AT5G61520
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
24739026 .. 24741401
2376 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G61520.1

Sequence Viewer

Length: 1545 bp
ATGGTAGCAGAAGAAGCAAGAAAAGAAGCCATGGCTAAATCAGTATCTGGCGGGAAGATTACTTATTTTGTGGTGGCTTCATGTGTCATGGCCGCCATGGGCGGTGTCATCTTCGGCTACGACATCGGGGTTTCAGGTGGAGTGATGTCAATGGGGCCATTTCTAAAAAGATTTTTCCCAAAAGTGTATAAGCTCCAAGAAGAAGATAGAAGAAGAAGAGGCAATAGCAATAACCACTACTGCCTTTTCAATAGCCAACTTCTTACATCCTTCACATCTTCTCTATACGTTTCCGGTCTCATCGCTACTCTGTTAGCTTCGTCCGTGACTCGTTCATGGGGTCGCAAGCCCTCTATATTTCTTGGCGGTGTGTCCTTTCTCGCCGGCGCTGCTCTTGGTGGCTCTGCTCAAAACGTTGCTATGCTCATTATTGCGCGTCTCTTGCTCGGCGTAGGAGTTGGATTCGCTAACCAGTCGGTTCCTCTGTATCTCTCCGAGATGGCGCCGGCAAAATACAGAGGAGCAATCAGCAATGGTTTCCAGCTCTGTATCGGAATTGGATTTCTATCTGCAAATGTAATAAACTACGAAACCCAAAATATCAAACATGGTTGGAGAATCTCTTTAGCCACAGCTGCAATACCTGCTTCAATCCTCACTTTAGGATCACTGTTTCTCCCGGAAACGCCGAATAGTATCATCCAGACCACCGGAGATGTTCACAAGACCGAGCTTATGCTTCGCCGTGTCCGTGGAACTAACGACGTTCAAGATGAGCTTACTGATCTCGTTGAAGCGAGTTCTGGTTCTGATACAGATTCAAACGCGTTTTTGAAACTGCTTCAAAGAAAATATAGGCCTGAGTTAGTGATGGCTTTGGTGATACCTTTCTTTCAGCAAGTTACTGGAATCAATGTTGTTGCTTTCTACGCACCGGTTTTGTATAGAACCGTTGGGTTTGGAGAGAGTGGTTCGTTGATGTCGACCCTCGTGACTGGAATCGTGGGAACCTCGTCGACGTTGTTGTCGATGCTTGTCGTTGACAGAATCGGTAGAAAGACTCTGTTTTTGATTGGAGGGTTACAGATGCTCGTGTCGCAAGTTACCATTGGTGTGATCGTTATGGTGGCTGATGTTCACGACGGTGTGATCAAGGAAGGGTATGGTTACGCGGTTGTGGTTTTGGTGTGTGTCTACGTGGCCGGGTTTGGTTGGTCTTGGGGTCCATTAGGATGGCTTGTACCGAGTGAGATTTTTCCGTTGGAGATAAGATCGGTGGCGCAGAGTGTAACTGTGGCAGTGAGTTTTGTGTTTACTTTTGCGGTGGCTCAAAGTGCACCACCGATGTTGTGTAAGTTTCGAGCTGGGATTTTCTTCTTTTATGGAGGGTGGTTGGTGGTAATGACGGTAGCGGTGCAGCTGTTTTTGCCGGAGACTAAGAATGTTCCAATCGAGAAGGTGGTTGGACTTTGGGAGAAGCATTGGTTTTGGAGGAGAATGACGAGCAAGCGTGATATCCAAGAAACCACCATTCTTAGCCATTGA

Protein Analysis

514

Amino Acids

55.87

Weight (kDa)

9.37

Isoelectric Point (pI)

41.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sugar_tr PF00083 28 - 488 4.9e-109 Sugar (and other) transporter
MFS_1 PF07690 89 - 437 8.3e-21 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1024
Acc36I ACCTGC 1 cut(s) 652
AccB1I GGYRCC 1 cut(s) 502
