Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0001368

Physical Location & Seq

Genomic Coordinates Forward (+)

32456329 .. 32459906

Gene Structure 3578 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g41200.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1656 bp

ATGCAAGCATCAAAGCAGCACAGAAGTTCAGGTATGTCGAAACGGTTGCACTATCAACCGAAGCAAGAAGTAGAAGCCTATTGCTTGCCTCCATTCCGGATCTTGGACCACCAACCAGCATACAATGAGAGCAGCCAAAGTACCCACTCCACGGCTCAGAGTTTCCATGAGAGGTACTGCACATTGGAGTCATCCTCAACAAATGGCAGCTACAACACTCTTTATACCTCCTCATCAACTGTCAGTTTCTCACCCAGCGGAAGCCCGATGTCACAGCATGAGCAAGATTCTCATTACCAGCACCATTCTCCTGATCATATGTACGGCTCTCCAATAAGTGGCTCCTGCATTACTGATGATGCAACCGACTTCAAGTACAAGCTAAAAGAACTAGAAACTGCAATGCTTGGCGATTCCAATATCTTTGACAACTATTGCAGTTCCCTTCAGAATGGGGCAAGAAATACCAGGCCAGAAGTGGACAGCTGGGGACAGATTATGGACTCAATATCTAAGAAGGATTTAAATCAAGTCCTGATCTTCTGTGCAAAAGCAGTAGCGGATAATGATCTGTTGATGGCACAATGGATGATGGATGAATTACGCCAGATGGTTTCGGTTTCTGGGGAACCAATTCAAAGGTTGGGAGCATACATGTTGGAAGGACTAGTTGCGCGTCGAGCATCCTCAGGGAGCAGCATCTGTAAAGCATTGAGATGCAAAGAACCAGCAAGTTCTGAACTCCTGTCTTACATGCATATTCTTTACGAGGTCTGTCCCTACTTCAAGTTTGGGTATATGTCTGCAAATGGAGCCATTGCGGAAGCCATGAAGGATGAAGATAAAGTCCACATCATTGATTTTCAAATTGGTCAGGGGAGTCAGTGGTTGACTTTAATCCAGGCTTTTGCAGCAAGACCTGGAGGACCACCCCATATTCGAATAACCGGGATTGATGATTCGACGTCAGCTTATGCACGAGGTGGAGGACTCAATATTGTGGGAAAGAGGCTATCTAAGCTTGCAGAGATGTTTAAGGTGCCATTTGAGTTCCATGCTGCTGCTATCTCTGGTTGTGATGTTCAGCTGGAGAATCTTGGGGTTAGACCAGGGGAGGCTTTGGCTATGAACTTTGCATTCATGCTGCATCACATGCCAGATGAGAGCGTCAGCACTCAGAATCACCGTGATCGGCTACTGAGGTTGGTTAAGAGCTTGTCTCCAAAAGTTGTGACCCTGGTTGAGCAAGAATCAAACACAAACACTGCTGCATTTTTTCCGAGGTTTGTAGAAACACTAAATTACTACACGGCTATGTTTGAGTCAATAGATGTAACTCTTCCGAGGGATCACAAGGAGAGGATCAATGTTGAGCAACATTGCTTGGCCAAGGAAGTTGTGAACATAATAGCATGCGAGGGAATTGAGAGGGTGGAAAGACATGAGCTTCTCGGGAAGTGGAGGTCGCGGTTTGCAATGGCAGGATTTACTCCATACCCTTTAAGTTCCTTGGTAAATGCAACCATCAAGACACTGCTCAAGAACTACTCAGACAAGTATAGGCTTCAAGAGAGAGATGGTGCGCTCTATCTCGGCTGGAAGAACAGAGATTTGGTTGCTTCTTGTGCATGGAAGTGCAAACCTGGCACCAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0007154 GO:0007165 GO:0007275 GO:0007602 GO:0008150 GO:0009314 GO:0009416 GO:0009581 GO:0009582 GO:0009583 GO:0009585 GO:0009605 GO:0009628 GO:0009639 GO:0009640 GO:0009791 GO:0009889 GO:0009987 GO:0010017 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051606 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071489 GO:0080090 GO:0097159 GO:0104004 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

