Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0004295

Physical Location & Seq

Genomic Coordinates Forward (+)

17924268 .. 17927991

Gene Structure 3724 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1198700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1380 bp

ATGGACCCGGTTCAGGCCGCCGTGTTCCGGCCACCGGAAACTCCTTGCGAGCCCATGGAGTTCCTCTCTCGCTCTTGGAGCGTGTCGGCTCTCGAAGTCTCCAAAGCCTTAGCCCCACCCCCTGGCCAGACCCAACTCACAAACCTCAACCTCAGCTCTGCCGTCAATGGCGGCGGCAGCGGTCCCATTCCAGAGGACCTGGCCGGAGAGCTAGACGAGAGCGCCACATTTTCGGGCAACCCATTTTCCTTTGCTTGTTCCGAGACCTCTCAGCTCGTCATGGAGCGGATCATGTCACAGTCGCAAGAGGTGTCTCCACGAACTTCCGGCAGGCTCTCCCACAGCAGTGGTCCTCTCAACGGTTCCTTAACTGACAGCCCACCTGTCTCCCCCACCGAAGACGATGTTAAGTACGGCCGCTCTACCAACCACAACAACACCCAATTCAGAGCCGCCACTCCTAGCGGCGCCCCTGTGTCTGGCGGTGGCAAGACGGTGGGCAGGTGGCTTAAGGACAGGAGGGAGAAGAAGAAAGAGGAGGCTAGAGCCCTGAATGCTCAGCTTCATGCTGCTGTTTCTGTTGCTGGGGTGGCTTCTTCCATCGCCGCCATTGCTGCCGCCACTGCTGCCTCATCTGGATCGGGAAAAGATGAGCATATGGCGAAGACTGACATGGCTGTGGCCTCTGCTGCCACATTGGTAGCTGCACAGTGTGTGGAGGCGGCTGAGGCCATGGGAGCTGAGCGGGAGCACCTTGCTACGGTTGTCAGCTCTGCTGTGAATGTCCGGTCGGCAGGCGATATCATGACCTTAACTGCTGCAGCAGCAACAGCCTTACGCGGTGCAGCGACACTAAGGGCGAGGGCGTTGAAGGAAGTGTGGAATATTGCCGCAGTTATTCCTGTTGAGAAAGGCTCAGGAGTAGCTGGTAATGGTAGCAACGGGAATTCCAACAGTAGTTTGAGTGGAGAACTTGTTCCTGAAGAGAATTTTCTCGGCATCTGCAGCAGGGAGTTGCTTGCTAAGGGTTGTGAGCTCCTCAAGCGCACCCGCAAAGGTGATCTTCATTGGAAAATCGTCTCTGTTTACATCCATCGAACGGGTCAGGTTATGCTGAAGATGAAGAGCAGGCACGTTGCTGGGACCATAACCAAAAAGAAAAAGAATGTGGTGCTGGAGGTGATCAAGGACATGCCGGCTTGGCCCGGCCGCCACCTGCTCGAGGGCGGAGAGCACCGGCGTTACTTTGGGCTCAAGACTGTTATGCGCGGAGTTGTGGAGTTCGAGTGCCGGAACCAGAGGGAGTACGACATTTGGACGCTGGGCGTGTCGAGGCTCCTCAGCATTGTTGCAGAGAGGCACAATAGACATGGCATCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Auxin_canalis PH_2

Protein Analysis

460

Amino Acids

48.69

Weight (kDa)

9.06

Isoelectric Point (pI)

