FvH4_5g33980
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Reverse (-)
24648039 .. 24650128
2090 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g33980.t1

Sequence Viewer

Length: 1521 bp
ATGGCAGCCGGGTTAGCGATGACAAGTGAGCACAGGCATTACAATGGCAAGTTGACTCTGCTTGTGGTGTTATCTTGCATGATTGCTGCCATGGGAGGTATCATTTTCGGCTATGATATTGGAATTTCAGGTGGAGTGACTTCAATGGAACCATTTCTGAAGAAATTCTTCCCAGAGGTTTACACAAAGATGAAACAAGACGCAAAAGTCAGCAACTACTGCAAATTTGATAGCCCTCTTTTAACCACGTTTACATCCTCTCTCTACATAGCTGGCCTTGTAGCTTCCTTCTTTGCCTCTTCTGTCACCGGAGCATTTGGCCGCAAGCCTTCAATCCTGGTAGCTGGTGCCTCATTCCTTGCTGGTTCAGCTCTAGGTGGCGCAGCTGTTAACTTGTTCATGCTAATAACTGGTCGCATCTTGCTTGGTATTGGAGTTGGCTTTGGAAATCAGGCAGTCCCACTTTATCTCTCAGAAATGGCACCACCAACATTCCGAGGAGCAATCAACATTGGCTTCCAACTATGTGTTGGCATTGGAGTACTGTCAGCTAACCTCATCAACTTTGGCACCGAAAAGATCAAAAGCGGCTGGGGCTGGCGAATCTCCCTAGCCATGGCAGCAGTTCCAGCTTCATTACTTACACTAGGTGCTCTTTTTCTACCAGAAACACCAAACAGCTTAATCCAACGCACAAATGACCACCAAAGAGCCAAGCTGTTGCTACAACGTACACGAGGAATGGAGGATGTGGAAGCAGAACTGGATGATCTCATCGAAGCAAGTAACAGGTCGAAAACAATCGATCACCCTTTCAGGAAAATTGTACAAAGGAAGTATAGGCCTCAACTAGTTATGGCAGTAGCTATGCCATTCTTTACACAGCTGACTGGAATAAATGTCATCTCTTTTTATGCTCCGATCCTTTTTCGGACAATTGGTCTAAGTGAAAGCATGTCACTATTGTGTGCGGTCATTAGCACAGGAGTGGTGGGAACGGCAGCAACATTCATATCAATGCTTATGGTGGACAAACTAGGACGAAGAGCTTTGTTCCAAATAGGAGGTATTCAAATGTTTGTGTCCCAAATCATTGTAGGCTGCATTATGGCAGCTAAGCTTGGTGATGTTGGTGGCTTGAGCAAAGTACATGCATATTTGGTACTGTTCTTCGTGTGCATATATGTAGCCGGGTTTGCGTGGTCTTGGGGACCCCTAGGATGGTTGATTCCGAGTGAGATTTTTCCGTTGGAGATACGATCAGCTGGACAAAGTATTACAGTGGCGGTAAACTTTCTGTTCACTTTTGCTATTGCTCAGACATTTCTTCCTATGCTCTGCTGCTTCAAGTCTGGTATGTTCTTCTTCTTTGGAGGATGGGTGATGGTAATGACTGCATTTGTGTACTTCTTGTTGCCTGAGACTACGAATATTCCTATTGAGAAAATGGATGAAGTTTGGAAAGAGCATTGGTTTTGGAAGAGGATTCTGGGTGAAGGGAGCAAGGACATCCAGCTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

507

Amino Acids

55.21

Weight (kDa)

9.17

Isoelectric Point (pI)

35.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sugar_tr PF00083 26 - 487 2.4e-116 Sugar (and other) transporter
MFS_1 PF07690 81 - 434 1.7e-19 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 206
