MD06G1010900.v1.1

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
Physical Location & Seq
Forward (+)
1314301 .. 1317373
3073 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1010900.v1.1.491

Sequence Viewer

Length: 1431 bp
ATGGAATCGAATATCTTGAACTCCATGTTCTGCATCTTTGCCTTTGTTGTCTTCTTCCTCTTTGTCATCAATTCCCTCATCACCAAGCTCTTCACTCCTAACCGCCGGAAAATCCCACTTCCGCCGGGTTCCTTAGGCTGGCCTTACATTGGAGAAACCTTCCAACTCTACTCTCAAAACCCAAATGTCTTCTTTGCCTCAAAACAAAAGAGGTTTGGGTCAATCTTCAAAACCCACATCTTGGGTTGTCCCTGTGTGATGATTTCGAGGCCCGAAGCGGCGAAATTTGTGCTTTCTCGAGCCCATCTGTTCAAGCCAACTTTTCCGGCGAGCAAAGAGAGGATGTTGGGGAAAGAAGCCATCTTTTTCCACCAAGGAGATTACCATGCCAAATTGAGAAAGCTTGTCCTCCGTGCCTTCATGCCGGAAGCCATCAGAAGTATCGTCCCTGACATTGAATCCATTGCCAAAGACTCTCTCAAGTCCTGCCAAGGCCGCTTGATCAACACCTTCCAAGAAATGAAAACGTTCACATTCAATGTTGCACTCCTTTCTATATTTGGTAAGGATGAGATTCTGTACAGAGAGGATCTGAAGAGGTGCTACTACATTCTTGAGAAGGGTTACAATTCAATGCCCATTAATCTTCCAGGCACACTGTTTCACAAATCAATGAAAGCAAGGAAGGAGCTGGCTCAGATCTTGGCCAAAATTATATCTACAAGGAGGCAAAGGATGCAGTTAGAGGAGGAGGACCATAAGGATCTTCTGGGATCATTCATGGGTGACAAAGAAGGCCTCACTGACCAACAAATTGCCGACAACGTCATTGGGGTCGTCTTCGCTGCCCGTGACACCACAGCCAGCGTCTTGACTTGGATTGTCAAGTACCTTGGGGAAAACCCAAGCGTTCTTCAAGCTGTCACTGAAGAGCAAGAAGCAATAATAAGGTCAAAAGAAGAAGAAGAAGAAGAGGAGAAAGTTCTGAGTTGGGCAGATACCAAAAAGATGCCCTTGACTTGTAGAGTGATTCAGGAGACACTAAGAGTTGCTTCCATTTTGTCTTTCACTTTCAGGGAAGCTGTGGAGGATGTTGAATATGAAGGTTATCTGATACCAAAAGGGTGGAAAGTTTTACCACTTTTCAGAAACATTCACCACAGCCCAGAAATTTTTCCTGACCCTGACAAATTTGATCCCTCCAGGTTTGAGATTGCTCCAAAACCCAATACCTACATGCCATTTGGTAGCGGGACCCACGCATGTCCAGGGAACGAATTAGCCAAGCTGGAGATTTTGGTCTTTTTACACCATCTAACAACAAAGTACAGGTGGTCTATGGTTGGTGCACAAAATGGCATACAGTATGGCCCTTTTGCTCTTCCCCATAATGGCCTGCCCATCAGATTATCTCCTAAAACTATCATATAA

Protein Analysis

477

Amino Acids

54.45

Weight (kDa)

8.93

Isoelectric Point (pI)