39.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Auxin_canalis	PF05703	12 - 305	3e-113	Auxin canalisation
PH_2	PF08458	345 - 450	1.1e-42	Plant pleckstrin homology-like region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004295)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G22810 AT3G22810 AT3G22810 AT4G14740 AT4G14740 AT4G14740 AT4G14740 AT5G43870 AT5G43870
fragaria_vesca	FvH4_4g01030 FvH4_4g01030 FvH4_4g01030 FvH4_4g01030
malus_domestica	MD13G1198600.v1.1 MD16G1198700.v1.1
prunus_persica	Prupe.1G020300_v2.0.a1 Prupe.1G020300_v2.0.a1
pyrus_communis	pycom13g17240 pycom16g16750
rosa_chinensis	RchiOBHm_Chr4g0387611
rosa_laevigata	RLG00000010107
rosa_multiflora	Rmu_sc0003953.1_g000004 Rmu_sc0012183.1_g000002
rosa_roxburghii	Rroxscaffold_5G00334290
rosa_rugosa	Rorug03G0311200 Rorug03G0311300 Rorug03G0311400
rosa_samantha	Rh4AG017100 Rh4BG011900 Rh4CG018300 Rh4DG012900
rosa_wichuraiana	Rw4G001090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	492, 1224
Acc36I	ACCTGC	2 cut(s)	492, 1224
AccB1I	GGYRCC	1 cut(s)	467
AccB7I	CCANNNNNTGG	1 cut(s)	122
AccBSI	CCGCTC	3 cut(s)	286, 420, 745
AccII	CGCG	2 cut(s)	840, 1269
AclWI	GGATC	2 cut(s)	296, 646
AcoI	YGGCCR	5 cut(s)	29, 124, 201, 415, 1207
AcsI	RAATTY	2 cut(s)	946, 988
AcuI	CTGAAG	2 cut(s)	1002, 1136
AcyI	GRCGYC	1 cut(s)	468
AdeI	CACNNNGTG	1 cut(s)	713
AfaI	GTAC	2 cut(s)	413, 1307
AfiI	CCNNNNNNNGG	9 cut(s)	13, 27, 34, 122, 359, 479, 760, 1099, 1222
AflII	CTTAAG	1 cut(s)	509
AgsI	TTSAA	1 cut(s)	871
AjnI	CCWGG	2 cut(s)	121, 198
AleI	CACNNNNGTG	1 cut(s)	345
AloI	GAACNNNNNNTCC	2 cut(s)	960, 992
AluBI	AGCT	9 cut(s)	156, 211, 274, 562, 704, 740, 771, 926, 1036
AluI	AGCT	9 cut(s)	156, 211, 274, 562, 704, 740, 771, 926, 1036
Alw21I	GWGCWC	3 cut(s)	753, 1038, 1236
Alw26I	GTCTC	5 cut(s)	103, 257, 318, 391, 1084
AlwI	GGATC	2 cut(s)	296, 646
Ama87I	CYCGRG	1 cut(s)	1220
AoxI	GGCC	9 cut(s)	15, 29, 124, 201, 415, 681, 729, 1202, 1207
ApoI	RAATTY	2 cut(s)	946, 988
Asp700I	GAANNNNTTC	1 cut(s)	975
AspLEI	GCGC	4 cut(s)	224, 470, 1047, 1269
AspS9I	GGNCC	6 cut(s)	4, 182, 196, 350, 1143, 1203
AsuC2I	CCSGG	2 cut(s)	8, 1206
AsuHPI	GGTGA	2 cut(s)	1070, 1192
AvaI	CYCGRG	1 cut(s)	1220
AvaII	GGWCC	5 cut(s)	4, 182, 196, 350, 1143
