Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0004295

Physical Location & Seq

Genomic Coordinates Forward (+)

17620525 .. 17624232

Gene Structure 3708 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1198600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1383 bp

ATGGACCCGGTACAGGCCGCCCTGTTCCTGCCACCGGAGACTCCCCGCGAGCCCATGGAGTTCCTCTCCCGCTCTTGGAGCGTCTCAGCTCTCGAAGTCTCCAAAGCCTTGGCCCCACCCCCTGGCCAGACCCAACTCACAAACCTCAACCTCAGCTCTGCCGTCAATGGCGGTGGCGGTGGTCCCATACTAGAGGACCTTGCCGGGGAGATAGACGAGAGCGCCACTTTTTCTGGCAACCCATTTTCTTTTGCTTCTTCCGAGACCTCTCAGCTCGTCATGGAGCGTATCATGTCACAGTCGCAAGAGGTATCTCCACGAACATCCGGCAGGCTGTCGCACAGCAGTGGTCCTCTCAACGGTTCCTTAACCGACAGCCCACCTGTGTCCCCCTCCGAAATCGACGATGTTAAGTATGGACGCTCTAACAACCACCACAACACCCAATTCAGAGCCGCCACTCCTAGTGGCGCCCCCGTGTCTGGTGGTGGTAAGACGGTGGGCAGGTGGCTTAAGGATAGGAGGGAGAAGAAGAAAGAGGAGGCTAGAGCCCTGAATGCTCAGCTTCATGCTGCTGTTTCTGTTGCTGGGGTGGCTTCTGCCATCGCCGCCATTGCTGCCGCCACTGCCGCCTCATCTGGGTCGGGGAAAGATGAGCATATGGCGAAGACTGACATGGCTGTGGCCTCTGCTGCCACTTTGGTTGCTGCCCAGTGTGTGGAGGCGGCTGAGGCCATGGGAGCTGAGCGGGAACACCTTGCTACGGTTGTCAGCTCTGCCGTGAACGTCCGGTCTGCTGGCGATATCATGACCTTAACTGCTGCAGCAGCAACAGCCTTACGCGGTGCAGCGACATTGAAGGCGAGGGCGTTGAAGGAAGTGTGGAATATAGCTGCAGTTATCCCTGTTGAGAAAGGCTCAGGAGTAGTTGGTAACGGAAGTAACGGTAATTCCAACAGTAGTTTCAGTGGTGAACTTGTCCCTGAAGAGAATTTTCTCGGCATCTGCAGTAGAGAATTGCTTGCAAAGGGTTGTGAGCTCCTCAAGCGCACCCGCGGAGGTGATCTTCATTGGAAAATCGTCTCTGTTTATATCCATCGAACGGGTCAGGTTATGCTGAAGATGAAGAGCAGGCATGTTGCTGGGACCATCACAAAAAAGAAAAAGAATGTGGTGCTGGAAGTGATCAAGGACATGCCGGCTTGGCCCGGCCGCCACTTGCTCGAGGGGGGCGAGCACCGGCGTTACTTTGGGCTCAAGACTGTTATGCGCGGAGTTGTGGAGTTTGAGTGCCGGAACCAGAGGGAGTACGACATTTGGACTCTGGGCGTGTCGAGGCTCCTCAGCATTGTTGCAGAGAGGCACAATAGACATAGGATCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Auxin_canalis PH_2

Protein Analysis

461

Amino Acids

48.87

Weight (kDa)

9.18

Isoelectric Point (pI)

