Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr9

Orthogroup ID

OG0001368

Physical Location & Seq

Genomic Coordinates Reverse (-)

3399765 .. 3401426

Gene Structure 1662 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom09g04610.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1662 bp

ATGCAAGCATCAAAGGAGCAGAGAATTTCAGGGATGTCAAACCGGTTATATTATCAGCCAGTCCAAGAAGTAGAAGCCTACTGCTTGCCTCGTTTCCAAACTTTGGACCCCCGGCTACATTACAATGAGAGCAGCCAAAGTACCCACCTCCCATTGCAGAGTTTCCATGAACACTACTGCACTTTGGAGTCTTCCTGGTCTAATGGTAGCTATAACGTTTATAACACCCCATCAAATGTCAGTTTCTCACCTAGTGGAAGCCCGATGTCGCAGCAAGACTCTCATTCATATCCGTCTGATCAGTACCATTCCCCTGACCAGACCTACAGCTCTTCGATAAGTGGATCCTGCATAACCGATGATGCAACTGACTTCAAGTACAAACTGAAACAATTAGAAACTGTAATGCTGGGTCCTGATTCTAATATTCTTGATAACTATTGCATTACTTTCCCGAACGGGACGAGCAATTCCCTGCCAGACGAGGACAGCTGGGGACAGATTCTGGAATCAATCTCTAAAAAGGATTTGAAGCAAGTCCTCATCTTCTGCGCAAAAGCAGTAGCAGATAATGATCTGTTAATGGCACAGTGGATGATGGATGAGTTACGCCAGATGGTTTCAGTTTCGGGTGAACCAATTCAGAGGTTGGGTGCATACTTGCTGGAAGGACTAGTTGCACGGAAGGCGTCTTCGGGGAGTAACATCTACAAAGCACTGAGATGCAAAGAACCAGCAAGTTGCGAACTCCTCTCTTACATGCATATTCTCTATGAGGTTTGCCCTTACTTCAAATTCGGGTACATGTCTGCAAATGGAGCCATTGCAGAAGCCATGAAGGATGAGGACAGTGTTCACATCATTGATTTCCAAATCGGTCAGGGGAGTCAGTGGGTCACTCTAATCCAAGCTTTTGCATCCAGGCCTGGTGGACCACCCCACATCCGTATAACAGGTATTGATGATTCCATGTCAGCTTATGCCCGTGGAGGAGGACCAAACATTGTGGGAAAGAGGTTGTCTAAGCTTGCAGAGTTGTTCAAGGTTCCATTCGAGTTCCACACCGCTTCCATGTCTGGTTGTGACGTACAGCTGGAGCATCTTTGTGTTCGACCTGGGGAGGCTTTGGCTATCAACTTTGCGTTCATGCTGCACCACATGCCCGATGAGAGCGTCTGCACTCAGAATCACCGGGATAGGCTGTTGAGGTTGGTTAAGAGCTTGTCTCCGAAAGTGGTGACCCTCGTTGAGCAAGAATCTAACACAAACACCGCTGCATTCTATCCACGCTTTGTAGAAACACTAAATTACTACACAGCTATGTTTGAGTCAATTGATGTGACTCTTCCGAGAGATCACAAGGAGCGGATCAATGTGGAGCAACACTGCTTGGCTAGGGAGGTTGTTAACATAATAGCATGCGAGGGCGTTGAGAGGGTGGAAAGACACGAGCTTCTTGGGAAGTGGAGGTTGCGGTTTGCAATGGCTGGATTTACACCGTACCCTTTAAGCTCCTTGGTAAATGCCACCATCAAGACGCTGCTGGATAACTACTCTGACAAATATCGGCTTGAAGAGCGAGACGGGGCACTCTATCTTGGCTGGAAGAACAGAGACTTGGTTGCTTCTTGTGCATGGAGGTGCAAACACAGCACGAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0007154 GO:0007165 GO:0007275 GO:0007602 GO:0008150 GO:0009314 GO:0009416 GO:0009581 GO:0009582 GO:0009583 GO:0009585 GO:0009605 GO:0009628 GO:0009639 GO:0009640 GO:0009791 GO:0009889 GO:0009987 GO:0010017 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051606 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071489 GO:0080090 GO:0097159 GO:0104004 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

