Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0007644

Physical Location & Seq

Genomic Coordinates Forward (+)

25587998 .. 25591482

Gene Structure 3485 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G63940.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2118 bp

ATGAAACCGACCGGAGAAGGAGGAGGGGAAGTCGCCGGAGCGGTGGCGGAAGGTTCGGCGTTGTTAATTGTAGGAGTAAAGCCAGATGAATGGAGTAGAGAGGTTCTTACATGGTCTTTGGTGAATGTAGCGCGTCCTGGAGATCGAATCGTTGCTCTTCATGTTCTCGATTATTCTCTAGAGGGCTCAACGTCGCTTATTTCGTTGGTTAGGAATTTTGATACTATGCTTGGTGTTTATGAAAGCTTCTGCAACTTAAAACAGGTAGATTTGAAGTTGAAGGTTTTCAGAGGGAAGTCAGCTAGGAAAGTTCTTGTACAAGAAGTTAAATCGTGTGGAGCTACAAGTTTAATCGTTGGTTCCTCTAGGAAACATCACACTATCCGTTCTTCAGCTTCTTTAGCCAAGTATTGTGCCAGGAATCTTGCCAAGGATGTCTCTGTTTTTGCTGTTAAAAGTGGCAAGATTATGTTCCGCAGAGTACCTAATACCAATGGTGCAGATGGTCCACAGATGAATATTCCCTCTTTAGTTTGTGGATCACCAGATATTGCTATTGAAGCGGCAAAGATTGGAAACAGTTTTAGCCCTGCTAGAACGAGCTCACGCTGGACAAGAACTAGTCGTAGTTCGTCATTGCAGTCTCCTGACAGCTTAGGTGTAGACAATTTGTTGGCTTTAGTGCCAGTACAAACAAATGAGACTGATTCTGGTTCCCTTGAGTCAGGACCAGGTTGGCATTTTCTTCGCGGGCTTTACGGTAATAATCGAAAAAGCTGGACCAAAGTTTCTGCTAAGAAGGCTGTACTTCAGTGGGTTTCGAGGCTGCGAGGTCGGCATTCAGAAACTGTAATCTATCTGGATAGGAAACGGAGTGACTCTGGTTGTGATGAAGATTGCTCTTCTAGTATTGATGGTGAAGATGTTTCTATATCACGGTTTGGTTCTGAGCTTATGCAGTCACCTCTTTCTCCTTTCATTGGATCAAACAACATTCCAGAAGAGCTGGAAGGTCTACATGAAAAGTACTCTTCCACATGTAGATTATTCACATACGAGGAAGTCTTGTCAATTACCTCAAACTTTGCATCTGAGAACTTGGTTGGAGAAGGTGGTAATAGTTATGTTTATAGAGGAGATCTACCAGATGGCAGGGAATTAGCTGTCAAAATATTGAAACCTTGTCTGGATGTGTTGAAGGAATTTATACTGGAAATTGAAGTCATTACCAGTGTACATCACAAAAATATAGTATCTCTCTTTGGTTTCTGTTTCGAGAATAATAATTTGATGCTGGTATACGATTATCTACCACGAGGAAGCCTTGAAGAGAACCTTCATGGCAATAGAAAGGATGCAAAGAAATTTGGCTGGATGGAGAGATATAAGGTGGCAGTGGGTGTTGCCGAGGCGTTAGACTATCTGCATAATACTCATGATCCAGAAGTAATTCACCGGGATGTCAAATCTTCTAATGTTCTTTTGGCAGATGATTTTGAGCCACAGCTCTCAGATTTCGGATTCGCCAGCTTGGCTTCAAGTACCTCACAGCATGTAGCGGGTGGGGATATTGCCGGGACATTTGGTTACCTAGCACCAGAGTACTTCATGCACGGTAAAGTAACCGACAAGATTGATGTCTATGCTTTTGGTGTTGTATTGCTCGAGCTCATATCGGGTAGAAAACCAATCTGCGTCGACCAGTCTAAAGGCCAGGAGAGCCTTGTCTTGTGGGCAAACCCAATTCTAGATAGTGGAAAGTTTGCTCAGTTACTGGATCCCAGTCTAGAAAATGATAACAGTAACGATCTAATCGAGAAACTATTGTTAGCTGCCACGCTATGCATCAAACGCACACCTCATGACCGTCCGCAAATTGGCCTTGTCCTAAAGATATTACAAGGGGAAGAAGAAGCAACAGAGTGGGGAAAGCAACAAGTGAGAGCCTCAGAAGACGTGAGCGCATATTTGACAAATATAGAATCACACATAAACCTCGCATTGCTTGATTTGGAAGATGATGCAGCTTCTGATAGCAGCCCTGAAGCTAGTAGTATCTCTGTTGAGGAATACTTGAAAGGGCGATGGAGCCGCACTGCTAGCTTCAACTTCAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051020 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Usp