40.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Auxin_canalis	PF05703	12 - 306	1.1e-116	Auxin canalisation
PH_2	PF08458	346 - 451	5.9e-42	Plant pleckstrin homology-like region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004295)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G22810 AT3G22810 AT3G22810 AT4G14740 AT4G14740 AT4G14740 AT4G14740 AT5G43870 AT5G43870
fragaria_vesca	FvH4_4g01030 FvH4_4g01030 FvH4_4g01030 FvH4_4g01030
malus_domestica	MD13G1198600.v1.1 MD16G1198700.v1.1
prunus_persica	Prupe.1G020300_v2.0.a1 Prupe.1G020300_v2.0.a1
pyrus_communis	pycom13g17240 pycom16g16750
rosa_chinensis	RchiOBHm_Chr4g0387611
rosa_laevigata	RLG00000010107
rosa_multiflora	Rmu_sc0003953.1_g000004 Rmu_sc0012183.1_g000002
rosa_roxburghii	Rroxscaffold_5G00334290
rosa_rugosa	Rorug03G0311200 Rorug03G0311300 Rorug03G0311400
rosa_samantha	Rh4AG017100 Rh4BG011900 Rh4CG018300 Rh4DG012900
rosa_wichuraiana	Rw4G001090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	495
Acc36I	ACCTGC	1 cut(s)	495
AccB1I	GGYRCC	1 cut(s)	470
AccB7I	CCANNNNNTGG	2 cut(s)	122, 718
AccBSI	CCGCTC	2 cut(s)	72, 748
AccII	CGCG	4 cut(s)	48, 843, 1056, 1272
AcoI	YGGCCR	2 cut(s)	124, 1210
AcsI	RAATTY	1 cut(s)	991
AcuI	CTGAAG	2 cut(s)	1005, 1139
AcyI	GRCGYC	1 cut(s)	471
AfaI	GTAC	2 cut(s)	12, 1310
AflII	CTTAAG	1 cut(s)	512
AgsI	TTSAA	2 cut(s)	859, 874
AjnI	CCWGG	1 cut(s)	121
AjuI	GAANNNNNNNTTGG	2 cut(s)	947, 979
AleI	CACNNNNGTG	1 cut(s)	345
AluBI	AGCT	8 cut(s)	89, 156, 274, 565, 743, 774, 893, 1039
AluI	AGCT	8 cut(s)	89, 156, 274, 565, 743, 774, 893, 1039
Alw21I	GWGCWC	2 cut(s)	1041, 1239
Alw26I	GTCTC	5 cut(s)	32, 88, 103, 257, 1087
Ama87I	CYCGRG	1 cut(s)	1223
AoxI	GGCC	7 cut(s)	15, 111, 124, 684, 732, 1205, 1210
ApeKI	GCWGC	9 cut(s)	572, 617, 692, 707, 821, 824, 827, 848, 893
ApoI	RAATTY	1 cut(s)	991
AspLEI	GCGC	4 cut(s)	224, 473, 1050, 1272
AspS9I	GGNCC	7 cut(s)	4, 112, 182, 196, 350, 1146, 1206
AsuC2I	CCSGG	3 cut(s)	8, 205, 1209
AsuHPI	GGTGA	2 cut(s)	983, 1073
AvaI	CYCGRG	1 cut(s)	1223
AvaII	GGWCC	5 cut(s)	4, 182, 196, 350, 1146
BalI	TGGCCA	1 cut(s)	126
BanI	GGYRCC	1 cut(s)	470
BanII	GRGCYC	4 cut(s)	54, 553, 1041, 1257
BbsI	GAAGAC	1 cut(s)	674
Bbv12I	GWGCWC	2 cut(s)	1041, 1239
BbvCI	CCTCAGC	3 cut(s)	152, 729, 1343
BbvI	GCAGC	9 cut(s)	559, 604, 679, 694, 808, 836, 839, 860, 880