BalI	TGGCCA	1 cut(s)	126
BanI	GGYRCC	1 cut(s)	467
BanII	GRGCYC	4 cut(s)	54, 550, 1038, 1254
BbsI	GAAGAC	2 cut(s)	405, 671
Bbv12I	GWGCWC	3 cut(s)	753, 1038, 1236
BbvCI	CCTCAGC	3 cut(s)	152, 726, 1340
BccI	CCATC	2 cut(s)	608, 1101
BceAI	ACGGC	3 cut(s)	5, 146, 430
BciT130I	CCWGG	2 cut(s)	123, 200
BclI	TGATCA	1 cut(s)	1182
BcnI	CCSGG	2 cut(s)	8, 1206
BcoDI	GTCTC	5 cut(s)	103, 257, 318, 391, 1084
BfaI	CTAG	4 cut(s)	212, 462, 543, 1378
BfmI	CTRYAG	2 cut(s)	819, 1003
BfoI	RGCGCY	2 cut(s)	225, 471
BfrI	CTTAAG	1 cut(s)	509
BfuAI	ACCTGC	2 cut(s)	492, 1224
BglI	GCCNNNNNGGC	1 cut(s)	1201
BlpI	GCTNAGC	2 cut(s)	558, 741
Bme1390I	CCNGG	4 cut(s)	8, 123, 200, 1206
Bme18I	GGWCC	5 cut(s)	4, 182, 196, 350, 1143
BmeT110I	CYCGRG	1 cut(s)	1220
BmgT120I	GGNCC	6 cut(s)	4, 182, 196, 350, 1143, 1203
BmiI	GGNNCC	7 cut(s)	6, 184, 364, 469, 1144, 1295, 1337
BmrFI	CCNGG	4 cut(s)	8, 123, 200, 1206
BmsI	GCATC	1 cut(s)	1008
BpiI	GAAGAC	2 cut(s)	405, 671
BplI	GAGNNNNNCTC	4 cut(s)	50, 82, 899, 931
BpmI	CTGGAG	1 cut(s)	1196
Bpu10I	CCTNAGC	6 cut(s)	109, 152, 726, 916, 1023, 1340
Bpu1102I	GCTNAGC	2 cut(s)	558, 741
BpuEI	CTTGAG	2 cut(s)	1025, 1238
BpuMI	CCSGG	2 cut(s)	8, 1206
BsaHI	GRCGYC	1 cut(s)	468
BsaI	GGTCTC	1 cut(s)	257
BsaJI	CCNNGG	3 cut(s)	54, 121, 732
BsaWI	WCCGGW	2 cut(s)	34, 786
BsaXI	ACNNNNNCTCC	4 cut(s)	960, 990, 1271, 1301
Bsc4I	CCNNNNNNNGG	9 cut(s)	13, 27, 34, 122, 359, 479, 760, 1099, 1222
Bse118I	RCCGGY	2 cut(s)	1195, 1236
Bse3DI	GCAATG	1 cut(s)	609
BseBI	CCWGG	2 cut(s)	123, 200
BseDI	CCNNGG	3 cut(s)	54, 121, 732
BseGI	GGATG	1 cut(s)	1089
BseLI	CCNNNNNNNGG	9 cut(s)	13, 27, 34, 122, 359, 479, 760, 1099, 1222
BseMI	GCAATG	1 cut(s)	609
BseMII	CTCAG	7 cut(s)	166, 284, 572, 717, 732, 930, 1354
BseRI	GAGGAG	3 cut(s)	551, 1028, 1328
BseX3I	CGGCCG	2 cut(s)	415, 1207
BseYI	CCCAGC	3 cut(s)	584, 1139, 1321
BsgI	GTGCAG	2 cut(s)	690, 864
Bsh1236I	CGCG	2 cut(s)	840, 1269
Bsh1285I	CGRYCG	3 cut(s)	418, 791, 1210
BshFI	GGCC	9 cut(s)	17, 31, 126, 203, 417, 683, 731, 1204, 1209
BshNI	GGYRCC	1 cut(s)	467
BsiEI	CGRYCG	3 cut(s)	418, 791, 1210
BsiHKAI	GWGCWC	3 cut(s)	753, 1038, 1236
BsiHKCI	CYCGRG	1 cut(s)	1220
BslFI	GGGAC	2 cut(s)	168, 1156
BslI	CCNNNNNNNGG	9 cut(s)	13, 27, 34, 122, 359, 479, 760, 1099, 1222
