Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0014443

Physical Location & Seq

Genomic Coordinates Reverse (-)

80333669 .. 80335569

Gene Structure 1901 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00142190.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1689 bp

ATGCAAAACCTCTCTCGCAAATTCTCAACTCTCCCAATTCCCAAGCTTTCACCTTCACACCCACCGCCCACCAGACCCTTCATTCCATACTCTGAGATTCAGCATTGCCGTAAGATCTTAGAGCACAAAATCATTACTATTCTAGACGTGTGCAACACCGTCAACCATGTCAAGCAGGTTCACGCTCACGTCATCGGCAATGGGCTCAGCCAATACAGCTACGTCATCACCAAGCTCGTCCGCACGCTCACCAAGCTCGGAGTCCCAATGCCCACCTACCCGGAGCTCGTCTTCCGGCAGGGCACGGGGCCGGTTTCGTTTACGTTCTCGGCGCTGTTCAAGGCCTGTGGGAGTGTTCTTGATGTGAATTTGGGGCGGCAGATACATGCGCAGACGGTTTTGATCGGTGGGTTTGTGGCGGATTTGTACGTGGGGAACACCATGATTGATATGTATTTGAAGTGTGGGTTTTTGGATTGTGGGCGCAAGGTGTTTGATGAAATGCCTGACAGGGATGTGGTTTCGTGGACCGAGTTGATTGTGGCGTATGCCAAGAGTGGGGATATGGAGTCGGCGAGGGACTTGTTTGAGGATTTGAGTTTGAAAGATATGGTGGTGTGGACGGCTATGGTTACTGGCTATGCCCAGAATTCGATGCCGAAAGAGGCGTTGGATTGCTTTGAGAGAATGCGAGGTGCTGCTGTAGGGCTCGATGAGAATGTGCTTGTGGGATCTGCATTGATAGATATGTACTCGAAGTGTGGGAGCTTGGATGATGCGTACAATATTTTTCAGGAGATGAAGCAAAGGAATGTGTTTGCTTATAGCTCAATGATTTGGGGATTTGCAGTGCATGGAAATGCCAATGCAGCAATAGGATTGTTTCATGAGATGCTGACCACTGATGTAAGGCCAAATCGGGTTACTTTTATTGGTGTTCTAACTGCCTGCAGCCACGCGGGGATGGTTGATCAAGGTCGGCAGTTATTTGCAACGATGGAGAAGTTTTACAATGTCACTCCATCAGTTGATCATTACACTTGTATGGTAGACTTGCTTGGTCGAGCTGGGCGCTTGGAAGAAGCTCTCGAGCTAGCTGAGACAATGCCGATAGTTGCACATGGAGGTGTGTGGGGAGCGCTACTTGGTGCCTGCCGTATCCATAAGAACCCCGACATTGCTCAAATTGCTGCCACCCATCTAATTGAGCTTGAACCTAATAATATTGGAAACTATGTGATGCTCTCCAACATATATGCATCAGCAGGAAGGTTGGGTGATGTTTCAAATGTTAGGAAGCTGATGAGAGAAAAGGGTCTGAAAAAAAACCCTGCATATAGCTGGGTTGAAACAAAGAACGGACACGAAGAGTTTTGTGCAGGTGAAACGAGTCACCCCGAATACAACAAGATTAAGAAGGCGTTGGAGGATCTTCTAAACGGATTGCAGGATCTTGGCTATAGGCCAAACCTAAATTCGGTGGATTATGATGTGGGGGATGAAGAAAATATGCGTATATTGATGGCTCATAGCGAAAAACTGGCTTTGGCATACGCATTGCTCTACGCAGATTCTGGTTCCACCATTAAGATCGCCAAGAACATAAGGATTTGTGAAGACTGTCATGCCTTCATGTGTGTGGTGCATCACGGGTTACAGGAAGGCATATTATTGTCAGAGATAACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