BccI	CCATC	3 cut(s)	611, 1104, 1157
BceAI	ACGGC	2 cut(s)	146, 764
BciT130I	CCWGG	1 cut(s)	123
BclI	TGATCA	1 cut(s)	1185
BcnI	CCSGG	3 cut(s)	8, 205, 1209
BcoDI	GTCTC	5 cut(s)	32, 88, 103, 257, 1087
BfaI	CTAG	4 cut(s)	191, 465, 546, 1381
BfmI	CTRYAG	3 cut(s)	822, 894, 1006
BfoI	RGCGCY	2 cut(s)	225, 474
BfrI	CTTAAG	1 cut(s)	512
BfuAI	ACCTGC	1 cut(s)	495
BglI	GCCNNNNNGGC	1 cut(s)	1204
BlpI	GCTNAGC	2 cut(s)	561, 744
Bme1390I	CCNGG	4 cut(s)	8, 123, 205, 1209
Bme18I	GGWCC	5 cut(s)	4, 182, 196, 350, 1146
BmeT110I	CYCGRG	1 cut(s)	1223
BmgT120I	GGNCC	7 cut(s)	4, 112, 182, 196, 350, 1146, 1206
BmiI	GGNNCC	8 cut(s)	6, 114, 184, 364, 472, 1147, 1298, 1340
BmrFI	CCNGG	4 cut(s)	8, 123, 205, 1209
BmrI	ACTGGG	1 cut(s)	706
BmsI	GCATC	1 cut(s)	1011
BmuI	ACTGGG	1 cut(s)	706
BpiI	GAAGAC	1 cut(s)	674
BplI	GAGNNNNNCTC	4 cut(s)	50, 82, 902, 934
Bpu10I	CCTNAGC	4 cut(s)	152, 729, 919, 1343
Bpu1102I	GCTNAGC	2 cut(s)	561, 744
BpuEI	CTTGAG	2 cut(s)	1028, 1241
BpuMI	CCSGG	3 cut(s)	8, 205, 1209
BsaHI	GRCGYC	1 cut(s)	471
BsaI	GGTCTC	1 cut(s)	257
BsaJI	CCNNGG	6 cut(s)	54, 108, 121, 204, 735, 1054
BsaWI	WCCGGW	2 cut(s)	34, 789
BsaXI	ACNNNNNCTCC	2 cut(s)	1274, 1304
Bse118I	RCCGGY	2 cut(s)	1198, 1239
Bse1I	ACTGG	1 cut(s)	712
Bse3DI	GCAATG	1 cut(s)	612
BseBI	CCWGG	1 cut(s)	123
BseDI	CCNNGG	6 cut(s)	54, 108, 121, 204, 735, 1054
BseGI	GGATG	1 cut(s)	323
BseMI	GCAATG	1 cut(s)	612
BseMII	CTCAG	8 cut(s)	99, 166, 284, 575, 720, 735, 933, 1357
BseNI	ACTGG	1 cut(s)	712
BseRI	GAGGAG	3 cut(s)	554, 1031, 1331
BseX3I	CGGCCG	1 cut(s)	1210
BseXI	GCAGC	9 cut(s)	559, 604, 679, 694, 808, 836, 839, 860, 880
BseYI	CCCAGC	2 cut(s)	587, 1142
BsgI	GTGCAG	1 cut(s)	867
Bsh1236I	CGCG	4 cut(s)	48, 843, 1056, 1272
Bsh1285I	CGRYCG	1 cut(s)	1213
BshFI	GGCC	7 cut(s)	17, 113, 126, 686, 734, 1207, 1212
BshNI	GGYRCC	1 cut(s)	470
BsiEI	CGRYCG	1 cut(s)	1213
BsiHKAI	GWGCWC	2 cut(s)	1041, 1239
BsiHKCI	CYCGRG	1 cut(s)	1223
BsiSI	CCGG	9 cut(s)	8, 35, 204, 327, 790, 1199, 1209, 1240, 1294
BslFI	GGGAC	4 cut(s)	168, 373, 965, 1159
BsmAI	GTCTC	5 cut(s)	32, 88, 103, 257, 1087
BsmBI	CGTCTC	2 cut(s)	88, 1087
BsmFI	GGGAC	4 cut(s)	168, 373, 965, 1159
BsmI	GAATGC	1 cut(s)	562
BsnI	GGCC	7 cut(s)	17, 113, 126, 686, 734, 1207, 1212
Bso31I	GGTCTC	1 cut(s)	257
BsoBI	CYCGRG	1 cut(s)	1223
Bsp1286I	GDGCHC	5 cut(s)	54, 553, 1041, 1239, 1257
Bsp143I	GATC	3 cut(s)	1063, 1185, 1377