50.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 41 - 448 6.7e-76 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 241
AciI CCGC 5 cut(s) 103, 122, 278, 496, 1251
AclI AACGTT 1 cut(s) 527
AclWI GGATC 4 cut(s) 597, 771, 781, 1190
AcoI YGGCCR 1 cut(s) 705
AcsI RAATTY 3 cut(s) 284, 1170, 1190
AcuI CTGAAG 2 cut(s) 614, 948
AfaI GTAC 3 cut(s) 581, 890, 1328
AfiI CCNNNNNNNGG 4 cut(s) 138, 149, 241, 1391
AgsI TTSAA 8 cut(s) 19, 229, 313, 458, 538, 633, 917, 1097
AjnI CCWGG 3 cut(s) 649, 1202, 1267
AluBI AGCT 6 cut(s) 88, 403, 691, 920, 1082, 1288
AluI AGCT 6 cut(s) 88, 403, 691, 920, 1082, 1288
Alw21I GWGCWC 1 cut(s) 1351
Alw26I GTCTC 1 cut(s) 1031
Alw44I GTGCAC 1 cut(s) 1347
AlwI GGATC 4 cut(s) 597, 771, 781, 1190
Ama87I CYCGRG 1 cut(s) 297
AoxI GGCC 7 cut(s) 140, 269, 493, 705, 796, 1369, 1393
ApaLI GTGCAC 1 cut(s) 1347
ApeKI GCWGC 1 cut(s) 845
ApoI RAATTY 3 cut(s) 284, 1170, 1190
AseI ATTAAT 1 cut(s) 642
Asp700I GAANNNNTTC 2 cut(s) 527, 1173
AspS9I GGNCC 4 cut(s) 270, 754, 1254, 1370
AsuC2I CCSGG 1 cut(s) 126
AsuHPI GGTGA 3 cut(s) 73, 797, 1148
AvaI CYCGRG 1 cut(s) 297
AvaII GGWCC 2 cut(s) 754, 1254
AxyI CCTNAGG 1 cut(s) 133
BaeGI GKGCMC 1 cut(s) 1351
BalI TGGCCA 1 cut(s) 707
BanII GRGCYC 1 cut(s) 304
BarI GAAGNNNNNNTAC 2 cut(s) 587, 619
BbsI GAAGAC 3 cut(s) 43, 181, 832
Bbv12I GWGCWC 1 cut(s) 1351
BbvI GCAGC 1 cut(s) 832
BccI CCATC 5 cut(s) 312, 368, 440, 1320, 1409
BcgI CGANNNNNNTGC 2 cut(s) 271, 305
BciT130I CCWGG 3 cut(s) 651, 1204, 1269
BclI TGATCA 1 cut(s) 501
BcnI CCSGG 1 cut(s) 126
BcoDI GTCTC 1 cut(s) 1031
BglII AGATCT 1 cut(s) 699
BisI GCNGC 3 cut(s) 279, 496, 846
BlsI GCNGC 3 cut(s) 280, 497, 847
Bme1390I CCNGG 4 cut(s) 126, 651, 1204, 1269
Bme18I GGWCC 2 cut(s) 754, 1254
BmeT110I CYCGRG 1 cut(s) 297
BmgT120I GGNCC 4 cut(s) 270, 754, 1254, 1370
BmiI GGNNCC 3 cut(s) 130, 1255, 1256
BmrFI CCNGG 4 cut(s) 126, 651, 1204, 1269
BmsI GCATC 3 cut(s) 42, 726, 999
BpiI GAAGAC 3 cut(s) 43, 181, 832
BpmI CTGGAG 2 cut(s) 1186, 1310
BpuEI CTTGAG 2 cut(s) 464, 635
BpuMI CCSGG 1 cut(s) 126
BsaJI CCNNGG 4 cut(s) 373, 490, 892, 1268
Bsc4I CCNNNNNNNGG 4 cut(s) 138, 149, 241, 1391
Bse21I CCTNAGG 1 cut(s) 133
Bse3DI GCAATG 1 cut(s) 462
BseBI CCWGG 3 cut(s) 651, 1204, 1269
BseDI CCNNGG 4 cut(s) 373, 490, 892, 1268
BseGI GGATG 4 cut(s) 348, 574, 741, 1096
BseLI CCNNNNNNNGG 4 cut(s) 138, 149, 241, 1391
BseMI GCAATG 1 cut(s) 462
BseMII CTCAG 2 cut(s) 710, 977
BseRI GAGGAG 3 cut(s) 761, 764, 989
BseSI GKGCMC 1 cut(s) 1351
BseXI GCAGC 1 cut(s) 832
