Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0014443

Physical Location & Seq

Genomic Coordinates Forward (+)

11752443 .. 11754389

Gene Structure 1947 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000016976

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1692 bp

ATGCAAAGCCTCTCTCGCAAATTCTCAACTCTCCCAATTCCCAAGCTTTCACCTTCACACCCACAACCCACCAAACCCTTCATTCCATACTCTGAGATTCAGCATTGCCGGAAAATCTTAGAGCACAAAATCATTACTATTCTAGACGTGTGCAACACCCTCAACCATGTCAAGCAGGTTCACGCTCACGTCATCGGAAATGGGCTCAGCCAATACAGCTACGTCATCACTAAGCTCGTCCGCACGCTCACCAAGCTCGGAGTCCCAATGCGCACCTACCCGGAACTCGTCTTCCGGCAGGTGTTGCACCCGAACCCGTTTCTCTGGGCGGCTATGATTAGAGGGTGTGCAATTGAAGGAACTCTTTCGGAAGCGGTGAAGTATTACACTTTGATGAGGAGGGAGGGCACTGGGCCGGTTTCGTTTACGTTCTCGGCGCTGTTCAAGGCCTGTGGGGGTGTTCTTGATGTGAATTTGGGCCGGCAGATACATGCGCAGACGGTTTTGATCGGTGGGTTTGTGGCGGATTTGTACGTGGGGAACACTATGATTGATATGTATTTGAAGTGTGGGTTTCTGGATTGCGGGCGCAAGGTGTTTGATGAAATGCCTGAGAGGGATGTGGTTTCGTGGACCGGGTTGATTGTGGCGTATGCCAAGAGTGGGGATATGGAGTCGGCGAGGGAGTTGTTTGAGGATTTGAGTTTGAAAGATATGGTGGTGTGGACGGCTATGGTTACTGGCTATGCCCAGAATTCGATGCCGAAAGAGGCGTTGGATTGCTTTGAGAGAATGCGAGGTGCTGGTGTAGGGCTCGATGAGGTTACATTGCTCGGGGTTATTTCGGCTTGTGCACAATTGGGTGCTTCTAGGTGTGCTAATTGGGTTCGAGACATTGCTGAGGAATCTGGTTTTAGGCCTACTGAGAATGTGCTTGTGGGATCTGCATTGATAGATATGTACTCGAAGTGTGGGAGCTTGGATGATGCATACAATATTTTTCAGGGGATGAAGCAAAGGAATGTGTTTTCTTATAGCTCGATGATTTGGGGATTTGCAGTGCATGGAAATGCCAATGCAGCGATAGGATTGTTTCATGAGATGCTGACCACTGATGTAAGGCCGAACCGGGTTACTTTTATAGGTGTGCTAACTGCCTGCAGCCACGCGGGGATGGTTGATCAAGGTCGGCAGTTATTTGCAACGATGGAGAAGTATTACAATGTCACTCCATCAGCTGATCATTACACTTGTATGGTAGACTTGCTTGGTCGAGCTGGGCGCTTGGAAGAAGCTCTCGAGCTAGCTGAGACAATGCCGATTGTCGCACATGGAGGTGAAACGAGTCACCCCGAATACAACAAGATTAAGAAGGCGTTGGAGGATCTTCTAAACAGATTGCAGGATCTTGGCTATAGGCCAAACCTAAATTCGGTGGATTATGATGTGGGGGATGAAGAAAAGATGCGTATATTGATGGCTCATAGCGAAAAACCGGCTTTGGCATACGCATTGCTCTACGCAGATTCTGGTTCCACCATTAAGATCGCCAAGAACATAAGGATTTGTGAAGACTGTCATGCCTTCATGTGTGGTGCATCACGGGTTACAGGAAGGCATATTATTGTCAGAGATAACATGAGATTCCACCACTTCGAAAATGGGACTTGTAATTGTGGCAACTTTTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

564

Amino Acids

62.74

Weight (kDa)

6.68

Isoelectric Point (pI)