552

Amino Acids

61.81

Weight (kDa)

6.58

Isoelectric Point (pI)

53.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	176 - 545	3.9e-143	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001368)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G04890 AT5G48150 AT5G48150 AT5G48150 AT5G48150
fragaria_vesca	FvH4_3g24030 FvH4_3g24030 FvH4_3g24030 FvH4_3g24030 FvH4_3g24030 FvH4_3g24030 FvH4_3g24030 FvH4_6g41200
malus_domestica	MD03G1188800.v1.1 MD09G1121700.v1.1 MD11G1204900.v1.1 MD17G1112700.v1.1
prunus_persica	Prupe.3G201900_v2.0.a1 Prupe.3G201900_v2.0.a1 Prupe.3G201900_v2.0.a1 Prupe.3G201900_v2.0.a1 Prupe.3G201900_v2.0.a1 Prupe.4G233000_v2.0.a1 Prupe.4G233000_v2.0.a1 Prupe.4G233000_v2.0.a1 Prupe.4G233000_v2.0.a1 Prupe.4G233000_v2.0.a1 Prupe.4G233000_v2.0.a1 Prupe.4G233000_v2.0.a1
pyrus_communis	pycom09g04610 pycom11g17760 pycom17g10440
rosa_chinensis	RchiOBHm_Chr2g0156761 RchiOBHm_Chr5g0042621
rosa_laevigata	RLG00000020939 RLG00000034144
rosa_multiflora	Rmu_co8517349.1_g000001 Rmu_sc0008149.1_g000012
rosa_roxburghii	Rroxscaffold_1G00038020 Rroxscaffold_2G00092750
rosa_rugosa	Rorug02G0456100 Rorug05G0203300 Rorug05G0203300
rosa_samantha	Rh2AG521600 Rh2BG534900 Rh2CG506500 Rh2DG543900 Rh5AG288400 Rh5BG292500 Rh5CG325000 Rh5DG302400
rosa_wichuraiana	Rw2G043050 Rw5G026760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	968
AccB1I	GGYRCC	2 cut(s)	1039, 1646
AccB7I	CCANNNNNTGG	1 cut(s)	338
AccII	CGCG	2 cut(s)	676, 1468
AccIII	TCCGGA	1 cut(s)	96
AciI	CCGC	4 cut(s)	258, 560, 821, 1468
AclWI	GGATC	3 cut(s)	107, 1356, 1370
AcoI	YGGCCR	1 cut(s)	1386
AcuI	CTGAAG	1 cut(s)	431
AcyI	GRCGYC	1 cut(s)	965
AdeI	CACNNNGTG	1 cut(s)	983
AfaI	GTAC	4 cut(s)	142, 176, 323, 377
AfiI	CCNNNNNNNGG	3 cut(s)	103, 151, 338
AflIII	ACRYGT	1 cut(s)	654
AgsI	TTSAA	5 cut(s)	373, 638, 787, 866, 1568
AhlI	ACTAGT	1 cut(s)	667
AjnI	CCWGG	6 cut(s)	467, 900, 919, 1108, 1236, 1642
AjuI	GAANNNNNNNTTGG	2 cut(s)	1595, 1627
AluBI	AGCT	8 cut(s)	210, 382, 486, 971, 1021, 1087, 1215, 1447
AluI	AGCT	8 cut(s)	210, 382, 486, 971, 1021, 1087, 1215, 1447
Alw26I	GTCTC	1 cut(s)	1224
AlwI	GGATC	3 cut(s)	107, 1356, 1370
AlwNI	CAGNNNCTG	1 cut(s)	702
