |
| ApeKI | GCWGC | 8 cut(s) | 599, 611, 620, 623, 728, 827, 830, 851 |
| ApoI | RAATTY | 2 cut(s) | 1222, 1268 |
| AseI | ATTAAT | 1 cut(s) | 1080 |
| AspS9I | GGNCC | 2 cut(s) | 520, 1131 |
| AsuC2I | CCSGG | 2 cut(s) | 477, 1199 |
| AsuHPI | GGTGA | 3 cut(s) | 312, 364, 1058 |
| AsuNHI | GCTAGC | 1 cut(s) | 1006 |
| AvaI | CYCGRG | 1 cut(s) | 1208 |
| AvaII | GGWCC | 2 cut(s) | 520, 1131 |
| BaeGI | GKGCMC | 1 cut(s) | 556 |
| BalI | TGGCCA | 1 cut(s) | 668 |
| BanI | GGYRCC | 2 cut(s) | 220, 479 |
| BanII | GRGCYC | 1 cut(s) | 437 |
| BbsI | GAAGAC | 2 cut(s) | 1112, 1250 |
| Bbv12I | GWGCWC | 2 cut(s) | 556, 759 |
| BbvI | GCAGC | 8 cut(s) | 586, 598, 607, 635, 715, 814, 817, 838 |
| BccI | CCATC | 1 cut(s) | 1142 |
| BceAI | ACGGC | 2 cut(s) | 256, 463 |
| BciT130I | CCWGG | 1 cut(s) | 1194 |
| BcnI | CCSGG | 2 cut(s) | 477, 1199 |
| BcoDI | GTCTC | 3 cut(s) | 153, 346, 539 |
| BfaI | CTAG | 1 cut(s) | 1007 |
| BfmI | CTRYAG | 5 cut(s) | 585, 621, 729, 909, 969 |
| BfuAI | ACCTGC | 1 cut(s) | 1084 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 608 |
| Bme1390I | CCNGG | 3 cut(s) | 477, 1194, 1199 |
| Bme18I | GGWCC | 2 cut(s) | 520, 1131 |
| BmeT110I | CYCGRG | 1 cut(s) | 1208 |
| BmgT120I | GGNCC | 2 cut(s) | 520, 1131 |
| BmiI | GGNNCC | 3 cut(s) | 222, 481, 1132 |
| BmrFI | CCNGG | 3 cut(s) | 477, 1194, 1199 |
| BmsI | GCATC | 1 cut(s) | 252 |
| BmtI | GCTAGC | 1 cut(s) | 1010 |
| BpiI | GAAGAC | 2 cut(s) | 1112, 1250 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 343, 375 |
| BpmI | CTGGAG | 1 cut(s) | 612 |
| BpuMI | CCSGG | 2 cut(s) | 477, 1199 |
| BsaAI | YACGTR | 2 cut(s) | 101, 458 |
| BsaHI | GRCGYC | 1 cut(s) | 210 |
| BsaJI | CCNNGG | 2 cut(s) | 603, 681 |
| BsaWI | WCCGGW | 1 cut(s) | 322 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 80, 110, 749, 779 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 489, 932 |
| Bse118I | RCCGGY | 2 cut(s) | 522, 1183 |
| Bse3DI | GCAATG | 2 cut(s) | 891, 1332 |
| BseBI | CCWGG | 1 cut(s) | 1194 |
| BseDI | CCNNGG | 2 cut(s) | 603, 681 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 489, 932 |
| BseMI | GCAATG | 2 cut(s) | 891, 1332 |
| BseMII | CTCAG | 2 cut(s) | 329, 650 |
| BseRI | GAGGAG | 1 cut(s) | 861 |
| BseSI | GKGCMC | 1 cut(s) | 556 |
| BseXI | GCAGC | 8 cut(s) | 586, 598, 607, 635, 715, 814, 817, 838 |
| BseYI | CCCAGC | 1 cut(s) | 1127 |
| BsgI | GTGCAG | 1 cut(s) | 837 |
| Bsh1236I | CGCG | 6 cut(s) | 146, 550, 575, 605, 683, 698 |
| BshFI | GGCC | 5 cut(s) | 450, 668, 764, 1192, 1197 |
| BshNI | GGYRCC | 2 cut(s) | 220, 479 |