32.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	238 - 285	8.1e-07	PPR repeat family
PPR	PF01535	240 - 270	2.9e-07	PPR repeat
PPR_2	PF13041	340 - 388	2.3e-08	PPR repeat family
DYW_deaminase	PF14432	471 - 563	2.6e-39	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014443)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G44230 AT5G44230
fragaria_vesca	FvH4_1g12540
malus_domestica	MD15G1252800.v1.1
prunus_persica	Prupe.7G161300_v2.0.a1
pyrus_communis	pycom15g22270
rosa_chinensis	RchiOBHm_Chr2g0100491
rosa_laevigata	RLG00000016976
rosa_multiflora	Rmu_sc0000528.1_g000023 Rmu_sc0020397.1_g000001
rosa_roxburghii	Rroxscaffold_2G00142190
rosa_rugosa	Rorug02G0088600
rosa_samantha	Rh2AG138300 Rh2BG141300 Rh2CG143500 Rh2DG143100
rosa_wichuraiana	Rw2G010810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	289
Acc16I	TGCGCA	2 cut(s)	272, 495
Acc36I	ACCTGC	2 cut(s)	166, 289
AccI	GTMKAC	1 cut(s)	1260
AccII	CGCG	1 cut(s)	1169
AciI	CCGC	6 cut(s)	241, 329, 374, 524, 585, 1169
AclWI	GGATC	3 cut(s)	949, 1392, 1413
AcsI	RAATTY	4 cut(s)	20, 472, 754, 1429
AfaI	GTAC	2 cut(s)	533, 962
AfiI	CCNNNNNNNGG	2 cut(s)	663, 1432
AflIII	ACRYGT	1 cut(s)	147
AgsI	TTSAA	4 cut(s)	356, 445, 565, 709
AjiI	CACGTC	2 cut(s)	148, 190
AjuI	GAANNNNNNNTTGG	4 cut(s)	758, 790, 1414, 1446
AloI	GAACNNNNNNTCC	2 cut(s)	276, 308
Alw21I	GWGCWC	2 cut(s)	126, 856
Alw26I	GTCTC	2 cut(s)	885, 1304
Alw44I	GTGCAC	1 cut(s)	852
AlwI	GGATC	3 cut(s)	949, 1392, 1413
AlwNI	CAGNNNCTG	1 cut(s)	1529
Ama87I	CYCGRG	2 cut(s)	833, 1298
AoxI	GGCC	6 cut(s)	413, 447, 478, 917, 1121, 1418
ApaLI	GTGCAC	1 cut(s)	852
ApeKI	GCWGC	2 cut(s)	1079, 1161
ApoI	RAATTY	4 cut(s)	20, 472, 754, 1429
Asp700I	GAANNNNTTC	1 cut(s)	364
AspLEI	GCGC	5 cut(s)	273, 439, 496, 591, 1284
AspS9I	GGNCC	3 cut(s)	413, 478, 633
AsuC2I	CCSGG	3 cut(s)	281, 637, 1130
AsuHPI	GGTGA	5 cut(s)	42, 241, 388, 1340, 1349
AsuII	TTCGAA	1 cut(s)	1656
AsuNHI	GCTAGC	1 cut(s)	1303
AvaI	CYCGRG	2 cut(s)	833, 1298
AvaII	GGWCC	1 cut(s)	633
BaeGI	GKGCMC	2 cut(s)	410, 856
BanII	GRGCYC	2 cut(s)	207, 816
BbsI	GAAGAC	2 cut(s)	283, 1578
Bbv12I	GWGCWC	2 cut(s)	126, 856