Ama87I	CYCGRG	1 cut(s)	1451
Aor13HI	TCCGGA	1 cut(s)	96
AoxI	GGCC	2 cut(s)	470, 1386
ApeKI	GCWGC	9 cut(s)	16, 132, 207, 696, 911, 1058, 1061, 1144, 1268
Asp700I	GAANNNNTTC	1 cut(s)	633
AspLEI	GCGC	2 cut(s)	676, 1585
AspS9I	GGNCC	2 cut(s)	106, 926
AsuC2I	CCSGG	1 cut(s)	949
AsuHPI	GGTGA	2 cut(s)	243, 1175
AsuII	TTCGAA	1 cut(s)	940
AvaI	CYCGRG	1 cut(s)	1451
AvaII	GGWCC	2 cut(s)	106, 926
AxyI	CCTNAGG	1 cut(s)	688
BalI	TGGCCA	1 cut(s)	1388
BanI	GGYRCC	2 cut(s)	1039, 1646
BauI	CACGAG	1 cut(s)	978
BbvI	GCAGC	9 cut(s)	28, 144, 219, 708, 923, 1045, 1048, 1131, 1255
BccI	CCATC	5 cut(s)	571, 586, 604, 1532, 1571
BceAI	ACGGC	3 cut(s)	168, 340, 1326
BcgI	CGANNNNNNTGC	2 cut(s)	28, 62
BciT130I	CCWGG	6 cut(s)	469, 902, 921, 1110, 1238, 1644
BclI	TGATCA	1 cut(s)	313
BcnI	CCSGG	1 cut(s)	949
BcoDI	GTCTC	1 cut(s)	1224
BcuI	ACTAGT	1 cut(s)	667
BfaI	CTAG	2 cut(s)	392, 668
BisI	GCNGC	9 cut(s)	17, 133, 208, 697, 912, 1059, 1062, 1145, 1269
BlsI	GCNGC	9 cut(s)	18, 134, 209, 698, 913, 1060, 1063, 1146, 1270
Bme1390I	CCNGG	7 cut(s)	469, 902, 921, 949, 1110, 1238, 1644
Bme18I	GGWCC	2 cut(s)	106, 926
BmeT110I	CYCGRG	1 cut(s)	1451
BmgT120I	GGNCC	2 cut(s)	106, 926
BmiI	GGNNCC	5 cut(s)	343, 630, 814, 1041, 1648
BmrFI	CCNGG	7 cut(s)	469, 902, 921, 949, 1110, 1238, 1644
BmsI	GCATC	6 cut(s)	17, 349, 692, 707, 708, 1156
BplI	GAGNNNNNCTC	4 cut(s)	179, 211, 1204, 1236
BpmI	CTGGAG	2 cut(s)	942, 1109
Bpu14I	TTCGAA	1 cut(s)	940
BpuEI	CTTGAG	1 cut(s)	1523
BpuMI	CCSGG	1 cut(s)	949
BsaBI	GATNNNNATC	2 cut(s)	525, 567
BsaHI	GRCGYC	1 cut(s)	965
BsaJI	CCNNGG	7 cut(s)	150, 1109, 1236, 1280, 1343, 1389, 1509
BsaWI	WCCGGW	1 cut(s)	96
Bsc4I	CCNNNNNNNGG	3 cut(s)	103, 151, 338
Bse21I	CCTNAGG	1 cut(s)	688
Bse3DI	GCAATG	4 cut(s)	408, 816, 1378, 1482
Bse8I	GATNNNNATC	2 cut(s)	525, 567
BseAI	TCCGGA	1 cut(s)	96
BseBI	CCWGG	6 cut(s)	469, 902, 921, 1110, 1238, 1644
BseDI	CCNNGG	7 cut(s)	150, 1109, 1236, 1280, 1343, 1389, 1509
BseGI	GGATG	5 cut(s)	191, 594, 601, 683, 841
BseJI	GATNNNNATC	2 cut(s)	525, 567
BseLI	CCNNNNNNNGG	3 cut(s)	103, 151, 338
BseMI	GCAATG	4 cut(s)	408, 816, 1378, 1482
BseMII	CTCAG	5 cut(s)	170, 702, 1190, 1190, 1563
BseRI	GAGGAG	1 cut(s)	220
