Belongs to the GRAS family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| GRAS | PF03514 | 120 - 490 | 8.7e-146 | GRAS domain family |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 138 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 266 |
| AccII | CGCG | 3 cut(s) | 769, 1023, 1148 |
| AciI | CCGC | 8 cut(s) | 349, 436, 767, 769, 1021, 1104, 1146, 1316 |
| AclI | AACGTT | 1 cut(s) | 873 |
| AcsI | RAATTY | 1 cut(s) | 1351 |
| AcuI | CTGAAG | 1 cut(s) | 786 |
| AfaI | GTAC | 4 cut(s) | 5, 71, 106, 1394 |
| AflIII | ACRYGT | 2 cut(s) | 170, 633 |
| AgeI | ACCGGT | 2 cut(s) | 76, 1026 |
| AgsI | TTSAA | 7 cut(s) | 199, 208, 420, 470, 622, 871, 1356 |
| AjnI | CCWGG | 3 cut(s) | 735, 754, 943 |
| Alw21I | GWGCWC | 2 cut(s) | 1010, 1284 |
| Alw26I | GTCTC | 1 cut(s) | 1121 |
| Ama87I | CYCGRG | 4 cut(s) | 110, 343, 932, 1114 |
| AoxI | GGCC | 4 cut(s) | 245, 752, 761, 823 |
| ApeKI | GCWGC | 3 cut(s) | 10, 508, 746 |
| ApoI | RAATTY | 1 cut(s) | 1351 |
| AseI | ATTAAT | 2 cut(s) | 312, 1200 |
| AsiGI | ACCGGT | 2 cut(s) | 76, 1026 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 203 |
| AspA2I | CCTAGG | 1 cut(s) | 1285 |
| AspLEI | GCGC | 1 cut(s) | 508 |
| AspS9I | GGNCC | 2 cut(s) | 245, 761 |
| AsuHPI | GGTGA | 6 cut(s) | 247, 470, 1010, 1054, 1078, 1360 |
| AsuNHI | GCTAGC | 2 cut(s) | 511, 566 |
| AvaI | CYCGRG | 4 cut(s) | 110, 343, 932, 1114 |
| AvrII | CCTAGG | 1 cut(s) | 1285 |
| BanII | GRGCYC | 1 cut(s) | 1284 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 53, 85 |
| BauI | CACGAG | 3 cut(s) | 813, 1277, 1456 |
| Bbv12I | GWGCWC | 2 cut(s) | 1010, 1284 |
| BbvCI | CCTCAGC | 1 cut(s) | 657 |
| BbvI | GCAGC | 3 cut(s) | 22, 520, 758 |
| BccI | CCATC | 6 cut(s) | 235, 403, 418, 436, 1306, 1406 |
| BceAI | ACGGC | 2 cut(s) | 312, 944 |
| BciT130I | CCWGG | 3 cut(s) | 737, 756, 945 |
| BciVI | GTATCC | 1 cut(s) | 623 |
| BcoDI | GTCTC | 1 cut(s) | 1121 |
| BfuI | GTATCC | 1 cut(s) | 623 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 760 |
| BisI | GCNGC | 6 cut(s) | 11, 437, 509, 747, 1104, 1146 |
| BlnI | CCTAGG | 1 cut(s) | 1285 |
| BlpI | GCTNAGC | 2 cut(s) | 852, 861 |
| BlsI | GCNGC | 6 cut(s) | 12, 438, 510, 748, 1105, 1147 |
| Bme1390I | CCNGG | 3 cut(s) | 737, 756, 945 |
| BmeT110I | CYCGRG | 4 cut(s) | 110, 343, 932, 1114 |
| BmgT120I | GGNCC | 2 cut(s) | 245, 761 |