BbvCI	CCTCAGC	1 cut(s)	900
BbvI	GCAGC	2 cut(s)	1091, 1173
BccI	CCATC	4 cut(s)	1168, 1201, 1240, 1471
BceAI	ACGGC	1 cut(s)	744
BclI	TGATCA	2 cut(s)	1180, 1240
BcnI	CCSGG	3 cut(s)	281, 637, 1130
BcoDI	GTCTC	2 cut(s)	885, 1304
BfaI	CTAG	3 cut(s)	143, 870, 1304
BfmI	CTRYAG	2 cut(s)	1159, 1414
BfoI	RGCGCY	2 cut(s)	440, 1285
BfuAI	ACCTGC	2 cut(s)	166, 289
BisI	GCNGC	3 cut(s)	330, 1080, 1162
BlpI	GCTNAGC	1 cut(s)	206
BlsI	GCNGC	3 cut(s)	331, 1081, 1163
Bme1390I	CCNGG	3 cut(s)	281, 637, 1130
Bme18I	GGWCC	1 cut(s)	633
BmeT110I	CYCGRG	2 cut(s)	833, 1298
BmgBI	CACGTC	2 cut(s)	148, 190
BmgT120I	GGNCC	3 cut(s)	413, 478, 633
BmiI	GGNNCC	1 cut(s)	1534
BmrFI	CCNGG	3 cut(s)	281, 637, 1130
BmrI	ACTGGG	1 cut(s)	420
BmsI	GCATC	5 cut(s)	750, 976, 1092, 1455, 1607
BmtI	GCTAGC	1 cut(s)	1307
BmuI	ACTGGG	1 cut(s)	420
BpiI	GAAGAC	2 cut(s)	283, 1578
Bpu10I	CCTNAGC	1 cut(s)	900
Bpu1102I	GCTNAGC	1 cut(s)	206
Bpu14I	TTCGAA	1 cut(s)	1656
BpuMI	CCSGG	3 cut(s)	281, 637, 1130
BsaAI	YACGTR	1 cut(s)	535
Bsc4I	CCNNNNNNNGG	2 cut(s)	663, 1432
Bse118I	RCCGGY	3 cut(s)	415, 480, 1495
Bse1I	ACTGG	2 cut(s)	415, 745
Bse3DI	GCAATG	4 cut(s)	103, 827, 894, 1511
BseGI	GGATG	5 cut(s)	625, 988, 1014, 1179, 1459
BseLI	CCNNNNNNNGG	2 cut(s)	663, 1432
BseMI	GCAATG	4 cut(s)	103, 827, 894, 1511
BseMII	CTCAG	6 cut(s)	84, 220, 603, 891, 915, 1299
BseNI	ACTGG	2 cut(s)	415, 745
BseRI	GAGGAG	1 cut(s)	412
BseSI	GKGCMC	2 cut(s)	410, 856
BseXI	GCAGC	2 cut(s)	1091, 1173
BseYI	CCCAGC	1 cut(s)	1277
Bsh1236I	CGCG	1 cut(s)	1169
BshFI	GGCC	6 cut(s)	415, 449, 480, 919, 1123, 1420
BsiHKAI	GWGCWC	2 cut(s)	126, 856
BsiHKCI	CYCGRG	2 cut(s)	833, 1298
BsiSI	CCGG	8 cut(s)	109, 281, 295, 416, 481, 636, 1129, 1496
BslFI	GGGAC	2 cut(s)	248, 1678
BslI	CCNNNNNNNGG	2 cut(s)	663, 1432
BsmAI	GTCTC	2 cut(s)	885, 1304
BsmFI	GGGAC	2 cut(s)	248, 1678
BsmI	GAATGC	1 cut(s)	798
BsnI	GGCC	6 cut(s)	415, 449, 480, 919, 1123, 1420
BsoBI	CYCGRG	2 cut(s)	833, 1298
Bsp119I	TTCGAA	1 cut(s)	1656
Bsp1286I	GDGCHC	5 cut(s)	126, 207, 410, 816, 856
Bsp143I	GATC	7 cut(s)	507, 941, 1180, 1240, 1384, 1405, 1545
Bsp1720I	GCTNAGC	1 cut(s)	206
BspACI	CCGC	6 cut(s)	241, 329, 374, 524, 585, 1169