BseXI	GCAGC	9 cut(s)	28, 144, 219, 708, 923, 1045, 1048, 1131, 1255
BseYI	CCCAGC	2 cut(s)	254, 486
BsgI	GTGCAG	1 cut(s)	163
Bsh1236I	CGCG	2 cut(s)	676, 1468
BshFI	GGCC	2 cut(s)	472, 1388
BshNI	GGYRCC	2 cut(s)	1039, 1646
BsiHKCI	CYCGRG	1 cut(s)	1451
BsiSI	CCGG	2 cut(s)	97, 948
BslFI	GGGAC	2 cut(s)	504, 762
BslI	CCNNNNNNNGG	3 cut(s)	103, 151, 338
BsmAI	GTCTC	1 cut(s)	1224
BsmFI	GGGAC	2 cut(s)	504, 762
BsmI	GAATGC	1 cut(s)	1136
BsnI	GGCC	2 cut(s)	472, 1388
BsoBI	CYCGRG	1 cut(s)	1451
Bsp119I	TTCGAA	1 cut(s)	940
Bsp13I	TCCGGA	1 cut(s)	96
Bsp143I	GATC	7 cut(s)	99, 313, 537, 568, 1189, 1348, 1362
BspACI	CCGC	4 cut(s)	258, 560, 821, 1468
BspANI	GGCC	2 cut(s)	472, 1388
BspCNI	CTCAG	5 cut(s)	169, 701, 1189, 1191, 1562
BspEI	TCCGGA	1 cut(s)	96
BspFNI	CGCG	2 cut(s)	676, 1468
BspLI	GGNNCC	5 cut(s)	343, 630, 814, 1041, 1648
BspPI	GGATC	3 cut(s)	107, 1356, 1370
BspT104I	TTCGAA	1 cut(s)	940
BspT107I	GGYRCC	2 cut(s)	1039, 1646
BsrDI	GCAATG	4 cut(s)	408, 816, 1378, 1482
BssECI	CCNNGG	7 cut(s)	150, 1109, 1236, 1280, 1343, 1389, 1509
BssMI	GATC	7 cut(s)	99, 313, 537, 568, 1189, 1348, 1362
BssNI	GRCGYC	1 cut(s)	965
BssSI	CACGAG	1 cut(s)	978
BssT1I	CCWWGG	2 cut(s)	1389, 1509
Bst2BI	CACGAG	1 cut(s)	978
Bst2UI	CCWGG	6 cut(s)	469, 902, 921, 1110, 1238, 1644
Bst4CI	ACNGT	3 cut(s)	45, 241, 1187
Bst6I	CTCTTC	1 cut(s)	1344
BstACI	GRCGYC	1 cut(s)	965
BstAPI	GCANNNNNTGC	1 cut(s)	1153
BstBI	TTCGAA	1 cut(s)	940
BstC8I	GCNNGC	4 cut(s)	6, 86, 1023, 1414
BstDEI	CTNAG	7 cut(s)	156, 513, 688, 1017, 1176, 1199, 1549
BstDSI	CCRYGG	1 cut(s)	150
BstF5I	GGATG	5 cut(s)	191, 594, 601, 683, 841
BstFNI	CGCG	2 cut(s)	676, 1468
BstHHI	GCGC	2 cut(s)	676, 1585
BstKTI	GATC	7 cut(s)	102, 316, 540, 571, 1192, 1351, 1365
BstMAI	GTCTC	1 cut(s)	1224
BstMBI	GATC	7 cut(s)	99, 313, 537, 568, 1189, 1348, 1362
BstMWI	GCNNNNNNNGC	7 cut(s)	680, 812, 911, 1018, 1153, 1625, 1644
BstNI	CCWGG	6 cut(s)	469, 902, 921, 1110, 1238, 1644
BstNSI	RCATGY	4 cut(s)	658, 757, 1156, 1416
BstSCI	CCNGG	7 cut(s)	467, 900, 919, 947, 1108, 1236, 1642
BstUI	CGCG	2 cut(s)	676, 1468
BstV1I	GCAGC	9 cut(s)	28, 144, 219, 708, 923, 1045, 1048, 1131, 1255
BstX2I	RGATCY	1 cut(s)	99
BstYI	RGATCY	1 cut(s)	99
Bsu36I	CCTNAGG	1 cut(s)	688