554

Amino Acids

62.44

Weight (kDa)

5.85

Isoelectric Point (pI)

50.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	177 - 547	2.5e-140	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001368)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G04890 AT5G48150 AT5G48150 AT5G48150 AT5G48150
fragaria_vesca	FvH4_3g24030 FvH4_3g24030 FvH4_3g24030 FvH4_3g24030 FvH4_3g24030 FvH4_3g24030 FvH4_3g24030 FvH4_6g41200
malus_domestica	MD03G1188800.v1.1 MD09G1121700.v1.1 MD11G1204900.v1.1 MD17G1112700.v1.1
prunus_persica	Prupe.3G201900_v2.0.a1 Prupe.3G201900_v2.0.a1 Prupe.3G201900_v2.0.a1 Prupe.3G201900_v2.0.a1 Prupe.3G201900_v2.0.a1 Prupe.4G233000_v2.0.a1 Prupe.4G233000_v2.0.a1 Prupe.4G233000_v2.0.a1 Prupe.4G233000_v2.0.a1 Prupe.4G233000_v2.0.a1 Prupe.4G233000_v2.0.a1 Prupe.4G233000_v2.0.a1
pyrus_communis	pycom09g04610 pycom11g17760 pycom17g10440
rosa_chinensis	RchiOBHm_Chr2g0156761 RchiOBHm_Chr5g0042621
rosa_laevigata	RLG00000020939 RLG00000034144
rosa_multiflora	Rmu_co8517349.1_g000001 Rmu_sc0008149.1_g000012
rosa_roxburghii	Rroxscaffold_1G00038020 Rroxscaffold_2G00092750
rosa_rugosa	Rorug02G0456100 Rorug05G0203300 Rorug05G0203300
rosa_samantha	Rh2AG521600 Rh2BG534900 Rh2CG506500 Rh2DG543900 Rh5AG288400 Rh5BG292500 Rh5CG325000 Rh5DG302400
rosa_wichuraiana	Rw2G043050 Rw5G026760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	222
Acc16I	TGCGCA	1 cut(s)	553
AccB7I	CCANNNNNTGG	1 cut(s)	103
AccBSI	CCGCTC	1 cut(s)	1366
AciI	CCGC	4 cut(s)	1065, 1272, 1366, 1474
AclI	AACGTT	1 cut(s)	216
AclWI	GGATC	3 cut(s)	339, 352, 1376
AcsI	RAATTY	2 cut(s)	24, 794
AcyI	GRCGYC	1 cut(s)	689
AdeI	CACNNNGTG	1 cut(s)	254
AfaI	GTAC	6 cut(s)	142, 305, 380, 803, 1089, 1502
AfiI	CCNNNNNNNGG	1 cut(s)	103
AflIII	ACRYGT	1 cut(s)	804
AgeI	ACCGGT	1 cut(s)	42
AgsI	TTSAA	5 cut(s)	376, 532, 793, 1042, 1574
AhlI	ACTAGT	1 cut(s)	673
AjnI	CCWGG	4 cut(s)	194, 920, 925, 1114
AjuI	GAANNNNNNNTTGG	2 cut(s)	1601, 1633
Alw26I	GTCTC	3 cut(s)	1230, 1575, 1608
AlwI	GGATC	3 cut(s)	339, 352, 1376
AlwNI	CAGNNNCTG	1 cut(s)	505
AoxI	GGCC	1 cut(s)	923
ApeKI	GCWGC	5 cut(s)	132, 271, 1150, 1274, 1540
