FvH4_5g25150

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Reverse (-)
16616008 .. 16619049
3042 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g25150.t2

Sequence Viewer

Length: 1413 bp
ATGGAACTACTCAGCCTCAACTCCATGTTTTGCATGTTTGCTGCTTCTGCTCTCATCTTCTTCTTCTCTCCCATCATCAAGCTCTTCCTCATTTCCGCTCGCCATAAAATCCCACTTCCTCCCGGTTCCCTCGGTTGGCCTTATATCGGCGAGACCTTCCAGCTCTACTCTCAAAACCCAAATGTCTTCTTCGCCTCCAAAATCAAGAGGTTCGGCTCAATCTTCAAGACCCACATCTTGGGATGTCCTTGCGTCATGATCTCAAGTCCGGCAGCTGCCAAATTCGTTCTCTTGACGAAATCCCATCTCTTCAAGCCTACTTTTCCGGCCAGCAAAGAAAGGATGCTGGGAAAGCAAGCTATATTTTTCCACCAAGGAGACTACCACGCAAAGCTGAGGAAGCTTGTTCTCCGAGCCTTCATGCCCACAGCCCTGAAAAACAAAGTCGGAGACATTGAAGCCATCGCCAAGGACTCCCTTCAGTCCTGGGAAGGCCGGTCGTTCAACACCTACCAAGAAATGAAGACGTTCACGTTCAATGTCGCACTGCTTTCCATCTTTGGCAAAGATGAAATCCTATACAGAGAGGATCTCAAGAGATGCTACTACATTCTCGAGAAGGGTTACAATTCAATGTCCATAAACATTCCCGGAACACTCTTCCACAAGTCCATGAAAGCCAGAAAGGAGCTGGCTCAGATCTTGGCCAAAATCATCTCAACCAGGAGAGAAAGCAAGCTCGATGACCACAACGACCTTCTTGGCTCTTTCATGGGCGACAAAGAAGGCCTCACCGACGAGCAAATCGCCGACAACGTCATCGGCGTCATCTTCGCAGCTCGCGACACGACGGCTAGCGTTTTGACTTGGATCATGAAGTATCTCGGCGAAAACCCAAGTGTTCTTGAAGCTGTCACCGAAGAGCAAGAAGCAATCATGAAGCTCAAAGAAGAGAGTGGGGAAGAGAAGGTTCTGAACTGGGAAGACACGAAGAAGATGCCAATTACTTCGAGGGTTCTTCAGGAGACACTTAGAGTTGCTTCCATTTTATCTTTTACATTCCGAGAAGCTGTCGAAGACGTCGAGTACGAAGGTTATCTGATCCCAAAAGGGTGGAAAGTTTTACCACTTTTCAGAAACATTCACCACAGTCCAGAGATCTTTCCTGAGCCTGAGAAGTTTGATCCCACAAGATTTGAGGTAGCTCCAAAACCCAATACATACATGCCATTTGGCAGTGGGAACCACTCATGTCCTGGGAATGAATTGGCCAAGCTGGAGATTTTGGTCATTCTACACCATCTCACAACAAAGTACAGGTGGTCTATTGTTGGCGCAGAAAATGGCATCCAGTATGGCCCTTTTGCTCTTCCCCAAAATGGGCTGCCCATCATATTATCCTCCAAGGAATGA

Protein Analysis

471

Amino Acids

53.34

Weight (kDa)

8.69

Isoelectric Point (pI)