BsuRI	GGCC	2 cut(s)	472, 1388
BtgI	CCRYGG	1 cut(s)	150
BtsCI	GGATG	5 cut(s)	191, 594, 601, 683, 841
BtsI	GCAGTG	2 cut(s)	1263, 1532
BtsIMutI	CAGTG	3 cut(s)	890, 1263, 1532
Cac8I	GCNNGC	4 cut(s)	6, 86, 1023, 1414
CaiI	CAGNNNCTG	1 cut(s)	702
CfoI	GCGC	2 cut(s)	676, 1585
Cfr13I	GGNCC	2 cut(s)	106, 926
CseI	GACGC	2 cut(s)	665, 1156
Csp6I	GTAC	4 cut(s)	141, 175, 322, 376
CviQI	GTAC	4 cut(s)	141, 175, 322, 376
DdeI	CTNAG	7 cut(s)	156, 513, 688, 1017, 1176, 1199, 1549
DpnI	GATC	7 cut(s)	101, 315, 539, 570, 1191, 1350, 1364
DpnII	GATC	7 cut(s)	99, 313, 537, 568, 1189, 1348, 1362
DraI	TTTAAA	1 cut(s)	525
DraIII	CACNNNGTG	1 cut(s)	983
EaeI	YGGCCR	1 cut(s)	1386
Eam1104I	CTCTTC	1 cut(s)	1344
EarI	CTCTTC	1 cut(s)	1344
Eco130I	CCWWGG	2 cut(s)	1389, 1509
Eco47I	GGWCC	2 cut(s)	106, 926
Eco57I	CTGAAG	1 cut(s)	431
Eco81I	CCTNAGG	1 cut(s)	688
Eco88I	CYCGRG	1 cut(s)	1451
EcoRII	CCWGG	6 cut(s)	467, 900, 919, 1108, 1236, 1642
EcoT14I	CCWWGG	2 cut(s)	1389, 1509
EcoT22I	ATGCAT	1 cut(s)	759
ErhI	CCWWGG	2 cut(s)	1389, 1509
FaqI	GGGAC	2 cut(s)	504, 762
FauNDI	CATATG	1 cut(s)	318
FbaI	TGATCA	1 cut(s)	313
Fnu4HI	GCNGC	9 cut(s)	17, 133, 208, 697, 912, 1059, 1062, 1145, 1269
FokI	GGATG	5 cut(s)	178, 601, 608, 670, 848
Fsp4HI	GCNGC	9 cut(s)	17, 133, 208, 697, 912, 1059, 1062, 1145, 1269
FspBI	CTAG	2 cut(s)	392, 668
GlaI	GCGC	2 cut(s)	675, 1584
GluI	GCNGC	9 cut(s)	17, 133, 208, 697, 912, 1059, 1062, 1145, 1269
GsaI	CCCAGC	2 cut(s)	258, 490
GsuI	CTGGAG	2 cut(s)	942, 1109
HaeIII	GGCC	2 cut(s)	472, 1388
HapII	CCGG	2 cut(s)	97, 948
HgaI	GACGC	2 cut(s)	665, 1156
HhaI	GCGC	2 cut(s)	676, 1585
Hin1I	GRCGYC	1 cut(s)	965
Hin6I	GCGC	2 cut(s)	674, 1583
HinP1I	GCGC	2 cut(s)	674, 1583
HincII	GTYRAC	1 cut(s)	891
HindII	GTYRAC	1 cut(s)	891
HindIII	AAGCTT	1 cut(s)	1019
HpaII	CCGG	2 cut(s)	97, 948
HphI	GGTGA	2 cut(s)	243, 1175
Hpy166II	GTNNAC	4 cut(s)	481, 850, 891, 1402
Hpy188I	TCNGA	7 cut(s)	159, 450, 739, 1179, 1281, 1344, 1552
Hpy188III	TCNNGA	7 cut(s)	97, 311, 535, 1453, 1528, 1540, 1568
Hpy8I	GTNNAC	4 cut(s)	481, 850, 891, 1402
Hpy99I	CGWCG	2 cut(s)	681, 967
HpyAV	CCTTC	4 cut(s)	455, 511, 656, 826
HpyCH4III	ACNGT	3 cut(s)	45, 241, 1187
