Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0014443

Physical Location & Seq

Genomic Coordinates Forward (+)

17814244 .. 17816789

Gene Structure 2546 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G44230.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1974 bp

ATGACGGTGGCTCATTCTCACCGGTTCTCGACGGCGGTAAACCCCATTAACATTAGCTTGCTTTCAAAACAATTACTTCAGCTTGGAAGAACAAGTAACAATTCCGGTACCTTCTCAGAGATCAGTAATCAAAAAGAACTTCTAGTGTCTTCACTCATCTCAAAGCTCGATGATTGCATCAATCTCAATCAAATCAAGCAAATTCATGGCCATGTTCTCCGTAAAGGTCTCGATCAAAGCTGTTACATTCTCACGAAGCTAATTCGCACGTTAACGAAGCTCGGTGTTCCAATGGATCCATACGCTCGCCGTGTAATCGAGCCTGTTCAATTCCGGAACCCGTTTCTATGGACCGCAGTGATTCGTGGGTATGCGATAGAAGGTAAATTTGATGAAGCTATTGCTATGTATGGATGTATGAGGAAAGAAGAGATTACGCCTGTTTCTTTCACTTTCTCTGCTCTTTTGAAAGCTTGTGGAACAATGAAAGATTTGAATTTGGGTCGTCAGTTTCATGCACAGACGTTTAGACTTAGAGGGTTTTGTTTTGTATACGTTGGGAATACAATGATTGATATGTATGTGAAATGTGAATCTATTGATTGTGCGCGTAAGGTGTTTGATGAAATGCCTGAACGAGATGTGATATCGTGGACTGAGCTTATTGCTGCGTATGCGAGAGTTGGAAATATGGAATGTGCAGCGGAACTGTTTGAAAGTTTGCCTACGAAGGATATGGTGGCTTGGACTGCTATGGTTACGGGATTTGCGCAGAATGCTAAACCTCAGGAAGCTTTAGAGTATTTTGATAGGATGGAGAAATCGGGAATTCGAGCTGATGAGGTTACTGTCGCCGGATATATATCGGCTTGTGCGCAGCTTGGAGCAAGTAAATACGCTGATCGGGCTGTTCAAATTGCTCAGAAATCTGGGTATTCTCCTAGTGATCACGTTGTTATCGGGTCTGCTTTGATAGATATGTACTCGAAATGTGGAAACGTAGAAGAGGCAGTTAATGTGTTTATGTCGATGAACAACAAAAACGTTTTCACTTATAGTTCGATGATCCTAGGTCTTGCTACGCACGGGCGTGCTCAAGAGGCTTTACATCTTTTTCATTACATGGTAACACAGACAGAGATAAAACCAAATACGGTTACATTTGTTGGTGCGCTTATGGCTTGCAGCCACTCGGGACTTGTTGACCAAGGACGTCAAGTATTTGATTCTATGTATCAAACATTTGGTGTTCAACCAACGCGGGATCACTATACTTGTATGGTCGATCTTCTTGGCCGTACAGGGCGGTTACAAGAAGCCCTTGAGCTGATTAAAACTATGTCTGTTGAGCCACACGGAGGTGTATGGGGTGCATTGCTCGGTGCCTGCAGGATTCACAACAATCCAGAGATAGCAGAGATTGCTGCAGAACATTTGTTTGAATTGGAACCGGACATTATCGGAAACTATATATTGCTCTCCAATGTCTACGCGTCAGCTGGAGACTGGGGCGGAGTTTTAAGAGTGCGGAAACTGATTAAAGAAAAGGGTTTGAAGAAGACACCCGCGGTTAGTTGGGTTGTAGATAAGAATGGTCAGATGCATAAGTTTTTCCCTGGAAACCTGAACCATCCAATGTCAAATAAGATTCAAGACAAGTTAGAAGAGCTTGTAGAAAGATTAACGGTATTAGGATATCAACCGGATTTGAGCTCTGTGCCATACGACGTGAGTGACAATGCGAAGAGGTTGATACTGATACAGCATACCGAGAAGCTAGCTTTAGCGTTCTCTTTACTCACTACGAACAGAGATTCTACGATAACAATAATGAAGAATTTGAGGATGTGCCTAGATTGTCACAAGTTTATGCGTTTGGCATCAGAGGTCACAGGGAAGGTAATTATAATGAGGGATAATATGAGATTCCACCATTTTAGGAGTGGAGATTGTTCTTGTGGTGATTTTTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