47.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 40 - 368 1.7e-42 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1083
AccB7I CCANNNNNTGG 1 cut(s) 238
AccBSI CCGCTC 1 cut(s) 98
AccII CGCG 1 cut(s) 843
AciI CCGC 1 cut(s) 96
AclWI GGATC 4 cut(s) 597, 878, 1096, 1178
AcoI YGGCCR 3 cut(s) 327, 705, 1269
AcsI RAATTY 1 cut(s) 281
AcuI CTGAAG 2 cut(s) 464, 1004
AcyI GRCGYC 2 cut(s) 825, 1080
AfaI GTAC 2 cut(s) 1088, 1316
AfiI CCNNNNNNNGG 5 cut(s) 135, 146, 238, 1379, 1380
AgsI TTSAA 7 cut(s) 226, 313, 458, 505, 538, 633, 908
AjnI CCWGG 3 cut(s) 485, 722, 1255
Alw26I GTCTC 4 cut(s) 146, 372, 444, 1019
AlwI GGATC 4 cut(s) 597, 878, 1096, 1178
Ama87I CYCGRG 1 cut(s) 614
AoxI GGCC 7 cut(s) 137, 327, 493, 705, 787, 1269, 1357
ApeKI GCWGC 5 cut(s) 41, 272, 275, 836, 1384
ApoI RAATTY 1 cut(s) 281
Asp700I GAANNNNTTC 1 cut(s) 527
AspLEI GCGC 1 cut(s) 1337
AspS9I GGNCC 1 cut(s) 1358
AsuC2I CCSGG 2 cut(s) 123, 651
AsuHPI GGTGA 3 cut(s) 784, 907, 1136
AsuNHI GCTAGC 1 cut(s) 854
AvaI CYCGRG 1 cut(s) 614
BalI TGGCCA 2 cut(s) 707, 1271
BbsI GAAGAC 4 cut(s) 178, 530, 990, 1083
BbvCI CCTCAGC 1 cut(s) 395
BbvI GCAGC 5 cut(s) 28, 262, 284, 848, 1371
BccI CCATC 6 cut(s) 80, 312, 470, 563, 1308, 1397
BceAI ACGGC 1 cut(s) 867
BcgI CGANNNNNNTGC 2 cut(s) 979, 1013
BciT130I CCWGG 3 cut(s) 487, 724, 1257
BcnI CCSGG 2 cut(s) 123, 651
BcoDI GTCTC 4 cut(s) 146, 372, 444, 1019
BfaI CTAG 1 cut(s) 855
BglII AGATCT 2 cut(s) 699, 1158
BisI GCNGC 5 cut(s) 42, 273, 276, 837, 1385
BlsI GCNGC 5 cut(s) 43, 274, 277, 838, 1386
Bme1390I CCNGG 5 cut(s) 123, 487, 651, 724, 1257
BmeT110I CYCGRG 1 cut(s) 614
BmgT120I GGNCC 1 cut(s) 1358
BmiI GGNNCC 2 cut(s) 127, 1244
BmrFI CCNGG 5 cut(s) 123, 487, 651, 724, 1257
BmrI ACTGGG 1 cut(s) 988
BmsI GCATC 4 cut(s) 333, 590, 987, 1356
BmtI GCTAGC 1 cut(s) 858
BmuI ACTGGG 1 cut(s) 988
BpiI GAAGAC 4 cut(s) 178, 530, 990, 1083
BplI GAGNNNNNCTC 2 cut(s) 576, 608
BpmI CTGGAG 1 cut(s) 1298
Bpu10I CCTNAGC 2 cut(s) 395, 1167
BpuEI CTTGAG 2 cut(s) 247, 578
BpuMI CCSGG 2 cut(s) 123, 651
BsaHI GRCGYC 2 cut(s) 825, 1080
BsaI GGTCTC 1 cut(s) 146
BsaJI CCNNGG 6 cut(s) 130, 373, 468, 486, 1256, 1404
Bsc4I CCNNNNNNNGG 5 cut(s) 135, 146, 238, 1379, 1380
Bse118I RCCGGY 1 cut(s) 495
Bse1I ACTGG 2 cut(s) 983, 1351
BseBI CCWGG 3 cut(s) 487, 724, 1257
BseDI CCNNGG 6 cut(s) 130, 373, 468, 486, 1256, 1404
BseGI GGATG 3 cut(s) 248, 348, 1347
BseLI CCNNNNNNNGG 5 cut(s) 135, 146, 238, 1379, 1380
BseMII CTCAG 5 cut(s) 25, 386, 710, 1158, 1164
BseNI ACTGG 2 cut(s) 983, 1351
BseXI GCAGC 5 cut(s) 28, 262, 284, 848, 1371