AccI GTMKAC 3 cut(s) 983, 1016, 1194
AccII CGCG 3 cut(s) 436, 827, 1172
AciI CCGC 7 cut(s) 51, 93, 102, 366, 1172, 1322, 1412
AclI AACGTT 1 cut(s) 414
AclWI GGATC 1 cut(s) 673
AcoI YGGCCR 2 cut(s) 90, 1200
AcyI GRCGYC 1 cut(s) 503
AfaI GTAC 1 cut(s) 1242
AflIII ACRYGT 1 cut(s) 825
AgeI ACCGGT 1 cut(s) 934
AgsI TTSAA 7 cut(s) 250, 651, 770, 794, 822, 835, 845
AleI CACNNNNGTG 1 cut(s) 1143
AluBI AGCT 8 cut(s) 193, 317, 544, 635, 733, 778, 1364, 1420
AluI AGCT 8 cut(s) 193, 317, 544, 635, 733, 778, 1364, 1420
Alw21I GWGCWC 1 cut(s) 1339
Alw26I GTCTC 3 cut(s) 302, 443, 1427
Alw44I GTGCAC 1 cut(s) 1335
AlwI GGATC 1 cut(s) 673
AlwNI CAGNNNCTG 1 cut(s) 47
AoxI GGCC 4 cut(s) 90, 155, 857, 1200
ApaLI GTGCAC 1 cut(s) 1335
ApeKI GCWGC 3 cut(s) 389, 635, 1417
ArsI GACNNNNNNTTYG 2 cut(s) 1051, 1083
AsiGI ACCGGT 1 cut(s) 934
AspLEI GCGC 4 cut(s) 389, 436, 505, 1282
AspS9I GGNCC 2 cut(s) 155, 1223
AsuC2I CCSGG 2 cut(s) 680, 1204
AsuHPI GGTGA 1 cut(s) 892
AvaII GGWCC 1 cut(s) 1223
BaeGI GKGCMC 1 cut(s) 1339
BanI GGYRCC 1 cut(s) 502
BauI CACGAG 2 cut(s) 989, 1091
Bbv12I GWGCWC 1 cut(s) 1339
BbvI GCAGC 3 cut(s) 376, 622, 1429
BccI CCATC 3 cut(s) 493, 865, 1227
BceAI ACGGC 1 cut(s) 729
BclI TGATCA 1 cut(s) 1149
BcnI CCSGG 2 cut(s) 680, 1204
BcoDI GTCTC 3 cut(s) 302, 443, 1427
BfoI RGCGCY 2 cut(s) 390, 506
BfuAI ACCTGC 1 cut(s) 652
BisI GCNGC 4 cut(s) 93, 390, 636, 1418
BlsI GCNGC 4 cut(s) 94, 391, 637, 1419
Bme1390I CCNGG 2 cut(s) 680, 1204
Bme18I GGWCC 1 cut(s) 1223
BmgT120I GGNCC 2 cut(s) 155, 1223
BmiI GGNNCC 5 cut(s) 156, 480, 504, 1009, 1224
BmrFI CCNGG 2 cut(s) 680, 1204
BmsI GCATC 2 cut(s) 1020, 1077
BpuMI CCSGG 2 cut(s) 680, 1204
BsaAI YACGTR 1 cut(s) 1198
BsaBI GATNNNNATC 1 cut(s) 565
BsaHI GRCGYC 1 cut(s) 503
BsaI GGTCTC 1 cut(s) 302
BsaJI CCNNGG 3 cut(s) 30, 96, 751
BsaWI WCCGGW 3 cut(s) 293, 710, 934
BsaXI ACNNNNNCTCC 2 cut(s) 660, 690
Bse118I RCCGGY 3 cut(s) 383, 505, 934
Bse1I ACTGG 3 cut(s) 472, 910, 1000
Bse3DI GCAATG 1 cut(s) 538
Bse8I GATNNNNATC 1 cut(s) 565
BseDI CCNNGG 3 cut(s) 30, 96, 751
BseGI GGATG 3 cut(s) 266, 699, 1238