AccB1I GGYRCC 3 cut(s) 347, 481, 569
AciI CCGC 4 cut(s) 322, 588, 971, 1286
AclWI GGATC 1 cut(s) 916
AcoI YGGCCR 1 cut(s) 319
AcsI RAATTY 3 cut(s) 123, 164, 224
AcuI CTGAAG 1 cut(s) 179
AdeI CACNNNGTG 1 cut(s) 650
AfaI GTAC 6 cut(s) 543, 733, 828, 1149, 1164, 1406
AfiI CCNNNNNNNGG 2 cut(s) 616, 1221
AgsI TTSAA 4 cut(s) 144, 333, 1073, 1348
AhdI GACNNNNNGTC 1 cut(s) 939
AhlI ACTAGT 1 cut(s) 850
AjnI CCWGG 1 cut(s) 336
AleI CACNNNNGTG 2 cut(s) 964, 986
Alw21I GWGCWC 2 cut(s) 33, 655
Alw26I GTCTC 1 cut(s) 1415
AlwI GGATC 1 cut(s) 916
AoxI GGCC 3 cut(s) 274, 319, 842
ApeKI GCWGC 8 cut(s) 5, 86, 383, 620, 1001, 1101, 1112, 1341
ApoI RAATTY 3 cut(s) 123, 164, 224
Asp700I GAANNNNTTC 3 cut(s) 153, 164, 167
AspA2I CCTAGG 1 cut(s) 1216
AspLEI GCGC 1 cut(s) 383
AspS9I GGNCC 1 cut(s) 1211
AsuC2I CCSGG 2 cut(s) 10, 1192
AsuHPI GGTGA 5 cut(s) 298, 800, 1136, 1393, 1505
AvaII GGWCC 1 cut(s) 1211
AvrII CCTAGG 1 cut(s) 1216
BanI GGYRCC 3 cut(s) 347, 481, 569
BauI CACGAG 1 cut(s) 735
Bbv12I GWGCWC 2 cut(s) 33, 655
BbvI GCAGC 8 cut(s) 17, 73, 395, 632, 1013, 1088, 1124, 1328
BccI CCATC 3 cut(s) 1215, 1371, 1378
BceAI ACGGC 1 cut(s) 1014
BciT130I CCWGG 1 cut(s) 338
BcnI CCSGG 2 cut(s) 10, 1192
BcoDI GTCTC 1 cut(s) 1415
BcuI ACTAGT 1 cut(s) 850
BfaI CTAG 6 cut(s) 374, 611, 647, 851, 1037, 1217
BlnI CCTAGG 1 cut(s) 1216
BlpI GCTNAGC 1 cut(s) 1116
BmcAI AGTACT 1 cut(s) 543
Bme1390I CCNGG 3 cut(s) 10, 338, 1192
Bme18I GGWCC 1 cut(s) 1211
BmeRI GACNNNNNGTC 1 cut(s) 939
BmgT120I GGNCC 1 cut(s) 1211
BmiI GGNNCC 6 cut(s) 150, 349, 483, 571, 1212, 1213
BmrFI CCNGG 3 cut(s) 10, 338, 1192
BmsI GCATC 1 cut(s) 426
Bpu1102I GCTNAGC 1 cut(s) 1116
BpuEI CTTGAG 1 cut(s) 1159
BpuMI CCSGG 2 cut(s) 10, 1192
Bsa29I ATCGAT 1 cut(s) 804
BsaJI CCNNGG 4 cut(s) 90, 496, 615, 1216
BsaWI WCCGGW 1 cut(s) 308
BsaXI ACNNNNNCTCC 2 cut(s) 1365, 1395
Bsc4I CCNNNNNNNGG 2 cut(s) 616, 1221
Bse1I ACTGG 3 cut(s) 415, 768, 895
BseBI CCWGG 1 cut(s) 338
BseCI ATCGAT 1 cut(s) 804
BseDI CCNNGG 4 cut(s) 90, 496, 615, 1216
BseGI GGATG 7 cut(s) 254, 754, 772, 1226, 1382, 1456, 1509