BsmAI	GTCTC	5 cut(s)	103, 257, 318, 391, 1084
BsmBI	CGTCTC	1 cut(s)	1084
BsmFI	GGGAC	2 cut(s)	168, 1156
BsmI	GAATGC	1 cut(s)	559
BsnI	GGCC	9 cut(s)	17, 31, 126, 203, 417, 683, 731, 1204, 1209
Bso31I	GGTCTC	1 cut(s)	257
BsoBI	CYCGRG	1 cut(s)	1220
Bsp1286I	GDGCHC	6 cut(s)	54, 550, 753, 1038, 1236, 1254
Bsp143I	GATC	4 cut(s)	288, 638, 1060, 1182
Bsp1720I	GCTNAGC	2 cut(s)	558, 741
Bsp19I	CCATGG	2 cut(s)	54, 732
BspANI	GGCC	9 cut(s)	17, 31, 126, 203, 417, 683, 731, 1204, 1209
BspCNI	CTCAG	7 cut(s)	165, 283, 571, 718, 733, 929, 1353
BspFNI	CGCG	2 cut(s)	840, 1269
BspHI	TCATGA	1 cut(s)	804
BspLI	GGNNCC	7 cut(s)	6, 184, 364, 469, 1144, 1295, 1337
BspMAI	CTGCAG	2 cut(s)	823, 1007
BspMI	ACCTGC	2 cut(s)	492, 1224
BspPI	GGATC	2 cut(s)	296, 646
BspQI	GCTCTTC	1 cut(s)	1118
BspT107I	GGYRCC	1 cut(s)	467
BspTI	CTTAAG	1 cut(s)	509
BspTNI	GGTCTC	1 cut(s)	257
BsrBI	CCGCTC	3 cut(s)	286, 420, 745
BsrDI	GCAATG	1 cut(s)	609
BsrFI	RCCGGY	2 cut(s)	1195, 1236
BssAI	RCCGGY	2 cut(s)	1195, 1236
BssECI	CCNNGG	3 cut(s)	54, 121, 732
BssMI	GATC	4 cut(s)	288, 638, 1060, 1182
BssNI	GRCGYC	1 cut(s)	468
BssT1I	CCWWGG	2 cut(s)	54, 732
Bst2UI	CCWGG	2 cut(s)	123, 200
Bst4CI	ACNGT	7 cut(s)	300, 362, 496, 711, 763, 956, 1261
Bst6I	CTCTTC	2 cut(s)	978, 1118
BstACI	GRCGYC	1 cut(s)	468
BstAFI	CTTAAG	1 cut(s)	509
BstC8I	GCNNGC	6 cut(s)	50, 332, 796, 1020, 1130, 1197
BstDSI	CCRYGG	2 cut(s)	54, 732
BstENI	CCTNNNNNAGG	1 cut(s)	1220
BstF5I	GGATG	1 cut(s)	1089
BstFNI	CGCG	2 cut(s)	840, 1269
BstH2I	RGCGCY	2 cut(s)	225, 471
BstHHI	GCGC	4 cut(s)	224, 470, 1047, 1269
BstKTI	GATC	4 cut(s)	291, 641, 1063, 1185
BstMAI	GTCTC	5 cut(s)	103, 257, 318, 391, 1084
BstMBI	GATC	4 cut(s)	288, 638, 1060, 1182
BstMCI	CGRYCG	3 cut(s)	418, 791, 1210
BstNI	CCWGG	2 cut(s)	123, 200
BstNSI	RCATGY	1 cut(s)	1195
BstSCI	CCNGG	4 cut(s)	6, 121, 198, 1204
BstSFI	CTRYAG	2 cut(s)	819, 1003
BstUI	CGCG	2 cut(s)	840, 1269
BstV2I	GAAGAC	2 cut(s)	405, 671
BstXI	CCANNNNNNTGG	1 cut(s)	347
BstZI	CGGCCG	2 cut(s)	415, 1207
BsuRI	GGCC	9 cut(s)	17, 31, 126, 203, 417, 683, 731, 1204, 1209
BtgI	CCRYGG	2 cut(s)	54, 732
BtgZI	GCGATG	1 cut(s)	586
BtsCI	GGATG	1 cut(s)	1089
BtsI	GCAGTG	2 cut(s)	352, 621
BtsIMutI	CAGTG	3 cut(s)	352, 621, 716