BseJI GATNNNNATC 1 cut(s) 565
BseMI GCAATG 1 cut(s) 538
BseMII CTCAG 1 cut(s) 852
BseNI ACTGG 3 cut(s) 472, 910, 1000
BseRI GAGGAG 2 cut(s) 534, 1507
BseSI GKGCMC 1 cut(s) 1339
BseXI GCAGC 3 cut(s) 376, 622, 1429
BseYI CCCAGC 1 cut(s) 1364
BsgI GTGCAG 1 cut(s) 1436
Bsh1236I CGCG 3 cut(s) 436, 827, 1172
BshFI GGCC 4 cut(s) 92, 157, 859, 1202
BshNI GGYRCC 1 cut(s) 502
BshTI ACCGGT 1 cut(s) 934
BsiHKAI GWGCWC 1 cut(s) 1339
BsiSI CCGG 8 cut(s) 294, 384, 506, 680, 711, 935, 1203, 1430
BsmAI GTCTC 3 cut(s) 302, 443, 1427
BsmBI CGTCTC 1 cut(s) 443
BsnI GGCC 4 cut(s) 92, 157, 859, 1202
Bso31I GGTCTC 1 cut(s) 302
Bsp1286I GDGCHC 1 cut(s) 1339
Bsp143I GATC 5 cut(s) 665, 784, 1116, 1149, 1271
Bsp19I CCATGG 2 cut(s) 30, 96
BspACI CCGC 7 cut(s) 51, 93, 102, 366, 1172, 1322, 1412
BspANI GGCC 4 cut(s) 92, 157, 859, 1202
BspCNI CTCAG 1 cut(s) 853
BspFNI CGCG 3 cut(s) 436, 827, 1172
BspLI GGNNCC 5 cut(s) 156, 480, 504, 1009, 1224
BspMI ACCTGC 1 cut(s) 652
BspPI GGATC 1 cut(s) 673
BspT107I GGYRCC 1 cut(s) 502
BspTNI GGTCTC 1 cut(s) 302
BsrDI GCAATG 1 cut(s) 538
BsrFI RCCGGY 3 cut(s) 383, 505, 934
BsrI ACTGG 3 cut(s) 472, 910, 1000
BssAI RCCGGY 3 cut(s) 383, 505, 934
BssECI CCNNGG 3 cut(s) 30, 96, 751
BssMI GATC 5 cut(s) 665, 784, 1116, 1149, 1271
BssNI GRCGYC 1 cut(s) 503
BssSI CACGAG 2 cut(s) 989, 1091
BssT1I CCWWGG 2 cut(s) 30, 96
Bst2BI CACGAG 2 cut(s) 989, 1091
Bst4CI ACNGT 5 cut(s) 672, 952, 1145, 1294, 1408
Bst6I CTCTTC 1 cut(s) 211
BstACI GRCGYC 1 cut(s) 503
BstAPI GCANNNNNTGC 1 cut(s) 644
BstBAI YACGTR 1 cut(s) 1198
BstC8I GCNNGC 4 cut(s) 347, 385, 507, 1508
BstDEI CTNAG 3 cut(s) 861, 1437, 1535
BstDSI CCRYGG 3 cut(s) 30, 96, 751
BstF5I GGATG 3 cut(s) 266, 699, 1238
BstFNI CGCG 3 cut(s) 436, 827, 1172
BstH2I RGCGCY 2 cut(s) 390, 506
BstHHI GCGC 4 cut(s) 389, 436, 505, 1282
BstKTI GATC 5 cut(s) 668, 787, 1119, 1152, 1274
BstMAI GTCTC 3 cut(s) 302, 443, 1427
BstMBI GATC 5 cut(s) 665, 784, 1116, 1149, 1271
BstMWI GCNNNNNNNGC 9 cut(s) 14, 389, 442, 635, 644, 929, 1096, 1334, 1426
BstSCI CCNGG 2 cut(s) 678, 1202
BstSLI GKGCMC 1 cut(s) 1339
BstUI CGCG 3 cut(s) 436, 827, 1172