BshFI GGCC 7 cut(s) 142, 271, 495, 707, 798, 1371, 1395
BsiHKAI GWGCWC 1 cut(s) 1351
BsiHKCI CYCGRG 1 cut(s) 297
BsiSI CCGG 4 cut(s) 106, 125, 326, 425
BslFI GGGAC 3 cut(s) 234, 431, 1267
BslI CCNNNNNNNGG 4 cut(s) 138, 149, 241, 1391
BsmAI GTCTC 1 cut(s) 1031
BsmFI GGGAC 3 cut(s) 234, 431, 1267
BsnI GGCC 7 cut(s) 142, 271, 495, 707, 798, 1371, 1395
BsoBI CYCGRG 1 cut(s) 297
Bsp1286I GDGCHC 2 cut(s) 304, 1351
Bsp1407I TGTACA 1 cut(s) 579
Bsp143I GATC 6 cut(s) 501, 589, 699, 763, 773, 1195
BspACI CCGC 5 cut(s) 103, 122, 278, 496, 1251
BspANI GGCC 7 cut(s) 142, 271, 495, 707, 798, 1371, 1395
BspCNI CTCAG 2 cut(s) 709, 978
BspLI GGNNCC 3 cut(s) 130, 1255, 1256
BspPI GGATC 4 cut(s) 597, 771, 781, 1190
BspQI GCTCTTC 3 cut(s) 95, 924, 1386
BsrDI GCAATG 1 cut(s) 462
BsrGI TGTACA 1 cut(s) 579
BssECI CCNNGG 4 cut(s) 373, 490, 892, 1268
BssMI GATC 6 cut(s) 501, 589, 699, 763, 773, 1195
BssT1I CCWWGG 3 cut(s) 373, 490, 892
Bst2UI CCWGG 3 cut(s) 651, 1204, 1269
Bst4CI ACNGT 2 cut(s) 660, 1365
Bst6I CTCTTC 5 cut(s) 95, 590, 924, 966, 1386
BstAPI GCANNNNNTGC 1 cut(s) 736
BstAUI TGTACA 1 cut(s) 579
BstC8I GCNNGC 5 cut(s) 140, 331, 693, 865, 1397
BstDEI CTNAG 4 cut(s) 133, 696, 986, 1043
BstF5I GGATG 4 cut(s) 348, 574, 741, 1096
BstKTI GATC 6 cut(s) 504, 592, 702, 766, 776, 1198
BstMAI GTCTC 1 cut(s) 1031
BstMBI GATC 6 cut(s) 501, 589, 699, 763, 773, 1195
BstMWI GCNNNNNNNGC 2 cut(s) 495, 736
BstNI CCWGG 3 cut(s) 651, 1204, 1269
BstNSI RCATGY 2 cut(s) 1240, 1266
BstSCI CCNGG 4 cut(s) 124, 649, 1202, 1267
BstSLI GKGCMC 1 cut(s) 1351
BstV1I GCAGC 1 cut(s) 832
BstV2I GAAGAC 3 cut(s) 43, 181, 832
BstX2I RGATCY 3 cut(s) 589, 699, 763
BstXI CCANNNNNNTGG 1 cut(s) 1125
BstYI RGATCY 3 cut(s) 589, 699, 763
Bsu36I CCTNAGG 1 cut(s) 133
BsuRI GGCC 7 cut(s) 142, 271, 495, 707, 798, 1371, 1395
BtsCI GGATG 4 cut(s) 348, 574, 741, 1096
BtsIMutI CAGTG 3 cut(s) 656, 801, 924
Cac8I GCNNGC 5 cut(s) 140, 331, 693, 865, 1397
Cfr13I GGNCC 4 cut(s) 270, 754, 1254, 1370
CseI GACGC 1 cut(s) 856
Csp6I GTAC 3 cut(s) 580, 889, 1327
CviAII CATG 6 cut(s) 25, 386, 421, 781, 1237, 1263
CviQI GTAC 3 cut(s) 580, 889, 1327
DdeI CTNAG 4 cut(s) 133, 696, 986, 1043
DpnI GATC 6 cut(s) 503, 591, 701, 765, 775, 1197
DpnII GATC 6 cut(s) 501, 589, 699, 763, 773, 1195
EaeI YGGCCR 1 cut(s) 705
Eam1104I CTCTTC 5 cut(s) 95, 590, 924, 966, 1386
EarI CTCTTC 5 cut(s) 95, 590, 924, 966, 1386
EciI GGCGGA 1 cut(s) 111
Eco130I CCWWGG 3 cut(s) 373, 490, 892
Eco147I AGGCCT 1 cut(s) 798
Eco24I GRGCYC 1 cut(s) 304
Eco47I GGWCC 2 cut(s) 754, 1254