BveI	ACCTGC	2 cut(s)	492, 1224
Cac8I	GCNNGC	6 cut(s)	50, 332, 796, 1020, 1130, 1197
CciI	TCATGA	1 cut(s)	804
CfoI	GCGC	4 cut(s)	224, 470, 1047, 1269
Cfr10I	RCCGGY	2 cut(s)	1195, 1236
Cfr13I	GGNCC	6 cut(s)	4, 182, 196, 350, 1143, 1203
CseI	GACGC	1 cut(s)	1327
Csp6I	GTAC	2 cut(s)	412, 1306
CviAII	CATG	9 cut(s)	55, 280, 292, 566, 673, 733, 805, 1192, 1370
CviQI	GTAC	2 cut(s)	412, 1306
DinI	GGCGCC	1 cut(s)	469
DpnI	GATC	4 cut(s)	290, 640, 1062, 1184
DpnII	GATC	4 cut(s)	288, 638, 1060, 1182
DraIII	CACNNNGTG	1 cut(s)	713
EaeI	YGGCCR	5 cut(s)	29, 124, 201, 415, 1207
EagI	CGGCCG	2 cut(s)	415, 1207
Eam1104I	CTCTTC	2 cut(s)	978, 1118
EarI	CTCTTC	2 cut(s)	978, 1118
EciI	GGCGGA	1 cut(s)	1242
Ecl136II	GAGCTC	1 cut(s)	1036
EclXI	CGGCCG	2 cut(s)	415, 1207
Eco130I	CCWWGG	2 cut(s)	54, 732
Eco24I	GRGCYC	4 cut(s)	54, 550, 1038, 1254
Eco31I	GGTCTC	1 cut(s)	257
Eco32I	GATATC	1 cut(s)	802
Eco47I	GGWCC	5 cut(s)	4, 182, 196, 350, 1143
Eco52I	CGGCCG	2 cut(s)	415, 1207
Eco53kI	GAGCTC	1 cut(s)	1036
Eco57I	CTGAAG	2 cut(s)	1002, 1136
Eco88I	CYCGRG	1 cut(s)	1220
EcoICRI	GAGCTC	1 cut(s)	1036
EcoNI	CCTNNNNNAGG	1 cut(s)	1220
EcoO109I	RGGNCCY	1 cut(s)	196
EcoRI	GAATTC	1 cut(s)	946
EcoRII	CCWGG	2 cut(s)	121, 198
EcoRV	GATATC	1 cut(s)	802
EcoT14I	CCWWGG	2 cut(s)	54, 732
EcoT38I	GRGCYC	4 cut(s)	54, 550, 1038, 1254
EgeI	GGCGCC	1 cut(s)	469
EheI	GGCGCC	1 cut(s)	469
ErhI	CCWWGG	2 cut(s)	54, 732
Esp3I	CGTCTC	1 cut(s)	1084
FaeI	CATG	9 cut(s)	58, 283, 295, 569, 676, 736, 808, 1195, 1373
FalI	AAGNNNNNCTT	2 cut(s)	1047, 1079
FaqI	GGGAC	2 cut(s)	168, 1156
FatI	CATG	9 cut(s)	54, 279, 291, 565, 672, 732, 804, 1191, 1369
FauI	CCCGC	2 cut(s)	738, 1058
FauNDI	CATATG	1 cut(s)	657
FbaI	TGATCA	1 cut(s)	1182
FokI	GGATG	1 cut(s)	1076
FriOI	GRGCYC	4 cut(s)	54, 550, 1038, 1254
FspBI	CTAG	4 cut(s)	212, 462, 543, 1378
GlaI	GCGC	4 cut(s)	223, 469, 1046, 1268
GsaI	CCCAGC	3 cut(s)	588, 1143, 1325
GsuI	CTGGAG	1 cut(s)	1196
HaeII	RGCGCY	2 cut(s)	225, 471
HaeIII	GGCC	9 cut(s)	17, 31, 126, 203, 417, 683, 731, 1204, 1209
HgaI	GACGC	1 cut(s)	1327
HhaI	GCGC	4 cut(s)	224, 470, 1047, 1269
Hin1I	GRCGYC	1 cut(s)	468
Hin1II	CATG	9 cut(s)	58, 283, 295, 569, 676, 736, 808, 1195, 1373
Hin6I	GCGC	4 cut(s)	222, 468, 1045, 1267