BstV1I GCAGC 3 cut(s) 376, 622, 1429
BstXI CCANNNNNNTGG 1 cut(s) 1233
BsuRI GGCC 4 cut(s) 92, 157, 859, 1202
BtgI CCRYGG 3 cut(s) 30, 96, 751
BtgZI GCGATG 1 cut(s) 286
BtsCI GGATG 3 cut(s) 266, 699, 1238
BtsI GCAGTG 1 cut(s) 1305
BtsIMutI CAGTG 2 cut(s) 668, 1305
BveI ACCTGC 1 cut(s) 652
Cac8I GCNNGC 4 cut(s) 347, 385, 507, 1508
CaiI CAGNNNCTG 1 cut(s) 47
CfoI GCGC 4 cut(s) 389, 436, 505, 1282
Cfr10I RCCGGY 3 cut(s) 383, 505, 934
Cfr13I GGNCC 2 cut(s) 155, 1223
CseI GACGC 1 cut(s) 425
Csp6I GTAC 1 cut(s) 1241
CspAI ACCGGT 1 cut(s) 934
CspCI CAANNNNNGTGG 2 cut(s) 1329, 1364
CviAII CATG 6 cut(s) 31, 81, 88, 97, 336, 608
CviQI GTAC 1 cut(s) 1241
DdeI CTNAG 3 cut(s) 861, 1437, 1535
DinI GGCGCC 1 cut(s) 504
DpnI GATC 5 cut(s) 667, 786, 1118, 1151, 1273
DpnII GATC 5 cut(s) 665, 784, 1116, 1149, 1271
DrdI GACNNNNNNGTC 1 cut(s) 1024
DseDI GACNNNNNNGTC 1 cut(s) 1024
EaeI YGGCCR 2 cut(s) 90, 1200
Eam1104I CTCTTC 1 cut(s) 211
EarI CTCTTC 1 cut(s) 211
Eco130I CCWWGG 2 cut(s) 30, 96
Eco147I AGGCCT 1 cut(s) 859
Eco31I GGTCTC 1 cut(s) 302
Eco32I GATATC 1 cut(s) 1516
Eco47I GGWCC 1 cut(s) 1223
EcoRV GATATC 1 cut(s) 1516
EcoT14I CCWWGG 2 cut(s) 30, 96
EgeI GGCGCC 1 cut(s) 504
EheI GGCGCC 1 cut(s) 504
ErhI CCWWGG 2 cut(s) 30, 96
Esp3I CGTCTC 1 cut(s) 443
FaeI CATG 6 cut(s) 34, 84, 91, 100, 339, 611
FalI AAGNNNNNCTT 2 cut(s) 762, 794
FatI CATG 6 cut(s) 30, 80, 87, 96, 335, 607
FauI CCCGC 1 cut(s) 44
FbaI TGATCA 1 cut(s) 1149
FblI GTMKAC 3 cut(s) 983, 1016, 1194
Fnu4HI GCNGC 4 cut(s) 93, 390, 636, 1418
FokI GGATG 3 cut(s) 253, 686, 1245
Fsp4HI GCNGC 4 cut(s) 93, 390, 636, 1418
GlaI GCGC 4 cut(s) 388, 435, 504, 1281
GluI GCNGC 4 cut(s) 93, 390, 636, 1418
GsaI CCCAGC 1 cut(s) 1368
HaeII RGCGCY 2 cut(s) 390, 506
HaeIII GGCC 4 cut(s) 92, 157, 859, 1202
HapII CCGG 8 cut(s) 294, 384, 506, 680, 711, 935, 1203, 1430
HgaI GACGC 1 cut(s) 425
HhaI GCGC 4 cut(s) 389, 436, 505, 1282
Hin1I GRCGYC 1 cut(s) 503
Hin1II CATG 6 cut(s) 34, 84, 91, 100, 339, 611
Hin6I GCGC 4 cut(s) 387, 434, 503, 1280
HinP1I GCGC 4 cut(s) 387, 434, 503, 1280
HincII GTYRAC 3 cut(s) 984, 1017, 1042
