AT5G45340

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
18368532 .. 18371021
2490 bp
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UTR
Exon/CDS
Intron
AT5G45340.2

Sequence Viewer

Length: 1392 bp
ATGGATTTCTCCGGTTTGTTTCTCACTCTCTCCGCGGCGGCTCTGTTTCTCTGTTTACTCCGATTTATCGCCGGAGTCCGCCGTAGCTCCTCCACGAAACTCCCTCTTCCTCCGGGAACAATGGGTTATCCTTACGTCGGCGAAACATTCCAACTTTACTCACAAGACCCTAATGTGTTCTTTGCAGCAAAACAGAGAAGATACGGATCGGTGTTCAAGACTCATGTATTGGGATGTCCATGTGTGATGATCTCGAGCCCTGAAGCAGCGAAATTCGTATTGGTTACAAAGTCTCATTTGTTTAAACCGACTTTTCCGGCCAGTAAAGAGAGGATGCTTGGAAAACAAGCCATCTTCTTCCATCAAGGAGATTATCATTCCAAACTTAGAAAGCTTGTTTTAAGAGCTTTCATGCCTGATGCAATCAGAAACATGGTCCCTCACATTGAATCAATTGCTCAAGAATCACTCAATTCTTGGGATGGAACTCAACTCAACACTTACCAGGAAATGAAAACATACACTTTCAATGTTGCGTTAATCTCAATACTCGGCAAAGACGAAGTTTATTACCGAGAAGATCTAAAACGATGCTACTACATTCTAGAGAAAGGTTACAATTCGATGCCGATTAATCTTCCAGGAACATTATTCCACAAAGCCATGAAAGCTCGCAAGGAGCTAGCTCAAATCCTCGCTAACATCTTATCCAAAAGAAGACAAAACCCATCATCACACACAGATCTCCTCGGATCATTCATGGAAGACAAAGCAGGATTAACCGACGAACAAATCGCCGATAACATCATCGGAGTAATCTTCGCCGCAAGAGACACGACGGCGAGTGTTCTGACGTGGATCCTCAAGTACTTAGCTGATAATCCAACTGTTCTAGAAGCTGTCACTGAAGAGCAAATGGCAATAAGGAAAGATAAAAAAGAAGGAGAGAGTCTCACTTGGGAAGATACAAAGAAGATGCCATTAACTTATAGAGTAATCCAAGAGACATTAAGAGCTGCTACAATCTTATCTTTCACATTTAGAGAAGCTGTCGAAGATGTCGAATACGAAGGATATTTGATACCAAAGGGATGGAAAGTACTGCCACTATTCAGAAATATTCATCACAATGCTGATATATTTTCGGATCCGGGGAAATTCGATCCGTCGAGATTCGAAGTTGCGCCGAAACCGAATACATTCATGCCTTTTGGTAGTGGGATTCATTCTTGTCCAGGCAATGAGTTAGCTAAACTTGAAATCTCTGTTCTAATCCATCATCTCACCACTAAGTACAGATGGTCAATCGTAGGGCCTAGCGATGGAATTCAGTATGGGCCGTTCGCTCTTCCTCAGAATGGATTGCCTATTGCCTTGGAACGAAAACCATAG

Protein Analysis

463

Amino Acids

52.37

Weight (kDa)

9.0

Isoelectric Point (pI)