BseYI CCCAGC 1 cut(s) 346
Bsh1236I CGCG 1 cut(s) 843
Bsh1285I CGRYCG 1 cut(s) 500
BshFI GGCC 7 cut(s) 139, 329, 495, 707, 789, 1271, 1359
BsiEI CGRYCG 1 cut(s) 500
BsiHKCI CYCGRG 1 cut(s) 614
BsiSI CCGG 5 cut(s) 123, 269, 326, 496, 651
BslI CCNNNNNNNGG 5 cut(s) 135, 146, 238, 1379, 1380
BsmAI GTCTC 4 cut(s) 146, 372, 444, 1019
BsnI GGCC 7 cut(s) 139, 329, 495, 707, 789, 1271, 1359
Bso31I GGTCTC 1 cut(s) 146
BsoBI CYCGRG 1 cut(s) 614
Bsp143I GATC 7 cut(s) 258, 589, 699, 870, 1101, 1158, 1183
Bsp68I TCGCGA 1 cut(s) 843
BspACI CCGC 1 cut(s) 96
BspANI GGCC 7 cut(s) 139, 329, 495, 707, 789, 1271, 1359
BspCNI CTCAG 5 cut(s) 24, 387, 709, 1159, 1165
BspFNI CGCG 1 cut(s) 843
BspHI TCATGA 3 cut(s) 255, 873, 936
BspLI GGNNCC 2 cut(s) 127, 1244
BspOI GCTAGC 1 cut(s) 858
BspPI GGATC 4 cut(s) 597, 878, 1096, 1178
BspQI GCTCTTC 3 cut(s) 89, 915, 1374
BspTNI GGTCTC 1 cut(s) 146
BsrBI CCGCTC 1 cut(s) 98
BsrFI RCCGGY 1 cut(s) 495
BsrI ACTGG 2 cut(s) 983, 1351
BssAI RCCGGY 1 cut(s) 495
BssECI CCNNGG 6 cut(s) 130, 373, 468, 486, 1256, 1404
BssMI GATC 7 cut(s) 258, 589, 699, 870, 1101, 1158, 1183
BssNI GRCGYC 2 cut(s) 825, 1080
BssT1I CCWWGG 3 cut(s) 373, 468, 1404
Bst2UI CCWGG 3 cut(s) 487, 724, 1257
Bst4CI ACNGT 1 cut(s) 1151
Bst6I CTCTTC 7 cut(s) 89, 314, 665, 915, 945, 957, 1374
BstACI GRCGYC 2 cut(s) 825, 1080
BstC8I GCNNGC 7 cut(s) 100, 331, 357, 693, 737, 841, 856
BstDEI CTNAG 6 cut(s) 11, 395, 696, 1031, 1167, 1173
BstF5I GGATG 3 cut(s) 248, 348, 1347
BstFNI CGCG 1 cut(s) 843
BstHHI GCGC 1 cut(s) 1337
BstKTI GATC 7 cut(s) 261, 592, 702, 873, 1104, 1161, 1186
BstMAI GTCTC 4 cut(s) 146, 372, 444, 1019
BstMBI GATC 7 cut(s) 258, 589, 699, 870, 1101, 1158, 1183
BstMCI CGRYCG 1 cut(s) 500
BstMWI GCNNNNNNNGC 3 cut(s) 47, 352, 400
BstNI CCWGG 3 cut(s) 487, 724, 1257
BstNSI RCATGY 2 cut(s) 37, 1228
BstSCI CCNGG 5 cut(s) 121, 485, 649, 722, 1255
BstUI CGCG 1 cut(s) 843
BstV1I GCAGC 5 cut(s) 28, 262, 284, 848, 1371
BstV2I GAAGAC 4 cut(s) 178, 530, 990, 1083
BstX2I RGATCY 3 cut(s) 589, 699, 1158
BstXI CCANNNNNNTGG 1 cut(s) 1113
BstYI RGATCY 3 cut(s) 589, 699, 1158
BsuRI GGCC 7 cut(s) 139, 329, 495, 707, 789, 1271, 1359
BtgZI GCGATG 1 cut(s) 448
BtsCI GGATG 3 cut(s) 248, 348, 1347
BtsI GCAGTG 2 cut(s) 545, 1243
BtsIMutI CAGTG 2 cut(s) 545, 1243
BtuMI TCGCGA 1 cut(s) 843
Cac8I GCNNGC 7 cut(s) 100, 331, 357, 693, 737, 841, 856
CciI TCATGA 3 cut(s) 255, 873, 936
CfoI GCGC 1 cut(s) 1337
Cfr10I RCCGGY 1 cut(s) 495
Cfr13I GGNCC 1 cut(s) 1358
CseI GACGC 2 cut(s) 241, 814
Csp6I GTAC 2 cut(s) 1087, 1315