HindII GTYRAC 3 cut(s) 984, 1017, 1042
HinfI GANTC 8 cut(s) 328, 462, 618, 818, 909, 999, 1047, 1060
HpaII CCGG 8 cut(s) 294, 384, 506, 680, 711, 935, 1203, 1430
HphI GGTGA 1 cut(s) 892
Hpy166II GTNNAC 8 cut(s) 721, 984, 1017, 1042, 1138, 1195, 1314, 1337
Hpy188I TCNGA 3 cut(s) 496, 554, 811
Hpy188III TCNNGA 5 cut(s) 703, 770, 991, 1139, 1453
Hpy8I GTNNAC 8 cut(s) 721, 984, 1017, 1042, 1138, 1195, 1314, 1337
Hpy99I CGWCG 4 cut(s) 767, 1018, 1021, 1145
HpyAV CCTTC 3 cut(s) 280, 1151, 1450
HpyCH4III ACNGT 5 cut(s) 672, 952, 1145, 1294, 1408
HpyCH4IV ACGT 5 cut(s) 288, 414, 765, 1019, 1197
HpyCH4V TGCA 4 cut(s) 572, 638, 1337, 1417
HpyF10VI GCNNNNNNNGC 9 cut(s) 14, 389, 442, 635, 644, 929, 1096, 1334, 1426
HpyF3I CTNAG 3 cut(s) 861, 1437, 1535
HpySE526I ACGT 5 cut(s) 288, 414, 765, 1019, 1197
Hsp92I GRCGYC 1 cut(s) 503
Hsp92II CATG 6 cut(s) 34, 84, 91, 100, 339, 611
HspAI GCGC 4 cut(s) 387, 434, 503, 1280
KasI GGCGCC 1 cut(s) 502
KroI GCCGGC 2 cut(s) 383, 505
KroNI GCCGGC 2 cut(s) 385, 507
Ksp22I TGATCA 1 cut(s) 1149
Kzo9I GATC 5 cut(s) 665, 784, 1116, 1149, 1271
LmnI GCTCC 2 cut(s) 198, 521
Lsp1109I GCAGC 3 cut(s) 376, 622, 1429
LweI GCATC 2 cut(s) 1020, 1077
MaeII ACGT 5 cut(s) 288, 414, 765, 1019, 1197
MaeIII GTNAC 7 cut(s) 325, 901, 991, 1080, 1102, 1166, 1288
MalI GATC 5 cut(s) 667, 786, 1118, 1151, 1273
MboI GATC 5 cut(s) 665, 784, 1116, 1149, 1271
MhlI GDGCHC 1 cut(s) 1339
MluCI AATT 1 cut(s) 555
MluI ACGCGT 1 cut(s) 825
Mly113I GGCGCC 1 cut(s) 503
MlyI GAGTC 2 cut(s) 322, 1054
MmeI TCCRAC 4 cut(s) 439, 593, 1242, 1444
MreI CGCCGGCG 1 cut(s) 383
MroNI GCCGGC 2 cut(s) 383, 505
MslI CAYNNNNRTG 3 cut(s) 1112, 1143, 1231
MspA1I CMGCKG 2 cut(s) 635, 1420
MspI CCGG 8 cut(s) 294, 384, 506, 680, 711, 935, 1203, 1430
MspR9I CCNGG 2 cut(s) 680, 1204
MvnI CGCG 3 cut(s) 436, 827, 1172
MwoI GCNNNNNNNGC 9 cut(s) 14, 389, 442, 635, 644, 929, 1096, 1334, 1426
NaeI GCCGGC 2 cut(s) 385, 507
NarI GGCGCC 1 cut(s) 503
NciI CCSGG 2 cut(s) 680, 1204
NcoI CCATGG 2 cut(s) 30, 96
NdeII GATC 5 cut(s) 665, 784, 1116, 1149, 1271
NgoMIV GCCGGC 2 cut(s) 383, 505