| BsiHKAI | GWGCWC | 2 cut(s) | 556, 759 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1208 |
| BsiSI | CCGG | 8 cut(s) | 224, 323, 477, 486, 523, 801, 1184, 1198 |
| BslFI | GGGAC | 1 cut(s) | 1144 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 489, 932 |
| BsmAI | GTCTC | 3 cut(s) | 153, 346, 539 |
| BsmBI | CGTCTC | 2 cut(s) | 153, 539 |
| BsmFI | GGGAC | 1 cut(s) | 1144 |
| BsnI | GGCC | 5 cut(s) | 450, 668, 764, 1192, 1197 |
| BsoBI | CYCGRG | 1 cut(s) | 1208 |
| Bsp1286I | GDGCHC | 3 cut(s) | 437, 556, 759 |
| Bsp143I | GATC | 7 cut(s) | 4, 189, 387, 748, 1048, 1071, 1297 |
| BspANI | GGCC | 5 cut(s) | 450, 668, 764, 1192, 1197 |
| BspCNI | CTCAG | 2 cut(s) | 328, 649 |
| BspFNI | CGCG | 6 cut(s) | 146, 550, 575, 605, 683, 698 |
| BspHI | TCATGA | 1 cut(s) | 810 |
| BspLI | GGNNCC | 3 cut(s) | 222, 481, 1132 |
| BspMAI | CTGCAG | 2 cut(s) | 625, 733 |
| BspMI | ACCTGC | 1 cut(s) | 1084 |
| BspOI | GCTAGC | 1 cut(s) | 1010 |
| BspPI | GGATC | 2 cut(s) | 12, 184 |
| BspT107I | GGYRCC | 2 cut(s) | 220, 479 |
| BsrDI | GCAATG | 2 cut(s) | 891, 1332 |
| BsrFI | RCCGGY | 2 cut(s) | 522, 1183 |
| BssAI | RCCGGY | 2 cut(s) | 522, 1183 |
| BssECI | CCNNGG | 2 cut(s) | 603, 681 |
| BssMI | GATC | 7 cut(s) | 4, 189, 387, 748, 1048, 1071, 1297 |
| BssNI | GRCGYC | 1 cut(s) | 210 |
| Bst2UI | CCWGG | 1 cut(s) | 1194 |
| Bst4CI | ACNGT | 5 cut(s) | 200, 380, 428, 502, 1249 |
| Bst6I | CTCTTC | 2 cut(s) | 530, 537 |
| BstACI | GRCGYC | 1 cut(s) | 210 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 560, 629 |
| BstBAI | YACGTR | 2 cut(s) | 101, 458 |
| BstC8I | GCNNGC | 2 cut(s) | 552, 1008 |
| BstDEI | CTNAG | 3 cut(s) | 315, 636, 1110 |
| BstDSI | CCRYGG | 2 cut(s) | 603, 681 |
| BstFNI | CGCG | 6 cut(s) | 146, 550, 575, 605, 683, 698 |
| BstKTI | GATC | 7 cut(s) | 7, 192, 390, 751, 1051, 1074, 1300 |
| BstMAI | GTCTC | 3 cut(s) | 153, 346, 539 |
| BstMBI | GATC | 7 cut(s) | 4, 189, 387, 748, 1048, 1071, 1297 |
| BstNI | CCWGG | 1 cut(s) | 1194 |
| BstNSI | RCATGY | 1 cut(s) | 1124 |
| BstSCI | CCNGG | 3 cut(s) | 475, 1192, 1197 |
| BstSFI | CTRYAG | 5 cut(s) | 585, 621, 729, 909, 969 |
| BstSLI | GKGCMC | 1 cut(s) | 556 |
| BstUI | CGCG | 6 cut(s) | 146, 550, 575, 605, 683, 698 |
| BstV1I | GCAGC | 8 cut(s) | 586, 598, 607, 635, 715, 814, 817, 838 |
| BstV2I | GAAGAC | 2 cut(s) | 1112, 1250 |
| BstX2I | RGATCY | 1 cut(s) | 189 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 458 |
| BstYI | RGATCY | 1 cut(s) | 189 |
| BsuRI | GGCC | 5 cut(s) | 450, 668, 764, 1192, 1197 |