Bsp1720I	GCTNAGC	2 cut(s)	561, 744
Bsp19I	CCATGG	2 cut(s)	54, 735
BspANI	GGCC	7 cut(s)	17, 113, 126, 686, 734, 1207, 1212
BspCNI	CTCAG	8 cut(s)	98, 165, 283, 574, 721, 736, 932, 1356
BspFNI	CGCG	4 cut(s)	48, 843, 1056, 1272
BspHI	TCATGA	1 cut(s)	807
BspLI	GGNNCC	8 cut(s)	6, 114, 184, 364, 472, 1147, 1298, 1340
BspMAI	CTGCAG	3 cut(s)	826, 898, 1010
BspMI	ACCTGC	1 cut(s)	495
BspQI	GCTCTTC	1 cut(s)	1121
BspT107I	GGYRCC	1 cut(s)	470
BspTI	CTTAAG	1 cut(s)	512
BspTNI	GGTCTC	1 cut(s)	257
BsrBI	CCGCTC	2 cut(s)	72, 748
BsrDI	GCAATG	1 cut(s)	612
BsrFI	RCCGGY	2 cut(s)	1198, 1239
BsrI	ACTGG	1 cut(s)	712
BssAI	RCCGGY	2 cut(s)	1198, 1239
BssECI	CCNNGG	6 cut(s)	54, 108, 121, 204, 735, 1054
BssMI	GATC	3 cut(s)	1063, 1185, 1377
BssNI	GRCGYC	1 cut(s)	471
BssT1I	CCWWGG	3 cut(s)	54, 108, 735
Bst2UI	CCWGG	1 cut(s)	123
Bst4CI	ACNGT	7 cut(s)	300, 362, 499, 766, 947, 959, 1264
Bst6I	CTCTTC	2 cut(s)	981, 1121
BstACI	GRCGYC	1 cut(s)	471
BstAFI	CTTAAG	1 cut(s)	512
BstC8I	GCNNGC	7 cut(s)	50, 332, 799, 1023, 1133, 1200, 1235
BstDEI	CTNAG	8 cut(s)	85, 152, 270, 561, 729, 744, 919, 1343
BstDSI	CCRYGG	3 cut(s)	54, 735, 1054
BstF5I	GGATG	1 cut(s)	323
BstFNI	CGCG	4 cut(s)	48, 843, 1056, 1272
BstH2I	RGCGCY	2 cut(s)	225, 474
BstHHI	GCGC	4 cut(s)	224, 473, 1050, 1272
BstKTI	GATC	3 cut(s)	1066, 1188, 1380
BstMAI	GTCTC	5 cut(s)	32, 88, 103, 257, 1087
BstMBI	GATC	3 cut(s)	1063, 1185, 1377
BstMCI	CGRYCG	1 cut(s)	1213
BstNI	CCWGG	1 cut(s)	123
BstNSI	RCATGY	2 cut(s)	1139, 1198
BstSCI	CCNGG	4 cut(s)	6, 121, 203, 1207
BstSFI	CTRYAG	3 cut(s)	822, 894, 1006
BstUI	CGCG	4 cut(s)	48, 843, 1056, 1272
BstV1I	GCAGC	9 cut(s)	559, 604, 679, 694, 808, 836, 839, 860, 880
BstV2I	GAAGAC	1 cut(s)	674
BstX2I	RGATCY	1 cut(s)	1377
BstXI	CCANNNNNNTGG	1 cut(s)	109
BstYI	RGATCY	1 cut(s)	1377
BstZI	CGGCCG	1 cut(s)	1210
BsuRI	GGCC	7 cut(s)	17, 113, 126, 686, 734, 1207, 1212
BtgI	CCRYGG	3 cut(s)	54, 735, 1054
BtgZI	GCGATG	1 cut(s)	589
BtsCI	GGATG	1 cut(s)	323
BtsI	GCAGTG	2 cut(s)	352, 624
BtsIMutI	CAGTG	4 cut(s)	352, 624, 719, 973
BveI	ACCTGC	1 cut(s)	495
Cac8I	GCNNGC	7 cut(s)	50, 332, 799, 1023, 1133, 1200, 1235
CciI	TCATGA	1 cut(s)	807
CfoI	GCGC	4 cut(s)	224, 473, 1050, 1272
Cfr10I	RCCGGY	2 cut(s)	1198, 1239
Cfr13I	GGNCC	7 cut(s)	4, 112, 182, 196, 350, 1146, 1206
Cfr42I	CCGCGG	1 cut(s)	1057
CseI	GACGC	2 cut(s)	70, 429