Protein Analysis

705

Amino Acids

77.36

Weight (kDa)

5.58

Isoelectric Point (pI)

40.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Usp	PF00582	23 - 148	3.1e-06	Universal stress protein family
Pkinase	PF00069	364 - 624	7.6e-39	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	366 - 627	3.5e-39	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007644)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63940
fragaria_vesca	FvH4_1g24700 FvH4_1g24700 FvH4_1g24700 FvH4_1g24700 FvH4_1g24700
malus_domestica	MD15G1134800.v1.1
prunus_persica	Prupe.4G275600_v2.0.a1
pyrus_communis	pycom15g12160
rosa_chinensis	RchiOBHm_Chr2g0122201
rosa_laevigata	RLG00000018670
rosa_multiflora	Rmu_co8318615.1_g000001 Rmu_sc0003133.1_g000014 Rmu_sc0013150.1_g000002 Rmu_sc0025362.1_g000001
rosa_roxburghii	Rroxscaffold_2G00121770
rosa_rugosa	Rorug02G0237200 Rorug05G0310500
rosa_samantha	Rh2AG295700 Rh2BG304700 Rh2CG283100 Rh2DG319700
rosa_wichuraiana	Rw2G023550 Rw2G023780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	41
AccI	GTMKAC	4 cut(s)	663, 1015, 1299, 1698
AccII	CGCG	2 cut(s)	133, 750
AciI	CCGC	8 cut(s)	41, 47, 475, 563, 750, 1559, 1871, 2092
AclWI	GGATC	5 cut(s)	547, 991, 1433, 1772, 1785
AcsI	RAATTY	3 cut(s)	214, 1202, 1364
AcuI	CTGAAG	3 cut(s)	375, 794, 2064
AfaI	GTAC	8 cut(s)	318, 483, 690, 807, 1028, 1236, 1543, 1604
AfiI	CCNNNNNNNGG	2 cut(s)	980, 1877
AflIII	ACRYGT	1 cut(s)	1037
AhlI	ACTAGT	1 cut(s)	620
AjiI	CACGTC	1 cut(s)	1957
AjnI	CCWGG	4 cut(s)	136, 416, 730, 1713
Alw21I	GWGCWC	2 cut(s)	605, 1671
Alw26I	GTCTC	3 cut(s)	442, 648, 695
AlwI	GGATC	5 cut(s)	547, 991, 1433, 1772, 1785
AlwNI	CAGNNNCTG	3 cut(s)	848, 1774, 2030
Ama87I	CYCGRG	1 cut(s)	1664
AoxI	GGCC	2 cut(s)	1711, 1879
ApeKI	GCWGC	4 cut(s)	826, 1832, 2024, 2037
ApoI	RAATTY	3 cut(s)	214, 1202, 1364
Asp700I	GAANNNNTTC	2 cut(s)	284, 1449
AspLEI	GCGC	2 cut(s)	133, 1964
AspS9I	GGNCC	3 cut(s)	506, 728, 780
AsuC2I	CCSGG	2 cut(s)	1457, 1576
AsuHPI	GGTGA	5 cut(s)	133, 534, 929, 954, 1445
AsuNHI	GCTAGC	1 cut(s)	2099
AvaI	CYCGRG	1 cut(s)	1664
AvaII	GGWCC	3 cut(s)	506, 728, 780
BamHI	GGATCC	1 cut(s)	1777
BanII	GRGCYC	3 cut(s)	188, 605, 1671
BauI	CACGAG	1 cut(s)	1314
BbsI	GAAGAC	1 cut(s)	1959
Bbv12I	GWGCWC	2 cut(s)	605, 1671