| BtgI | CCRYGG | 2 cut(s) | 603, 681 |
| BtgZI | GCGATG | 1 cut(s) | 318 |
| BtsI | GCAGTG | 1 cut(s) | 627 |
| BtsIMutI | CAGTG | 1 cut(s) | 627 |
| BveI | ACCTGC | 1 cut(s) | 1084 |
| Cac8I | GCNNGC | 2 cut(s) | 552, 1008 |
| CaiI | CAGNNNCTG | 1 cut(s) | 629 |
| CciI | TCATGA | 1 cut(s) | 810 |
| Cfr10I | RCCGGY | 2 cut(s) | 522, 1183 |
| Cfr13I | GGNCC | 2 cut(s) | 520, 1131 |
| Cfr42I | CCGCGG | 2 cut(s) | 606, 684 |
| CseI | GACGC | 2 cut(s) | 135, 556 |
| Csp6I | GTAC | 2 cut(s) | 102, 921 |
| CviAII | CATG | 5 cut(s) | 298, 310, 811, 1121, 1321 |
| CviQI | GTAC | 2 cut(s) | 102, 921 |
| DdeI | CTNAG | 3 cut(s) | 315, 636, 1110 |
| DpnI | GATC | 7 cut(s) | 6, 191, 389, 750, 1050, 1073, 1299 |
| DpnII | GATC | 7 cut(s) | 4, 189, 387, 748, 1048, 1071, 1297 |
| DraI | TTTAAA | 1 cut(s) | 58 |
| DraIII | CACNNNGTG | 1 cut(s) | 1313 |
| EaeI | YGGCCR | 3 cut(s) | 448, 666, 1195 |
| Eam1104I | CTCTTC | 2 cut(s) | 530, 537 |
| EarI | CTCTTC | 2 cut(s) | 530, 537 |
| Eco24I | GRGCYC | 1 cut(s) | 437 |
| Eco32I | GATATC | 1 cut(s) | 808 |
| Eco47I | GGWCC | 2 cut(s) | 520, 1131 |
| Eco57I | CTGAAG | 3 cut(s) | 144, 261, 1262 |
| Eco88I | CYCGRG | 1 cut(s) | 1208 |
| EcoRI | GAATTC | 1 cut(s) | 1268 |
| EcoRII | CCWGG | 1 cut(s) | 1192 |
| EcoRV | GATATC | 1 cut(s) | 808 |
| EcoT38I | GRGCYC | 1 cut(s) | 437 |
| Esp3I | CGTCTC | 2 cut(s) | 153, 539 |
| FaeI | CATG | 5 cut(s) | 301, 313, 814, 1124, 1324 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1035, 1067 |
| FaqI | GGGAC | 1 cut(s) | 1144 |
| FatI | CATG | 5 cut(s) | 297, 309, 810, 1120, 1320 |
| FauI | CCCGC | 1 cut(s) | 1046 |
| FriOI | GRGCYC | 1 cut(s) | 437 |
| FspBI | CTAG | 1 cut(s) | 1007 |
| GsaI | CCCAGC | 1 cut(s) | 1131 |
| GsuI | CTGGAG | 1 cut(s) | 612 |
| HaeIII | GGCC | 5 cut(s) | 450, 668, 764, 1192, 1197 |
| HapII | CCGG | 8 cut(s) | 224, 323, 477, 486, 523, 801, 1184, 1198 |
| HgaI | GACGC | 2 cut(s) | 135, 556 |
| Hin1I | GRCGYC | 1 cut(s) | 210 |
| Hin1II | CATG | 5 cut(s) | 301, 313, 814, 1124, 1324 |
| HincII | GTYRAC | 1 cut(s) | 787 |
| HindII | GTYRAC | 1 cut(s) | 787 |
| HinfI | GANTC | 3 cut(s) | 80, 677, 904 |
| HpaI | GTTAAC | 1 cut(s) | 787 |
| HpaII | CCGG | 8 cut(s) | 224, 323, 477, 486, 523, 801, 1184, 1198 |
| HphI | GGTGA | 3 cut(s) | 312, 364, 1058 |
| Hpy166II | GTNNAC | 3 cut(s) | 554, 787, 923 |
| Hpy188I | TCNGA | 6 cut(s) | 187, 208, 280, 387, 400, 1342 |
| Hpy188III | TCNNGA | 4 cut(s) | 132, 648, 752, 811 |
| Hpy8I | GTNNAC | 3 cut(s) | 554, 787, 923 |
| Hpy99I | CGWCG | 2 cut(s) | 146, 410 |
| HpyAV | CCTTC | 2 cut(s) | 447, 871 |
