Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0007644

Physical Location & Seq

Genomic Coordinates Forward (+)

23012977 .. 23017177

Gene Structure 4201 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G275600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2214 bp

ATGAAGTTGTTGACCGGAGAAGGCGGTGGTGGTGGTGGGAAGACGGTGGTGGTCGGGGTGAAGTTAGATTCGCACAGCAAGGAGCTGCTGACGTGGGCACTCGTTAAAGTGGCGGAGCCTGGTGACAATGTCATCGCCATTCATGTCCTTGAGGACCACCTCCACACCCCCTCTGAGGGGACTTCGTCTTTGCTCTCGCTGGTAAAGACATTCGATTCTGTGCTCTCTGCTTATGAAGGTTTCTGCAACTTAAAGCAGGTTGATCTGAAGCTTAAGGTCTGTAGAGGCAATTCTGTCCGGAAGCTTCTAGTACAAGAAGCAAAATCATACAATGCGGCTGCTACAATTGTTGGAACTTCCAAAACTCACCATAGAATCGGGTCATCTGCCTCTGTTGCCAAGTACTGTGCGAGAAAGTTGTCCAGAAGTTTCTCGGTTTTTGCCGTTGATAATGGCAAAGTCGTATTCAAGAGGAACGGACCTGATAGCAATGCAGATAAAATTCAAGATAATGATCAGAACCAGAGTTATGTAAATACTAGTTTGTCACTGATCAAGAATGCAAAAGTACCTAATGATGCTAAACTTAATCAATGTCGACATCTAATAAGAAAACCTTGTTCCAAGTGTGGCAAGAAAACGCTAAAGAGAAATTGTGAGAATTGTGCAGCGGATTCAGTTTTTCGGGGAACCTCTGGGACTCAATTAATTGATGAGTCGGAAGGGGAAGATGGTGAAGAAAATTCACTGGCCTTAGTACCAATCCAAAGACTCGACATTTCATCAAACTCTATCAAGATTCAAGATTCGCAGTGTTTCAAACCTGGTTGGTCACTTCTTCGTCACACATTTCTACCAAAGCGACAATGCATGGAGAAAACTGAGAAAAAGACATCTGTTTTTGGATGGGCCTTGAGACCATTGAGCTGGAATACTTCAGCTGTTGTCTATCCTGATCACAAACTGGTGAATCCTGGACAGGATCAAGATTGTTCTTCCATGCTGAATGGAATAAGTGGAGCAATTGTGCCGTTTGGGCCTAACGCAGTCTGCCCTCCTCTATCTCCTCACCATGGCATGGAGCCCCTTCCTGAAGAATTTTTGGATTTATGTAAGAAATATTCATCCAGTTGTAGACTGTTTTGCTATAAGGAACTTTTGTTGGCGACCTCCAACTTCAGGCCTGAGAACATGGTTGGTAAAGGTGGCAGTAGTAGTGTTTATAGAGGGTGCCTTTCAGATGGCAAAGAGTTGGCAGTGAAACTCTTGAAGCCATCTGGAGATATCTTGAACGAGTTTGTTCATGAAATTGAGATACTCACAACTTTAAACCACAAGAACATAATCTCCTTATTTGGATTCTGCTTCGACGAAAACAACTTACTTTTGGTCTATAATTTTATATCAAGAGGAAGCCTAGAAGAGAACCTCTATGGTAATAAGAAGGATGGGAATGCATTTGGTTGGAAGCAGAGATATAATGTAGCCGTAGGTGTAGCAGAGGCCCTCGATTATCTACACTATGGCTGTGAAGAACCTGTAATCCACAGGGATGTGAAGTCTTCCAACATCCTTCTTTCAGATGATTTTGAGCCACAGCTCTCAGATTTTGGACTTGCTAGTTGGGCATCGACGTCATCCGATATTAGTAGCACAGACGTTGCAGGAACATTTGGTTACTTGGCTCCAGAATACTTCATGCATGGCAAAGTGAGTGATAAAATTGATGTCTATGCATTTGGGGTTGTAGTCCTTGAGCTTCTTTCAGGGAGAAAACCAATCTACAGTAAAGATACAAAGGGCCAGGAAAGTCTGGTGATGTGGGCAAAGCCAATATTGAAGAGTGGGAACGTGGCCCAACTGTTAGATCCGAGCCTGGGTAGTGACTACGACCAGGATCAAATTGAGAGAATGGTTTTGGCTGCTAACCTTTGCATTAGACACACACCTAAGCTTCGGCCTCCGATCAACCTTGTTTTGAAGCTTCTCCAAGGAGATGAGGAAGTTACAAGGTGTGCAAGGCAACAGGTAAGTGCATCAGAAGAACTTGAAGCATTGGACGGAGAAGCACTTCCTTCTGACATTCAATCCCATCTTAACCTTGCGCTGCTAGACTTGGAAGATGATTCCCTTTCTACTAGCAGTGGTGAGCAAAGCATCTCATTAGAAGATTACTTGCAAGGGAGATGGAGCCGCTCGTCAAGCTTTAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051020 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Usp