Csp6I	GTAC	2 cut(s)	11, 1309
CspCI	CAANNNNNGTGG	4 cut(s)	154, 189, 685, 720
CviAII	CATG	9 cut(s)	55, 280, 292, 569, 676, 736, 808, 1136, 1195
CviQI	GTAC	2 cut(s)	11, 1309
DdeI	CTNAG	8 cut(s)	85, 152, 270, 561, 729, 744, 919, 1343
DinI	GGCGCC	1 cut(s)	472
DpnI	GATC	3 cut(s)	1065, 1187, 1379
DpnII	GATC	3 cut(s)	1063, 1185, 1377
EaeI	YGGCCR	2 cut(s)	124, 1210
EagI	CGGCCG	1 cut(s)	1210
Eam1104I	CTCTTC	2 cut(s)	981, 1121
EarI	CTCTTC	2 cut(s)	981, 1121
Ecl136II	GAGCTC	1 cut(s)	1039
EclXI	CGGCCG	1 cut(s)	1210
Eco130I	CCWWGG	3 cut(s)	54, 108, 735
Eco24I	GRGCYC	4 cut(s)	54, 553, 1041, 1257
Eco31I	GGTCTC	1 cut(s)	257
Eco32I	GATATC	1 cut(s)	805
Eco47I	GGWCC	5 cut(s)	4, 182, 196, 350, 1146
Eco52I	CGGCCG	1 cut(s)	1210
Eco53kI	GAGCTC	1 cut(s)	1039
Eco57I	CTGAAG	2 cut(s)	1005, 1139
Eco88I	CYCGRG	1 cut(s)	1223
EcoICRI	GAGCTC	1 cut(s)	1039
EcoO109I	RGGNCCY	1 cut(s)	196
EcoRII	CCWGG	1 cut(s)	121
EcoRV	GATATC	1 cut(s)	805
EcoT14I	CCWWGG	3 cut(s)	54, 108, 735
EcoT38I	GRGCYC	4 cut(s)	54, 553, 1041, 1257
EgeI	GGCGCC	1 cut(s)	472
EheI	GGCGCC	1 cut(s)	472
ErhI	CCWWGG	3 cut(s)	54, 108, 735
Esp3I	CGTCTC	2 cut(s)	88, 1087
FaeI	CATG	9 cut(s)	58, 283, 295, 572, 679, 739, 811, 1139, 1198
FaqI	GGGAC	4 cut(s)	168, 373, 965, 1159
FatI	CATG	9 cut(s)	54, 279, 291, 568, 675, 735, 807, 1135, 1194
FauI	CCCGC	4 cut(s)	53, 77, 741, 1061
FauNDI	CATATG	1 cut(s)	660
FbaI	TGATCA	1 cut(s)	1185
FokI	GGATG	1 cut(s)	310
FriOI	GRGCYC	4 cut(s)	54, 553, 1041, 1257
FspBI	CTAG	4 cut(s)	191, 465, 546, 1381
GlaI	GCGC	4 cut(s)	223, 472, 1049, 1271
GsaI	CCCAGC	2 cut(s)	591, 1146
HaeII	RGCGCY	2 cut(s)	225, 474
HaeIII	GGCC	7 cut(s)	17, 113, 126, 686, 734, 1207, 1212
HapII	CCGG	9 cut(s)	8, 35, 204, 327, 790, 1199, 1209, 1240, 1294
HgaI	GACGC	2 cut(s)	70, 429
HhaI	GCGC	4 cut(s)	224, 473, 1050, 1272
Hin1I	GRCGYC	1 cut(s)	471
Hin1II	CATG	9 cut(s)	58, 283, 295, 572, 679, 739, 811, 1139, 1198
Hin6I	GCGC	4 cut(s)	222, 471, 1048, 1270
HinP1I	GCGC	4 cut(s)	222, 471, 1048, 1270
HinfI	GANTC	2 cut(s)	40, 1321
HpaII	CCGG	9 cut(s)	8, 35, 204, 327, 790, 1199, 1209, 1240, 1294
HphI	GGTGA	2 cut(s)	983, 1073
Hpy166II	GTNNAC	2 cut(s)	784, 974
Hpy188I	TCNGA	3 cut(s)	262, 397, 452
Hpy188III	TCNNGA	4 cut(s)	92, 808, 921, 1258
Hpy8I	GTNNAC	2 cut(s)	784, 974
Hpy99I	CGWCG	1 cut(s)	407
HpyAV	CCTTC	2 cut(s)	853, 868
HpyCH4III	ACNGT	7 cut(s)	300, 362, 499, 766, 947, 959, 1264