562

Amino Acids

62.39

Weight (kDa)

6.06

Isoelectric Point (pI)

33.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR	PF01535	205 - 231	2.2e-06	PPR repeat
PPR_2	PF13041	270 - 318	2.6e-08	PPR repeat family
E_motif	PF20431	388 - 450	9.1e-20	E motif
DYW_deaminase	PF14432	486 - 558	2.6e-22	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014443)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G44230 AT5G44230
fragaria_vesca	FvH4_1g12540
malus_domestica	MD15G1252800.v1.1
prunus_persica	Prupe.7G161300_v2.0.a1
pyrus_communis	pycom15g22270
rosa_chinensis	RchiOBHm_Chr2g0100491
rosa_laevigata	RLG00000016976
rosa_multiflora	Rmu_sc0000528.1_g000023 Rmu_sc0020397.1_g000001
rosa_roxburghii	Rroxscaffold_2G00142190
rosa_rugosa	Rorug02G0088600
rosa_samantha	Rh2AG138300 Rh2BG141300 Rh2CG143500 Rh2DG143100
rosa_wichuraiana	Rw2G010810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1370
Acc16I	TGCGCA	1 cut(s)	390
Acc36I	ACCTGC	2 cut(s)	166, 1370
AccB1I	GGYRCC	1 cut(s)	1148
AccI	GTMKAC	1 cut(s)	1050
AccII	CGCG	1 cut(s)	959
AciI	CCGC	5 cut(s)	65, 241, 376, 419, 959
AclWI	GGATC	3 cut(s)	739, 1437, 1458
AcsI	RAATTY	4 cut(s)	20, 367, 649, 1474
AfaI	GTAC	3 cut(s)	428, 752, 782
AfeI	AGCGCT	1 cut(s)	1140
AfiI	CCNNNNNNNGG	2 cut(s)	558, 1477
AflIII	ACRYGT	1 cut(s)	147
AgsI	TTSAA	6 cut(s)	340, 460, 604, 1214, 1287, 1349
AjiI	CACGTC	2 cut(s)	148, 190
AjuI	GAANNNNNNNTTGG	4 cut(s)	653, 685, 1459, 1491
Alw21I	GWGCWC	2 cut(s)	126, 288
Alw26I	GTCTC	1 cut(s)	1094
AlwI	GGATC	3 cut(s)	739, 1437, 1458
AlwNI	CAGNNNCTG	1 cut(s)	1574
Ama87I	CYCGRG	1 cut(s)	1088
Aor51HI	AGCGCT	1 cut(s)	1140
AoxI	GGCC	4 cut(s)	308, 342, 911, 1463
ApeKI	GCWGC	4 cut(s)	698, 869, 951, 1190
ApoI	RAATTY	4 cut(s)	20, 367, 649, 1474
AspLEI	GCGC	5 cut(s)	334, 391, 486, 1074, 1141
AspS9I	GGNCC	2 cut(s)	308, 528
AsuC2I	CCSGG	1 cut(s)	281
AsuHPI	GGTGA	6 cut(s)	42, 220, 241, 1289, 1385, 1394
AsuNHI	GCTAGC	1 cut(s)	1093
AvaI	CYCGRG	1 cut(s)	1088
AvaII	GGWCC	1 cut(s)	528
BaeGI	GKGCMC	1 cut(s)	305
BanI	GGYRCC	1 cut(s)	1148