44.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 37 - 436 1.8e-75 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 35
AciI CCGC 5 cut(s) 33, 35, 38, 79, 825
AclWI GGATC 7 cut(s) 214, 760, 853, 866, 1142, 1155, 1157
AcoI YGGCCR 1 cut(s) 318
AcsI RAATTY 3 cut(s) 272, 1157, 1326
AcuI CTGAAG 2 cut(s) 282, 927
AfaI GTAC 3 cut(s) 869, 1101, 1295
AfiI CCNNNNNNNGG 3 cut(s) 137, 1322, 1358
AgsI TTSAA 4 cut(s) 217, 449, 529, 1259
AjiI CACGTC 1 cut(s) 855
AjnI CCWGG 3 cut(s) 504, 640, 1234
AjuI GAANNNNNNNTTGG 2 cut(s) 263, 295
Alw26I GTCTC 4 cut(s) 297, 825, 956, 998
AlwI GGATC 7 cut(s) 214, 760, 853, 866, 1142, 1155, 1157
Ama87I CYCGRG 1 cut(s) 253
AoxI GGCC 3 cut(s) 318, 1313, 1337
ApeKI GCWGC 3 cut(s) 185, 266, 1016
ApoI RAATTY 3 cut(s) 272, 1157, 1326
AseI ATTAAT 1 cut(s) 633
Asp700I GAANNNNTTC 1 cut(s) 1199
AspLEI GCGC 1 cut(s) 1186
AspS9I GGNCC 3 cut(s) 436, 1313, 1337
AsuC2I CCSGG 2 cut(s) 114, 1152
AsuHPI GGTGA 1 cut(s) 1276
AsuII TTCGAA 1 cut(s) 1176
AsuNHI GCTAGC 1 cut(s) 682
AvaI CYCGRG 1 cut(s) 253
AvaII GGWCC 1 cut(s) 436
BamHI GGATCC 2 cut(s) 858, 1147
BanII GRGCYC 1 cut(s) 260
BbsI GAAGAC 2 cut(s) 724, 771
BbvI GCAGC 3 cut(s) 197, 278, 1003
BccI CCATC 8 cut(s) 359, 369, 476, 736, 1086, 1284, 1293, 1316
BceAI ACGGC 3 cut(s) 66, 855, 1324
BciT130I CCWGG 3 cut(s) 506, 642, 1236
BcnI CCSGG 2 cut(s) 114, 1152
BcoDI GTCTC 4 cut(s) 297, 825, 956, 998
BfaI CTAG 4 cut(s) 605, 683, 893, 1317
BglII AGATCT 2 cut(s) 580, 742
BisI GCNGC 6 cut(s) 36, 39, 186, 267, 825, 1017
BlsI GCNGC 6 cut(s) 37, 40, 187, 268, 826, 1018
BmcAI AGTACT 2 cut(s) 869, 1101
Bme1390I CCNGG 5 cut(s) 114, 506, 642, 1152, 1236
Bme18I GGWCC 1 cut(s) 436
BmeT110I CYCGRG 1 cut(s) 253
BmgBI CACGTC 1 cut(s) 855
BmgT120I GGNCC 3 cut(s) 436, 1313, 1337
BmiI GGNNCC 3 cut(s) 438, 860, 1149
BmrFI CCNGG 5 cut(s) 114, 506, 642, 1152, 1236
BmsI GCATC 5 cut(s) 324, 409, 581, 615, 966
BmtI GCTAGC 1 cut(s) 686
BpiI GAAGAC 2 cut(s) 724, 771
BplI GAGNNNNNCTC 2 cut(s) 936, 968
Bpu14I TTCGAA 1 cut(s) 1176
BpuEI CTTGAG 2 cut(s) 444, 848
BpuMI CCSGG 2 cut(s) 114, 1152
BsaBI GATNNNNATC 1 cut(s) 205
BsaJI CCNNGG 4 cut(s) 33, 748, 1151, 1374