BbvI	GCAGC	4 cut(s)	813, 1819, 2036, 2049
BccI	CCATC	5 cut(s)	497, 908, 1142, 1369, 2079
BcgI	CGANNNNNNTGC	2 cut(s)	728, 762
BciT130I	CCWGG	4 cut(s)	138, 418, 732, 1715
BcnI	CCSGG	2 cut(s)	1457, 1576
BcoDI	GTCTC	3 cut(s)	442, 648, 695
BcuI	ACTAGT	1 cut(s)	620
BglI	GCCNNNNNGGC	1 cut(s)	1532
BglII	AGATCT	1 cut(s)	1138
BisI	GCNGC	6 cut(s)	564, 827, 1833, 2025, 2038, 2092
BlsI	GCNGC	6 cut(s)	565, 828, 1834, 2026, 2039, 2093
BmcAI	AGTACT	2 cut(s)	1028, 1604
Bme1390I	CCNGG	6 cut(s)	138, 418, 732, 1457, 1576, 1715
Bme18I	GGWCC	3 cut(s)	506, 728, 780
BmeT110I	CYCGRG	1 cut(s)	1664
BmgBI	CACGTC	1 cut(s)	1957
BmgT120I	GGNCC	3 cut(s)	506, 728, 780
BmiI	GGNNCC	4 cut(s)	361, 715, 1779, 2090
BmrFI	CCNGG	6 cut(s)	138, 418, 732, 1457, 1576, 1715
BmrI	ACTGGG	1 cut(s)	1776
BmsI	GCATC	5 cut(s)	1097, 1281, 1345, 1854, 2011
BmtI	GCTAGC	1 cut(s)	2103
BmuI	ACTGGG	1 cut(s)	1776
BpiI	GAAGAC	1 cut(s)	1959
BpmI	CTGGAG	1 cut(s)	159
Bpu10I	CCTNAGC	1 cut(s)	655
BpuEI	CTTGAG	1 cut(s)	740
BpuMI	CCSGG	2 cut(s)	1457, 1576
BsaJI	CCNNGG	2 cut(s)	429, 1407
BsaWI	WCCGGW	1 cut(s)	11
BsaXI	ACNNNNNCTCC	2 cut(s)	15, 45
Bsc4I	CCNNNNNNNGG	2 cut(s)	980, 1877
Bse1I	ACTGG	6 cut(s)	686, 1215, 1230, 1702, 1779, 1782
Bse3DI	GCAATG	2 cut(s)	635, 2000
BseBI	CCWGG	4 cut(s)	138, 418, 732, 1715
BseDI	CCNNGG	2 cut(s)	429, 1407
BseGI	GGATG	5 cut(s)	439, 1195, 1360, 1380, 1465
BseLI	CCNNNNNNNGG	2 cut(s)	980, 1877
BseMI	GCAATG	2 cut(s)	635, 2000
BseMII	CTCAG	5 cut(s)	939, 1083, 1524, 1781, 1962
BseNI	ACTGG	6 cut(s)	686, 1215, 1230, 1702, 1779, 1782
BseRI	GAGGAG	2 cut(s)	36, 1149
BseXI	GCAGC	4 cut(s)	813, 1819, 2036, 2049
BsgI	GTGCAG	1 cut(s)	519
Bsh1236I	CGCG	2 cut(s)	133, 750
Bsh1285I	CGRYCG	1 cut(s)	12
BshFI	GGCC	2 cut(s)	1713, 1881
BsiEI	CGRYCG	1 cut(s)	12
BsiHKAI	GWGCWC	2 cut(s)	605, 1671
BsiHKCI	CYCGRG	1 cut(s)	1664
BsiSI	CCGG	4 cut(s)	12, 36, 1456, 1575
BslFI	GGGAC	1 cut(s)	1591
BslI	CCNNNNNNNGG	2 cut(s)	980, 1877
BsmAI	GTCTC	3 cut(s)	442, 648, 695
BsmFI	GGGAC	1 cut(s)	1591
BsmI	GAATGC	1 cut(s)	838
BsnI	GGCC	2 cut(s)	1713, 1881
BsoBI	CYCGRG	1 cut(s)	1664
Bsp1286I	GDGCHC	3 cut(s)	188, 605, 1671
Bsp1407I	TGTACA	2 cut(s)	316, 1234
Bsp143I	GATC	7 cut(s)	142, 539, 983, 1138, 1438, 1777, 1807
BspACI	CCGC	8 cut(s)	41, 47, 475, 563, 750, 1559, 1871, 2092
BspANI	GGCC	2 cut(s)	1713, 1881