BanII	GRGCYC	3 cut(s)	207, 288, 711
BbsI	GAAGAC	2 cut(s)	283, 1623
Bbv12I	GWGCWC	2 cut(s)	126, 288
BbvI	GCAGC	4 cut(s)	685, 881, 963, 1177
BccI	CCATC	5 cut(s)	958, 991, 1030, 1206, 1516
BceAI	ACGGC	3 cut(s)	93, 639, 1140
BciVI	GTATCC	1 cut(s)	1169
BclI	TGATCA	2 cut(s)	970, 1030
BcnI	CCSGG	1 cut(s)	281
BcoDI	GTCTC	1 cut(s)	1094
BfaI	CTAG	2 cut(s)	143, 1094
BfmI	CTRYAG	3 cut(s)	702, 949, 1459
BfoI	RGCGCY	3 cut(s)	335, 1075, 1142
BfuAI	ACCTGC	2 cut(s)	166, 1370
BfuI	GTATCC	1 cut(s)	1169
BglII	AGATCT	1 cut(s)	114
BisI	GCNGC	5 cut(s)	377, 699, 870, 952, 1191
BlpI	GCTNAGC	1 cut(s)	206
BlsI	GCNGC	5 cut(s)	378, 700, 871, 953, 1192
Bme1390I	CCNGG	1 cut(s)	281
Bme18I	GGWCC	1 cut(s)	528
BmeT110I	CYCGRG	1 cut(s)	1088
BmgBI	CACGTC	2 cut(s)	148, 190
BmgT120I	GGNCC	2 cut(s)	308, 528
BmiI	GGNNCC	3 cut(s)	309, 1150, 1579
BmrFI	CCNGG	1 cut(s)	281
BmsI	GCATC	6 cut(s)	645, 766, 882, 1230, 1268, 1654
BmtI	GCTAGC	1 cut(s)	1097
BpiI	GAAGAC	2 cut(s)	283, 1623
Bpu1102I	GCTNAGC	1 cut(s)	206
BpuMI	CCSGG	1 cut(s)	281
BsaAI	YACGTR	1 cut(s)	430
Bsc4I	CCNNNNNNNGG	2 cut(s)	558, 1477
Bse118I	RCCGGY	1 cut(s)	310
Bse1I	ACTGG	2 cut(s)	640, 1545
Bse3DI	GCAATG	4 cut(s)	103, 205, 1176, 1556
BseGI	GGATG	4 cut(s)	520, 778, 969, 1504
BseLI	CCNNNNNNNGG	2 cut(s)	558, 1477
BseMI	GCAATG	4 cut(s)	103, 205, 1176, 1556
BseMII	CTCAG	3 cut(s)	84, 220, 1089
BseNI	ACTGG	2 cut(s)	640, 1545
BseSI	GKGCMC	1 cut(s)	305
BseXI	GCAGC	4 cut(s)	685, 881, 963, 1177
BseYI	CCCAGC	2 cut(s)	1067, 1341
BsgI	GTGCAG	1 cut(s)	1398
Bsh1236I	CGCG	1 cut(s)	959
BshFI	GGCC	4 cut(s)	310, 344, 913, 1465
BshNI	GGYRCC	1 cut(s)	1148
BsiHKAI	GWGCWC	2 cut(s)	126, 288
BsiHKCI	CYCGRG	1 cut(s)	1088
BsiSI	CCGG	3 cut(s)	281, 295, 311
BslFI	GGGAC	2 cut(s)	248, 593
BslI	CCNNNNNNNGG	2 cut(s)	558, 1477
BsmAI	GTCTC	1 cut(s)	1094
BsmFI	GGGAC	2 cut(s)	248, 593
BsmI	GAATGC	1 cut(s)	693
BsnI	GGCC	4 cut(s)	310, 344, 913, 1465
BsoBI	CYCGRG	1 cut(s)	1088
Bsp1286I	GDGCHC	5 cut(s)	126, 207, 288, 305, 711
Bsp143I	GATC	8 cut(s)	114, 402, 731, 970, 1030, 1429, 1450, 1590
Bsp1720I	GCTNAGC	1 cut(s)	206