| HpyCH4III | ACNGT | 5 cut(s) | 200, 380, 428, 502, 1249 |
| HpyCH4IV | ACGT | 6 cut(s) | 53, 100, 210, 304, 457, 789 |
| HpyCH4V | TGCA | 7 cut(s) | 554, 563, 623, 731, 854, 993, 1278 |
| HpyF3I | CTNAG | 3 cut(s) | 315, 636, 1110 |
| HpySE526I | ACGT | 6 cut(s) | 53, 100, 210, 304, 457, 789 |
| Hsp92I | GRCGYC | 1 cut(s) | 210 |
| Hsp92II | CATG | 5 cut(s) | 301, 313, 814, 1124, 1324 |
| KspAI | GTTAAC | 1 cut(s) | 787 |
| KspI | CCGCGG | 2 cut(s) | 606, 684 |
| Kzo9I | GATC | 7 cut(s) | 4, 189, 387, 748, 1048, 1071, 1297 |
| LmnI | GCTCC | 2 cut(s) | 743, 848 |
| Lsp1109I | GCAGC | 8 cut(s) | 586, 598, 607, 635, 715, 814, 817, 838 |
| LweI | GCATC | 1 cut(s) | 252 |
| MaeI | CTAG | 1 cut(s) | 1007 |
| MaeII | ACGT | 6 cut(s) | 53, 100, 210, 304, 457, 789 |
| MaeIII | GTNAC | 3 cut(s) | 96, 211, 318 |
| MalI | GATC | 7 cut(s) | 6, 191, 389, 750, 1050, 1073, 1299 |
| MboI | GATC | 7 cut(s) | 4, 189, 387, 748, 1048, 1071, 1297 |
| MflI | RGATCY | 1 cut(s) | 189 |
| MhlI | GDGCHC | 3 cut(s) | 437, 556, 759 |
| MlsI | TGGCCA | 1 cut(s) | 668 |
| MluCI | AATT | 7 cut(s) | 419, 857, 976, 1001, 1022, 1222, 1268 |
| MluI | ACGCGT | 1 cut(s) | 548 |
| MluNI | TGGCCA | 1 cut(s) | 668 |
| MlyI | GAGTC | 1 cut(s) | 671 |
| MmeI | TCCRAC | 2 cut(s) | 74, 423 |
| Mox20I | TGGCCA | 1 cut(s) | 668 |
| MscI | TGGCCA | 1 cut(s) | 668 |
| MseI | TTAA | 9 cut(s) | 57, 290, 414, 444, 786, 860, 1029, 1080, 1173 |
| MslI | CAYNNNNRTG | 2 cut(s) | 218, 456 |
| Msp20I | TGGCCA | 1 cut(s) | 668 |
| MspA1I | CMGCKG | 3 cut(s) | 605, 683, 827 |
| MspI | CCGG | 8 cut(s) | 224, 323, 477, 486, 523, 801, 1184, 1198 |
| MspR9I | CCNGG | 3 cut(s) | 477, 1194, 1199 |
| MssI | GTTTAAAC | 1 cut(s) | 58 |
| MvaI | CCWGG | 1 cut(s) | 1194 |
| MvnI | CGCG | 6 cut(s) | 146, 550, 575, 605, 683, 698 |
| NciI | CCSGG | 2 cut(s) | 477, 1199 |
| NdeII | GATC | 7 cut(s) | 4, 189, 387, 748, 1048, 1071, 1297 |
| NheI | GCTAGC | 1 cut(s) | 1006 |
| NlaIII | CATG | 5 cut(s) | 301, 313, 814, 1124, 1324 |
| NlaIV | GGNNCC | 3 cut(s) | 222, 481, 1132 |
| NmuCI | GTSAC | 3 cut(s) | 96, 211, 318 |
| NspI | RCATGY | 1 cut(s) | 1124 |
| OliI | CACNNNNGTG | 2 cut(s) | 218, 456 |
| PaeR7I | CTCGAG | 1 cut(s) | 1208 |
| PagI | TCATGA | 1 cut(s) | 810 |
| PciI | ACATGT | 1 cut(s) | 1120 |
| PfeI | GAWTC | 2 cut(s) | 80, 904 |
| PleI | GAGTC | 1 cut(s) | 671 |
| PmeI | GTTTAAAC | 1 cut(s) | 58 |
| PpsI | GAGTC | 1 cut(s) | 671 |
| Ppu21I | YACGTR | 2 cut(s) | 101, 458 |
| PscI | ACATGT | 1 cut(s) | 1120 |
| PshBI | ATTAAT | 1 cut(s) | 1080 |