BspCNI	CTCAG	5 cut(s)	940, 1084, 1523, 1780, 1961
BspFNI	CGCG	2 cut(s)	133, 750
BspHI	TCATGA	2 cut(s)	1435, 1861
BspLI	GGNNCC	4 cut(s)	361, 715, 1779, 2090
BspOI	GCTAGC	1 cut(s)	2103
BspPI	GGATC	5 cut(s)	547, 991, 1433, 1772, 1785
BspQI	GCTCTTC	3 cut(s)	162, 907, 996
BsrBI	CCGCTC	1 cut(s)	41
BsrDI	GCAATG	2 cut(s)	635, 2000
BsrGI	TGTACA	2 cut(s)	316, 1234
BsrI	ACTGG	6 cut(s)	686, 1215, 1230, 1702, 1779, 1782
BssECI	CCNNGG	2 cut(s)	429, 1407
BssMI	GATC	7 cut(s)	142, 539, 983, 1138, 1438, 1777, 1807
BssNAI	GTATAC	1 cut(s)	1300
BssSI	CACGAG	1 cut(s)	1314
BssT1I	CCWWGG	1 cut(s)	429
Bst1107I	GTATAC	1 cut(s)	1300
Bst2BI	CACGAG	1 cut(s)	1314
Bst2UI	CCWGG	4 cut(s)	138, 418, 732, 1715
Bst4CI	ACNGT	7 cut(s)	581, 761, 850, 939, 1616, 1802, 1868
Bst6I	CTCTTC	5 cut(s)	162, 907, 996, 1036, 1323
BstAUI	TGTACA	2 cut(s)	316, 1234
BstC8I	GCNNGC	3 cut(s)	752, 1528, 2101
BstDEI	CTNAG	7 cut(s)	655, 795, 948, 1092, 1510, 1767, 1948
BstEII	GGTNACC	1 cut(s)	1586
BstF5I	GGATG	5 cut(s)	439, 1195, 1360, 1380, 1465
BstFNI	CGCG	2 cut(s)	133, 750
BstHHI	GCGC	2 cut(s)	133, 1964
BstKTI	GATC	7 cut(s)	145, 542, 986, 1141, 1441, 1780, 1810
BstMAI	GTCTC	3 cut(s)	442, 648, 695
BstMBI	GATC	7 cut(s)	142, 539, 983, 1138, 1438, 1777, 1807
BstMCI	CGRYCG	1 cut(s)	12
BstMWI	GCNNNNNNNGC	8 cut(s)	401, 560, 800, 835, 1532, 1719, 1851, 2100
BstNI	CCWGG	4 cut(s)	138, 418, 732, 1715
BstNSI	RCATGY	2 cut(s)	1041, 1556
BstPI	GGTNACC	1 cut(s)	1586
BstSCI	CCNGG	6 cut(s)	136, 416, 730, 1455, 1574, 1713
BstUI	CGCG	2 cut(s)	133, 750
BstV1I	GCAGC	4 cut(s)	813, 1819, 2036, 2049
BstV2I	GAAGAC	1 cut(s)	1959
BstX2I	RGATCY	2 cut(s)	1138, 1777
BstXI	CCANNNNNNTGG	1 cut(s)	90
BstYI	RGATCY	2 cut(s)	1138, 1777
BstZ17I	GTATAC	1 cut(s)	1300
BsuRI	GGCC	2 cut(s)	1713, 1881
BtgZI	GCGATG	1 cut(s)	2098
BtrI	CACGTC	1 cut(s)	1957
BtsCI	GGATG	5 cut(s)	439, 1195, 1360, 1380, 1465
BtsI	GCAGTG	2 cut(s)	1401, 2094
BtsIMutI	CAGTG	4 cut(s)	818, 1237, 1401, 2094
Cac8I	GCNNGC	3 cut(s)	752, 1528, 2101
CaiI	CAGNNNCTG	3 cut(s)	848, 1774, 2030
CciI	TCATGA	2 cut(s)	1435, 1861
CfoI	GCGC	2 cut(s)	133, 1964
Cfr13I	GGNCC	3 cut(s)	506, 728, 780
CseI	GACGC	2 cut(s)	122, 1684
CsiI	ACCWGGT	1 cut(s)	730
Csp6I	GTAC	8 cut(s)	317, 482, 689, 806, 1027, 1235, 1542, 1603