BsaWI WCCGGW 1 cut(s) 11
Bsc4I CCNNNNNNNGG 3 cut(s) 137, 1322, 1358
Bse1I ACTGG 1 cut(s) 321
Bse3DI GCAATG 1 cut(s) 1246
Bse8I GATNNNNATC 1 cut(s) 205
BseBI CCWGG 3 cut(s) 506, 642, 1236
BseDI CCNNGG 4 cut(s) 33, 748, 1151, 1374
BseGI GGATG 4 cut(s) 239, 339, 487, 1097
BseJI GATNNNNATC 1 cut(s) 205
BseLI CCNNNNNNNGG 3 cut(s) 137, 1322, 1358
BseMI GCAATG 1 cut(s) 1246
BseMII CTCAG 1 cut(s) 1367
BseNI ACTGG 1 cut(s) 321
BseRI GAGGAG 2 cut(s) 79, 737
BseXI GCAGC 3 cut(s) 197, 278, 1003
Bsh1236I CGCG 1 cut(s) 35
BshFI GGCC 3 cut(s) 320, 1315, 1339
BsiHKCI CYCGRG 1 cut(s) 253
BsiSI CCGG 5 cut(s) 12, 72, 113, 317, 1151
BslFI GGGAC 1 cut(s) 422
BslI CCNNNNNNNGG 3 cut(s) 137, 1322, 1358
BsmAI GTCTC 4 cut(s) 297, 825, 956, 998
BsmFI GGGAC 1 cut(s) 422
BsnI GGCC 3 cut(s) 320, 1315, 1339
BsoBI CYCGRG 1 cut(s) 253
Bsp119I TTCGAA 1 cut(s) 1176
Bsp1286I GDGCHC 1 cut(s) 260
Bsp143I GATC 8 cut(s) 206, 249, 580, 742, 752, 858, 1147, 1162
BspACI CCGC 5 cut(s) 33, 35, 38, 79, 825
BspANI GGCC 3 cut(s) 320, 1315, 1339
BspCNI CTCAG 1 cut(s) 1366
BspFNI CGCG 1 cut(s) 35
BspLI GGNNCC 3 cut(s) 438, 860, 1149
BspOI GCTAGC 1 cut(s) 686
BspPI GGATC 7 cut(s) 214, 760, 853, 866, 1142, 1155, 1157
BspQI GCTCTTC 2 cut(s) 903, 1353
BspT104I TTCGAA 1 cut(s) 1176
BsrDI GCAATG 1 cut(s) 1246
BsrI ACTGG 1 cut(s) 321
BssECI CCNNGG 4 cut(s) 33, 748, 1151, 1374
BssMI GATC 8 cut(s) 206, 249, 580, 742, 752, 858, 1147, 1162
BssT1I CCWWGG 1 cut(s) 1374
Bst2UI CCWGG 3 cut(s) 506, 642, 1236
Bst4CI ACNGT 1 cut(s) 889
Bst6I CTCTTC 3 cut(s) 111, 903, 1353
BstBI TTCGAA 1 cut(s) 1176
BstC8I GCNNGC 2 cut(s) 673, 684
BstDEI CTNAG 4 cut(s) 386, 871, 1290, 1353
BstDSI CCRYGG 1 cut(s) 33
BstF5I GGATG 4 cut(s) 239, 339, 487, 1097
BstFNI CGCG 1 cut(s) 35
BstHHI GCGC 1 cut(s) 1186
BstKTI GATC 8 cut(s) 209, 252, 583, 745, 755, 861, 1150, 1165
BstMAI GTCTC 4 cut(s) 297, 825, 956, 998
BstMBI GATC 8 cut(s) 206, 249, 580, 742, 752, 858, 1147, 1162
BstMWI GCNNNNNNNGC 1 cut(s) 668
BstNI CCWGG 3 cut(s) 506, 642, 1236
BstSCI CCNGG 5 cut(s) 112, 504, 640, 1150, 1234
BstUI CGCG 1 cut(s) 35
BstV1I GCAGC 3 cut(s) 197, 278, 1003
BstV2I GAAGAC 2 cut(s) 724, 771