CspCI CAANNNNNGTGG 2 cut(s) 1177, 1212
CviQI GTAC 2 cut(s) 1087, 1315
DdeI CTNAG 6 cut(s) 11, 395, 696, 1031, 1167, 1173
DpnI GATC 7 cut(s) 260, 591, 701, 872, 1103, 1160, 1185
DpnII GATC 7 cut(s) 258, 589, 699, 870, 1101, 1158, 1183
EaeI YGGCCR 3 cut(s) 327, 705, 1269
Eam1104I CTCTTC 7 cut(s) 89, 314, 665, 915, 945, 957, 1374
EarI CTCTTC 7 cut(s) 89, 314, 665, 915, 945, 957, 1374
Eco130I CCWWGG 3 cut(s) 373, 468, 1404
Eco147I AGGCCT 1 cut(s) 789
Eco31I GGTCTC 1 cut(s) 146
Eco57I CTGAAG 2 cut(s) 464, 1004
Eco88I CYCGRG 1 cut(s) 614
EcoRII CCWGG 3 cut(s) 485, 722, 1255
EcoT14I CCWWGG 3 cut(s) 373, 468, 1404
ErhI CCWWGG 3 cut(s) 373, 468, 1404
Fnu4HI GCNGC 5 cut(s) 42, 273, 276, 837, 1385
FokI GGATG 3 cut(s) 255, 355, 1334
Fsp4HI GCNGC 5 cut(s) 42, 273, 276, 837, 1385
FspBI CTAG 1 cut(s) 855
GlaI GCGC 1 cut(s) 1336
GluI GCNGC 5 cut(s) 42, 273, 276, 837, 1385
GsaI CCCAGC 1 cut(s) 350
GsuI CTGGAG 1 cut(s) 1298
HaeIII GGCC 7 cut(s) 139, 329, 495, 707, 789, 1271, 1359
HapII CCGG 5 cut(s) 123, 269, 326, 496, 651
HgaI GACGC 2 cut(s) 241, 814
HhaI GCGC 1 cut(s) 1337
Hin1I GRCGYC 2 cut(s) 825, 1080
Hin6I GCGC 1 cut(s) 1335
HinP1I GCGC 1 cut(s) 1335
HindIII AAGCTT 1 cut(s) 401
HinfI GANTC 1 cut(s) 473
HpaII CCGG 5 cut(s) 123, 269, 326, 496, 651
HphI GGTGA 3 cut(s) 784, 907, 1136
Hpy166II GTNNAC 1 cut(s) 531
Hpy188I TCNGA 7 cut(s) 413, 449, 699, 975, 1064, 1101, 1136
Hpy8I GTNNAC 1 cut(s) 531
Hpy99I CGWCG 3 cut(s) 800, 853, 1085
HpyAV CCTTC 9 cut(s) 166, 427, 485, 488, 613, 767, 779, 961, 1085
HpyCH4III ACNGT 1 cut(s) 1151
HpyCH4IV ACGT 4 cut(s) 527, 533, 816, 1080
HpyCH4V TGCA 1 cut(s) 33
HpyF10VI GCNNNNNNNGC 3 cut(s) 47, 352, 400
HpyF3I CTNAG 6 cut(s) 11, 395, 696, 1031, 1167, 1173
HpySE526I ACGT 4 cut(s) 527, 533, 816, 1080
Hsp92I GRCGYC 2 cut(s) 825, 1080
HspAI GCGC 1 cut(s) 1335
Kzo9I GATC 7 cut(s) 258, 589, 699, 870, 1101, 1158, 1183
LguI GCTCTTC 3 cut(s) 89, 915, 1374
LmnI GCTCC 2 cut(s) 688, 1210
Lsp1109I GCAGC 5 cut(s) 28, 262, 284, 848, 1371
LweI GCATC 4 cut(s) 333, 590, 987, 1356
MaeI CTAG 1 cut(s) 855
MaeII ACGT 4 cut(s) 527, 533, 816, 1080
MaeIII GTNAC 2 cut(s) 623, 913
MalI GATC 7 cut(s) 260, 591, 701, 872, 1103, 1160, 1185
MbiI CCGCTC 1 cut(s) 98
MboI GATC 7 cut(s) 258, 589, 699, 870, 1101, 1158, 1183
MflI RGATCY 3 cut(s) 589, 699, 1158
MlsI TGGCCA 2 cut(s) 707, 1271
MluCI AATT 4 cut(s) 281, 628, 1002, 1265
MluNI TGGCCA 2 cut(s) 707, 1271
MlyI GAGTC 1 cut(s) 467
MmeI TCCRAC 1 cut(s) 427
Mox20I TGGCCA 2 cut(s) 707, 1271
MroXI GAANNNNTTC 1 cut(s) 527
MscI TGGCCA 2 cut(s) 707, 1271