657

Amino Acids

73.67

Weight (kDa)

7.82

Isoelectric Point (pI)

39.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	17 - 62	4.9e-08	PPR repeat family
PPR_2	PF13041	148 - 195	7.1e-08	PPR repeat family
PPR	PF01535	150 - 180	1.4e-06	PPR repeat
PPR_2	PF13041	250 - 293	4.6e-07	PPR repeat family
E_motif	PF20431	369 - 430	1.2e-20	E motif
DYW_deaminase	PF14432	468 - 560	7.9e-37	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014443)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G44230 AT5G44230
fragaria_vesca	FvH4_1g12540
malus_domestica	MD15G1252800.v1.1
prunus_persica	Prupe.7G161300_v2.0.a1
pyrus_communis	pycom15g22270
rosa_chinensis	RchiOBHm_Chr2g0100491
rosa_laevigata	RLG00000016976
rosa_multiflora	Rmu_sc0000528.1_g000023 Rmu_sc0020397.1_g000001
rosa_roxburghii	Rroxscaffold_2G00142190
rosa_rugosa	Rorug02G0088600
rosa_samantha	Rh2AG138300 Rh2BG141300 Rh2CG143500 Rh2DG143100
rosa_wichuraiana	Rw2G010810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1907
AatII	GACGTC	1 cut(s)	1216
Acc16I	TGCGCA	2 cut(s)	771, 876
Acc65I	GGTACC	1 cut(s)	107
AccB1I	GGYRCC	2 cut(s)	107, 1382
AccI	GTMKAC	2 cut(s)	552, 1488
AccII	CGCG	4 cut(s)	610, 1261, 1493, 1568
AccIII	TCCGGA	1 cut(s)	333
AciI	CCGC	9 cut(s)	35, 354, 704, 1261, 1306, 1512, 1528, 1566, 1568
AclI	AACGTT	1 cut(s)	1044
AclWI	GGATC	4 cut(s)	290, 303, 1060, 1272
AcoI	YGGCCR	2 cut(s)	208, 1294
AcsI	RAATTY	5 cut(s)	201, 386, 496, 828, 1837
AcuI	CTGAAG	1 cut(s)	62
AcyI	GRCGYC	1 cut(s)	1213
AfaI	GTAC	3 cut(s)	109, 983, 1300
AfiI	CCNNNNNNNGG	1 cut(s)	1358
AflIII	ACRYGT	1 cut(s)	1491
AgeI	ACCGGT	1 cut(s)	21
AjiI	CACGTC	1 cut(s)	1729
AjnI	CCWGG	1 cut(s)	1615
AleI	CACNNNNGTG	2 cut(s)	1089, 1359
Alw21I	GWGCWC	2 cut(s)	1096, 1715
Alw26I	GTCTC	2 cut(s)	233, 1497
AlwI	GGATC	4 cut(s)	290, 303, 1060, 1272
Ama87I	CYCGRG	1 cut(s)	1192
Aor13HI	TCCGGA	1 cut(s)	333
AoxI	GGCC	2 cut(s)	208, 1294
ApeKI	GCWGC	5 cut(s)	668, 701, 877, 1185, 1424
ApoI	RAATTY	5 cut(s)	201, 386, 496, 828, 1837
AsiGI	ACCGGT	1 cut(s)	21
Asp718I	GGTACC	1 cut(s)	107
AspA2I	CCTAGG	1 cut(s)	1069
AspLEI	GCGC	4 cut(s)	610, 772, 877, 1174
AspS9I	GGNCC	1 cut(s)	351
AsuHPI	GGTGA	2 cut(s)	11, 1973
AsuNHI	GCTAGC	1 cut(s)	1777
AvaI	CYCGRG	1 cut(s)	1192
AvaII	GGWCC	1 cut(s)	351
AvrII	CCTAGG	1 cut(s)	1069