| Psp1406I | AACGTT | 2 cut(s) | 53, 789 |
| Psp6I | CCWGG | 1 cut(s) | 1192 |
| PspFI | CCCAGC | 1 cut(s) | 1127 |
| PspGI | CCWGG | 1 cut(s) | 1192 |
| PspN4I | GGNNCC | 3 cut(s) | 222, 481, 1132 |
| PspPI | GGNCC | 2 cut(s) | 520, 1131 |
| PspXI | VCTCGAGB | 1 cut(s) | 1208 |
| PstI | CTGCAG | 2 cut(s) | 625, 733 |
| PstNI | CAGNNNCTG | 1 cut(s) | 629 |
| PsuI | RGATCY | 1 cut(s) | 189 |
| RsaI | GTAC | 2 cut(s) | 103, 922 |
| RsaNI | GTAC | 2 cut(s) | 102, 921 |
| RseI | CAYNNNNRTG | 2 cut(s) | 218, 456 |
| SacII | CCGCGG | 2 cut(s) | 606, 684 |
| SaqAI | TTAA | 9 cut(s) | 57, 290, 414, 444, 786, 860, 1029, 1080, 1173 |
| Sau3AI | GATC | 7 cut(s) | 4, 189, 387, 748, 1048, 1071, 1297 |
| Sau96I | GGNCC | 2 cut(s) | 520, 1131 |
| SchI | GAGTC | 1 cut(s) | 671 |
| ScrFI | CCNGG | 3 cut(s) | 477, 1194, 1199 |
| SduI | GDGCHC | 3 cut(s) | 437, 556, 759 |
| SfaNI | GCATC | 1 cut(s) | 252 |
| SfcI | CTRYAG | 5 cut(s) | 585, 621, 729, 909, 969 |
| Sfr274I | CTCGAG | 1 cut(s) | 1208 |
| Sfr303I | CCGCGG | 2 cut(s) | 606, 684 |
| SgrBI | CCGCGG | 2 cut(s) | 606, 684 |
| SinI | GGWCC | 2 cut(s) | 520, 1131 |
| SlaI | CTCGAG | 1 cut(s) | 1208 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 218, 456 |
| SmlI | CTYRAG | 1 cut(s) | 1208 |
| SmoI | CTYRAG | 1 cut(s) | 1208 |
| Sse9I | AATT | 7 cut(s) | 419, 857, 976, 1001, 1022, 1222, 1268 |
| SspI | AATATT | 1 cut(s) | 1101 |
| SspMI | CTAG | 1 cut(s) | 1007 |
| StyD4I | CCNGG | 3 cut(s) | 475, 1192, 1197 |
| TaaI | ACNGT | 5 cut(s) | 200, 380, 428, 502, 1249 |
| TaiI | ACGT | 6 cut(s) | 56, 103, 213, 307, 460, 792 |
| TaqI | TCGA | 5 cut(s) | 405, 641, 1070, 1209, 1272 |
| TasI | AATT | 7 cut(s) | 419, 857, 976, 1001, 1022, 1222, 1268 |
| TauI | GCSGC | 7 cut(s) | 172, 578, 605, 698, 713, 827, 899 |
| TfiI | GAWTC | 2 cut(s) | 80, 904 |
| Tru1I | TTAA | 9 cut(s) | 57, 290, 414, 444, 786, 860, 1029, 1080, 1173 |
| Tru9I | TTAA | 9 cut(s) | 57, 290, 414, 444, 786, 860, 1029, 1080, 1173 |
| TscAI | CASTG | 1 cut(s) | 634 |
| TseFI | GTSAC | 3 cut(s) | 96, 211, 318 |
| TseI | GCWGC | 8 cut(s) | 599, 611, 620, 623, 728, 827, 830, 851 |
| Tsp45I | GTSAC | 3 cut(s) | 96, 211, 318 |
| TspDTI | ATGAA | 4 cut(s) | 246, 321, 453, 1043 |
| TspGWI | ACGGA | 1 cut(s) | 757 |
| TspRI | CASTG | 1 cut(s) | 634 |
| VneI | GTGCAC | 1 cut(s) | 552 |
| VpaK11BI | GGWCC | 2 cut(s) | 520, 1131 |
| VspI | ATTAAT | 1 cut(s) | 1080 |
| XapI | RAATTY | 2 cut(s) | 1222, 1268 |
| XceI | RCATGY | 1 cut(s) | 1124 |
| XhoI | CTCGAG | 1 cut(s) | 1208 |
| XspI | CTAG | 1 cut(s) | 1007 |
| ZraI | GACGTC | 1 cut(s) | 211 |