CviAII	CATG	9 cut(s)	111, 161, 1019, 1038, 1340, 1436, 1553, 1609, 1862
CviQI	GTAC	8 cut(s)	317, 482, 689, 806, 1027, 1235, 1542, 1603
DdeI	CTNAG	7 cut(s)	655, 795, 948, 1092, 1510, 1767, 1948
DpnI	GATC	7 cut(s)	144, 541, 985, 1140, 1440, 1779, 1809
DpnII	GATC	7 cut(s)	142, 539, 983, 1138, 1438, 1777, 1807
Eam1104I	CTCTTC	5 cut(s)	162, 907, 996, 1036, 1323
EarI	CTCTTC	5 cut(s)	162, 907, 996, 1036, 1323
EciI	GGCGGA	1 cut(s)	62
Ecl136II	GAGCTC	2 cut(s)	603, 1669
Eco130I	CCWWGG	1 cut(s)	429
Eco24I	GRGCYC	3 cut(s)	188, 605, 1671
Eco47I	GGWCC	3 cut(s)	506, 728, 780
Eco53kI	GAGCTC	2 cut(s)	603, 1669
Eco57I	CTGAAG	3 cut(s)	375, 794, 2064
Eco88I	CYCGRG	1 cut(s)	1664
Eco91I	GGTNACC	1 cut(s)	1586
EcoICRI	GAGCTC	2 cut(s)	603, 1669
EcoO65I	GGTNACC	1 cut(s)	1586
EcoRII	CCWGG	4 cut(s)	136, 416, 730, 1713
EcoT14I	CCWWGG	1 cut(s)	429
EcoT22I	ATGCAT	1 cut(s)	1847
EcoT38I	GRGCYC	3 cut(s)	188, 605, 1671
ErhI	CCWWGG	1 cut(s)	429
FaeI	CATG	9 cut(s)	114, 164, 1022, 1041, 1343, 1439, 1556, 1612, 1865
FalI	AAGNNNNNCTT	2 cut(s)	1320, 1352
FaqI	GGGAC	1 cut(s)	1591
FatI	CATG	9 cut(s)	110, 160, 1018, 1037, 1339, 1435, 1552, 1608, 1861
FauI	CCCGC	2 cut(s)	743, 1552
FblI	GTMKAC	4 cut(s)	663, 1015, 1299, 1698
Fnu4HI	GCNGC	6 cut(s)	564, 827, 1833, 2025, 2038, 2092
FokI	GGATG	5 cut(s)	446, 1202, 1367, 1387, 1472
FriOI	GRGCYC	3 cut(s)	188, 605, 1671
Fsp4HI	GCNGC	6 cut(s)	564, 827, 1833, 2025, 2038, 2092
GlaI	GCGC	2 cut(s)	132, 1963
GluI	GCNGC	6 cut(s)	564, 827, 1833, 2025, 2038, 2092
GsuI	CTGGAG	1 cut(s)	159
HaeIII	GGCC	2 cut(s)	1713, 1881
HapII	CCGG	4 cut(s)	12, 36, 1456, 1575
HgaI	GACGC	2 cut(s)	122, 1684
HhaI	GCGC	2 cut(s)	133, 1964
Hin1II	CATG	9 cut(s)	114, 164, 1022, 1041, 1343, 1439, 1556, 1612, 1865
Hin6I	GCGC	2 cut(s)	131, 1962
HinP1I	GCGC	2 cut(s)	131, 1962
HincII	GTYRAC	1 cut(s)	1699
HindII	GTYRAC	1 cut(s)	1699
HindIII	AAGCTT	1 cut(s)	244
HinfI	GANTC	7 cut(s)	147, 421, 707, 722, 878, 1521, 1982
HpaII	CCGG	4 cut(s)	12, 36, 1456, 1575
HphI	GGTGA	5 cut(s)	133, 534, 929, 954, 1445
Hpy166II	GTNNAC	6 cut(s)	509, 664, 1016, 1235, 1300, 1699
Hpy188I	TCNGA	8 cut(s)	290, 844, 949, 1093, 1513, 1520, 1951, 2032
Hpy8I	GTNNAC	6 cut(s)	509, 664, 1016, 1235, 1300, 1699
Hpy99I	CGWCG	2 cut(s)	196, 1700
HpyAV	CCTTC	8 cut(s)	11, 44, 274, 793, 1004, 1103, 1192, 1346