BspACI	CCGC	5 cut(s)	65, 241, 376, 419, 959
BspANI	GGCC	4 cut(s)	310, 344, 913, 1465
BspCNI	CTCAG	3 cut(s)	85, 219, 1090
BspFNI	CGCG	1 cut(s)	959
BspHI	TCATGA	1 cut(s)	886
BspLI	GGNNCC	3 cut(s)	309, 1150, 1579
BspMAI	CTGCAG	1 cut(s)	953
BspMI	ACCTGC	2 cut(s)	166, 1370
BspOI	GCTAGC	1 cut(s)	1097
BspPI	GGATC	3 cut(s)	739, 1437, 1458
BspT107I	GGYRCC	1 cut(s)	1148
BsrDI	GCAATG	4 cut(s)	103, 205, 1176, 1556
BsrFI	RCCGGY	1 cut(s)	310
BsrI	ACTGG	2 cut(s)	640, 1545
BssAI	RCCGGY	1 cut(s)	310
BssMI	GATC	8 cut(s)	114, 402, 731, 970, 1030, 1429, 1450, 1590
Bst4CI	ACNGT	3 cut(s)	160, 397, 1622
Bst6I	CTCTTC	1 cut(s)	1362
BstBAI	YACGTR	1 cut(s)	430
BstC8I	GCNNGC	4 cut(s)	245, 949, 1095, 1153
BstDEI	CTNAG	4 cut(s)	93, 118, 206, 1098
BstF5I	GGATG	4 cut(s)	520, 778, 969, 1504
BstFNI	CGCG	1 cut(s)	959
BstH2I	RGCGCY	3 cut(s)	335, 1075, 1142
BstHHI	GCGC	5 cut(s)	334, 391, 486, 1074, 1141
BstKTI	GATC	8 cut(s)	117, 405, 734, 973, 1033, 1432, 1453, 1593
BstMAI	GTCTC	1 cut(s)	1094
BstMBI	GATC	8 cut(s)	114, 402, 731, 970, 1030, 1429, 1450, 1590
BstMWI	GCNNNNNNNGC	4 cut(s)	216, 253, 869, 1187
BstNSI	RCATGY	1 cut(s)	389
BstSCI	CCNGG	1 cut(s)	279
BstSFI	CTRYAG	3 cut(s)	702, 949, 1459
BstSLI	GKGCMC	1 cut(s)	305
BstUI	CGCG	1 cut(s)	959
BstV1I	GCAGC	4 cut(s)	685, 881, 963, 1177
BstV2I	GAAGAC	2 cut(s)	283, 1623
BstX2I	RGATCY	4 cut(s)	114, 731, 1429, 1450
BstYI	RGATCY	4 cut(s)	114, 731, 1429, 1450
BsuI	GTATCC	1 cut(s)	1169
BsuRI	GGCC	4 cut(s)	310, 344, 913, 1465
BtrI	CACGTC	2 cut(s)	148, 190
BtsCI	GGATG	4 cut(s)	520, 778, 969, 1504
BtsI	GCAGTG	1 cut(s)	855
BtsIMutI	CAGTG	2 cut(s)	855, 900
BveI	ACCTGC	2 cut(s)	166, 1370
Cac8I	GCNNGC	4 cut(s)	245, 949, 1095, 1153
CaiI	CAGNNNCTG	1 cut(s)	1574
CciI	TCATGA	1 cut(s)	886
CfoI	GCGC	5 cut(s)	334, 391, 486, 1074, 1141
Cfr10I	RCCGGY	1 cut(s)	310
Cfr13I	GGNCC	2 cut(s)	308, 528
Csp6I	GTAC	3 cut(s)	427, 751, 781
CspCI	CAANNNNNGTGG	2 cut(s)	328, 363
CviAII	CATG	9 cut(s)	167, 386, 442, 854, 887, 1121, 1625, 1633, 1686
CviQI	GTAC	3 cut(s)	427, 751, 781