HpyCH4IV	ACGT	1 cut(s)	786
HpyCH4V	TGCA	6 cut(s)	824, 848, 896, 1008, 1025, 1355
HpyF3I	CTNAG	8 cut(s)	85, 152, 270, 561, 729, 744, 919, 1343
HpySE526I	ACGT	1 cut(s)	786
Hsp92I	GRCGYC	1 cut(s)	471
Hsp92II	CATG	9 cut(s)	58, 283, 295, 572, 679, 739, 811, 1139, 1198
HspAI	GCGC	4 cut(s)	222, 471, 1048, 1270
KasI	GGCGCC	1 cut(s)	470
KroI	GCCGGC	1 cut(s)	1198
KroNI	GCCGGC	1 cut(s)	1200
Ksp22I	TGATCA	1 cut(s)	1185
KspI	CCGCGG	1 cut(s)	1057
Kzo9I	GATC	3 cut(s)	1063, 1185, 1377
LguI	GCTCTTC	1 cut(s)	1121
LmnI	GCTCC	5 cut(s)	78, 283, 740, 1044, 1344
Lsp1109I	GCAGC	9 cut(s)	559, 604, 679, 694, 808, 836, 839, 860, 880
LweI	GCATC	1 cut(s)	1011
MaeI	CTAG	4 cut(s)	191, 465, 546, 1381
MaeII	ACGT	1 cut(s)	786
MaeIII	GTNAC	4 cut(s)	294, 932, 941, 1244
MalI	GATC	3 cut(s)	1065, 1187, 1379
MbiI	CCGCTC	2 cut(s)	72, 748
MboI	GATC	3 cut(s)	1063, 1185, 1377
MboII	GAAGA	8 cut(s)	249, 541, 544, 679, 998, 1058, 1132, 1138
MflI	RGATCY	1 cut(s)	1377
MhlI	GDGCHC	5 cut(s)	54, 553, 1041, 1239, 1257
MlsI	TGGCCA	1 cut(s)	126
MluCI	AATT	4 cut(s)	446, 949, 991, 1016
MluNI	TGGCCA	1 cut(s)	126
Mly113I	GGCGCC	1 cut(s)	471
MlyI	GAGTC	2 cut(s)	34, 1315
MmeI	TCCRAC	1 cut(s)	978
Mox20I	TGGCCA	1 cut(s)	126
MroNI	GCCGGC	1 cut(s)	1198
MscI	TGGCCA	1 cut(s)	126
MseI	TTAA	4 cut(s)	368, 411, 513, 815
MslI	CAYNNNNRTG	2 cut(s)	345, 680
Msp20I	TGGCCA	1 cut(s)	126
MspA1I	CMGCKG	1 cut(s)	1056
MspCI	CTTAAG	1 cut(s)	512
MspI	CCGG	9 cut(s)	8, 35, 204, 327, 790, 1199, 1209, 1240, 1294
MspR9I	CCNGG	4 cut(s)	8, 123, 205, 1209
Mva1269I	GAATGC	1 cut(s)	562
MvaI	CCWGG	1 cut(s)	123
MvnI	CGCG	4 cut(s)	48, 843, 1056, 1272
NaeI	GCCGGC	1 cut(s)	1200
NarI	GGCGCC	1 cut(s)	471
NciI	CCSGG	3 cut(s)	8, 205, 1209
NcoI	CCATGG	2 cut(s)	54, 735
NdeI	CATATG	1 cut(s)	660
NdeII	GATC	3 cut(s)	1063, 1185, 1377
NgoMIV	GCCGGC	1 cut(s)	1198
NlaIII	CATG	9 cut(s)	58, 283, 295, 572, 679, 739, 811, 1139, 1198
NlaIV	GGNNCC	8 cut(s)	6, 114, 184, 364, 472, 1147, 1298, 1340
NmeAIII	GCCGAG	1 cut(s)	978
NmuCI	GTSAC	1 cut(s)	294
NspI	RCATGY	2 cut(s)	1139, 1198
OliI	CACNNNNGTG	1 cut(s)	345
PaeR7I	CTCGAG	1 cut(s)	1223
PagI	TCATGA	1 cut(s)	807
PaqCI	CACCTGC	1 cut(s)	495
PciSI	GCTCTTC	1 cut(s)	1121
PcsI	WCGNNNNNNNCGW	1 cut(s)	1230
PctI	GAATGC	1 cut(s)	562
PdiI	GCCGGC	1 cut(s)	1200
PflMI	CCANNNNNTGG	2 cut(s)	122, 718
PleI	GAGTC	2 cut(s)	34, 1315