BspANI	GGCC	6 cut(s)	415, 449, 480, 919, 1123, 1420
BspCNI	CTCAG	6 cut(s)	85, 219, 604, 892, 916, 1300
BspFNI	CGCG	1 cut(s)	1169
BspHI	TCATGA	1 cut(s)	1096
BspLI	GGNNCC	1 cut(s)	1534
BspMAI	CTGCAG	1 cut(s)	1163
BspMI	ACCTGC	2 cut(s)	166, 289
BspOI	GCTAGC	1 cut(s)	1307
BspPI	GGATC	3 cut(s)	949, 1392, 1413
BspT104I	TTCGAA	1 cut(s)	1656
BsrDI	GCAATG	4 cut(s)	103, 827, 894, 1511
BsrFI	RCCGGY	3 cut(s)	415, 480, 1495
BsrI	ACTGG	2 cut(s)	415, 745
BssAI	RCCGGY	3 cut(s)	415, 480, 1495
BssMI	GATC	7 cut(s)	507, 941, 1180, 1240, 1384, 1405, 1545
Bst4CI	ACNGT	2 cut(s)	502, 1577
BstAPI	GCANNNNNTGC	1 cut(s)	304
BstBAI	YACGTR	1 cut(s)	535
BstBI	TTCGAA	1 cut(s)	1656
BstC8I	GCNNGC	5 cut(s)	245, 482, 587, 1159, 1305
BstDEI	CTNAG	8 cut(s)	93, 118, 206, 231, 612, 900, 924, 1308
BstF5I	GGATG	5 cut(s)	625, 988, 1014, 1179, 1459
BstFNI	CGCG	1 cut(s)	1169
BstH2I	RGCGCY	2 cut(s)	440, 1285
BstHHI	GCGC	5 cut(s)	273, 439, 496, 591, 1284
BstKTI	GATC	7 cut(s)	510, 944, 1183, 1243, 1387, 1408, 1548
BstMAI	GTCTC	2 cut(s)	885, 1304
BstMBI	GATC	7 cut(s)	507, 941, 1180, 1240, 1384, 1405, 1545
BstMWI	GCNNNNNNNGC	5 cut(s)	15, 216, 253, 304, 1079
BstNSI	RCATGY	1 cut(s)	494
BstSCI	CCNGG	3 cut(s)	279, 635, 1128
BstSFI	CTRYAG	2 cut(s)	1159, 1414
BstSLI	GKGCMC	2 cut(s)	410, 856
BstUI	CGCG	1 cut(s)	1169
BstV1I	GCAGC	2 cut(s)	1091, 1173
BstV2I	GAAGAC	2 cut(s)	283, 1578
BstX2I	RGATCY	3 cut(s)	941, 1384, 1405
BstYI	RGATCY	3 cut(s)	941, 1384, 1405
BsuRI	GGCC	6 cut(s)	415, 449, 480, 919, 1123, 1420
BtrI	CACGTC	2 cut(s)	148, 190
BtsCI	GGATG	5 cut(s)	625, 988, 1014, 1179, 1459
BtsI	GCAGTG	1 cut(s)	1065
BtsIMutI	CAGTG	3 cut(s)	408, 1065, 1110
BveI	ACCTGC	2 cut(s)	166, 289
Cac8I	GCNNGC	5 cut(s)	245, 482, 587, 1159, 1305
CaiI	CAGNNNCTG	1 cut(s)	1529
CciI	TCATGA	1 cut(s)	1096
CfoI	GCGC	5 cut(s)	273, 439, 496, 591, 1284
Cfr10I	RCCGGY	3 cut(s)	415, 480, 1495
Cfr13I	GGNCC	3 cut(s)	413, 478, 633
Csp6I	GTAC	2 cut(s)	532, 961
CspCI	CAANNNNNGTGG	2 cut(s)	433, 468
CviAII	CATG	8 cut(s)	167, 491, 1064, 1097, 1331, 1580, 1588, 1639
CviQI	GTAC	2 cut(s)	532, 961
DdeI	CTNAG	8 cut(s)	93, 118, 206, 231, 612, 900, 924, 1308