BstX2I RGATCY 4 cut(s) 580, 742, 858, 1147
BstXI CCANNNNNNTGG 1 cut(s) 1092
BstYI RGATCY 4 cut(s) 580, 742, 858, 1147
BsuRI GGCC 3 cut(s) 320, 1315, 1339
BtgI CCRYGG 1 cut(s) 33
BtgZI GCGATG 1 cut(s) 1335
BtrI CACGTC 1 cut(s) 855
BtsCI GGATG 4 cut(s) 239, 339, 487, 1097
BtsIMutI CAGTG 1 cut(s) 903
Cac8I GCNNGC 2 cut(s) 673, 684
CfoI GCGC 1 cut(s) 1186
Cfr13I GGNCC 3 cut(s) 436, 1313, 1337
Cfr42I CCGCGG 1 cut(s) 36
Csp6I GTAC 3 cut(s) 868, 1100, 1294
CviAII CATG 7 cut(s) 224, 240, 412, 433, 664, 760, 1204
CviQI GTAC 3 cut(s) 868, 1100, 1294
DdeI CTNAG 4 cut(s) 386, 871, 1290, 1353
DpnI GATC 8 cut(s) 208, 251, 582, 744, 754, 860, 1149, 1164
DpnII GATC 8 cut(s) 206, 249, 580, 742, 752, 858, 1147, 1162
DraI TTTAAA 1 cut(s) 304
EaeI YGGCCR 1 cut(s) 318
Eam1104I CTCTTC 3 cut(s) 111, 903, 1353
EarI CTCTTC 3 cut(s) 111, 903, 1353
EciI GGCGGA 1 cut(s) 68
Eco130I CCWWGG 1 cut(s) 1374
Eco24I GRGCYC 1 cut(s) 260
Eco47I GGWCC 1 cut(s) 436
Eco57I CTGAAG 2 cut(s) 282, 927
Eco88I CYCGRG 1 cut(s) 253
EcoO109I RGGNCCY 1 cut(s) 1313
EcoRI GAATTC 1 cut(s) 1326
EcoRII CCWGG 3 cut(s) 504, 640, 1234
EcoT14I CCWWGG 1 cut(s) 1374
EcoT38I GRGCYC 1 cut(s) 260
ErhI CCWWGG 1 cut(s) 1374
FaeI CATG 7 cut(s) 227, 243, 415, 436, 667, 763, 1207
FaqI GGGAC 1 cut(s) 422
FatI CATG 7 cut(s) 223, 239, 411, 432, 663, 759, 1203
Fnu4HI GCNGC 6 cut(s) 36, 39, 186, 267, 825, 1017
FokI GGATG 4 cut(s) 246, 346, 494, 1104
FriOI GRGCYC 1 cut(s) 260
Fsp4HI GCNGC 6 cut(s) 36, 39, 186, 267, 825, 1017
FspBI CTAG 4 cut(s) 605, 683, 893, 1317
GlaI GCGC 1 cut(s) 1185
GluI GCNGC 6 cut(s) 36, 39, 186, 267, 825, 1017
HaeIII GGCC 3 cut(s) 320, 1315, 1339
HapII CCGG 5 cut(s) 12, 72, 113, 317, 1151
HhaI GCGC 1 cut(s) 1186
Hin1II CATG 7 cut(s) 227, 243, 415, 436, 667, 763, 1207
Hin6I GCGC 1 cut(s) 1184
HinP1I GCGC 1 cut(s) 1184
HindIII AAGCTT 1 cut(s) 392
HinfI GANTC 7 cut(s) 75, 220, 449, 464, 949, 1173, 1222
HpaII CCGG 5 cut(s) 12, 72, 113, 317, 1151
HphI GGTGA 1 cut(s) 1276
Hpy166II GTNNAC 1 cut(s) 56
Hpy188I TCNGA 8 cut(s) 62, 428, 752, 812, 852, 1115, 1147, 1356
Hpy188III TCNNGA 6 cut(s) 217, 253, 461, 605, 893, 1170
Hpy8I GTNNAC 1 cut(s) 56