AxyI	CCTNAGG	1 cut(s)	786
BalI	TGGCCA	1 cut(s)	210
BamHI	GGATCC	1 cut(s)	295
BanI	GGYRCC	2 cut(s)	107, 1382
BanII	GRGCYC	1 cut(s)	1715
BbsI	GAAGAC	2 cut(s)	141, 1565
Bbv12I	GWGCWC	2 cut(s)	1096, 1715
BbvI	GCAGC	5 cut(s)	655, 713, 889, 1197, 1411
BccI	CCATC	2 cut(s)	808, 1638
BceAI	ACGGC	3 cut(s)	48, 294, 1281
BciT130I	CCWGG	1 cut(s)	1617
BclI	TGATCA	1 cut(s)	946
BcoDI	GTCTC	2 cut(s)	233, 1497
BfaI	CTAG	5 cut(s)	143, 942, 1070, 1778, 1853
BfmI	CTRYAG	2 cut(s)	1387, 1425
BisI	GCNGC	5 cut(s)	669, 702, 878, 1186, 1425
BlnI	CCTAGG	1 cut(s)	1069
BlsI	GCNGC	5 cut(s)	670, 703, 879, 1187, 1426
Bme1390I	CCNGG	1 cut(s)	1617
Bme18I	GGWCC	1 cut(s)	351
BmeT110I	CYCGRG	1 cut(s)	1192
BmgBI	CACGTC	1 cut(s)	1729
BmgT120I	GGNCC	1 cut(s)	351
BmiI	GGNNCC	5 cut(s)	109, 297, 338, 1384, 1449
BmrFI	CCNGG	1 cut(s)	1617
BmrI	ACTGGG	1 cut(s)	1516
BmsI	GCATC	3 cut(s)	186, 1590, 1889
BmtI	GCTAGC	1 cut(s)	1781
BmuI	ACTGGG	1 cut(s)	1516
BpiI	GAAGAC	2 cut(s)	141, 1565
BpmI	CTGGAG	1 cut(s)	1521
BpuEI	CTTGAG	2 cut(s)	1080, 1343
BsaBI	GATNNNNATC	1 cut(s)	862
BsaHI	GRCGYC	1 cut(s)	1213
BsaI	GGTCTC	1 cut(s)	233
BsaJI	CCNNGG	4 cut(s)	1069, 1207, 1566, 1615
BsaWI	WCCGGW	5 cut(s)	21, 104, 333, 1450, 1702
Bsc4I	CCNNNNNNNGG	1 cut(s)	1358
Bse118I	RCCGGY	1 cut(s)	21
Bse1I	ACTGG	1 cut(s)	1511
Bse21I	CCTNAGG	1 cut(s)	786
Bse3DI	GCAATG	1 cut(s)	1373
Bse8I	GATNNNNATC	1 cut(s)	862
BseAI	TCCGGA	1 cut(s)	333
BseBI	CCWGG	1 cut(s)	1617
BseDI	CCNNGG	4 cut(s)	1069, 1207, 1566, 1615
BseGI	GGATG	4 cut(s)	419, 819, 1630, 1851
BseJI	GATNNNNATC	1 cut(s)	862
BseLI	CCNNNNNNNGG	1 cut(s)	1358
BseMI	GCAATG	1 cut(s)	1373
BseMII	CTCAG	4 cut(s)	129, 648, 800, 935
BseNI	ACTGG	1 cut(s)	1511
BseXI	GCAGC	5 cut(s)	655, 713, 889, 1197, 1411
BsgI	GTGCAG	1 cut(s)	720
Bsh1236I	CGCG	4 cut(s)	610, 1261, 1493, 1568
BshFI	GGCC	2 cut(s)	210, 1296
BshNI	GGYRCC	2 cut(s)	107, 1382
BshTI	ACCGGT	1 cut(s)	21
BsiHKAI	GWGCWC	2 cut(s)	1096, 1715
BsiHKCI	CYCGRG	1 cut(s)	1192
BsiSI	CCGG	6 cut(s)	22, 105, 334, 855, 1451, 1703
BslFI	GGGAC	1 cut(s)	1209
BslI	CCNNNNNNNGG	1 cut(s)	1358
BsmAI	GTCTC	2 cut(s)	233, 1497
BsmFI	GGGAC	1 cut(s)	1209
BsmI	GAATGC	1 cut(s)	781
BsnI	GGCC	2 cut(s)	210, 1296
Bso31I	GGTCTC	1 cut(s)	233
BsoBI	CYCGRG	1 cut(s)	1192
Bsp1286I	GDGCHC	2 cut(s)	1096, 1715
Bsp13I	TCCGGA	1 cut(s)	333