ApoI	RAATTY	2 cut(s)	24, 794
AsiGI	ACCGGT	1 cut(s)	42
Asp700I	GAANNNNTTC	1 cut(s)	639
AspLEI	GCGC	1 cut(s)	554
AspS9I	GGNCC	4 cut(s)	106, 413, 932, 995
AsuC2I	CCSGG	2 cut(s)	112, 1193
AsuHPI	GGTGA	4 cut(s)	240, 644, 1181, 1249
AvaII	GGWCC	4 cut(s)	106, 413, 932, 995
BaeGI	GKGCMC	1 cut(s)	1591
BamHI	GGATCC	1 cut(s)	344
BauI	CACGAG	1 cut(s)	1448
BbsI	GAAGAC	2 cut(s)	183, 684
BbvI	GCAGC	5 cut(s)	144, 283, 1137, 1261, 1527
BccI	CCATC	4 cut(s)	238, 592, 610, 1538
BciT130I	CCWGG	4 cut(s)	196, 922, 927, 1116
BclI	TGATCA	1 cut(s)	298
BcnI	CCSGG	2 cut(s)	112, 1193
BcoDI	GTCTC	3 cut(s)	1230, 1575, 1608
BcuI	ACTAGT	1 cut(s)	673
BfaI	CTAG	3 cut(s)	252, 674, 1395
BfmI	CTRYAG	1 cut(s)	325
BisI	GCNGC	5 cut(s)	133, 272, 1151, 1275, 1541
BlsI	GCNGC	5 cut(s)	134, 273, 1152, 1276, 1542
Bme1390I	CCNGG	6 cut(s)	112, 196, 922, 927, 1116, 1193
Bme18I	GGWCC	4 cut(s)	106, 413, 932, 995
BmgT120I	GGNCC	4 cut(s)	106, 413, 932, 995
BmiI	GGNNCC	5 cut(s)	108, 346, 414, 820, 1047
BmrFI	CCNGG	6 cut(s)	112, 196, 922, 927, 1116, 1193
BmsI	GCATC	5 cut(s)	17, 352, 713, 926, 1108
BpiI	GAAGAC	2 cut(s)	183, 684
BplI	GAGNNNNNCTC	2 cut(s)	1210, 1242
BpmI	CTGGAG	1 cut(s)	1115
BpuMI	CCSGG	2 cut(s)	112, 1193
BsaBI	GATNNNNATC	1 cut(s)	573
BsaHI	GRCGYC	1 cut(s)	689
BsaJI	CCNNGG	4 cut(s)	110, 985, 1115, 1515
BsaWI	WCCGGW	1 cut(s)	42
Bsc4I	CCNNNNNNNGG	1 cut(s)	103
Bse118I	RCCGGY	1 cut(s)	42
Bse1I	ACTGG	1 cut(s)	59
Bse3DI	GCAATG	3 cut(s)	152, 822, 1488
Bse8I	GATNNNNATC	1 cut(s)	573
BseBI	CCWGG	4 cut(s)	196, 922, 927, 1116
BseDI	CCNNGG	4 cut(s)	110, 985, 1115, 1515
BseGI	GGATG	6 cut(s)	39, 600, 607, 847, 917, 942
BseJI	GATNNNNATC	1 cut(s)	573
BseLI	CCNNNNNNNGG	1 cut(s)	103
BseMI	GCAATG	3 cut(s)	152, 822, 1488
BseMII	CTCAG	2 cut(s)	710, 1196
BseNI	ACTGG	1 cut(s)	59
BseRI	GAGGAG	2 cut(s)	740, 1005
BseSI	GKGCMC	1 cut(s)	1591
BseXI	GCAGC	5 cut(s)	144, 283, 1137, 1261, 1527
BseYI	CCCAGC	2 cut(s)	409, 492
BsgI	GTGCAG	3 cut(s)	163, 1136, 1162
BshFI	GGCC	1 cut(s)	925
BshTI	ACCGGT	1 cut(s)	42
BsiSI	CCGG	3 cut(s)	43, 112, 1192
BslFI	GGGAC	2 cut(s)	475, 510
BslI	CCNNNNNNNGG	1 cut(s)	103