Msp20I TGGCCA 2 cut(s) 707, 1271
MspA1I CMGCKG 1 cut(s) 275
MspI CCGG 5 cut(s) 123, 269, 326, 496, 651
MspR9I CCNGG 5 cut(s) 123, 487, 651, 724, 1257
MvaI CCWGG 3 cut(s) 487, 724, 1257
MvnI CGCG 1 cut(s) 843
MwoI GCNNNNNNNGC 3 cut(s) 47, 352, 400
NciI CCSGG 2 cut(s) 123, 651
NdeII GATC 7 cut(s) 258, 589, 699, 870, 1101, 1158, 1183
NheI GCTAGC 1 cut(s) 854
NlaIV GGNNCC 2 cut(s) 127, 1244
NmeAIII GCCGAG 1 cut(s) 864
NmuCI GTSAC 1 cut(s) 913
NruI TCGCGA 1 cut(s) 843
NspI RCATGY 2 cut(s) 37, 1228
PaeR7I CTCGAG 1 cut(s) 614
PagI TCATGA 3 cut(s) 255, 873, 936
PceI AGGCCT 1 cut(s) 789
PciSI GCTCTTC 3 cut(s) 89, 915, 1374
PcsI WCGNNNNNNNCGW 5 cut(s) 813, 822, 840, 1080, 1086
PdmI GAANNNNTTC 1 cut(s) 527
PflFI GACNNNGTC 1 cut(s) 815
PflMI CCANNNNNTGG 1 cut(s) 238
PfoI TCCNGGA 1 cut(s) 649
PkrI GCNGC 5 cut(s) 43, 274, 277, 838, 1386
PleI GAGTC 1 cut(s) 467
PpsI GAGTC 1 cut(s) 467
Psp6I CCWGG 3 cut(s) 485, 722, 1255
PspFI CCCAGC 1 cut(s) 346
PspGI CCWGG 3 cut(s) 485, 722, 1255
PspN4I GGNNCC 2 cut(s) 127, 1244
PspPI GGNCC 1 cut(s) 1358
PsuI RGATCY 3 cut(s) 589, 699, 1158
PsyI GACNNNGTC 1 cut(s) 815
PvuII CAGCTG 1 cut(s) 275
RruI TCGCGA 1 cut(s) 843
RsaI GTAC 2 cut(s) 1088, 1316
RsaNI GTAC 2 cut(s) 1087, 1315
SapI GCTCTTC 3 cut(s) 89, 915, 1374
SatI GCNGC 5 cut(s) 42, 273, 276, 837, 1385
Sau3AI GATC 7 cut(s) 258, 589, 699, 870, 1101, 1158, 1183
Sau96I GGNCC 1 cut(s) 1358
SchI GAGTC 1 cut(s) 467
ScrFI CCNGG 5 cut(s) 123, 487, 651, 724, 1257
SfaNI GCATC 4 cut(s) 333, 590, 987, 1356
Sfr274I CTCGAG 1 cut(s) 614
SlaI CTCGAG 1 cut(s) 614
SmlI CTYRAG 3 cut(s) 262, 593, 614
SmoI CTYRAG 3 cut(s) 262, 593, 614
Sse9I AATT 4 cut(s) 281, 628, 1002, 1265
SseBI AGGCCT 1 cut(s) 789
SsiI CCGC 1 cut(s) 96
SspMI CTAG 1 cut(s) 855
StuI AGGCCT 1 cut(s) 789
StyD4I CCNGG 5 cut(s) 121, 485, 649, 722, 1255
StyI CCWWGG 3 cut(s) 373, 468, 1404
TaaI ACNGT 1 cut(s) 1151
TaiI ACGT 4 cut(s) 530, 536, 819, 1083
TaqI TCGA 5 cut(s) 615, 741, 1010, 1074, 1083
TasI AATT 4 cut(s) 281, 628, 1002, 1265
TatI WGTACW 1 cut(s) 1314
TscAI CASTG 2 cut(s) 552, 1243
TseFI GTSAC 1 cut(s) 913
TseI GCWGC 5 cut(s) 41, 272, 275, 836, 1384
Tsp45I GTSAC 1 cut(s) 913
TspDTI ATGAA 8 cut(s) 409, 536, 585, 689, 760, 890, 953, 1278
TspRI CASTG 2 cut(s) 552, 1243
Tth111I GACNNNGTC 1 cut(s) 815
Van91I CCANNNNNTGG 1 cut(s) 238
XapI RAATTY 1 cut(s) 281
XceI RCATGY 2 cut(s) 37, 1228
XcmI CCANNNNNNNNNTGG 2 cut(s) 688, 1253
XhoI CTCGAG 1 cut(s) 614
XmnI GAANNNNTTC 1 cut(s) 527
XspI CTAG 1 cut(s) 855
ZraI GACGTC 1 cut(s) 1081
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.