Bsp143I	GATC	8 cut(s)	120, 232, 295, 901, 946, 1065, 1264, 1285
BspACI	CCGC	9 cut(s)	35, 354, 704, 1261, 1306, 1512, 1528, 1566, 1568
BspANI	GGCC	2 cut(s)	210, 1296
BspCNI	CTCAG	4 cut(s)	128, 649, 799, 934
BspEI	TCCGGA	1 cut(s)	333
BspFNI	CGCG	4 cut(s)	610, 1261, 1493, 1568
BspLI	GGNNCC	5 cut(s)	109, 297, 338, 1384, 1449
BspMAI	CTGCAG	2 cut(s)	1391, 1429
BspOI	GCTAGC	1 cut(s)	1781
BspPI	GGATC	4 cut(s)	290, 303, 1060, 1272
BspQI	GCTCTTC	1 cut(s)	1659
BspT107I	GGYRCC	2 cut(s)	107, 1382
BspTNI	GGTCTC	1 cut(s)	233
BsrDI	GCAATG	1 cut(s)	1373
BsrFI	RCCGGY	1 cut(s)	21
BsrI	ACTGG	1 cut(s)	1511
BssAI	RCCGGY	1 cut(s)	21
BssECI	CCNNGG	4 cut(s)	1069, 1207, 1566, 1615
BssMI	GATC	8 cut(s)	120, 232, 295, 901, 946, 1065, 1264, 1285
BssNAI	GTATAC	1 cut(s)	553
BssNI	GRCGYC	1 cut(s)	1213
BssT1I	CCWWGG	2 cut(s)	1069, 1207
Bst1107I	GTATAC	1 cut(s)	553
Bst2UI	CCWGG	1 cut(s)	1617
Bst4CI	ACNGT	5 cut(s)	7, 711, 850, 1156, 1687
Bst6I	CTCTTC	4 cut(s)	423, 999, 1659, 1739
BstACI	GRCGYC	1 cut(s)	1213
BstAPI	GCANNNNNTGC	1 cut(s)	1421
BstC8I	GCNNGC	6 cut(s)	59, 307, 1092, 1183, 1387, 1779
BstDEI	CTNAG	5 cut(s)	115, 533, 657, 786, 921
BstDSI	CCRYGG	1 cut(s)	1566
BstF5I	GGATG	4 cut(s)	419, 819, 1630, 1851
BstFNI	CGCG	4 cut(s)	610, 1261, 1493, 1568
BstHHI	GCGC	4 cut(s)	610, 772, 877, 1174
BstKTI	GATC	8 cut(s)	123, 235, 298, 904, 949, 1068, 1267, 1288
BstMAI	GTCTC	2 cut(s)	233, 1497
BstMBI	GATC	8 cut(s)	120, 232, 295, 901, 946, 1065, 1264, 1285
BstMWI	GCNNNNNNNGC	7 cut(s)	674, 749, 776, 905, 1100, 1178, 1421
BstNI	CCWGG	1 cut(s)	1617
BstSCI	CCNGG	1 cut(s)	1615
BstSFI	CTRYAG	2 cut(s)	1387, 1425
BstUI	CGCG	4 cut(s)	610, 1261, 1493, 1568
BstV1I	GCAGC	5 cut(s)	655, 713, 889, 1197, 1411
BstV2I	GAAGAC	2 cut(s)	141, 1565
BstX2I	RGATCY	1 cut(s)	295
BstYI	RGATCY	1 cut(s)	295
BstZ17I	GTATAC	1 cut(s)	553
Bsu36I	CCTNAGG	1 cut(s)	786
BsuRI	GGCC	2 cut(s)	210, 1296
BtgI	CCRYGG	1 cut(s)	1566
BtrI	CACGTC	1 cut(s)	1729
BtsCI	GGATG	4 cut(s)	419, 819, 1630, 1851
BtsI	GCAGTG	1 cut(s)	363
BtsIMutI	CAGTG	1 cut(s)	363
Cac8I	GCNNGC	6 cut(s)	59, 307, 1092, 1183, 1387, 1779
CfoI	GCGC	4 cut(s)	610, 772, 877, 1174
Cfr10I	RCCGGY	1 cut(s)	21
Cfr13I	GGNCC	1 cut(s)	351
Cfr42I	CCGCGG	1 cut(s)	1569
CseI	GACGC	1 cut(s)	1482
Csp6I	GTAC	3 cut(s)	108, 982, 1299
CspAI	ACCGGT	1 cut(s)	21