Eco57I CTGAAG 2 cut(s) 614, 948
Eco81I CCTNAGG 1 cut(s) 133
Eco88I CYCGRG 1 cut(s) 297
EcoO109I RGGNCCY 1 cut(s) 1254
EcoRII CCWGG 3 cut(s) 649, 1202, 1267
EcoT14I CCWWGG 3 cut(s) 373, 490, 892
EcoT38I GRGCYC 1 cut(s) 304
ErhI CCWWGG 3 cut(s) 373, 490, 892
FaeI CATG 6 cut(s) 28, 389, 424, 784, 1240, 1266
FalI AAGNNNNNCTT 4 cut(s) 998, 1030, 1036, 1068
FaqI GGGAC 3 cut(s) 234, 431, 1267
FatI CATG 6 cut(s) 24, 385, 420, 780, 1236, 1262
FauI CCCGC 1 cut(s) 1244
FbaI TGATCA 1 cut(s) 501
Fnu4HI GCNGC 3 cut(s) 279, 496, 846
FokI GGATG 4 cut(s) 355, 581, 748, 1103
FriOI GRGCYC 1 cut(s) 304
Fsp4HI GCNGC 3 cut(s) 279, 496, 846
GluI GCNGC 3 cut(s) 279, 496, 846
GsuI CTGGAG 2 cut(s) 1186, 1310
HaeIII GGCC 7 cut(s) 142, 271, 495, 707, 798, 1371, 1395
HapII CCGG 4 cut(s) 106, 125, 326, 425
HgaI GACGC 1 cut(s) 856
Hin1II CATG 6 cut(s) 28, 389, 424, 784, 1240, 1266
HindIII AAGCTT 1 cut(s) 401
HinfI GANTC 5 cut(s) 5, 458, 473, 574, 1030
HpaII CCGG 4 cut(s) 106, 125, 326, 425
HphI GGTGA 3 cut(s) 73, 797, 1148
Hpy166II GTNNAC 2 cut(s) 531, 1349
Hpy188I TCNGA 7 cut(s) 437, 594, 699, 987, 1113, 1148, 1406
Hpy188III TCNNGA 6 cut(s) 16, 297, 614, 871, 1034, 1178
Hpy8I GTNNAC 2 cut(s) 531, 1349
HpyAV CCTTC 7 cut(s) 169, 427, 520, 613, 679, 788, 1097
HpyCH4III ACNGT 2 cut(s) 660, 1365
HpyCH4IV ACGT 2 cut(s) 527, 825
HpyCH4V TGCA 4 cut(s) 33, 545, 739, 1349
HpyF10VI GCNNNNNNNGC 2 cut(s) 495, 736
HpyF3I CTNAG 4 cut(s) 133, 696, 986, 1043
HpySE526I ACGT 2 cut(s) 527, 825
Hsp92II CATG 6 cut(s) 28, 389, 424, 784, 1240, 1266
KflI GGGWCCC 1 cut(s) 1254
Ksp22I TGATCA 1 cut(s) 501
Kzo9I GATC 6 cut(s) 501, 589, 699, 763, 773, 1195
LguI GCTCTTC 3 cut(s) 95, 924, 1386
LmnI GCTCC 2 cut(s) 688, 1222
Lsp1109I GCAGC 1 cut(s) 832
LweI GCATC 3 cut(s) 42, 726, 999
MaeII ACGT 2 cut(s) 527, 825
MaeIII GTNAC 4 cut(s) 623, 785, 851, 922
MalI GATC 6 cut(s) 503, 591, 701, 765, 775, 1197
MboI GATC 6 cut(s) 501, 589, 699, 763, 773, 1195
MflI RGATCY 3 cut(s) 589, 699, 763
MhlI GDGCHC 2 cut(s) 304, 1351
MlsI TGGCCA 1 cut(s) 707
MluCI AATT 9 cut(s) 70, 284, 392, 628, 711, 813, 1170, 1190, 1277
MluNI TGGCCA 1 cut(s) 707
MlyI GAGTC 1 cut(s) 467
MmeI TCCRAC 1 cut(s) 187
Mox20I TGGCCA 1 cut(s) 707
MroXI GAANNNNTTC 2 cut(s) 527, 1173
MscI TGGCCA 1 cut(s) 707
MseI TTAA 1 cut(s) 642
Msp20I TGGCCA 1 cut(s) 707
MspI CCGG 4 cut(s) 106, 125, 326, 425
MspR9I CCNGG 4 cut(s) 126, 651, 1204, 1269
MvaI CCWGG 3 cut(s) 651, 1204, 1269
MwoI GCNNNNNNNGC 2 cut(s) 495, 736
NciI CCSGG 1 cut(s) 126