HinP1I	GCGC	4 cut(s)	222, 468, 1045, 1267
HphI	GGTGA	2 cut(s)	1070, 1192
Hpy166II	GTNNAC	1 cut(s)	1087
Hpy188I	TCNGA	2 cut(s)	262, 449
Hpy188III	TCNNGA	8 cut(s)	92, 191, 636, 642, 805, 918, 980, 1255
Hpy8I	GTNNAC	1 cut(s)	1087
HpyAV	CCTTC	1 cut(s)	865
HpyCH4III	ACNGT	7 cut(s)	300, 362, 496, 711, 763, 956, 1261
HpyCH4IV	ACGT	1 cut(s)	1134
HpyCH4V	TGCA	5 cut(s)	707, 821, 845, 1005, 1352
HpySE526I	ACGT	1 cut(s)	1134
Hsp92I	GRCGYC	1 cut(s)	468
Hsp92II	CATG	9 cut(s)	58, 283, 295, 569, 676, 736, 808, 1195, 1373
HspAI	GCGC	4 cut(s)	222, 468, 1045, 1267
KasI	GGCGCC	1 cut(s)	467
KroI	GCCGGC	1 cut(s)	1195
KroNI	GCCGGC	1 cut(s)	1197
Ksp22I	TGATCA	1 cut(s)	1182
Kzo9I	GATC	4 cut(s)	288, 638, 1060, 1182
LguI	GCTCTTC	1 cut(s)	1118
LmnI	GCTCC	6 cut(s)	78, 283, 737, 748, 1041, 1341
LweI	GCATC	1 cut(s)	1008
MaeI	CTAG	4 cut(s)	212, 462, 543, 1378
MaeII	ACGT	1 cut(s)	1134
MaeIII	GTNAC	2 cut(s)	294, 1241
MalI	GATC	4 cut(s)	290, 640, 1062, 1184
MbiI	CCGCTC	3 cut(s)	286, 420, 745
MboI	GATC	4 cut(s)	288, 638, 1060, 1182
MboII	GAAGA	9 cut(s)	410, 538, 541, 588, 676, 995, 1055, 1129, 1135
MhlI	GDGCHC	6 cut(s)	54, 550, 753, 1038, 1236, 1254
MlsI	TGGCCA	1 cut(s)	126
MluCI	AATT	3 cut(s)	443, 946, 988
MluNI	TGGCCA	1 cut(s)	126
Mly113I	GGCGCC	1 cut(s)	468
MmeI	TCCRAC	1 cut(s)	975
Mox20I	TGGCCA	1 cut(s)	126
MroNI	GCCGGC	1 cut(s)	1195
MroXI	GAANNNNTTC	1 cut(s)	975
MscI	TGGCCA	1 cut(s)	126
MseI	TTAA	4 cut(s)	368, 408, 510, 812
MslI	CAYNNNNRTG	2 cut(s)	345, 677
Msp20I	TGGCCA	1 cut(s)	126
MspA1I	CMGCKG	1 cut(s)	180
MspCI	CTTAAG	1 cut(s)	509
MspR9I	CCNGG	4 cut(s)	8, 123, 200, 1206
Mva1269I	GAATGC	1 cut(s)	559
MvaI	CCWGG	2 cut(s)	123, 200
MvnI	CGCG	2 cut(s)	840, 1269
NaeI	GCCGGC	1 cut(s)	1197
NarI	GGCGCC	1 cut(s)	468
NciI	CCSGG	2 cut(s)	8, 1206
NcoI	CCATGG	2 cut(s)	54, 732
NdeI	CATATG	1 cut(s)	657
NdeII	GATC	4 cut(s)	288, 638, 1060, 1182
NgoMIV	GCCGGC	1 cut(s)	1195
NlaIII	CATG	9 cut(s)	58, 283, 295, 569, 676, 736, 808, 1195, 1373
NlaIV	GGNNCC	7 cut(s)	6, 184, 364, 469, 1144, 1295, 1337
NmeAIII	GCCGAG	1 cut(s)	975
NmuCI	GTSAC	1 cut(s)	294
NspI	RCATGY	1 cut(s)	1195
OliI	CACNNNNGTG	1 cut(s)	345
PaeR7I	CTCGAG	1 cut(s)	1220
PagI	TCATGA	1 cut(s)	804
PaqCI	CACCTGC	2 cut(s)	492, 1224