HpyCH4IV	ACGT	1 cut(s)	965
HpyF10VI	GCNNNNNNNGC	7 cut(s)	680, 812, 911, 1018, 1153, 1625, 1644
HpyF3I	CTNAG	7 cut(s)	156, 513, 688, 1017, 1176, 1199, 1549
HpySE526I	ACGT	1 cut(s)	965
Hsp92I	GRCGYC	1 cut(s)	965
HspAI	GCGC	2 cut(s)	674, 1583
Kpn2I	TCCGGA	1 cut(s)	96
Ksp22I	TGATCA	1 cut(s)	313
Kzo9I	GATC	7 cut(s)	99, 313, 537, 568, 1189, 1348, 1362
LmnI	GCTCC	4 cut(s)	347, 647, 693, 812
Lsp1109I	GCAGC	9 cut(s)	28, 144, 219, 708, 923, 1045, 1048, 1131, 1255
LweI	GCATC	6 cut(s)	17, 349, 692, 707, 708, 1156
MaeI	CTAG	2 cut(s)	392, 668
MaeII	ACGT	1 cut(s)	965
MaeIII	GTNAC	3 cut(s)	270, 1231, 1333
MalI	GATC	7 cut(s)	101, 315, 539, 570, 1191, 1350, 1364
MboI	GATC	7 cut(s)	99, 313, 537, 568, 1189, 1348, 1362
MboII	GAAGA	4 cut(s)	532, 851, 1331, 1612
MflI	RGATCY	1 cut(s)	99
MlsI	TGGCCA	1 cut(s)	1388
MluCI	AATT	6 cut(s)	599, 633, 867, 1300, 1422, 1651
MluNI	TGGCCA	1 cut(s)	1388
MlyI	GAGTC	5 cut(s)	197, 497, 889, 984, 1331
MmeI	TCCRAC	1 cut(s)	639
Mox20I	TGGCCA	1 cut(s)	1388
Mph1103I	ATGCAT	1 cut(s)	759
MroI	TCCGGA	1 cut(s)	96
MroXI	GAANNNNTTC	1 cut(s)	633
MscI	TGGCCA	1 cut(s)	1388
MseI	TTAA	5 cut(s)	524, 896, 1035, 1209, 1502
MslI	CAYNNNNRTG	3 cut(s)	715, 1313, 1633
Msp20I	TGGCCA	1 cut(s)	1388
MspA1I	CMGCKG	3 cut(s)	258, 486, 1087
MspI	CCGG	2 cut(s)	97, 948
MspR9I	CCNGG	7 cut(s)	469, 902, 921, 949, 1110, 1238, 1644
Mva1269I	GAATGC	1 cut(s)	1136
MvaI	CCWGG	6 cut(s)	469, 902, 921, 1110, 1238, 1644
MvnI	CGCG	2 cut(s)	676, 1468
MwoI	GCNNNNNNNGC	7 cut(s)	680, 812, 911, 1018, 1153, 1625, 1644
NciI	CCSGG	1 cut(s)	949
NdeI	CATATG	1 cut(s)	318
NdeII	GATC	7 cut(s)	99, 313, 537, 568, 1189, 1348, 1362
NlaIV	GGNNCC	5 cut(s)	343, 630, 814, 1041, 1648
NmeAIII	GCCGAG	1 cut(s)	1572
NmuCI	GTSAC	2 cut(s)	270, 1231
NsiI	ATGCAT	1 cut(s)	759
NspI	RCATGY	4 cut(s)	658, 757, 1156, 1416
NspV	TTCGAA	1 cut(s)	940
PaeI	GCATGC	1 cut(s)	1416
PciI	ACATGT	1 cut(s)	654
PctI	GAATGC	1 cut(s)	1136
PdmI	GAANNNNTTC	1 cut(s)	633
PfeI	GAWTC	6 cut(s)	287, 413, 959, 1093, 1180, 1250
PflMI	CCANNNNNTGG	1 cut(s)	338
PkrI	GCNGC	9 cut(s)	18, 134, 209, 698, 913, 1060, 1063, 1146, 1270
PleI	GAGTC	5 cut(s)	196, 497, 888, 984, 1330
PpsI	GAGTC	5 cut(s)	196, 497, 888, 984, 1330