PluTI	GGCGCC	1 cut(s)	474
PpsI	GAGTC	2 cut(s)	34, 1315
PpuMI	RGGWCCY	1 cut(s)	196
Psp124BI	GAGCTC	1 cut(s)	1041
Psp5II	RGGWCCY	1 cut(s)	196
Psp6I	CCWGG	1 cut(s)	121
PspFI	CCCAGC	2 cut(s)	587, 1142
PspGI	CCWGG	1 cut(s)	121
PspN4I	GGNNCC	8 cut(s)	6, 114, 184, 364, 472, 1147, 1298, 1340
PspPI	GGNCC	7 cut(s)	4, 112, 182, 196, 350, 1146, 1206
PspPPI	RGGWCCY	1 cut(s)	196
PspXI	VCTCGAGB	1 cut(s)	1223
PstI	CTGCAG	3 cut(s)	826, 898, 1010
PsuI	RGATCY	1 cut(s)	1377
RsaI	GTAC	2 cut(s)	12, 1310
RsaNI	GTAC	2 cut(s)	11, 1309
RseI	CAYNNNNRTG	2 cut(s)	345, 680
SacI	GAGCTC	1 cut(s)	1041
SacII	CCGCGG	1 cut(s)	1057
SapI	GCTCTTC	1 cut(s)	1121
SaqAI	TTAA	4 cut(s)	368, 411, 513, 815
Sau3AI	GATC	3 cut(s)	1063, 1185, 1377
Sau96I	GGNCC	7 cut(s)	4, 112, 182, 196, 350, 1146, 1206
SchI	GAGTC	2 cut(s)	34, 1315
ScrFI	CCNGG	4 cut(s)	8, 123, 205, 1209
SduI	GDGCHC	5 cut(s)	54, 553, 1041, 1239, 1257
SfaNI	GCATC	1 cut(s)	1011
SfcI	CTRYAG	3 cut(s)	822, 894, 1006
SfoI	GGCGCC	1 cut(s)	472
Sfr274I	CTCGAG	1 cut(s)	1223
Sfr303I	CCGCGG	1 cut(s)	1057
SgrAI	CRCCGGYG	1 cut(s)	1239
SgrBI	CCGCGG	1 cut(s)	1057
SinI	GGWCC	5 cut(s)	4, 182, 196, 350, 1146
SlaI	CTCGAG	1 cut(s)	1223
SmiMI	CAYNNNNRTG	2 cut(s)	345, 680
SmlI	CTYRAG	4 cut(s)	512, 1043, 1223, 1256
SmoI	CTYRAG	4 cut(s)	512, 1043, 1223, 1256
Sse9I	AATT	4 cut(s)	446, 949, 991, 1016
SspDI	GGCGCC	1 cut(s)	470
SspMI	CTAG	4 cut(s)	191, 465, 546, 1381
SstI	GAGCTC	1 cut(s)	1041
StyD4I	CCNGG	4 cut(s)	6, 121, 203, 1207
StyI	CCWWGG	3 cut(s)	54, 108, 735
TaaI	ACNGT	7 cut(s)	300, 362, 499, 766, 947, 959, 1264
TaiI	ACGT	1 cut(s)	789
TaqI	TCGA	5 cut(s)	93, 402, 1099, 1224, 1334
TasI	AATT	4 cut(s)	446, 949, 991, 1016
TauI	GCSGC	7 cut(s)	20, 458, 611, 623, 632, 728, 1215
Tru1I	TTAA	4 cut(s)	368, 411, 513, 815
Tru9I	TTAA	4 cut(s)	368, 411, 513, 815
TscAI	CASTG	4 cut(s)	352, 631, 719, 973
TseFI	GTSAC	1 cut(s)	294
TseI	GCWGC	9 cut(s)	572, 617, 692, 707, 821, 824, 827, 848, 893
Tsp45I	GTSAC	1 cut(s)	294
TspDTI	ATGAA	3 cut(s)	557, 1058, 1139
TspGWI	ACGGA	1 cut(s)	951
TspRI	CASTG	4 cut(s)	352, 631, 719, 973
Van91I	CCANNNNNTGG	2 cut(s)	122, 718
Vha464I	CTTAAG	1 cut(s)	512
VpaK11BI	GGWCC	5 cut(s)	4, 182, 196, 350, 1146
XapI	RAATTY	1 cut(s)	991
XceI	RCATGY	2 cut(s)	1139, 1198
XhoI	CTCGAG	1 cut(s)	1223
XspI	CTAG	4 cut(s)	191, 465, 546, 1381

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.