| BmiI | GGNNCC | 1 cut(s) | 246 |
| BmrFI | CCNGG | 3 cut(s) | 737, 756, 945 |
| BmsI | GCATC | 2 cut(s) | 1425, 1447 |
| BmtI | GCTAGC | 2 cut(s) | 515, 570 |
| Bpu10I | CCTNAGC | 4 cut(s) | 65, 657, 827, 1373 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 852, 861 |
| BpuEI | CTTGAG | 1 cut(s) | 47 |
| Bsa29I | ATCGAT | 1 cut(s) | 789 |
| BsaJI | CCNNGG | 9 cut(s) | 294, 767, 912, 931, 944, 1059, 1115, 1285, 1344 |
| BsaWI | WCCGGW | 2 cut(s) | 76, 1026 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1266, 1296 |
| Bse118I | RCCGGY | 3 cut(s) | 76, 562, 1026 |
| Bse3DI | GCAATG | 1 cut(s) | 669 |
| BseBI | CCWGG | 3 cut(s) | 737, 756, 945 |
| BseCI | ATCGAT | 1 cut(s) | 789 |
| BseDI | CCNNGG | 9 cut(s) | 294, 767, 912, 931, 944, 1059, 1115, 1285, 1344 |
| BseGI | GGATG | 3 cut(s) | 196, 1317, 1440 |
| BseMI | GCAATG | 1 cut(s) | 669 |
| BseMII | CTCAG | 2 cut(s) | 648, 1398 |
| BseRI | GAGGAG | 1 cut(s) | 120 |
| BseXI | GCAGC | 3 cut(s) | 22, 520, 758 |
| Bsh1236I | CGCG | 3 cut(s) | 769, 1023, 1148 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1027 |
| BshFI | GGCC | 4 cut(s) | 247, 754, 763, 825 |
| BshTI | ACCGGT | 2 cut(s) | 76, 1026 |
| BshVI | ATCGAT | 1 cut(s) | 789 |
| BsiEI | CGRYCG | 1 cut(s) | 1027 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1010, 1284 |
| BsiHKCI | CYCGRG | 4 cut(s) | 110, 343, 932, 1114 |
| BsiSI | CCGG | 4 cut(s) | 77, 248, 563, 1027 |
| BslFI | GGGAC | 1 cut(s) | 1326 |
| BsmAI | GTCTC | 1 cut(s) | 1121 |
| BsmFI | GGGAC | 1 cut(s) | 1326 |
| BsnI | GGCC | 4 cut(s) | 247, 754, 763, 825 |
| BsoBI | CYCGRG | 4 cut(s) | 110, 343, 932, 1114 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1010, 1284 |
| Bsp1407I | TGTACA | 1 cut(s) | 3 |
| Bsp143I | GATC | 5 cut(s) | 323, 364, 400, 1183, 1261 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 852, 861 |
| BspACI | CCGC | 8 cut(s) | 349, 436, 767, 769, 1021, 1104, 1146, 1316 |
| BspANI | GGCC | 4 cut(s) | 247, 754, 763, 825 |
| BspCNI | CTCAG | 2 cut(s) | 649, 1397 |
| BspDI | ATCGAT | 1 cut(s) | 789 |
| BspFNI | CGCG | 3 cut(s) | 769, 1023, 1148 |
| BspLI | GGNNCC | 1 cut(s) | 246 |
| BspOI | GCTAGC | 2 cut(s) | 515, 570 |
| BspQI | GCTCTTC | 1 cut(s) | 1040 |
| BsrDI | GCAATG | 1 cut(s) | 669 |
| BsrFI | RCCGGY | 3 cut(s) | 76, 562, 1026 |
| BsrGI | TGTACA | 1 cut(s) | 3 |
| BssAI | RCCGGY | 3 cut(s) | 76, 562, 1026 |