HpyCH4III	ACNGT	7 cut(s)	581, 761, 850, 939, 1616, 1802, 1868
HpyCH4IV	ACGT	2 cut(s)	191, 1956
HpyF10VI	GCNNNNNNNGC	8 cut(s)	401, 560, 800, 835, 1532, 1719, 1851, 2100
HpyF3I	CTNAG	7 cut(s)	655, 795, 948, 1092, 1510, 1767, 1948
HpySE526I	ACGT	2 cut(s)	191, 1956
Hsp92II	CATG	9 cut(s)	114, 164, 1022, 1041, 1343, 1439, 1556, 1612, 1865
HspAI	GCGC	2 cut(s)	131, 1962
Kzo9I	GATC	7 cut(s)	142, 539, 983, 1138, 1438, 1777, 1807
LguI	GCTCTTC	3 cut(s)	162, 907, 996
LmnI	GCTCC	3 cut(s)	38, 338, 2088
Lsp1109I	GCAGC	4 cut(s)	813, 1819, 2036, 2049
LweI	GCATC	5 cut(s)	1097, 1281, 1345, 1854, 2011
MabI	ACCWGGT	1 cut(s)	730
MaeII	ACGT	2 cut(s)	191, 1956
MaeIII	GTNAC	6 cut(s)	875, 960, 1586, 1621, 1770, 1802
MalI	GATC	7 cut(s)	144, 541, 985, 1140, 1440, 1779, 1809
MbiI	CCGCTC	1 cut(s)	41
MboI	GATC	7 cut(s)	142, 539, 983, 1138, 1438, 1777, 1807
MflI	RGATCY	2 cut(s)	1138, 1777
MhlI	GDGCHC	3 cut(s)	188, 605, 1671
MlyI	GAGTC	2 cut(s)	731, 872
MmeI	TCCRAC	1 cut(s)	1084
Mph1103I	ATGCAT	1 cut(s)	1847
MroXI	GAANNNNTTC	2 cut(s)	284, 1449
MseI	TTAA	5 cut(s)	65, 257, 327, 350, 453
MslI	CAYNNNNRTG	1 cut(s)	1458
MspI	CCGG	4 cut(s)	12, 36, 1456, 1575
MspR9I	CCNGG	6 cut(s)	138, 418, 732, 1457, 1576, 1715
Mva1269I	GAATGC	1 cut(s)	838
MvaI	CCWGG	4 cut(s)	138, 418, 732, 1715
MvnI	CGCG	2 cut(s)	133, 750
MwoI	GCNNNNNNNGC	8 cut(s)	401, 560, 800, 835, 1532, 1719, 1851, 2100
NciI	CCSGG	2 cut(s)	1457, 1576
NdeII	GATC	7 cut(s)	142, 539, 983, 1138, 1438, 1777, 1807
NheI	GCTAGC	1 cut(s)	2099
NlaIII	CATG	9 cut(s)	114, 164, 1022, 1041, 1343, 1439, 1556, 1612, 1865
NlaIV	GGNNCC	4 cut(s)	361, 715, 1779, 2090
NmeAIII	GCCGAG	1 cut(s)	1432
NmuCI	GTSAC	2 cut(s)	875, 960
NsiI	ATGCAT	1 cut(s)	1847
NspI	RCATGY	2 cut(s)	1041, 1556
PaeR7I	CTCGAG	1 cut(s)	1664
PagI	TCATGA	2 cut(s)	1435, 1861
PciI	ACATGT	1 cut(s)	1037
PciSI	GCTCTTC	3 cut(s)	162, 907, 996
PcsI	WCGNNNNNNNCGW	2 cut(s)	200, 1812
PctI	GAATGC	1 cut(s)	838
PdmI	GAANNNNTTC	2 cut(s)	284, 1449
PfeI	GAWTC	5 cut(s)	147, 421, 707, 1521, 1982
PfoI	TCCNGGA	1 cut(s)	136
PkrI	GCNGC	6 cut(s)	565, 828, 1834, 2026, 2039, 2093
PleI	GAGTC	2 cut(s)	730, 872
PpsI	GAGTC	2 cut(s)	730, 872
PscI	ACATGT	1 cut(s)	1037
Psp124BI	GAGCTC	2 cut(s)	605, 1671
Psp6I	CCWGG	4 cut(s)	136, 416, 730, 1713
PspEI	GGTNACC	1 cut(s)	1586