DpnI	GATC	7 cut(s)	509, 943, 1182, 1242, 1386, 1407, 1547
DpnII	GATC	7 cut(s)	507, 941, 1180, 1240, 1384, 1405, 1545
EciI	GGCGGA	1 cut(s)	539
Eco147I	AGGCCT	2 cut(s)	449, 919
Eco24I	GRGCYC	2 cut(s)	207, 816
Eco47I	GGWCC	1 cut(s)	633
Eco88I	CYCGRG	2 cut(s)	833, 1298
EcoRI	GAATTC	1 cut(s)	754
EcoT22I	ATGCAT	1 cut(s)	991
EcoT38I	GRGCYC	2 cut(s)	207, 816
FaeI	CATG	8 cut(s)	170, 494, 1067, 1100, 1334, 1583, 1591, 1642
FalI	AAGNNNNNCTT	2 cut(s)	348, 380
FaqI	GGGAC	2 cut(s)	248, 1678
FatI	CATG	8 cut(s)	166, 490, 1063, 1096, 1330, 1579, 1587, 1638
FauI	CCCGC	2 cut(s)	578, 1162
FbaI	TGATCA	2 cut(s)	1180, 1240
FblI	GTMKAC	1 cut(s)	1260
Fnu4HI	GCNGC	3 cut(s)	330, 1080, 1162
FokI	GGATG	5 cut(s)	632, 995, 1021, 1186, 1466
FriOI	GRGCYC	2 cut(s)	207, 816
Fsp4HI	GCNGC	3 cut(s)	330, 1080, 1162
FspAI	RTGCGCAY	1 cut(s)	272
FspBI	CTAG	3 cut(s)	143, 870, 1304
FspI	TGCGCA	2 cut(s)	272, 495
GlaI	GCGC	5 cut(s)	272, 438, 495, 590, 1283
GluI	GCNGC	3 cut(s)	330, 1080, 1162
GsaI	CCCAGC	1 cut(s)	1281
HaeII	RGCGCY	2 cut(s)	440, 1285
HaeIII	GGCC	6 cut(s)	415, 449, 480, 919, 1123, 1420
HapII	CCGG	8 cut(s)	109, 281, 295, 416, 481, 636, 1129, 1496
HhaI	GCGC	5 cut(s)	273, 439, 496, 591, 1284
Hin1II	CATG	8 cut(s)	170, 494, 1067, 1100, 1334, 1583, 1591, 1642
Hin6I	GCGC	5 cut(s)	271, 437, 494, 589, 1282
HinP1I	GCGC	5 cut(s)	271, 437, 494, 589, 1282
HindIII	AAGCTT	1 cut(s)	44
HinfI	GANTC	7 cut(s)	97, 261, 674, 905, 1345, 1526, 1644
HpaII	CCGG	8 cut(s)	109, 281, 295, 416, 481, 636, 1129, 1496
HphI	GGTGA	5 cut(s)	42, 241, 388, 1340, 1349
Hpy166II	GTNNAC	6 cut(s)	181, 426, 633, 726, 854, 1261
Hpy188I	TCNGA	5 cut(s)	94, 197, 260, 370, 1631
Hpy188III	TCNNGA	6 cut(s)	143, 464, 578, 890, 1097, 1298
Hpy8I	GTNNAC	6 cut(s)	181, 426, 633, 726, 854, 1261
HpyAV	CCTTC	6 cut(s)	63, 88, 350, 1366, 1594, 1608
HpyCH4III	ACNGT	2 cut(s)	502, 1577
HpyCH4IV	ACGT	5 cut(s)	147, 189, 222, 428, 534
HpyF10VI	GCNNNNNNNGC	5 cut(s)	15, 216, 253, 304, 1079
HpyF3I	CTNAG	8 cut(s)	93, 118, 206, 231, 612, 900, 924, 1308
HpySE526I	ACGT	5 cut(s)	147, 189, 222, 428, 534
Hsp92II	CATG	8 cut(s)	170, 494, 1067, 1100, 1334, 1583, 1591, 1642