| BssECI | CCNNGG | 9 cut(s) | 294, 767, 912, 931, 944, 1059, 1115, 1285, 1344 |
| BssMI | GATC | 5 cut(s) | 323, 364, 400, 1183, 1261 |
| BssSI | CACGAG | 3 cut(s) | 813, 1277, 1456 |
| BssT1I | CCWWGG | 3 cut(s) | 1059, 1285, 1344 |
| Bst2BI | CACGAG | 3 cut(s) | 813, 1277, 1456 |
| Bst2UI | CCWGG | 3 cut(s) | 737, 756, 945 |
| Bst4CI | ACNGT | 4 cut(s) | 99, 235, 474, 1305 |
| Bst6I | CTCTTC | 1 cut(s) | 1040 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 647 |
| BstAUI | TGTACA | 1 cut(s) | 3 |
| BstC8I | GCNNGC | 3 cut(s) | 513, 568, 858 |
| BstDEI | CTNAG | 7 cut(s) | 65, 657, 827, 852, 861, 1373, 1384 |
| BstDSI | CCRYGG | 2 cut(s) | 294, 767 |
| BstF5I | GGATG | 3 cut(s) | 196, 1317, 1440 |
| BstFNI | CGCG | 3 cut(s) | 769, 1023, 1148 |
| BstHHI | GCGC | 1 cut(s) | 508 |
| BstKTI | GATC | 5 cut(s) | 326, 367, 403, 1186, 1264 |
| BstMAI | GTCTC | 1 cut(s) | 1121 |
| BstMBI | GATC | 5 cut(s) | 323, 364, 400, 1183, 1261 |
| BstMCI | CGRYCG | 1 cut(s) | 1027 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 512, 647, 746, 760, 857, 862, 1279, 1460 |
| BstNI | CCWGG | 3 cut(s) | 737, 756, 945 |
| BstNSI | RCATGY | 4 cut(s) | 174, 592, 637, 1251 |
| BstSCI | CCNGG | 3 cut(s) | 735, 754, 943 |
| BstUI | CGCG | 3 cut(s) | 769, 1023, 1148 |
| BstV1I | GCAGC | 3 cut(s) | 22, 520, 758 |
| Bsu15I | ATCGAT | 1 cut(s) | 789 |
| BsuI | GTATCC | 1 cut(s) | 623 |
| BsuRI | GGCC | 4 cut(s) | 247, 754, 763, 825 |
| BsuTUI | ATCGAT | 1 cut(s) | 789 |
| BtgI | CCRYGG | 2 cut(s) | 294, 767 |
| BtgZI | GCGATG | 2 cut(s) | 1163, 1228 |
| BtsCI | GGATG | 3 cut(s) | 196, 1317, 1440 |
| Cac8I | GCNNGC | 3 cut(s) | 513, 568, 858 |
| CfoI | GCGC | 1 cut(s) | 508 |
| Cfr10I | RCCGGY | 3 cut(s) | 76, 562, 1026 |
| Cfr13I | GGNCC | 2 cut(s) | 245, 761 |
| Cfr42I | CCGCGG | 1 cut(s) | 770 |
| ClaI | ATCGAT | 1 cut(s) | 789 |
| Csp6I | GTAC | 4 cut(s) | 4, 70, 105, 1393 |
| CspAI | ACCGGT | 2 cut(s) | 76, 1026 |
| CviAII | CATG | 6 cut(s) | 171, 375, 589, 634, 1123, 1248 |
| CviQI | GTAC | 4 cut(s) | 4, 70, 105, 1393 |
| DdeI | CTNAG | 7 cut(s) | 65, 657, 827, 852, 861, 1373, 1384 |
| DpnI | GATC | 5 cut(s) | 325, 366, 402, 1185, 1263 |
| DpnII | GATC | 5 cut(s) | 323, 364, 400, 1183, 1261 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 266 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 266 |
| Eam1104I | CTCTTC | 1 cut(s) | 1040 |