BsmAI	GTCTC	3 cut(s)	1230, 1575, 1608
BsmBI	CGTCTC	1 cut(s)	1575
BsmFI	GGGAC	2 cut(s)	475, 510
BsmI	GAATGC	1 cut(s)	1277
BsnI	GGCC	1 cut(s)	925
Bsp1286I	GDGCHC	1 cut(s)	1591
Bsp143I	GATC	5 cut(s)	298, 344, 574, 1354, 1368
BspACI	CCGC	4 cut(s)	1065, 1272, 1366, 1474
BspANI	GGCC	1 cut(s)	925
BspCNI	CTCAG	2 cut(s)	711, 1195
BspLI	GGNNCC	5 cut(s)	108, 346, 414, 820, 1047
BspPI	GGATC	3 cut(s)	339, 352, 1376
BspQI	GCTCTTC	2 cut(s)	337, 1569
BsrBI	CCGCTC	1 cut(s)	1366
BsrDI	GCAATG	3 cut(s)	152, 822, 1488
BsrFI	RCCGGY	1 cut(s)	42
BsrI	ACTGG	1 cut(s)	59
BssAI	RCCGGY	1 cut(s)	42
BssECI	CCNNGG	4 cut(s)	110, 985, 1115, 1515
BssMI	GATC	5 cut(s)	298, 344, 574, 1354, 1368
BssNI	GRCGYC	1 cut(s)	689
BssSI	CACGAG	1 cut(s)	1448
BssT1I	CCWWGG	1 cut(s)	1515
Bst2BI	CACGAG	1 cut(s)	1448
Bst2UI	CCWGG	4 cut(s)	196, 922, 927, 1116
Bst4CI	ACNGT	4 cut(s)	403, 591, 851, 1500
Bst6I	CTCTTC	3 cut(s)	337, 1350, 1569
BstACI	GRCGYC	1 cut(s)	689
BstAPI	GCANNNNNTGC	1 cut(s)	1159
BstC8I	GCNNGC	4 cut(s)	6, 86, 1029, 1420
BstDEI	CTNAG	3 cut(s)	719, 1023, 1182
BstDSI	CCRYGG	1 cut(s)	985
BstEII	GGTNACC	1 cut(s)	1237
BstF5I	GGATG	6 cut(s)	39, 600, 607, 847, 917, 942
BstHHI	GCGC	1 cut(s)	554
BstKTI	GATC	5 cut(s)	301, 347, 577, 1357, 1371
BstMAI	GTCTC	3 cut(s)	1230, 1575, 1608
BstMBI	GATC	5 cut(s)	298, 344, 574, 1354, 1368
BstMWI	GCNNNNNNNGC	6 cut(s)	686, 818, 1159, 1576, 1631, 1650
BstNI	CCWGG	4 cut(s)	196, 922, 927, 1116
BstNSI	RCATGY	4 cut(s)	763, 808, 1162, 1422
BstPI	GGTNACC	1 cut(s)	1237
BstSCI	CCNGG	6 cut(s)	110, 194, 920, 925, 1114, 1191
BstSFI	CTRYAG	1 cut(s)	325
BstSLI	GKGCMC	1 cut(s)	1591
BstV1I	GCAGC	5 cut(s)	144, 283, 1137, 1261, 1527
BstV2I	GAAGAC	2 cut(s)	183, 684
BstX2I	RGATCY	1 cut(s)	344
BstYI	RGATCY	1 cut(s)	344
BsuRI	GGCC	1 cut(s)	925
BtgI	CCRYGG	1 cut(s)	985
BtsCI	GGATG	6 cut(s)	39, 600, 607, 847, 917, 942
BtsI	GCAGTG	1 cut(s)	1384
BtsIMutI	CAGTG	5 cut(s)	596, 716, 856, 896, 1384
Cac8I	GCNNGC	4 cut(s)	6, 86, 1029, 1420
CaiI	CAGNNNCTG	1 cut(s)	505
CfoI	GCGC	1 cut(s)	554
Cfr10I	RCCGGY	1 cut(s)	42
Cfr13I	GGNCC	4 cut(s)	106, 413, 932, 995
CseI	GACGC	3 cut(s)	678, 1162, 1546