HspAI	GCGC	5 cut(s)	271, 437, 494, 589, 1282
KroI	GCCGGC	1 cut(s)	480
KroNI	GCCGGC	1 cut(s)	482
Ksp22I	TGATCA	2 cut(s)	1180, 1240
Kzo9I	GATC	7 cut(s)	507, 941, 1180, 1240, 1384, 1405, 1545
LmnI	GCTCC	1 cut(s)	975
Lsp1109I	GCAGC	2 cut(s)	1091, 1173
LweI	GCATC	5 cut(s)	750, 976, 1092, 1455, 1607
MaeI	CTAG	3 cut(s)	143, 870, 1304
MaeII	ACGT	5 cut(s)	147, 189, 222, 428, 534
MaeIII	GTNAC	6 cut(s)	736, 823, 1132, 1225, 1346, 1606
MalI	GATC	7 cut(s)	509, 943, 1182, 1242, 1386, 1407, 1547
MboI	GATC	7 cut(s)	507, 941, 1180, 1240, 1384, 1405, 1545
MboII	GAAGA	5 cut(s)	283, 1301, 1379, 1469, 1583
MfeI	CAATTG	2 cut(s)	351, 857
MflI	RGATCY	3 cut(s)	941, 1384, 1405
MhlI	GDGCHC	5 cut(s)	126, 207, 410, 816, 856
MluCI	AATT	9 cut(s)	20, 36, 351, 472, 754, 857, 880, 1429, 1672
MlyI	GAGTC	3 cut(s)	270, 683, 1354
MmeI	TCCRAC	2 cut(s)	756, 1359
Mph1103I	ATGCAT	1 cut(s)	991
MroNI	GCCGGC	1 cut(s)	480
MroXI	GAANNNNTTC	1 cut(s)	364
MseI	TTAA	2 cut(s)	1368, 1542
MslI	CAYNNNNRTG	4 cut(s)	392, 1068, 1253, 1335
MspA1I	CMGCKG	1 cut(s)	1238
MspI	CCGG	8 cut(s)	109, 281, 295, 416, 481, 636, 1129, 1496
MspR9I	CCNGG	3 cut(s)	281, 637, 1130
MunI	CAATTG	2 cut(s)	351, 857
Mva1269I	GAATGC	1 cut(s)	798
MvnI	CGCG	1 cut(s)	1169
MwoI	GCNNNNNNNGC	5 cut(s)	15, 216, 253, 304, 1079
NaeI	GCCGGC	1 cut(s)	482
NciI	CCSGG	3 cut(s)	281, 637, 1130
NdeII	GATC	7 cut(s)	507, 941, 1180, 1240, 1384, 1405, 1545
NgoMIV	GCCGGC	1 cut(s)	480
NheI	GCTAGC	1 cut(s)	1303
NlaIII	CATG	8 cut(s)	170, 494, 1067, 1100, 1334, 1583, 1591, 1642
NlaIV	GGNNCC	1 cut(s)	1534
NmeAIII	GCCGAG	1 cut(s)	413
NmuCI	GTSAC	2 cut(s)	1225, 1346
NsbI	TGCGCA	2 cut(s)	272, 495
NsiI	ATGCAT	1 cut(s)	991
NspI	RCATGY	1 cut(s)	494
NspV	TTCGAA	1 cut(s)	1656
PaeR7I	CTCGAG	1 cut(s)	1298
PagI	TCATGA	1 cut(s)	1096
PaqCI	CACCTGC	1 cut(s)	289
PceI	AGGCCT	2 cut(s)	449, 919
PctI	GAATGC	1 cut(s)	798
PdiI	GCCGGC	1 cut(s)	482
PdmI	GAANNNNTTC	1 cut(s)	364
PfeI	GAWTC	4 cut(s)	97, 905, 1526, 1644
PkrI	GCNGC	3 cut(s)	331, 1081, 1163
PleI	GAGTC	3 cut(s)	269, 682, 1353
PpsI	GAGTC	3 cut(s)	269, 682, 1353
Ppu21I	YACGTR	1 cut(s)	535
PspFI	CCCAGC	1 cut(s)	1277