| EarI | CTCTTC | 1 cut(s) | 1040 |
| Ecl136II | GAGCTC | 1 cut(s) | 1282 |
| Eco130I | CCWWGG | 3 cut(s) | 1059, 1285, 1344 |
| Eco147I | AGGCCT | 1 cut(s) | 754 |
| Eco24I | GRGCYC | 1 cut(s) | 1284 |
| Eco53kI | GAGCTC | 1 cut(s) | 1282 |
| Eco57I | CTGAAG | 1 cut(s) | 786 |
| Eco88I | CYCGRG | 4 cut(s) | 110, 343, 932, 1114 |
| EcoICRI | GAGCTC | 1 cut(s) | 1282 |
| EcoRI | GAATTC | 1 cut(s) | 1351 |
| EcoRII | CCWGG | 3 cut(s) | 735, 754, 943 |
| EcoT14I | CCWWGG | 3 cut(s) | 1059, 1285, 1344 |
| EcoT22I | ATGCAT | 1 cut(s) | 1440 |
| EcoT38I | GRGCYC | 1 cut(s) | 1284 |
| ErhI | CCWWGG | 3 cut(s) | 1059, 1285, 1344 |
| FaeI | CATG | 6 cut(s) | 174, 378, 592, 637, 1126, 1251 |
| FaqI | GGGAC | 1 cut(s) | 1326 |
| FatI | CATG | 6 cut(s) | 170, 374, 588, 633, 1122, 1247 |
| FauI | CCCGC | 2 cut(s) | 342, 1309 |
| FauNDI | CATATG | 2 cut(s) | 160, 987 |
| Fnu4HI | GCNGC | 6 cut(s) | 11, 437, 509, 747, 1104, 1146 |
| FokI | GGATG | 3 cut(s) | 203, 1324, 1447 |
| FriOI | GRGCYC | 1 cut(s) | 1284 |
| Fsp4HI | GCNGC | 6 cut(s) | 11, 437, 509, 747, 1104, 1146 |
| GlaI | GCGC | 1 cut(s) | 507 |
| GluI | GCNGC | 6 cut(s) | 11, 437, 509, 747, 1104, 1146 |
| HaeIII | GGCC | 4 cut(s) | 247, 754, 763, 825 |
| HapII | CCGG | 4 cut(s) | 77, 248, 563, 1027 |
| HhaI | GCGC | 1 cut(s) | 508 |
| Hin1II | CATG | 6 cut(s) | 174, 378, 592, 637, 1126, 1251 |
| Hin6I | GCGC | 1 cut(s) | 506 |
| HinP1I | GCGC | 1 cut(s) | 506 |
| HincII | GTYRAC | 1 cut(s) | 82 |
| HindII | GTYRAC | 1 cut(s) | 82 |
| HindIII | AAGCTT | 2 cut(s) | 62, 854 |
| HpaI | GTTAAC | 1 cut(s) | 82 |
| HpaII | CCGG | 4 cut(s) | 77, 248, 563, 1027 |
| HphI | GGTGA | 6 cut(s) | 247, 470, 1010, 1054, 1078, 1360 |
| Hpy166II | GTNNAC | 5 cut(s) | 82, 95, 685, 964, 1237 |
| Hpy188I | TCNGA | 4 cut(s) | 394, 777, 913, 1387 |
| Hpy188III | TCNNGA | 8 cut(s) | 122, 305, 332, 343, 557, 1114, 1234, 1442 |
| Hpy8I | GTNNAC | 5 cut(s) | 82, 95, 685, 964, 1237 |
| Hpy99I | CGWCG | 1 cut(s) | 523 |
| HpyAV | CCTTC | 3 cut(s) | 488, 661, 1247 |
| HpyCH4III | ACNGT | 4 cut(s) | 99, 235, 474, 1305 |
| HpyCH4IV | ACGT | 1 cut(s) | 873 |
| HpyCH4V | TGCA | 4 cut(s) | 276, 592, 746, 1438 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 512, 647, 746, 760, 857, 862, 1279, 1460 |
| HpyF3I | CTNAG | 7 cut(s) | 65, 657, 827, 852, 861, 1373, 1384 |
| HpySE526I | ACGT | 1 cut(s) | 873 |