Hpy99I CGWCG 4 cut(s) 140, 788, 841, 1171
HpyAV CCTTC 2 cut(s) 935, 1064
HpyCH4III ACNGT 1 cut(s) 889
HpyCH4IV ACGT 2 cut(s) 135, 854
HpyCH4V TGCA 2 cut(s) 185, 422
HpyF10VI GCNNNNNNNGC 1 cut(s) 668
HpyF3I CTNAG 4 cut(s) 386, 871, 1290, 1353
HpySE526I ACGT 2 cut(s) 135, 854
Hsp92II CATG 7 cut(s) 227, 243, 415, 436, 667, 763, 1207
HspAI GCGC 1 cut(s) 1184
KspI CCGCGG 1 cut(s) 36
Kzo9I GATC 8 cut(s) 206, 249, 580, 742, 752, 858, 1147, 1162
LguI GCTCTTC 2 cut(s) 903, 1353
LmnI GCTCC 2 cut(s) 92, 679
Lsp1109I GCAGC 3 cut(s) 197, 278, 1003
LweI GCATC 5 cut(s) 324, 409, 581, 615, 966
MaeI CTAG 4 cut(s) 605, 683, 893, 1317
MaeII ACGT 2 cut(s) 135, 854
MaeIII GTNAC 3 cut(s) 283, 614, 901
MalI GATC 8 cut(s) 208, 251, 582, 744, 754, 860, 1149, 1164
MboI GATC 8 cut(s) 206, 249, 580, 742, 752, 858, 1147, 1162
MfeI CAATTG 1 cut(s) 453
MflI RGATCY 4 cut(s) 580, 742, 858, 1147
MhlI GDGCHC 1 cut(s) 260
MluCI AATT 6 cut(s) 272, 453, 472, 619, 1157, 1326
MlyI GAGTC 3 cut(s) 84, 214, 958
MmeI TCCRAC 2 cut(s) 175, 908
MnlI CCTC 9 cut(s) 100, 114, 120, 324, 450, 704, 758, 872, 1362
MroXI GAANNNNTTC 1 cut(s) 1199
MseI TTAA 7 cut(s) 303, 401, 539, 633, 779, 983, 1010
MslI CAYNNNNRTG 1 cut(s) 1128
MspA1I CMGCKG 1 cut(s) 35
MspI CCGG 5 cut(s) 12, 72, 113, 317, 1151
MspR9I CCNGG 5 cut(s) 114, 506, 642, 1152, 1236
MssI GTTTAAAC 1 cut(s) 304
MunI CAATTG 1 cut(s) 453
MvaI CCWGG 3 cut(s) 506, 642, 1236
MvnI CGCG 1 cut(s) 35
MwoI GCNNNNNNNGC 1 cut(s) 668
NciI CCSGG 2 cut(s) 114, 1152
NdeII GATC 8 cut(s) 206, 249, 580, 742, 752, 858, 1147, 1162
NheI GCTAGC 1 cut(s) 682
NlaIII CATG 7 cut(s) 227, 243, 415, 436, 667, 763, 1207
NlaIV GGNNCC 3 cut(s) 438, 860, 1149
NmeAIII GCCGAG 1 cut(s) 531
NmuCI GTSAC 1 cut(s) 901
NspV TTCGAA 1 cut(s) 1176
PaeR7I CTCGAG 1 cut(s) 253
PciSI GCTCTTC 2 cut(s) 903, 1353
PcsI WCGNNNNNNNCGW 2 cut(s) 558, 1059
PdmI GAANNNNTTC 1 cut(s) 1199
PfeI GAWTC 4 cut(s) 449, 464, 1173, 1222
PfoI TCCNGGA 2 cut(s) 112, 640
PkrI GCNGC 6 cut(s) 37, 40, 187, 268, 826, 1018
PleI GAGTC 3 cut(s) 83, 214, 957
PmeI GTTTAAAC 1 cut(s) 304
PpsI GAGTC 3 cut(s) 83, 214, 957
PshBI ATTAAT 1 cut(s) 633
Psp6I CCWGG 3 cut(s) 504, 640, 1234