PspN4I	GGNNCC	1 cut(s)	1534
PspPI	GGNCC	3 cut(s)	413, 478, 633
PstI	CTGCAG	1 cut(s)	1163
PstNI	CAGNNNCTG	1 cut(s)	1529
PsuI	RGATCY	3 cut(s)	941, 1384, 1405
PvuII	CAGCTG	1 cut(s)	1238
RsaI	GTAC	2 cut(s)	533, 962
RsaNI	GTAC	2 cut(s)	532, 961
RseI	CAYNNNNRTG	4 cut(s)	392, 1068, 1253, 1335
SaqAI	TTAA	2 cut(s)	1368, 1542
SatI	GCNGC	3 cut(s)	330, 1080, 1162
Sau3AI	GATC	7 cut(s)	507, 941, 1180, 1240, 1384, 1405, 1545
Sau96I	GGNCC	3 cut(s)	413, 478, 633
SchI	GAGTC	3 cut(s)	270, 683, 1354
ScrFI	CCNGG	3 cut(s)	281, 637, 1130
SduI	GDGCHC	5 cut(s)	126, 207, 410, 816, 856
SfaNI	GCATC	5 cut(s)	750, 976, 1092, 1455, 1607
SfcI	CTRYAG	2 cut(s)	1159, 1414
Sfr274I	CTCGAG	1 cut(s)	1298
SfuI	TTCGAA	1 cut(s)	1656
SinI	GGWCC	1 cut(s)	633
SlaI	CTCGAG	1 cut(s)	1298
SmiMI	CAYNNNNRTG	4 cut(s)	392, 1068, 1253, 1335
SmlI	CTYRAG	1 cut(s)	1298
SmoI	CTYRAG	1 cut(s)	1298
Sse9I	AATT	9 cut(s)	20, 36, 351, 472, 754, 857, 880, 1429, 1672
SseBI	AGGCCT	2 cut(s)	449, 919
SsiI	CCGC	6 cut(s)	241, 329, 374, 524, 585, 1169
SspI	AATATT	1 cut(s)	997
SspMI	CTAG	3 cut(s)	143, 870, 1304
StuI	AGGCCT	2 cut(s)	449, 919
StyD4I	CCNGG	3 cut(s)	279, 635, 1128
TaaI	ACNGT	2 cut(s)	502, 1577
TaiI	ACGT	5 cut(s)	150, 192, 225, 431, 537
TaqI	TCGA	8 cut(s)	758, 816, 889, 965, 1040, 1273, 1299, 1656
TasI	AATT	9 cut(s)	20, 36, 351, 472, 754, 857, 880, 1429, 1672
TatI	WGTACW	1 cut(s)	960
TauI	GCSGC	1 cut(s)	332
TfiI	GAWTC	4 cut(s)	97, 905, 1526, 1644
Tru1I	TTAA	2 cut(s)	1368, 1542
Tru9I	TTAA	2 cut(s)	1368, 1542
TscAI	CASTG	3 cut(s)	415, 1065, 1117
TseFI	GTSAC	2 cut(s)	1225, 1346
TseI	GCWGC	2 cut(s)	1079, 1161
Tsp45I	GTSAC	2 cut(s)	1225, 1346
TspDTI	ATGAA	6 cut(s)	70, 618, 1025, 1085, 1470, 1576
TspRI	CASTG	3 cut(s)	415, 1065, 1117
VneI	GTGCAC	1 cut(s)	852
VpaK11BI	GGWCC	1 cut(s)	633
XapI	RAATTY	4 cut(s)	20, 472, 754, 1429
XbaI	TCTAGA	1 cut(s)	142
XceI	RCATGY	1 cut(s)	494
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1658
XhoI	CTCGAG	1 cut(s)	1298
XmiI	GTMKAC	1 cut(s)	1260
XmnI	GAANNNNTTC	1 cut(s)	364
XspI	CTAG	3 cut(s)	143, 870, 1304
Zsp2I	ATGCAT	1 cut(s)	991

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.