Csp6I	GTAC	6 cut(s)	141, 304, 379, 802, 1088, 1501
CspAI	ACCGGT	1 cut(s)	42
CspCI	CAANNNNNGTGG	2 cut(s)	987, 1022
CviQI	GTAC	6 cut(s)	141, 304, 379, 802, 1088, 1501
DdeI	CTNAG	3 cut(s)	719, 1023, 1182
DpnI	GATC	5 cut(s)	300, 346, 576, 1356, 1370
DpnII	GATC	5 cut(s)	298, 344, 574, 1354, 1368
DraIII	CACNNNGTG	1 cut(s)	254
Eam1104I	CTCTTC	3 cut(s)	337, 1350, 1569
EarI	CTCTTC	3 cut(s)	337, 1350, 1569
Eco130I	CCWWGG	1 cut(s)	1515
Eco147I	AGGCCT	1 cut(s)	925
Eco47I	GGWCC	4 cut(s)	106, 413, 932, 995
Eco91I	GGTNACC	1 cut(s)	1237
EcoO109I	RGGNCCY	1 cut(s)	413
EcoO65I	GGTNACC	1 cut(s)	1237
EcoRII	CCWGG	4 cut(s)	194, 920, 925, 1114
EcoT14I	CCWWGG	1 cut(s)	1515
EcoT22I	ATGCAT	1 cut(s)	765
ErhI	CCWWGG	1 cut(s)	1515
Esp3I	CGTCTC	1 cut(s)	1575
FaqI	GGGAC	2 cut(s)	475, 510
FbaI	TGATCA	1 cut(s)	298
Fnu4HI	GCNGC	5 cut(s)	133, 272, 1151, 1275, 1541
FokI	GGATG	6 cut(s)	46, 607, 614, 854, 904, 929
Fsp4HI	GCNGC	5 cut(s)	133, 272, 1151, 1275, 1541
FspBI	CTAG	3 cut(s)	252, 674, 1395
FspI	TGCGCA	1 cut(s)	553
GlaI	GCGC	1 cut(s)	553
GluI	GCNGC	5 cut(s)	133, 272, 1151, 1275, 1541
GsaI	CCCAGC	2 cut(s)	413, 496
GsuI	CTGGAG	1 cut(s)	1115
HaeIII	GGCC	1 cut(s)	925
HapII	CCGG	3 cut(s)	43, 112, 1192
HgaI	GACGC	3 cut(s)	678, 1162, 1546
HhaI	GCGC	1 cut(s)	554
Hin1I	GRCGYC	1 cut(s)	689
Hin6I	GCGC	1 cut(s)	552
HinP1I	GCGC	1 cut(s)	552
HincII	GTYRAC	1 cut(s)	1408
HindII	GTYRAC	1 cut(s)	1408
HindIII	AAGCTT	2 cut(s)	909, 1025
HpaI	GTTAAC	1 cut(s)	1408
HpaII	CCGG	3 cut(s)	43, 112, 1192
HphI	GGTGA	4 cut(s)	240, 644, 1181, 1249
Hpy166II	GTNNAC	4 cut(s)	635, 856, 932, 1408
Hpy188I	TCNGA	6 cut(s)	298, 645, 1185, 1230, 1350, 1558
Hpy188III	TCNNGA	5 cut(s)	416, 431, 454, 506, 1534
Hpy8I	GTNNAC	4 cut(s)	635, 856, 932, 1408
HpyAV	CCTTC	3 cut(s)	662, 679, 832
HpyCH4III	ACNGT	4 cut(s)	403, 591, 851, 1500
HpyCH4IV	ACGT	2 cut(s)	216, 1086
HpyF10VI	GCNNNNNNNGC	6 cut(s)	686, 818, 1159, 1576, 1631, 1650
HpyF3I	CTNAG	3 cut(s)	719, 1023, 1182
HpySE526I	ACGT	2 cut(s)	216, 1086
Hsp92I	GRCGYC	1 cut(s)	689
HspAI	GCGC	1 cut(s)	552
Ksp22I	TGATCA	1 cut(s)	298
KspAI	GTTAAC	1 cut(s)	1408
Kzo9I	GATC	5 cut(s)	298, 344, 574, 1354, 1368