BseLI CCNNNNNNNGG 2 cut(s) 616, 1221
BseMII CTCAG 3 cut(s) 486, 1331, 1410
BseNI ACTGG 3 cut(s) 415, 768, 895
BseRI GAGGAG 1 cut(s) 513
BseXI GCAGC 8 cut(s) 17, 73, 395, 632, 1013, 1088, 1124, 1328
BseYI CCCAGC 1 cut(s) 591
BshFI GGCC 3 cut(s) 276, 321, 844
BshNI GGYRCC 3 cut(s) 347, 481, 569
BshVI ATCGAT 1 cut(s) 804
BsiHKAI GWGCWC 2 cut(s) 33, 655
BsiSI CCGG 3 cut(s) 9, 309, 1191
BslFI GGGAC 3 cut(s) 443, 1069, 1224
BslI CCNNNNNNNGG 2 cut(s) 616, 1221
BsmAI GTCTC 1 cut(s) 1415
BsmFI GGGAC 3 cut(s) 443, 1069, 1224
BsnI GGCC 3 cut(s) 276, 321, 844
Bsp1286I GDGCHC 2 cut(s) 33, 655
Bsp1407I TGTACA 1 cut(s) 826
Bsp143I GATC 5 cut(s) 579, 769, 805, 921, 1259
Bsp1720I GCTNAGC 1 cut(s) 1116
Bsp19I CCATGG 2 cut(s) 90, 615
BspACI CCGC 4 cut(s) 322, 588, 971, 1286
BspANI GGCC 3 cut(s) 276, 321, 844
BspCNI CTCAG 3 cut(s) 485, 1330, 1411
BspDI ATCGAT 1 cut(s) 804
BspLI GGNNCC 6 cut(s) 150, 349, 483, 571, 1212, 1213
BspPI GGATC 1 cut(s) 916
BspQI GCTCTTC 1 cut(s) 1039
BspT107I GGYRCC 3 cut(s) 347, 481, 569
BsrGI TGTACA 1 cut(s) 826
BsrI ACTGG 3 cut(s) 415, 768, 895
BssECI CCNNGG 4 cut(s) 90, 496, 615, 1216
BssMI GATC 5 cut(s) 579, 769, 805, 921, 1259
BssSI CACGAG 1 cut(s) 735
BssT1I CCWWGG 3 cut(s) 90, 615, 1216
Bst2BI CACGAG 1 cut(s) 735
Bst2UI CCWGG 1 cut(s) 338
Bst4CI ACNGT 3 cut(s) 546, 1167, 1282
Bst6I CTCTTC 3 cut(s) 304, 1039, 1475
BstAPI GCANNNNNTGC 1 cut(s) 219
BstAUI TGTACA 1 cut(s) 826
BstC8I GCNNGC 3 cut(s) 274, 326, 599
BstDEI CTNAG 5 cut(s) 472, 944, 1116, 1317, 1419
BstDSI CCRYGG 2 cut(s) 90, 615
BstF5I GGATG 7 cut(s) 254, 754, 772, 1226, 1382, 1456, 1509
BstHHI GCGC 1 cut(s) 383
BstKTI GATC 5 cut(s) 582, 772, 808, 924, 1262
BstMAI GTCTC 1 cut(s) 1415
BstMBI GATC 5 cut(s) 579, 769, 805, 921, 1259
BstMWI GCNNNNNNNGC 7 cut(s) 14, 219, 368, 594, 620, 629, 1196
BstNI CCWGG 1 cut(s) 338
BstNSI RCATGY 2 cut(s) 958, 1154
BstSCI CCNGG 3 cut(s) 8, 336, 1190
BstV1I GCAGC 8 cut(s) 17, 73, 395, 632, 1013, 1088, 1124, 1328
Bsu15I ATCGAT 1 cut(s) 804
BsuRI GGCC 3 cut(s) 276, 321, 844
BsuTUI ATCGAT 1 cut(s) 804