DdeI	CTNAG	4 cut(s)	93, 118, 206, 1098
DpnI	GATC	8 cut(s)	116, 404, 733, 972, 1032, 1431, 1452, 1592
DpnII	GATC	8 cut(s)	114, 402, 731, 970, 1030, 1429, 1450, 1590
Eam1104I	CTCTTC	1 cut(s)	1362
EarI	CTCTTC	1 cut(s)	1362
EciI	GGCGGA	1 cut(s)	434
Ecl136II	GAGCTC	1 cut(s)	286
Eco147I	AGGCCT	1 cut(s)	344
Eco24I	GRGCYC	3 cut(s)	207, 288, 711
Eco47I	GGWCC	1 cut(s)	528
Eco47III	AGCGCT	1 cut(s)	1140
Eco53kI	GAGCTC	1 cut(s)	286
Eco88I	CYCGRG	1 cut(s)	1088
EcoICRI	GAGCTC	1 cut(s)	286
EcoRI	GAATTC	1 cut(s)	649
EcoT22I	ATGCAT	1 cut(s)	1261
EcoT38I	GRGCYC	3 cut(s)	207, 288, 711
FaeI	CATG	9 cut(s)	170, 389, 445, 857, 890, 1124, 1628, 1636, 1689
FaqI	GGGAC	2 cut(s)	248, 593
FatI	CATG	9 cut(s)	166, 385, 441, 853, 886, 1120, 1624, 1632, 1685
FauI	CCCGC	1 cut(s)	952
FbaI	TGATCA	2 cut(s)	970, 1030
FblI	GTMKAC	1 cut(s)	1050
Fnu4HI	GCNGC	5 cut(s)	377, 699, 870, 952, 1191
FokI	GGATG	4 cut(s)	527, 785, 976, 1511
FriOI	GRGCYC	3 cut(s)	207, 288, 711
Fsp4HI	GCNGC	5 cut(s)	377, 699, 870, 952, 1191
FspBI	CTAG	2 cut(s)	143, 1094
FspI	TGCGCA	1 cut(s)	390
GlaI	GCGC	5 cut(s)	333, 390, 485, 1073, 1140
GluI	GCNGC	5 cut(s)	377, 699, 870, 952, 1191
GsaI	CCCAGC	2 cut(s)	1071, 1345
HaeII	RGCGCY	3 cut(s)	335, 1075, 1142
HaeIII	GGCC	4 cut(s)	310, 344, 913, 1465
HapII	CCGG	3 cut(s)	281, 295, 311
HhaI	GCGC	5 cut(s)	334, 391, 486, 1074, 1141
Hin1II	CATG	9 cut(s)	170, 389, 445, 857, 890, 1124, 1628, 1636, 1689
Hin6I	GCGC	5 cut(s)	332, 389, 484, 1072, 1139
HinP1I	GCGC	5 cut(s)	332, 389, 484, 1072, 1139
HincII	GTYRAC	1 cut(s)	163
HindII	GTYRAC	1 cut(s)	163
HindIII	AAGCTT	1 cut(s)	44
HinfI	GANTC	5 cut(s)	97, 261, 569, 1390, 1571
HpaII	CCGG	3 cut(s)	281, 295, 311
HphI	GGTGA	6 cut(s)	42, 220, 241, 1289, 1385, 1394
Hpy166II	GTNNAC	6 cut(s)	163, 181, 321, 528, 621, 1051
Hpy188I	TCNGA	4 cut(s)	94, 260, 1320, 1678
Hpy188III	TCNNGA	5 cut(s)	143, 359, 794, 887, 1088
Hpy8I	GTNNAC	6 cut(s)	163, 181, 321, 528, 621, 1051
HpyAV	CCTTC	6 cut(s)	63, 88, 1263, 1411, 1639, 1655
HpyCH4III	ACNGT	3 cut(s)	160, 397, 1622
HpyCH4IV	ACGT	5 cut(s)	147, 189, 222, 323, 429