| Hsp92II | CATG | 6 cut(s) | 174, 378, 592, 637, 1126, 1251 |
| HspAI | GCGC | 1 cut(s) | 506 |
| KspAI | GTTAAC | 1 cut(s) | 82 |
| KspI | CCGCGG | 1 cut(s) | 770 |
| Kzo9I | GATC | 5 cut(s) | 323, 364, 400, 1183, 1261 |
| LguI | GCTCTTC | 1 cut(s) | 1040 |
| LmnI | GCTCC | 6 cut(s) | 479, 1207, 1256, 1270, 1287, 1415 |
| Lsp1109I | GCAGC | 3 cut(s) | 22, 520, 758 |
| LweI | GCATC | 2 cut(s) | 1425, 1447 |
| MaeII | ACGT | 1 cut(s) | 873 |
| MaeIII | GTNAC | 5 cut(s) | 184, 724, 1066, 1168, 1299 |
| MalI | GATC | 5 cut(s) | 325, 366, 402, 1185, 1263 |
| MboI | GATC | 5 cut(s) | 323, 364, 400, 1183, 1261 |
| MboII | GAAGA | 4 cut(s) | 683, 1057, 1102, 1415 |
| MfeI | CAATTG | 1 cut(s) | 1161 |
| MhlI | GDGCHC | 2 cut(s) | 1010, 1284 |
| MluCI | AATT | 2 cut(s) | 1161, 1351 |
| MmeI | TCCRAC | 5 cut(s) | 237, 299, 372, 817, 1412 |
| Mph1103I | ATGCAT | 1 cut(s) | 1440 |
| MroXI | GAANNNNTTC | 1 cut(s) | 203 |
| MseI | TTAA | 8 cut(s) | 81, 312, 356, 546, 888, 918, 1200, 1362 |
| MspA1I | CMGCKG | 1 cut(s) | 769 |
| MspI | CCGG | 4 cut(s) | 77, 248, 563, 1027 |
| MspR9I | CCNGG | 3 cut(s) | 737, 756, 945 |
| MunI | CAATTG | 1 cut(s) | 1161 |
| MvaI | CCWGG | 3 cut(s) | 737, 756, 945 |
| MvnI | CGCG | 3 cut(s) | 769, 1023, 1148 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 512, 647, 746, 760, 857, 862, 1279, 1460 |
| NdeI | CATATG | 2 cut(s) | 160, 987 |
| NdeII | GATC | 5 cut(s) | 323, 364, 400, 1183, 1261 |
| NheI | GCTAGC | 2 cut(s) | 511, 566 |
| NlaIII | CATG | 6 cut(s) | 174, 378, 592, 637, 1126, 1251 |
| NlaIV | GGNNCC | 1 cut(s) | 246 |
| NmuCI | GTSAC | 4 cut(s) | 724, 1066, 1168, 1299 |
| NsiI | ATGCAT | 1 cut(s) | 1440 |
| NspI | RCATGY | 4 cut(s) | 174, 592, 637, 1251 |
| PaeR7I | CTCGAG | 2 cut(s) | 110, 343 |
| PceI | AGGCCT | 1 cut(s) | 754 |
| PciI | ACATGT | 2 cut(s) | 170, 633 |
| PciSI | GCTCTTC | 1 cut(s) | 1040 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 879, 1270 |
| PdmI | GAANNNNTTC | 1 cut(s) | 203 |
| PfeI | GAWTC | 3 cut(s) | 290, 772, 1015 |
| PinAI | ACCGGT | 2 cut(s) | 76, 1026 |
| PkrI | GCNGC | 6 cut(s) | 12, 438, 510, 748, 1105, 1147 |
| PscI | ACATGT | 2 cut(s) | 170, 633 |
| PshBI | ATTAAT | 2 cut(s) | 312, 1200 |
| PsiI | TTATAA | 1 cut(s) | 138 |
| Psp124BI | GAGCTC | 1 cut(s) | 1284 |
| Psp1406I | AACGTT | 1 cut(s) | 873 |
| Psp6I | CCWGG | 3 cut(s) | 735, 754, 943 |
| PspGI | CCWGG | 3 cut(s) | 735, 754, 943 |