LguI	GCTCTTC	2 cut(s)	337, 1569
LmnI	GCTCC	6 cut(s)	16, 818, 1096, 1363, 1378, 1517
Lsp1109I	GCAGC	5 cut(s)	144, 283, 1137, 1261, 1527
LweI	GCATC	5 cut(s)	17, 352, 713, 926, 1108
MaeI	CTAG	3 cut(s)	252, 674, 1395
MaeII	ACGT	2 cut(s)	216, 1086
MaeIII	GTNAC	6 cut(s)	606, 701, 895, 1082, 1237, 1339
MalI	GATC	5 cut(s)	300, 346, 576, 1356, 1370
MbiI	CCGCTC	1 cut(s)	1366
MboI	GATC	5 cut(s)	298, 344, 574, 1354, 1368
MboII	GAAGA	7 cut(s)	183, 324, 538, 684, 1337, 1586, 1618
MfeI	CAATTG	1 cut(s)	1332
MflI	RGATCY	1 cut(s)	344
MhlI	GDGCHC	1 cut(s)	1591
MluCI	AATT	8 cut(s)	24, 392, 469, 639, 794, 1306, 1332, 1657
MlyI	GAGTC	5 cut(s)	197, 272, 895, 1336, 1337
Mph1103I	ATGCAT	1 cut(s)	765
MroXI	GAANNNNTTC	1 cut(s)	639
MseI	TTAA	4 cut(s)	581, 1215, 1407, 1508
MslI	CAYNNNNRTG	5 cut(s)	123, 721, 1104, 1319, 1639
MspA1I	CMGCKG	3 cut(s)	492, 1093, 1274
MspI	CCGG	3 cut(s)	43, 112, 1192
MspR9I	CCNGG	6 cut(s)	112, 196, 922, 927, 1116, 1193
MunI	CAATTG	1 cut(s)	1332
Mva1269I	GAATGC	1 cut(s)	1277
MvaI	CCWGG	4 cut(s)	196, 922, 927, 1116
MwoI	GCNNNNNNNGC	6 cut(s)	686, 818, 1159, 1576, 1631, 1650
NciI	CCSGG	2 cut(s)	112, 1193
NdeII	GATC	5 cut(s)	298, 344, 574, 1354, 1368
NlaIV	GGNNCC	5 cut(s)	108, 346, 414, 820, 1047
NmuCI	GTSAC	4 cut(s)	895, 1082, 1237, 1339
NsbI	TGCGCA	1 cut(s)	553
NsiI	ATGCAT	1 cut(s)	765
NspI	RCATGY	4 cut(s)	763, 808, 1162, 1422
PaeI	GCATGC	1 cut(s)	1422
PceI	AGGCCT	1 cut(s)	925
PciI	ACATGT	1 cut(s)	804
PciSI	GCTCTTC	2 cut(s)	337, 1569
PctI	GAATGC	1 cut(s)	1277
PdmI	GAANNNNTTC	1 cut(s)	639
PfeI	GAWTC	6 cut(s)	419, 502, 509, 965, 1186, 1256
PflMI	CCANNNNNTGG	1 cut(s)	103
PinAI	ACCGGT	1 cut(s)	42
PkrI	GCNGC	5 cut(s)	134, 273, 1152, 1276, 1542
PleI	GAGTC	5 cut(s)	196, 272, 894, 1336, 1336
PpsI	GAGTC	5 cut(s)	196, 272, 894, 1336, 1336
PpuMI	RGGWCCY	1 cut(s)	413
PscI	ACATGT	1 cut(s)	804
PsiI	TTATAA	1 cut(s)	222
Psp1406I	AACGTT	1 cut(s)	216
Psp5II	RGGWCCY	1 cut(s)	413
Psp6I	CCWGG	4 cut(s)	194, 920, 925, 1114
PspEI	GGTNACC	1 cut(s)	1237
PspFI	CCCAGC	2 cut(s)	409, 492
PspGI	CCWGG	4 cut(s)	194, 920, 925, 1114
PspN4I	GGNNCC	5 cut(s)	108, 346, 414, 820, 1047