PciSI	GCTCTTC	1 cut(s)	1118
PctI	GAATGC	1 cut(s)	559
PdiI	GCCGGC	1 cut(s)	1197
PdmI	GAANNNNTTC	1 cut(s)	975
PflMI	CCANNNNNTGG	1 cut(s)	122
PluTI	GGCGCC	1 cut(s)	471
PpuMI	RGGWCCY	1 cut(s)	196
Psp124BI	GAGCTC	1 cut(s)	1038
Psp5II	RGGWCCY	1 cut(s)	196
Psp6I	CCWGG	2 cut(s)	121, 198
PspFI	CCCAGC	3 cut(s)	584, 1139, 1321
PspGI	CCWGG	2 cut(s)	121, 198
PspN4I	GGNNCC	7 cut(s)	6, 184, 364, 469, 1144, 1295, 1337
PspPI	GGNCC	6 cut(s)	4, 182, 196, 350, 1143, 1203
PspPPI	RGGWCCY	1 cut(s)	196
PspXI	VCTCGAGB	1 cut(s)	1220
PstI	CTGCAG	2 cut(s)	823, 1007
RsaI	GTAC	2 cut(s)	413, 1307
RsaNI	GTAC	2 cut(s)	412, 1306
RseI	CAYNNNNRTG	2 cut(s)	345, 677
SacI	GAGCTC	1 cut(s)	1038
SapI	GCTCTTC	1 cut(s)	1118
SaqAI	TTAA	4 cut(s)	368, 408, 510, 812
Sau3AI	GATC	4 cut(s)	288, 638, 1060, 1182
Sau96I	GGNCC	6 cut(s)	4, 182, 196, 350, 1143, 1203
ScrFI	CCNGG	4 cut(s)	8, 123, 200, 1206
SduI	GDGCHC	6 cut(s)	54, 550, 753, 1038, 1236, 1254
SfaNI	GCATC	1 cut(s)	1008
SfcI	CTRYAG	2 cut(s)	819, 1003
SfoI	GGCGCC	1 cut(s)	469
Sfr274I	CTCGAG	1 cut(s)	1220
SgrAI	CRCCGGYG	1 cut(s)	1236
SinI	GGWCC	5 cut(s)	4, 182, 196, 350, 1143
SlaI	CTCGAG	1 cut(s)	1220
SmiMI	CAYNNNNRTG	2 cut(s)	345, 677
SmlI	CTYRAG	4 cut(s)	509, 1040, 1220, 1253
SmoI	CTYRAG	4 cut(s)	509, 1040, 1220, 1253
Sse9I	AATT	3 cut(s)	443, 946, 988
SspDI	GGCGCC	1 cut(s)	467
SspI	AATATT	1 cut(s)	886
SspMI	CTAG	4 cut(s)	212, 462, 543, 1378
SstI	GAGCTC	1 cut(s)	1038
StyD4I	CCNGG	4 cut(s)	6, 121, 198, 1204
StyI	CCWWGG	2 cut(s)	54, 732
TaaI	ACNGT	7 cut(s)	300, 362, 496, 711, 763, 956, 1261
TaiI	ACGT	1 cut(s)	1137
TaqI	TCGA	5 cut(s)	93, 1096, 1221, 1284, 1331
TasI	AATT	3 cut(s)	443, 946, 988
Tru1I	TTAA	4 cut(s)	368, 408, 510, 812
Tru9I	TTAA	4 cut(s)	368, 408, 510, 812
TscAI	CASTG	3 cut(s)	352, 628, 716
TseFI	GTSAC	1 cut(s)	294
Tsp45I	GTSAC	1 cut(s)	294
TspDTI	ATGAA	3 cut(s)	554, 1055, 1136
TspRI	CASTG	3 cut(s)	352, 628, 716
Van91I	CCANNNNNTGG	1 cut(s)	122
Vha464I	CTTAAG	1 cut(s)	509
VpaK11BI	GGWCC	5 cut(s)	4, 182, 196, 350, 1143
XagI	CCTNNNNNAGG	1 cut(s)	1220
XapI	RAATTY	2 cut(s)	946, 988
XceI	RCATGY	1 cut(s)	1195
XhoI	CTCGAG	1 cut(s)	1220
XmnI	GAANNNNTTC	1 cut(s)	975
XspI	CTAG	4 cut(s)	212, 462, 543, 1378

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.