| PspN4I | GGNNCC | 1 cut(s) | 246 |
| PspPI | GGNCC | 2 cut(s) | 245, 761 |
| PspXI | VCTCGAGB | 1 cut(s) | 110 |
| RsaI | GTAC | 4 cut(s) | 5, 71, 106, 1394 |
| RsaNI | GTAC | 4 cut(s) | 4, 70, 105, 1393 |
| SacI | GAGCTC | 1 cut(s) | 1284 |
| SacII | CCGCGG | 1 cut(s) | 770 |
| SapI | GCTCTTC | 1 cut(s) | 1040 |
| SaqAI | TTAA | 8 cut(s) | 81, 312, 356, 546, 888, 918, 1200, 1362 |
| SatI | GCNGC | 6 cut(s) | 11, 437, 509, 747, 1104, 1146 |
| Sau3AI | GATC | 5 cut(s) | 323, 364, 400, 1183, 1261 |
| Sau96I | GGNCC | 2 cut(s) | 245, 761 |
| ScrFI | CCNGG | 3 cut(s) | 737, 756, 945 |
| SduI | GDGCHC | 2 cut(s) | 1010, 1284 |
| SfaNI | GCATC | 2 cut(s) | 1425, 1447 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 760 |
| Sfr274I | CTCGAG | 2 cut(s) | 110, 343 |
| Sfr303I | CCGCGG | 1 cut(s) | 770 |
| SgrBI | CCGCGG | 1 cut(s) | 770 |
| SlaI | CTCGAG | 2 cut(s) | 110, 343 |
| SmlI | CTYRAG | 3 cut(s) | 26, 110, 343 |
| SmoI | CTYRAG | 3 cut(s) | 26, 110, 343 |
| Sse9I | AATT | 2 cut(s) | 1161, 1351 |
| SseBI | AGGCCT | 1 cut(s) | 754 |
| SsiI | CCGC | 8 cut(s) | 349, 436, 767, 769, 1021, 1104, 1146, 1316 |
| SstI | GAGCTC | 1 cut(s) | 1284 |
| StuI | AGGCCT | 1 cut(s) | 754 |
| StyD4I | CCNGG | 3 cut(s) | 735, 754, 943 |
| StyI | CCWWGG | 3 cut(s) | 1059, 1285, 1344 |
| TaaI | ACNGT | 4 cut(s) | 99, 235, 474, 1305 |
| TaiI | ACGT | 1 cut(s) | 876 |
| TaqI | TCGA | 8 cut(s) | 111, 228, 270, 344, 789, 882, 940, 1441 |
| TaqII | GACCGA | 1 cut(s) | 695 |
| TasI | AATT | 2 cut(s) | 1161, 1351 |
| TatI | WGTACW | 2 cut(s) | 3, 1392 |
| TauI | GCSGC | 3 cut(s) | 439, 1106, 1148 |
| TfiI | GAWTC | 3 cut(s) | 290, 772, 1015 |
| Tru1I | TTAA | 8 cut(s) | 81, 312, 356, 546, 888, 918, 1200, 1362 |
| Tru9I | TTAA | 8 cut(s) | 81, 312, 356, 546, 888, 918, 1200, 1362 |
| TseFI | GTSAC | 4 cut(s) | 724, 1066, 1168, 1299 |
| TseI | GCWGC | 3 cut(s) | 10, 508, 746 |
| Tsp45I | GTSAC | 4 cut(s) | 724, 1066, 1168, 1299 |
| TspDTI | ATGAA | 5 cut(s) | 363, 680, 971, 1111, 1148 |
| TspGWI | ACGGA | 2 cut(s) | 203, 293 |
| VspI | ATTAAT | 2 cut(s) | 312, 1200 |
| XapI | RAATTY | 1 cut(s) | 1351 |
| XbaI | TCTAGA | 1 cut(s) | 331 |
| XceI | RCATGY | 4 cut(s) | 174, 592, 637, 1251 |
| XhoI | CTCGAG | 2 cut(s) | 110, 343 |
| XmaJI | CCTAGG | 1 cut(s) | 1285 |
| XmnI | GAANNNNTTC | 1 cut(s) | 203 |
| Zsp2I | ATGCAT | 1 cut(s) | 1440 |