BtgI CCRYGG 2 cut(s) 90, 615
BtgZI GCGATG 1 cut(s) 32
BtsCI GGATG 7 cut(s) 254, 754, 772, 1226, 1382, 1456, 1509
BtsIMutI CAGTG 1 cut(s) 1287
Cac8I GCNNGC 3 cut(s) 274, 326, 599
CfoI GCGC 1 cut(s) 383
Cfr13I GGNCC 1 cut(s) 1211
ClaI ATCGAT 1 cut(s) 804
CseI GACGC 1 cut(s) 209
Csp6I GTAC 6 cut(s) 542, 732, 827, 1148, 1163, 1405
CviAII CATG 6 cut(s) 79, 91, 400, 616, 955, 1151
CviQI GTAC 6 cut(s) 542, 732, 827, 1148, 1163, 1405
DdeI CTNAG 5 cut(s) 472, 944, 1116, 1317, 1419
DpnI GATC 5 cut(s) 581, 771, 807, 923, 1261
DpnII GATC 5 cut(s) 579, 769, 805, 921, 1259
DraIII CACNNNGTG 1 cut(s) 650
DrdI GACNNNNNNGTC 1 cut(s) 206
DriI GACNNNNNGTC 1 cut(s) 939
DseDI GACNNNNNNGTC 1 cut(s) 206
EaeI YGGCCR 1 cut(s) 319
Eam1104I CTCTTC 3 cut(s) 304, 1039, 1475
Eam1105I GACNNNNNGTC 1 cut(s) 939
EarI CTCTTC 3 cut(s) 304, 1039, 1475
Eco130I CCWWGG 3 cut(s) 90, 615, 1216
Eco147I AGGCCT 1 cut(s) 844
Eco47I GGWCC 1 cut(s) 1211
Eco57I CTGAAG 1 cut(s) 179
EcoO109I RGGNCCY 1 cut(s) 1211
EcoRII CCWGG 1 cut(s) 336
EcoT14I CCWWGG 3 cut(s) 90, 615, 1216
EcoT22I ATGCAT 1 cut(s) 1156
ErhI CCWWGG 3 cut(s) 90, 615, 1216
FaeI CATG 6 cut(s) 82, 94, 403, 619, 958, 1154
FalI AAGNNNNNCTT 2 cut(s) 152, 184
FaqI GGGAC 3 cut(s) 443, 1069, 1224
FatI CATG 6 cut(s) 78, 90, 399, 615, 954, 1150
FokI GGATG 7 cut(s) 241, 761, 779, 1233, 1389, 1463, 1496
FspBI CTAG 6 cut(s) 374, 611, 647, 851, 1037, 1217
GlaI GCGC 1 cut(s) 382
GsaI CCCAGC 1 cut(s) 595
HaeIII GGCC 3 cut(s) 276, 321, 844
HapII CCGG 3 cut(s) 9, 309, 1191
HgaI GACGC 1 cut(s) 209
HhaI GCGC 1 cut(s) 383
Hin1II CATG 6 cut(s) 82, 94, 403, 619, 958, 1154
Hin6I GCGC 1 cut(s) 381
HinP1I GCGC 1 cut(s) 381
HincII GTYRAC 2 cut(s) 54, 391
HindII GTYRAC 2 cut(s) 54, 391
HindIII AAGCTT 1 cut(s) 1118
HinfI GANTC 4 cut(s) 55, 603, 1228, 1486
HpaI GTTAAC 1 cut(s) 391
HpaII CCGG 3 cut(s) 9, 309, 1191
HphI GGTGA 5 cut(s) 298, 800, 1136, 1393, 1505
Hpy166II GTNNAC 9 cut(s) 54, 181, 252, 391, 734, 1030, 1291, 1302, 1405
Hpy188I TCNGA 7 cut(s) 159, 475, 497, 921, 933, 1233, 1320
Hpy188III TCNNGA 1 cut(s) 817