PspGI CCWGG 3 cut(s) 504, 640, 1234
PspN4I GGNNCC 3 cut(s) 438, 860, 1149
PspPI GGNCC 3 cut(s) 436, 1313, 1337
PsrI GAACNNNNNNTAC 2 cut(s) 1325, 1357
PsuI RGATCY 4 cut(s) 580, 742, 858, 1147
RsaI GTAC 3 cut(s) 869, 1101, 1295
RsaNI GTAC 3 cut(s) 868, 1100, 1294
RseI CAYNNNNRTG 1 cut(s) 1128
SacII CCGCGG 1 cut(s) 36
SapI GCTCTTC 2 cut(s) 903, 1353
SaqAI TTAA 7 cut(s) 303, 401, 539, 633, 779, 983, 1010
SatI GCNGC 6 cut(s) 36, 39, 186, 267, 825, 1017
Sau3AI GATC 8 cut(s) 206, 249, 580, 742, 752, 858, 1147, 1162
Sau96I GGNCC 3 cut(s) 436, 1313, 1337
ScaI AGTACT 2 cut(s) 869, 1101
SchI GAGTC 3 cut(s) 84, 214, 958
ScrFI CCNGG 5 cut(s) 114, 506, 642, 1152, 1236
SduI GDGCHC 1 cut(s) 260
SfaNI GCATC 5 cut(s) 324, 409, 581, 615, 966
Sfr274I CTCGAG 1 cut(s) 253
Sfr303I CCGCGG 1 cut(s) 36
SfuI TTCGAA 1 cut(s) 1176
SgrBI CCGCGG 1 cut(s) 36
SinI GGWCC 1 cut(s) 436
SlaI CTCGAG 1 cut(s) 253
SmiMI CAYNNNNRTG 1 cut(s) 1128
SmlI CTYRAG 3 cut(s) 253, 459, 863
SmoI CTYRAG 3 cut(s) 253, 459, 863
Sse9I AATT 6 cut(s) 272, 453, 472, 619, 1157, 1326
SsiI CCGC 5 cut(s) 33, 35, 38, 79, 825
SspI AATATT 1 cut(s) 1120
SspMI CTAG 4 cut(s) 605, 683, 893, 1317
StyD4I CCNGG 5 cut(s) 112, 504, 640, 1150, 1234
StyI CCWWGG 1 cut(s) 1374
TaaI ACNGT 1 cut(s) 889
TaiI ACGT 2 cut(s) 138, 857
TaqI TCGA 7 cut(s) 254, 623, 1053, 1062, 1161, 1169, 1176
TasI AATT 6 cut(s) 272, 453, 472, 619, 1157, 1326
TatI WGTACW 3 cut(s) 867, 1099, 1293
TauI GCSGC 3 cut(s) 38, 41, 827
TfiI GAWTC 4 cut(s) 449, 464, 1173, 1222
Tru1I TTAA 7 cut(s) 303, 401, 539, 633, 779, 983, 1010
Tru9I TTAA 7 cut(s) 303, 401, 539, 633, 779, 983, 1010
TscAI CASTG 1 cut(s) 910
TseFI GTSAC 1 cut(s) 901
TseI GCWGC 3 cut(s) 185, 266, 1016
Tsp45I GTSAC 1 cut(s) 901
TspDTI ATGAA 7 cut(s) 400, 527, 680, 748, 1112, 1192, 1214
TspGWI ACGGA 2 cut(s) 219, 1155
TspRI CASTG 1 cut(s) 910
VpaK11BI GGWCC 1 cut(s) 436
VspI ATTAAT 1 cut(s) 633
XapI RAATTY 3 cut(s) 272, 1157, 1326
XbaI TCTAGA 2 cut(s) 604, 892
XhoI CTCGAG 1 cut(s) 253
XmnI GAANNNNTTC 1 cut(s) 1199
XspI CTAG 4 cut(s) 605, 683, 893, 1317
ZrmI AGTACT 2 cut(s) 869, 1101
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.