NlaIII CATG 6 cut(s) 34, 84, 91, 100, 339, 611
NlaIV GGNNCC 5 cut(s) 156, 480, 504, 1009, 1224
NmeAIII GCCGAG 1 cut(s) 426
NmuCI GTSAC 2 cut(s) 325, 991
OliI CACNNNNGTG 1 cut(s) 1143
PceI AGGCCT 1 cut(s) 859
PcsI WCGNNNNNNNCGW 3 cut(s) 748, 980, 1025
PdiI GCCGGC 2 cut(s) 385, 507
PfeI GAWTC 6 cut(s) 462, 618, 818, 909, 999, 1047
PfoI TCCNGGA 1 cut(s) 678
PinAI ACCGGT 1 cut(s) 934
PkrI GCNGC 4 cut(s) 94, 391, 637, 1419
PleI GAGTC 2 cut(s) 322, 1054
PluTI GGCGCC 1 cut(s) 506
PpsI GAGTC 2 cut(s) 322, 1054
Ppu21I YACGTR 1 cut(s) 1198
Psp1406I AACGTT 1 cut(s) 414
PspFI CCCAGC 1 cut(s) 1364
PspN4I GGNNCC 5 cut(s) 156, 480, 504, 1009, 1224
PspPI GGNCC 2 cut(s) 155, 1223
PstNI CAGNNNCTG 1 cut(s) 47
PvuII CAGCTG 2 cut(s) 635, 1420
RsaI GTAC 1 cut(s) 1242
RsaNI GTAC 1 cut(s) 1241
RseI CAYNNNNRTG 3 cut(s) 1112, 1143, 1231
SalI GTCGAC 2 cut(s) 982, 1015
SatI GCNGC 4 cut(s) 93, 390, 636, 1418
Sau3AI GATC 5 cut(s) 665, 784, 1116, 1149, 1271
Sau96I GGNCC 2 cut(s) 155, 1223
SchI GAGTC 2 cut(s) 322, 1054
ScrFI CCNGG 2 cut(s) 680, 1204
SduI GDGCHC 1 cut(s) 1339
SfaNI GCATC 2 cut(s) 1020, 1077
SfoI GGCGCC 1 cut(s) 504
SgrAI CRCCGGYG 1 cut(s) 383
SgrDI CGTCGACG 1 cut(s) 1015
SinI GGWCC 1 cut(s) 1223
SmiMI CAYNNNNRTG 3 cut(s) 1112, 1143, 1231
Sse9I AATT 1 cut(s) 555
SseBI AGGCCT 1 cut(s) 859
SsiI CCGC 7 cut(s) 51, 93, 102, 366, 1172, 1322, 1412
SspDI GGCGCC 1 cut(s) 502
StuI AGGCCT 1 cut(s) 859
StyD4I CCNGG 2 cut(s) 678, 1202
StyI CCWWGG 2 cut(s) 30, 96
TaaI ACNGT 5 cut(s) 672, 952, 1145, 1294, 1408
TaiI ACGT 5 cut(s) 291, 417, 768, 1022, 1200
TaqI TCGA 5 cut(s) 983, 1016, 1028, 1360, 1452
TaqII GACCGA 1 cut(s) 743
TasI AATT 1 cut(s) 555
TauI GCSGC 1 cut(s) 95
TfiI GAWTC 6 cut(s) 462, 618, 818, 909, 999, 1047
TscAI CASTG 2 cut(s) 675, 1305
TseFI GTSAC 2 cut(s) 325, 991
TseI GCWGC 3 cut(s) 389, 635, 1417
Tsp45I GTSAC 2 cut(s) 325, 991
TspDTI ATGAA 2 cut(s) 69, 324
TspGWI ACGGA 3 cut(s) 313, 740, 1248
TspRI CASTG 2 cut(s) 675, 1305
VneI GTGCAC 1 cut(s) 1335
VpaK11BI GGWCC 1 cut(s) 1223
XmiI GTMKAC 3 cut(s) 983, 1016, 1194
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.