CviAII	CATG	4 cut(s)	206, 212, 515, 1123
CviQI	GTAC	3 cut(s)	108, 982, 1299
DdeI	CTNAG	5 cut(s)	115, 533, 657, 786, 921
DpnI	GATC	8 cut(s)	122, 234, 297, 903, 948, 1067, 1266, 1287
DpnII	GATC	8 cut(s)	120, 232, 295, 901, 946, 1065, 1264, 1285
EaeI	YGGCCR	2 cut(s)	208, 1294
Eam1104I	CTCTTC	4 cut(s)	423, 999, 1659, 1739
EarI	CTCTTC	4 cut(s)	423, 999, 1659, 1739
EciI	GGCGGA	1 cut(s)	1527
Ecl136II	GAGCTC	1 cut(s)	1713
Eco130I	CCWWGG	2 cut(s)	1069, 1207
Eco24I	GRGCYC	1 cut(s)	1715
Eco31I	GGTCTC	1 cut(s)	233
Eco32I	GATATC	2 cut(s)	648, 1697
Eco47I	GGWCC	1 cut(s)	351
Eco53kI	GAGCTC	1 cut(s)	1713
Eco57I	CTGAAG	1 cut(s)	62
Eco81I	CCTNAGG	1 cut(s)	786
Eco88I	CYCGRG	1 cut(s)	1192
EcoICRI	GAGCTC	1 cut(s)	1713
EcoRI	GAATTC	1 cut(s)	828
EcoRII	CCWGG	1 cut(s)	1615
EcoRV	GATATC	2 cut(s)	648, 1697
EcoT14I	CCWWGG	2 cut(s)	1069, 1207
EcoT22I	ATGCAT	1 cut(s)	1605
EcoT38I	GRGCYC	1 cut(s)	1715
ErhI	CCWWGG	2 cut(s)	1069, 1207
FaeI	CATG	4 cut(s)	209, 215, 518, 1126
FalI	AAGNNNNNCTT	2 cut(s)	1305, 1337
FaqI	GGGAC	1 cut(s)	1209
FatI	CATG	4 cut(s)	205, 211, 514, 1122
FauI	CCCGC	2 cut(s)	1254, 1573
FbaI	TGATCA	1 cut(s)	946
FblI	GTMKAC	2 cut(s)	552, 1488
Fnu4HI	GCNGC	5 cut(s)	669, 702, 878, 1186, 1425
FokI	GGATG	4 cut(s)	426, 826, 1617, 1858
FriOI	GRGCYC	1 cut(s)	1715
Fsp4HI	GCNGC	5 cut(s)	669, 702, 878, 1186, 1425
FspBI	CTAG	5 cut(s)	143, 942, 1070, 1778, 1853
FspI	TGCGCA	2 cut(s)	771, 876
GlaI	GCGC	4 cut(s)	609, 771, 876, 1173
GluI	GCNGC	5 cut(s)	669, 702, 878, 1186, 1425
GsuI	CTGGAG	1 cut(s)	1521
HaeIII	GGCC	2 cut(s)	210, 1296
HapII	CCGG	6 cut(s)	22, 105, 334, 855, 1451, 1703
HgaI	GACGC	1 cut(s)	1482
HhaI	GCGC	4 cut(s)	610, 772, 877, 1174
Hin1I	GRCGYC	1 cut(s)	1213
Hin1II	CATG	4 cut(s)	209, 215, 518, 1126
Hin6I	GCGC	4 cut(s)	608, 770, 875, 1172
HinP1I	GCGC	4 cut(s)	608, 770, 875, 1172
HincII	GTYRAC	2 cut(s)	273, 1204
HindII	GTYRAC	2 cut(s)	273, 1204
HindIII	AAGCTT	2 cut(s)	471, 792
HinfI	GANTC	7 cut(s)	361, 593, 1226, 1393, 1648, 1814, 1926
HpaI	GTTAAC	1 cut(s)	273
HpaII	CCGG	6 cut(s)	22, 105, 334, 855, 1451, 1703
HphI	GGTGA	2 cut(s)	11, 1973
Hpy166II	GTNNAC	6 cut(s)	40, 273, 553, 654, 1204, 1489
Hpy188I	TCNGA	5 cut(s)	118, 924, 1463, 1599, 1885
Hpy8I	GTNNAC	6 cut(s)	40, 273, 553, 654, 1204, 1489
Hpy99I	CGWCG	2 cut(s)	34, 1730