HpyF10VI	GCNNNNNNNGC	4 cut(s)	216, 253, 869, 1187
HpyF3I	CTNAG	4 cut(s)	93, 118, 206, 1098
HpySE526I	ACGT	5 cut(s)	147, 189, 222, 323, 429
Hsp92II	CATG	9 cut(s)	170, 389, 445, 857, 890, 1124, 1628, 1636, 1689
HspAI	GCGC	5 cut(s)	332, 389, 484, 1072, 1139
Ksp22I	TGATCA	2 cut(s)	970, 1030
Kzo9I	GATC	8 cut(s)	114, 402, 731, 970, 1030, 1429, 1450, 1590
LmnI	GCTCC	3 cut(s)	283, 765, 1136
Lsp1109I	GCAGC	4 cut(s)	685, 881, 963, 1177
LweI	GCATC	6 cut(s)	645, 766, 882, 1230, 1268, 1654
MaeI	CTAG	2 cut(s)	143, 1094
MaeII	ACGT	5 cut(s)	147, 189, 222, 323, 429
MaeIII	GTNAC	5 cut(s)	631, 922, 1015, 1391, 1653
MalI	GATC	8 cut(s)	116, 404, 733, 972, 1032, 1431, 1452, 1592
MboI	GATC	8 cut(s)	114, 402, 731, 970, 1030, 1429, 1450, 1590
MboII	GAAGA	6 cut(s)	283, 1091, 1379, 1424, 1514, 1628
MflI	RGATCY	4 cut(s)	114, 731, 1429, 1450
MhlI	GDGCHC	5 cut(s)	126, 207, 288, 305, 711
MluCI	AATT	7 cut(s)	20, 36, 367, 649, 1185, 1203, 1474
MlyI	GAGTC	3 cut(s)	270, 578, 1399
MmeI	TCCRAC	3 cut(s)	651, 1272, 1404
MnlI	CCTC	7 cut(s)	20, 570, 583, 658, 686, 1118, 1420
Mph1103I	ATGCAT	1 cut(s)	1261
MseI	TTAA	2 cut(s)	1413, 1587
MslI	CAYNNNNRTG	4 cut(s)	858, 1043, 1125, 1637
MspI	CCGG	3 cut(s)	281, 295, 311
MspR9I	CCNGG	1 cut(s)	281
Mva1269I	GAATGC	1 cut(s)	693
MvnI	CGCG	1 cut(s)	959
MwoI	GCNNNNNNNGC	4 cut(s)	216, 253, 869, 1187
NciI	CCSGG	1 cut(s)	281
NdeII	GATC	8 cut(s)	114, 402, 731, 970, 1030, 1429, 1450, 1590
NheI	GCTAGC	1 cut(s)	1093
NlaIII	CATG	9 cut(s)	170, 389, 445, 857, 890, 1124, 1628, 1636, 1689
NlaIV	GGNNCC	3 cut(s)	309, 1150, 1579
NmeAIII	GCCGAG	1 cut(s)	308
NmuCI	GTSAC	2 cut(s)	1015, 1391
NsbI	TGCGCA	1 cut(s)	390
NsiI	ATGCAT	1 cut(s)	1261
NspI	RCATGY	1 cut(s)	389
PaeR7I	CTCGAG	1 cut(s)	1088
PagI	TCATGA	1 cut(s)	886
PaqCI	CACCTGC	1 cut(s)	1370
PceI	AGGCCT	1 cut(s)	344
PctI	GAATGC	1 cut(s)	693
PfeI	GAWTC	2 cut(s)	97, 1571
PkrI	GCNGC	5 cut(s)	378, 700, 871, 953, 1192
PleI	GAGTC	3 cut(s)	269, 577, 1398
PpsI	GAGTC	3 cut(s)	269, 577, 1398
Ppu21I	YACGTR	1 cut(s)	430
Psp124BI	GAGCTC	1 cut(s)	288