PspPI	GGNCC	4 cut(s)	106, 413, 932, 995
PspPPI	RGGWCCY	1 cut(s)	413
PstNI	CAGNNNCTG	1 cut(s)	505
PsuI	RGATCY	1 cut(s)	344
PvuII	CAGCTG	2 cut(s)	492, 1093
RsaI	GTAC	6 cut(s)	142, 305, 380, 803, 1089, 1502
RsaNI	GTAC	6 cut(s)	141, 304, 379, 802, 1088, 1501
RseI	CAYNNNNRTG	5 cut(s)	123, 721, 1104, 1319, 1639
SapI	GCTCTTC	2 cut(s)	337, 1569
SaqAI	TTAA	4 cut(s)	581, 1215, 1407, 1508
SatI	GCNGC	5 cut(s)	133, 272, 1151, 1275, 1541
Sau3AI	GATC	5 cut(s)	298, 344, 574, 1354, 1368
Sau96I	GGNCC	4 cut(s)	106, 413, 932, 995
SchI	GAGTC	5 cut(s)	197, 272, 895, 1336, 1337
ScrFI	CCNGG	6 cut(s)	112, 196, 922, 927, 1116, 1193
SduI	GDGCHC	1 cut(s)	1591
SfaNI	GCATC	5 cut(s)	17, 352, 713, 926, 1108
SfcI	CTRYAG	1 cut(s)	325
SinI	GGWCC	4 cut(s)	106, 413, 932, 995
SmiMI	CAYNNNNRTG	5 cut(s)	123, 721, 1104, 1319, 1639
SpeI	ACTAGT	1 cut(s)	673
SphI	GCATGC	1 cut(s)	1422
Sse9I	AATT	8 cut(s)	24, 392, 469, 639, 794, 1306, 1332, 1657
SseBI	AGGCCT	1 cut(s)	925
SsiI	CCGC	4 cut(s)	1065, 1272, 1366, 1474
SspI	AATATT	1 cut(s)	427
SspMI	CTAG	3 cut(s)	252, 674, 1395
StuI	AGGCCT	1 cut(s)	925
StyD4I	CCNGG	6 cut(s)	110, 194, 920, 925, 1114, 1191
StyI	CCWWGG	1 cut(s)	1515
TaaI	ACNGT	4 cut(s)	403, 591, 851, 1500
TaiI	ACGT	2 cut(s)	219, 1089
TaqI	TCGA	3 cut(s)	335, 1053, 1111
TaqII	GACCGA	1 cut(s)	866
TasI	AATT	8 cut(s)	24, 392, 469, 639, 794, 1306, 1332, 1657
TatI	WGTACW	1 cut(s)	378
TfiI	GAWTC	6 cut(s)	419, 502, 509, 965, 1186, 1256
Tru1I	TTAA	4 cut(s)	581, 1215, 1407, 1508
Tru9I	TTAA	4 cut(s)	581, 1215, 1407, 1508
TscAI	CASTG	5 cut(s)	596, 723, 856, 896, 1391
TseFI	GTSAC	4 cut(s)	895, 1082, 1237, 1339
TseI	GCWGC	5 cut(s)	132, 271, 1150, 1274, 1540
Tsp45I	GTSAC	4 cut(s)	895, 1082, 1237, 1339
TspDTI	ATGAA	4 cut(s)	183, 276, 851, 1135
TspGWI	ACGGA	3 cut(s)	282, 697, 935
TspRI	CASTG	5 cut(s)	596, 723, 856, 896, 1391
Van91I	CCANNNNNTGG	1 cut(s)	103
VpaK11BI	GGWCC	4 cut(s)	106, 413, 932, 995
XapI	RAATTY	2 cut(s)	24, 794
XceI	RCATGY	4 cut(s)	763, 808, 1162, 1422
XmnI	GAANNNNTTC	1 cut(s)	639
XspI	CTAG	3 cut(s)	252, 674, 1395
Zsp2I	ATGCAT	1 cut(s)	765

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.