HpyAV	CCTTC	4 cut(s)	121, 374, 724, 1891
HpyCH4III	ACNGT	5 cut(s)	7, 711, 850, 1156, 1687
HpyCH4IV	ACGT	8 cut(s)	269, 524, 555, 951, 999, 1044, 1213, 1728
HpyCH4V	TGCA	8 cut(s)	177, 518, 701, 1185, 1373, 1389, 1427, 1603
HpyF10VI	GCNNNNNNNGC	7 cut(s)	674, 749, 776, 905, 1100, 1178, 1421
HpyF3I	CTNAG	5 cut(s)	115, 533, 657, 786, 921
HpySE526I	ACGT	8 cut(s)	269, 524, 555, 951, 999, 1044, 1213, 1728
Hsp92I	GRCGYC	1 cut(s)	1213
Hsp92II	CATG	4 cut(s)	209, 215, 518, 1126
HspAI	GCGC	4 cut(s)	608, 770, 875, 1172
Kpn2I	TCCGGA	1 cut(s)	333
KpnI	GGTACC	1 cut(s)	111
Ksp22I	TGATCA	1 cut(s)	946
KspAI	GTTAAC	1 cut(s)	273
KspI	CCGCGG	1 cut(s)	1569
Kzo9I	GATC	8 cut(s)	120, 232, 295, 901, 946, 1065, 1264, 1285
LguI	GCTCTTC	1 cut(s)	1659
LmnI	GCTCC	1 cut(s)	884
Lsp1109I	GCAGC	5 cut(s)	655, 713, 889, 1197, 1411
LweI	GCATC	3 cut(s)	186, 1590, 1889
MaeI	CTAG	5 cut(s)	143, 942, 1070, 1778, 1853
MaeII	ACGT	8 cut(s)	269, 524, 555, 951, 999, 1044, 1213, 1728
MalI	GATC	8 cut(s)	122, 234, 297, 903, 948, 1067, 1266, 1287
MboI	GATC	8 cut(s)	120, 232, 295, 901, 946, 1065, 1264, 1285
MflI	RGATCY	1 cut(s)	295
MhlI	GDGCHC	2 cut(s)	1096, 1715
MlsI	TGGCCA	1 cut(s)	210
MluI	ACGCGT	1 cut(s)	1491
MluNI	TGGCCA	1 cut(s)	210
MmeI	TCCRAC	1 cut(s)	664
Mox20I	TGGCCA	1 cut(s)	210
Mph1103I	ATGCAT	1 cut(s)	1605
MroI	TCCGGA	1 cut(s)	333
MscI	TGGCCA	1 cut(s)	210
MseI	TTAA	7 cut(s)	48, 272, 1014, 1332, 1520, 1539, 1682
MslI	CAYNNNNRTG	3 cut(s)	210, 1089, 1359
Msp20I	TGGCCA	1 cut(s)	210
MspA1I	CMGCKG	3 cut(s)	704, 1499, 1568
MspI	CCGG	6 cut(s)	22, 105, 334, 855, 1451, 1703
MspR9I	CCNGG	1 cut(s)	1617
Mva1269I	GAATGC	1 cut(s)	781
MvaI	CCWGG	1 cut(s)	1617
MvnI	CGCG	4 cut(s)	610, 1261, 1493, 1568
MwoI	GCNNNNNNNGC	7 cut(s)	674, 749, 776, 905, 1100, 1178, 1421
NdeII	GATC	8 cut(s)	120, 232, 295, 901, 946, 1065, 1264, 1285
NheI	GCTAGC	1 cut(s)	1777
NlaIII	CATG	4 cut(s)	209, 215, 518, 1126
NlaIV	GGNNCC	5 cut(s)	109, 297, 338, 1384, 1449
NmuCI	GTSAC	3 cut(s)	1733, 1859, 1888
NsbI	TGCGCA	2 cut(s)	771, 876
NsiI	ATGCAT	1 cut(s)	1605
OliI	CACNNNNGTG	2 cut(s)	1089, 1359
PciSI	GCTCTTC	1 cut(s)	1659
PctI	GAATGC	1 cut(s)	781
PfeI	GAWTC	7 cut(s)	361, 593, 1226, 1393, 1648, 1814, 1926
PinAI	ACCGGT	1 cut(s)	21
PkrI	GCNGC	5 cut(s)	670, 703, 879, 1187, 1426
PsiI	TTATAA	1 cut(s)	1907