PspGI	CCWGG	4 cut(s)	136, 416, 730, 1713
PspN4I	GGNNCC	4 cut(s)	361, 715, 1779, 2090
PspPI	GGNCC	3 cut(s)	506, 728, 780
PspXI	VCTCGAGB	1 cut(s)	1664
PstNI	CAGNNNCTG	3 cut(s)	848, 1774, 2030
PsuI	RGATCY	2 cut(s)	1138, 1777
RsaI	GTAC	8 cut(s)	318, 483, 690, 807, 1028, 1236, 1543, 1604
RsaNI	GTAC	8 cut(s)	317, 482, 689, 806, 1027, 1235, 1542, 1603
RseI	CAYNNNNRTG	1 cut(s)	1458
SacI	GAGCTC	2 cut(s)	605, 1671
SalI	GTCGAC	1 cut(s)	1697
SapI	GCTCTTC	3 cut(s)	162, 907, 996
SaqAI	TTAA	5 cut(s)	65, 257, 327, 350, 453
SatI	GCNGC	6 cut(s)	564, 827, 1833, 2025, 2038, 2092
Sau3AI	GATC	7 cut(s)	142, 539, 983, 1138, 1438, 1777, 1807
Sau96I	GGNCC	3 cut(s)	506, 728, 780
ScaI	AGTACT	2 cut(s)	1028, 1604
SchI	GAGTC	2 cut(s)	731, 872
ScrFI	CCNGG	6 cut(s)	138, 418, 732, 1457, 1576, 1715
SduI	GDGCHC	3 cut(s)	188, 605, 1671
SexAI	ACCWGGT	1 cut(s)	730
SfaNI	GCATC	5 cut(s)	1097, 1281, 1345, 1854, 2011
Sfr274I	CTCGAG	1 cut(s)	1664
SinI	GGWCC	3 cut(s)	506, 728, 780
SlaI	CTCGAG	1 cut(s)	1664
SmiMI	CAYNNNNRTG	1 cut(s)	1458
SmlI	CTYRAG	2 cut(s)	719, 1664
SmoI	CTYRAG	2 cut(s)	719, 1664
SpeI	ACTAGT	1 cut(s)	620
SsiI	CCGC	8 cut(s)	41, 47, 475, 563, 750, 1559, 1871, 2092
SspI	AATATT	2 cut(s)	520, 1173
SstI	GAGCTC	2 cut(s)	605, 1671
StyD4I	CCNGG	6 cut(s)	136, 416, 730, 1455, 1574, 1713
StyI	CCWWGG	1 cut(s)	429
TaaI	ACNGT	7 cut(s)	581, 761, 850, 939, 1616, 1802, 1868
TaiI	ACGT	2 cut(s)	194, 1959
TaqI	TCGA	8 cut(s)	145, 168, 769, 821, 1275, 1665, 1698, 1815
TatI	WGTACW	6 cut(s)	316, 688, 805, 1026, 1234, 1602
TauI	GCSGC	2 cut(s)	566, 2094
TfiI	GAWTC	5 cut(s)	147, 421, 707, 1521, 1982
Tru1I	TTAA	5 cut(s)	65, 257, 327, 350, 453
Tru9I	TTAA	5 cut(s)	65, 257, 327, 350, 453
TscAI	CASTG	4 cut(s)	818, 1237, 1401, 2101
TseFI	GTSAC	2 cut(s)	875, 960
TseI	GCWGC	4 cut(s)	826, 1832, 2024, 2037
Tsp45I	GTSAC	2 cut(s)	875, 960
TspGWI	ACGGA	2 cut(s)	374, 886
TspRI	CASTG	4 cut(s)	818, 1237, 1401, 2101
VpaK11BI	GGWCC	3 cut(s)	506, 728, 780
XapI	RAATTY	3 cut(s)	214, 1202, 1364
XbaI	TCTAGA	3 cut(s)	178, 1747, 1786
XceI	RCATGY	2 cut(s)	1041, 1556
XhoI	CTCGAG	1 cut(s)	1664
XmiI	GTMKAC	4 cut(s)	663, 1015, 1299, 1698
XmnI	GAANNNNTTC	2 cut(s)	284, 1449
ZrmI	AGTACT	2 cut(s)	1028, 1604
Zsp2I	ATGCAT	1 cut(s)	1847

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.