Rmu_co8050526.1_g000001

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8050526.1
Physical Location & Seq
Reverse (-)
2 .. 560
559 bp
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UTR
Exon/CDS
Intron
Rmu_co8050526.1_g000001.1.cds

Sequence Viewer

Length: 293 bp
gagtgttcttgaagctgtcacggaagagcaagaagcaattatgaggcttaaagaagagagtggcgaagacaaggctctgaattgggaagataccaagaagatgcccattacttcgagggttcttcaggagacactgcgagttgcttccatcttatcttttacatttagggaagctgtcgaagatgttgagtacgaaggttatctgataccaaaagggtggaaaattttaccacttttcagaaacattcaccacagcccggagatctttccggagcctgagaagtttgatccca

Protein Analysis

97

Amino Acids

11.32

Weight (kDa)

4.74

Isoelectric Point (pI)

69.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 269
AclWI GGATC 1 cut(s) 282
AcsI RAATTY 1 cut(s) 223
AcuI CTGAAG 1 cut(s) 108
AfaI GTAC 1 cut(s) 192
AfiI CCNNNNNNNGG 1 cut(s) 257
AgsI TTSAA 1 cut(s) 12
AluBI AGCT 2 cut(s) 15, 174
AluI AGCT 2 cut(s) 15, 174
Alw26I GTCTC 1 cut(s) 123
AlwI GGATC 1 cut(s) 282
Aor13HI TCCGGA 1 cut(s) 269
ApoI RAATTY 1 cut(s) 223
AsuC2I CCSGG 1 cut(s) 258
AsuHPI GGTGA 1 cut(s) 240
BbsI GAAGAC 1 cut(s) 73
BccI CCATC 1 cut(s) 156
BcnI CCSGG 1 cut(s) 258
BcoDI GTCTC 1 cut(s) 123
BglII AGATCT 1 cut(s) 262
Bme1390I CCNGG 1 cut(s) 258
BmiI GGNNCC 1 cut(s) 274
BmrFI CCNGG 1 cut(s) 258
BmsI GCATC 1 cut(s) 91
BpiI GAAGAC 1 cut(s) 73
BpuMI CCSGG 1 cut(s) 258
BsaWI WCCGGW 1 cut(s) 269
Bsc4I CCNNNNNNNGG 1 cut(s) 257
BseAI TCCGGA 1 cut(s) 269
BseLI CCNNNNNNNGG 1 cut(s) 257
BseMII CTCAG 1 cut(s) 268
BsiSI CCGG 2 cut(s) 258, 270
BslI CCNNNNNNNGG 1 cut(s) 257
BsmAI GTCTC 1 cut(s) 123
Bsp13I TCCGGA 1 cut(s) 269
Bsp143I GATC 2 cut(s) 262, 287
BspCNI CTCAG 1 cut(s) 269
BspEI TCCGGA 1 cut(s) 269
BspLI GGNNCC 1 cut(s) 274
BspPI GGATC 1 cut(s) 282
BspQI GCTCTTC 1 cut(s) 19
BssMI GATC 2 cut(s) 262, 287
Bst6I CTCTTC 2 cut(s) 19, 49
BstDEI CTNAG 1 cut(s) 277
BstKTI GATC 2 cut(s) 265, 290
BstMAI GTCTC 1 cut(s) 123
BstMBI GATC 2 cut(s) 262, 287
BstSCI CCNGG 1 cut(s) 256
BstV2I GAAGAC 1 cut(s) 73
BstX2I RGATCY 1 cut(s) 262
BstXI CCANNNNNNTGG 1 cut(s) 217
BstYI RGATCY 1 cut(s) 262
BtsI GCAGTG 1 cut(s) 132
BtsIMutI CAGTG 1 cut(s) 132
Csp6I GTAC 1 cut(s) 191
CviJI RGCY 6 cut(s) 15, 47, 75, 174, 256, 275
CviKI_1 RGCY 6 cut(s) 15, 47, 75, 174, 256, 275
CviQI GTAC 1 cut(s) 191
DdeI CTNAG 1 cut(s) 277
DpnI GATC 2 cut(s) 264, 289
DpnII GATC 2 cut(s) 262, 287
Eam1104I CTCTTC 2 cut(s) 19, 49
EarI CTCTTC 2 cut(s) 19, 49
Eco57I CTGAAG 1 cut(s) 108
FaiI YATR 1 cut(s) 42
HapII CCGG 2 cut(s) 258, 270
HpaII CCGG 2 cut(s) 258, 270
HphI GGTGA 1 cut(s) 240
Hpy188I TCNGA 3 cut(s) 79, 205, 240
Hpy188III TCNNGA 3 cut(s) 9, 126, 270
HpyAV CCTTC 1 cut(s) 189
HpyF3I CTNAG 1 cut(s) 277
Kpn2I TCCGGA 1 cut(s) 269
Kzo9I GATC 2 cut(s) 262, 287
LguI GCTCTTC 1 cut(s) 19
LmnI GCTCC 1 cut(s) 272
LpnPI CCDG 4 cut(s) 111, 271, 283, 289
LweI GCATC 1 cut(s) 91
MaeIII GTNAC 1 cut(s) 17
MalI GATC 2 cut(s) 264, 289
MboI GATC 2 cut(s) 262, 287
MboII GAAGA 7 cut(s) 36, 66, 78, 99, 110, 114, 192
MflI RGATCY 1 cut(s) 262
MluCI AATT 3 cut(s) 37, 80, 223
MnlI CCTC 2 cut(s) 37, 109
MroI TCCGGA 1 cut(s) 269
MseI TTAA 1 cut(s) 49
MspI CCGG 2 cut(s) 258, 270
MspR9I CCNGG 1 cut(s) 258
NciI CCSGG 1 cut(s) 258
NdeII GATC 2 cut(s) 262, 287
NlaIV GGNNCC 1 cut(s) 274
NmuCI GTSAC 1 cut(s) 17
PciSI GCTCTTC 1 cut(s) 19
PspN4I GGNNCC 1 cut(s) 274
PsuI RGATCY 1 cut(s) 262
RsaI GTAC 1 cut(s) 192
RsaNI GTAC 1 cut(s) 191
SapI GCTCTTC 1 cut(s) 19
SaqAI TTAA 1 cut(s) 49
Sau3AI GATC 2 cut(s) 262, 287
ScrFI CCNGG 1 cut(s) 258
SetI ASST 3 cut(s) 17, 176, 200
SfaNI GCATC 1 cut(s) 91
Sse9I AATT 3 cut(s) 37, 80, 223
StyD4I CCNGG 1 cut(s) 256
TaqI TCGA 2 cut(s) 114, 178
TasI AATT 3 cut(s) 37, 80, 223
Tru1I TTAA 1 cut(s) 49
Tru9I TTAA 1 cut(s) 49
TscAI CASTG 1 cut(s) 139
TseFI GTSAC 1 cut(s) 17
Tsp45I GTSAC 1 cut(s) 17
TspGWI ACGGA 1 cut(s) 36
TspRI CASTG 1 cut(s) 139
XapI RAATTY 1 cut(s) 223
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.