Psp124BI	GAGCTC	1 cut(s)	1715
Psp1406I	AACGTT	1 cut(s)	1044
Psp6I	CCWGG	1 cut(s)	1615
PspGI	CCWGG	1 cut(s)	1615
PspN4I	GGNNCC	5 cut(s)	109, 297, 338, 1384, 1449
PspPI	GGNCC	1 cut(s)	351
PstI	CTGCAG	2 cut(s)	1391, 1429
PsuI	RGATCY	1 cut(s)	295
PvuII	CAGCTG	1 cut(s)	1499
RsaI	GTAC	3 cut(s)	109, 983, 1300
RsaNI	GTAC	3 cut(s)	108, 982, 1299
RseI	CAYNNNNRTG	3 cut(s)	210, 1089, 1359
SacI	GAGCTC	1 cut(s)	1715
SacII	CCGCGG	1 cut(s)	1569
SapI	GCTCTTC	1 cut(s)	1659
SaqAI	TTAA	7 cut(s)	48, 272, 1014, 1332, 1520, 1539, 1682
SatI	GCNGC	5 cut(s)	669, 702, 878, 1186, 1425
Sau3AI	GATC	8 cut(s)	120, 232, 295, 901, 946, 1065, 1264, 1285
Sau96I	GGNCC	1 cut(s)	351
SbfI	CCTGCAGG	1 cut(s)	1391
ScrFI	CCNGG	1 cut(s)	1617
SdaI	CCTGCAGG	1 cut(s)	1391
SduI	GDGCHC	2 cut(s)	1096, 1715
SfaNI	GCATC	3 cut(s)	186, 1590, 1889
SfcI	CTRYAG	2 cut(s)	1387, 1425
Sfr303I	CCGCGG	1 cut(s)	1569
SgrBI	CCGCGG	1 cut(s)	1569
SinI	GGWCC	1 cut(s)	351
SmiMI	CAYNNNNRTG	3 cut(s)	210, 1089, 1359
SmlI	CTYRAG	2 cut(s)	1095, 1322
SmoI	CTYRAG	2 cut(s)	1095, 1322
Sse8387I	CCTGCAGG	1 cut(s)	1391
SsiI	CCGC	9 cut(s)	35, 354, 704, 1261, 1306, 1512, 1528, 1566, 1568
SspMI	CTAG	5 cut(s)	143, 942, 1070, 1778, 1853
SstI	GAGCTC	1 cut(s)	1715
StyD4I	CCNGG	1 cut(s)	1615
StyI	CCWWGG	2 cut(s)	1069, 1207
TaaI	ACNGT	5 cut(s)	7, 711, 850, 1156, 1687
TaiI	ACGT	8 cut(s)	272, 527, 558, 954, 1002, 1047, 1216, 1731
TaqI	TCGA	9 cut(s)	29, 168, 231, 318, 832, 986, 1028, 1061, 1284
TatI	WGTACW	1 cut(s)	981
TfiI	GAWTC	7 cut(s)	361, 593, 1226, 1393, 1648, 1814, 1926
Tru1I	TTAA	7 cut(s)	48, 272, 1014, 1332, 1520, 1539, 1682
Tru9I	TTAA	7 cut(s)	48, 272, 1014, 1332, 1520, 1539, 1682
TscAI	CASTG	1 cut(s)	363
TseFI	GTSAC	3 cut(s)	1733, 1859, 1888
TseI	GCWGC	5 cut(s)	668, 701, 877, 1185, 1424
Tsp45I	GTSAC	3 cut(s)	1733, 1859, 1888
TspDTI	ATGAA	8 cut(s)	194, 408, 500, 503, 639, 1046, 1106, 1847
TspGWI	ACGGA	2 cut(s)	209, 1371
TspRI	CASTG	1 cut(s)	363
VpaK11BI	GGWCC	1 cut(s)	351
XapI	RAATTY	5 cut(s)	201, 386, 496, 828, 1837
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1940
XmaJI	CCTAGG	1 cut(s)	1069
XmiI	GTMKAC	2 cut(s)	552, 1488
XspI	CTAG	5 cut(s)	143, 942, 1070, 1778, 1853
ZraI	GACGTC	1 cut(s)	1214
Zsp2I	ATGCAT	1 cut(s)	1605

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.