PscI	ACATGT	1 cut(s)	654
Psp6I	CCWGG	6 cut(s)	467, 900, 919, 1108, 1236, 1642
PspFI	CCCAGC	2 cut(s)	254, 486
PspGI	CCWGG	6 cut(s)	467, 900, 919, 1108, 1236, 1642
PspN4I	GGNNCC	5 cut(s)	343, 630, 814, 1041, 1648
PspPI	GGNCC	2 cut(s)	106, 926
PstNI	CAGNNNCTG	1 cut(s)	702
PsuI	RGATCY	1 cut(s)	99
PvuII	CAGCTG	2 cut(s)	486, 1087
RsaI	GTAC	4 cut(s)	142, 176, 323, 377
RsaNI	GTAC	4 cut(s)	141, 175, 322, 376
RseI	CAYNNNNRTG	3 cut(s)	715, 1313, 1633
SaqAI	TTAA	5 cut(s)	524, 896, 1035, 1209, 1502
SatI	GCNGC	9 cut(s)	17, 133, 208, 697, 912, 1059, 1062, 1145, 1269
Sau3AI	GATC	7 cut(s)	99, 313, 537, 568, 1189, 1348, 1362
Sau96I	GGNCC	2 cut(s)	106, 926
SchI	GAGTC	5 cut(s)	197, 497, 889, 984, 1331
ScrFI	CCNGG	7 cut(s)	469, 902, 921, 949, 1110, 1238, 1644
SfaNI	GCATC	6 cut(s)	17, 349, 692, 707, 708, 1156
SfuI	TTCGAA	1 cut(s)	940
SinI	GGWCC	2 cut(s)	106, 926
SmiI	ATTTAAAT	1 cut(s)	525
SmiMI	CAYNNNNRTG	3 cut(s)	715, 1313, 1633
SmlI	CTYRAG	1 cut(s)	1538
SmoI	CTYRAG	1 cut(s)	1538
SpeI	ACTAGT	1 cut(s)	667
SphI	GCATGC	1 cut(s)	1416
Sse9I	AATT	6 cut(s)	599, 633, 867, 1300, 1422, 1651
SsiI	CCGC	4 cut(s)	258, 560, 821, 1468
SspI	AATATT	1 cut(s)	997
SspMI	CTAG	2 cut(s)	392, 668
StyD4I	CCNGG	7 cut(s)	467, 900, 919, 947, 1108, 1236, 1642
StyI	CCWWGG	2 cut(s)	1389, 1509
SwaI	ATTTAAAT	1 cut(s)	525
TaaI	ACNGT	3 cut(s)	45, 241, 1187
TaiI	ACGT	1 cut(s)	968
TaqI	TCGA	4 cut(s)	38, 679, 940, 962
TasI	AATT	6 cut(s)	599, 633, 867, 1300, 1422, 1651
TatI	WGTACW	1 cut(s)	375
TfiI	GAWTC	6 cut(s)	287, 413, 959, 1093, 1180, 1250
Tru1I	TTAA	5 cut(s)	524, 896, 1035, 1209, 1502
Tru9I	TTAA	5 cut(s)	524, 896, 1035, 1209, 1502
TscAI	CASTG	3 cut(s)	890, 1270, 1539
TseFI	GTSAC	2 cut(s)	270, 1231
TseI	GCWGC	9 cut(s)	16, 132, 207, 696, 911, 1058, 1061, 1144, 1268
Tsp45I	GTSAC	2 cut(s)	270, 1231
TspDTI	ATGAA	5 cut(s)	612, 845, 852, 1129, 1142
TspRI	CASTG	3 cut(s)	890, 1270, 1539
Van91I	CCANNNNNTGG	1 cut(s)	338
VpaK11BI	GGWCC	2 cut(s)	106, 926
XceI	RCATGY	4 cut(s)	658, 757, 1156, 1416
XcmI	CCANNNNNNNNNTGG	1 cut(s)	475
XmnI	GAANNNNTTC	1 cut(s)	633
XspI	CTAG	2 cut(s)	392, 668
ZraI	GACGTC	1 cut(s)	966
Zsp2I	ATGCAT	1 cut(s)	759

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.