Hpy8I GTNNAC 9 cut(s) 54, 181, 252, 391, 734, 1030, 1291, 1302, 1405
HpyAV CCTTC 3 cut(s) 298, 339, 1490
HpyCH4III ACNGT 3 cut(s) 546, 1167, 1282
HpyCH4IV ACGT 2 cut(s) 248, 730
HpyCH4V TGCA 6 cut(s) 78, 222, 1104, 1154, 1179, 1397
HpyF10VI GCNNNNNNNGC 7 cut(s) 14, 219, 368, 594, 620, 629, 1196
HpyF3I CTNAG 5 cut(s) 472, 944, 1116, 1317, 1419
HpySE526I ACGT 2 cut(s) 248, 730
Hsp92II CATG 6 cut(s) 82, 94, 403, 619, 958, 1154
HspAI GCGC 1 cut(s) 381
KflI GGGWCCC 1 cut(s) 1211
KspAI GTTAAC 1 cut(s) 391
Kzo9I GATC 5 cut(s) 579, 769, 805, 921, 1259
LguI GCTCTTC 1 cut(s) 1039
LmnI GCTCC 4 cut(s) 311, 500, 922, 1500
Lsp1109I GCAGC 8 cut(s) 17, 73, 395, 632, 1013, 1088, 1124, 1328
LweI GCATC 1 cut(s) 426
MaeI CTAG 6 cut(s) 374, 611, 647, 851, 1037, 1217
MaeII ACGT 2 cut(s) 248, 730
MaeIII GTNAC 4 cut(s) 136, 304, 785, 957
MalI GATC 5 cut(s) 581, 771, 807, 923, 1261
MboI GATC 5 cut(s) 579, 769, 805, 921, 1259
MboII GAAGA 9 cut(s) 160, 172, 291, 1056, 1162, 1319, 1354, 1357, 1492
MfeI CAATTG 1 cut(s) 936
MhlI GDGCHC 2 cut(s) 33, 655
MluCI AATT 5 cut(s) 123, 164, 224, 822, 936
MlyI GAGTC 1 cut(s) 49
MmeI TCCRAC 3 cut(s) 544, 712, 1230
Mph1103I ATGCAT 1 cut(s) 1156
MroXI GAANNNNTTC 3 cut(s) 153, 164, 167
MseI TTAA 3 cut(s) 242, 390, 683
MslI CAYNNNNRTG 5 cut(s) 42, 188, 964, 986, 1016
MspA1I CMGCKG 4 cut(s) 386, 886, 1265, 1516
MspI CCGG 3 cut(s) 9, 309, 1191
MspR9I CCNGG 3 cut(s) 10, 338, 1192
MunI CAATTG 1 cut(s) 936
MvaI CCWGG 1 cut(s) 338
MwoI GCNNNNNNNGC 7 cut(s) 14, 219, 368, 594, 620, 629, 1196
NciI CCSGG 2 cut(s) 10, 1192
NcoI CCATGG 2 cut(s) 90, 615
NdeII GATC 5 cut(s) 579, 769, 805, 921, 1259
NlaIII CATG 6 cut(s) 82, 94, 403, 619, 958, 1154
NlaIV GGNNCC 6 cut(s) 150, 349, 483, 571, 1212, 1213
NmuCI GTSAC 3 cut(s) 136, 304, 957
NsiI ATGCAT 1 cut(s) 1156
NspI RCATGY 2 cut(s) 958, 1154
OliI CACNNNNGTG 2 cut(s) 964, 986
PceI AGGCCT 1 cut(s) 844
PciSI GCTCTTC 1 cut(s) 1039
PdmI GAANNNNTTC 3 cut(s) 153, 164, 167
PfeI GAWTC 3 cut(s) 603, 1228, 1486
PleI GAGTC 1 cut(s) 49
PpsI GAGTC 1 cut(s) 49
PpuMI RGGWCCY 1 cut(s) 1211