PspFI	CCCAGC	2 cut(s)	1067, 1341
PspN4I	GGNNCC	3 cut(s)	309, 1150, 1579
PspPI	GGNCC	2 cut(s)	308, 528
PstI	CTGCAG	1 cut(s)	953
PstNI	CAGNNNCTG	1 cut(s)	1574
PsuI	RGATCY	4 cut(s)	114, 731, 1429, 1450
RsaI	GTAC	3 cut(s)	428, 752, 782
RsaNI	GTAC	3 cut(s)	427, 751, 781
RseI	CAYNNNNRTG	4 cut(s)	858, 1043, 1125, 1637
SacI	GAGCTC	1 cut(s)	288
SaqAI	TTAA	2 cut(s)	1413, 1587
SatI	GCNGC	5 cut(s)	377, 699, 870, 952, 1191
Sau3AI	GATC	8 cut(s)	114, 402, 731, 970, 1030, 1429, 1450, 1590
Sau96I	GGNCC	2 cut(s)	308, 528
SchI	GAGTC	3 cut(s)	270, 578, 1399
ScrFI	CCNGG	1 cut(s)	281
SduI	GDGCHC	5 cut(s)	126, 207, 288, 305, 711
SfaNI	GCATC	6 cut(s)	645, 766, 882, 1230, 1268, 1654
SfcI	CTRYAG	3 cut(s)	702, 949, 1459
Sfr274I	CTCGAG	1 cut(s)	1088
SinI	GGWCC	1 cut(s)	528
SlaI	CTCGAG	1 cut(s)	1088
SmiMI	CAYNNNNRTG	4 cut(s)	858, 1043, 1125, 1637
SmlI	CTYRAG	1 cut(s)	1088
SmoI	CTYRAG	1 cut(s)	1088
Sse9I	AATT	7 cut(s)	20, 36, 367, 649, 1185, 1203, 1474
SseBI	AGGCCT	1 cut(s)	344
SsiI	CCGC	5 cut(s)	65, 241, 376, 419, 959
SspI	AATATT	2 cut(s)	787, 1225
SspMI	CTAG	2 cut(s)	143, 1094
SstI	GAGCTC	1 cut(s)	288
StuI	AGGCCT	1 cut(s)	344
StyD4I	CCNGG	1 cut(s)	279
TaaI	ACNGT	3 cut(s)	160, 397, 1622
TaiI	ACGT	5 cut(s)	150, 192, 225, 326, 432
TaqI	TCGA	5 cut(s)	653, 711, 755, 1063, 1089
TaqII	GACCGA	1 cut(s)	545
TasI	AATT	7 cut(s)	20, 36, 367, 649, 1185, 1203, 1474
TatI	WGTACW	1 cut(s)	750
TauI	GCSGC	1 cut(s)	379
TfiI	GAWTC	2 cut(s)	97, 1571
Tru1I	TTAA	2 cut(s)	1413, 1587
Tru9I	TTAA	2 cut(s)	1413, 1587
TscAI	CASTG	2 cut(s)	855, 907
TseFI	GTSAC	2 cut(s)	1015, 1391
TseI	GCWGC	4 cut(s)	698, 869, 951, 1190
Tsp45I	GTSAC	2 cut(s)	1015, 1391
TspDTI	ATGAA	6 cut(s)	70, 513, 815, 875, 1515, 1621
TspGWI	ACGGA	2 cut(s)	1374, 1455
TspRI	CASTG	2 cut(s)	855, 907
VpaK11BI	GGWCC	1 cut(s)	528
XapI	RAATTY	4 cut(s)	20, 367, 649, 1474
XbaI	TCTAGA	1 cut(s)	142
XceI	RCATGY	1 cut(s)	389
XhoI	CTCGAG	1 cut(s)	1088
XmiI	GTMKAC	1 cut(s)	1050
XspI	CTAG	2 cut(s)	143, 1094
Zsp2I	ATGCAT	1 cut(s)	1261

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.