NdeII GATC 6 cut(s) 501, 589, 699, 763, 773, 1195
NlaIII CATG 6 cut(s) 28, 389, 424, 784, 1240, 1266
NlaIV GGNNCC 3 cut(s) 130, 1255, 1256
NmuCI GTSAC 3 cut(s) 785, 851, 922
NspI RCATGY 2 cut(s) 1240, 1266
PaeR7I CTCGAG 1 cut(s) 297
PceI AGGCCT 1 cut(s) 798
PciSI GCTCTTC 3 cut(s) 95, 924, 1386
PdmI GAANNNNTTC 2 cut(s) 527, 1173
PfeI GAWTC 4 cut(s) 5, 458, 574, 1030
PflFI GACNNNGTC 1 cut(s) 824
PflMI CCANNNNNTGG 1 cut(s) 241
PkrI GCNGC 3 cut(s) 280, 497, 847
PleI GAGTC 1 cut(s) 467
PpsI GAGTC 1 cut(s) 467
PpuMI RGGWCCY 1 cut(s) 1254
PshBI ATTAAT 1 cut(s) 642
Psp1406I AACGTT 1 cut(s) 527
Psp5II RGGWCCY 1 cut(s) 1254
Psp6I CCWGG 3 cut(s) 649, 1202, 1267
PspGI CCWGG 3 cut(s) 649, 1202, 1267
PspN4I GGNNCC 3 cut(s) 130, 1255, 1256
PspPI GGNCC 4 cut(s) 270, 754, 1254, 1370
PspPPI RGGWCCY 1 cut(s) 1254
PsuI RGATCY 3 cut(s) 589, 699, 763
PsyI GACNNNGTC 1 cut(s) 824
RsaI GTAC 3 cut(s) 581, 890, 1328
RsaNI GTAC 3 cut(s) 580, 889, 1327
SapI GCTCTTC 3 cut(s) 95, 924, 1386
SaqAI TTAA 1 cut(s) 642
SatI GCNGC 3 cut(s) 279, 496, 846
Sau3AI GATC 6 cut(s) 501, 589, 699, 763, 773, 1195
Sau96I GGNCC 4 cut(s) 270, 754, 1254, 1370
SchI GAGTC 1 cut(s) 467
ScrFI CCNGG 4 cut(s) 126, 651, 1204, 1269
SduI GDGCHC 2 cut(s) 304, 1351
SfaNI GCATC 3 cut(s) 42, 726, 999
Sfr274I CTCGAG 1 cut(s) 297
SinI GGWCC 2 cut(s) 754, 1254
SlaI CTCGAG 1 cut(s) 297
SmlI CTYRAG 3 cut(s) 297, 479, 614
SmoI CTYRAG 3 cut(s) 297, 479, 614
Sse9I AATT 9 cut(s) 70, 284, 392, 628, 711, 813, 1170, 1190, 1277
SseBI AGGCCT 1 cut(s) 798
SsiI CCGC 5 cut(s) 103, 122, 278, 496, 1251
StuI AGGCCT 1 cut(s) 798
StyD4I CCNGG 4 cut(s) 124, 649, 1202, 1267
StyI CCWWGG 3 cut(s) 373, 490, 892
TaaI ACNGT 2 cut(s) 660, 1365
TaiI ACGT 2 cut(s) 530, 828
TaqI TCGA 3 cut(s) 8, 266, 298
TasI AATT 9 cut(s) 70, 284, 392, 628, 711, 813, 1170, 1190, 1277
TatI WGTACW 2 cut(s) 579, 1326
TauI GCSGC 2 cut(s) 281, 498
TfiI GAWTC 4 cut(s) 5, 458, 574, 1030
Tru1I TTAA 1 cut(s) 642
Tru9I TTAA 1 cut(s) 642
TscAI CASTG 3 cut(s) 663, 808, 931
TseFI GTSAC 3 cut(s) 785, 851, 922
TseI GCWGC 1 cut(s) 845
Tsp45I GTSAC 3 cut(s) 785, 851, 922
TspDTI ATGAA 5 cut(s) 409, 536, 689, 769, 1116
TspGWI ACGGA 1 cut(s) 401
TspRI CASTG 3 cut(s) 663, 808, 931
Tth111I GACNNNGTC 1 cut(s) 824
Van91I CCANNNNNTGG 1 cut(s) 241
VneI GTGCAC 1 cut(s) 1347
VpaK11BI GGWCC 2 cut(s) 754, 1254
VspI ATTAAT 1 cut(s) 642
XapI RAATTY 3 cut(s) 284, 1170, 1190
XceI RCATGY 2 cut(s) 1240, 1266
XhoI CTCGAG 1 cut(s) 297
XmnI GAANNNNTTC 2 cut(s) 527, 1173
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.