Psp5II RGGWCCY 1 cut(s) 1211
Psp6I CCWGG 1 cut(s) 336
PspFI CCCAGC 1 cut(s) 591
PspGI CCWGG 1 cut(s) 336
PspN4I GGNNCC 6 cut(s) 150, 349, 483, 571, 1212, 1213
PspPI GGNCC 1 cut(s) 1211
PspPPI RGGWCCY 1 cut(s) 1211
PvuII CAGCTG 4 cut(s) 386, 886, 1265, 1516
RsaI GTAC 6 cut(s) 543, 733, 828, 1149, 1164, 1406
RsaNI GTAC 6 cut(s) 542, 732, 827, 1148, 1163, 1405
RseI CAYNNNNRTG 5 cut(s) 42, 188, 964, 986, 1016
SapI GCTCTTC 1 cut(s) 1039
SaqAI TTAA 3 cut(s) 242, 390, 683
Sau3AI GATC 5 cut(s) 579, 769, 805, 921, 1259
Sau96I GGNCC 1 cut(s) 1211
ScaI AGTACT 1 cut(s) 543
SchI GAGTC 1 cut(s) 49
ScrFI CCNGG 3 cut(s) 10, 338, 1192
SduI GDGCHC 2 cut(s) 33, 655
SfaNI GCATC 1 cut(s) 426
SinI GGWCC 1 cut(s) 1211
SmiMI CAYNNNNRTG 5 cut(s) 42, 188, 964, 986, 1016
SmlI CTYRAG 1 cut(s) 1138
SmoI CTYRAG 1 cut(s) 1138
SpeI ACTAGT 1 cut(s) 850
Sse9I AATT 5 cut(s) 123, 164, 224, 822, 936
SseBI AGGCCT 1 cut(s) 844
SsiI CCGC 4 cut(s) 322, 588, 971, 1286
SspI AATATT 1 cut(s) 1432
SspMI CTAG 6 cut(s) 374, 611, 647, 851, 1037, 1217
StuI AGGCCT 1 cut(s) 844
StyD4I CCNGG 3 cut(s) 8, 336, 1190
StyI CCWWGG 3 cut(s) 90, 615, 1216
TaaI ACNGT 3 cut(s) 546, 1167, 1282
TaiI ACGT 2 cut(s) 251, 733
TaqI TCGA 3 cut(s) 777, 794, 804
TasI AATT 5 cut(s) 123, 164, 224, 822, 936
TatI WGTACW 4 cut(s) 541, 826, 1147, 1404
TauI GCSGC 2 cut(s) 324, 591
TfiI GAWTC 3 cut(s) 603, 1228, 1486
Tru1I TTAA 3 cut(s) 242, 390, 683
Tru9I TTAA 3 cut(s) 242, 390, 683
TscAI CASTG 1 cut(s) 1287
TseFI GTSAC 3 cut(s) 136, 304, 957
TseI GCWGC 8 cut(s) 5, 86, 383, 620, 1001, 1101, 1112, 1341
Tsp45I GTSAC 3 cut(s) 136, 304, 957
TspDTI ATGAA 5 cut(s) 206, 388, 624, 1000, 1467
TspGWI ACGGA 1 cut(s) 1236
TspRI CASTG 1 cut(s) 1287
VpaK11BI GGWCC 1 cut(s) 1211
XapI RAATTY 3 cut(s) 123, 164, 224
XceI RCATGY 2 cut(s) 958, 1154
XcmI CCANNNNNNNNNTGG 1 cut(s) 527
XmaJI CCTAGG 1 cut(s) 1216
XmnI GAANNNNTTC 3 cut(s) 153, 164, 167
XspI CTAG 6 cut(s) 374, 611, 647, 851, 1037, 1217
ZrmI AGTACT 1 cut(s) 543
Zsp2I ATGCAT 1 cut(s) 1156
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.