Protein Analysis

738

Amino Acids

80.93

Weight (kDa)

6.17

Isoelectric Point (pI)

36.71

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007644)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63940
fragaria_vesca	FvH4_1g24700 FvH4_1g24700 FvH4_1g24700 FvH4_1g24700 FvH4_1g24700
malus_domestica	MD15G1134800.v1.1
prunus_persica	Prupe.4G275600_v2.0.a1
pyrus_communis	pycom15g12160
rosa_chinensis	RchiOBHm_Chr2g0122201
rosa_laevigata	RLG00000018670
rosa_multiflora	Rmu_co8318615.1_g000001 Rmu_sc0003133.1_g000014 Rmu_sc0013150.1_g000002 Rmu_sc0025362.1_g000001
rosa_roxburghii	Rroxscaffold_2G00121770
rosa_rugosa	Rorug02G0237200 Rorug05G0310500
rosa_samantha	Rh2AG295700 Rh2BG304700 Rh2CG283100 Rh2DG319700
rosa_wichuraiana	Rw2G023550 Rw2G023780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1637
Acc36I	ACCTGC	1 cut(s)	247
AccB1I	GGYRCC	1 cut(s)	1230
AccB7I	CCANNNNNTGG	1 cut(s)	1078
AccBSI	CCGCTC	1 cut(s)	2196
AccI	GTMKAC	2 cut(s)	598, 1135
AccIII	TCCGGA	1 cut(s)	297
AciI	CCGC	5 cut(s)	24, 113, 335, 671, 2194
AclWI	GGATC	3 cut(s)	990, 1862, 1905
AcsI	RAATTY	3 cut(s)	501, 742, 1097
AcuI	CTGAAG	4 cut(s)	287, 921, 1113, 1162
AcyI	GRCGYC	1 cut(s)	1634
AfaI	GTAC	4 cut(s)	312, 404, 570, 759
AfiI	CCNNNNNNNGG	7 cut(s)	175, 176, 177, 1073, 1078, 1179, 1877
AflII	CTTAAG	1 cut(s)	272
AhlI	ACTAGT	1 cut(s)	539
AjiI	CACGTC	1 cut(s)	93
AjnI	CCWGG	6 cut(s)	118, 823, 973, 1803, 1875, 1893
AloI	GAACNNNNNNTCC	4 cut(s)	1331, 1363, 1527, 1559
Alw21I	GWGCWC	1 cut(s)	225
Alw26I	GTCTC	1 cut(s)	910
AlwI	GGATC	3 cut(s)	990, 1862, 1905
Aor13HI	TCCGGA	1 cut(s)	297
AoxI	GGCC	8 cut(s)	750, 909, 1037, 1181, 1503, 1801, 1854, 1958
ApeKI	GCWGC	5 cut(s)	85, 338, 668, 1922, 2107
ApoI	RAATTY	3 cut(s)	501, 742, 1097
ArsI	GACNNNNNNTTYG	2 cut(s)	172, 204
AseI	ATTAAT	1 cut(s)	707
Asp700I	GAANNNNTTC	1 cut(s)	2070
AspLEI	GCGC	1 cut(s)	2107
AspS9I	GGNCC	7 cut(s)	154, 479, 909, 1037, 1504, 1801, 1855
AsuHPI	GGTGA	8 cut(s)	70, 134, 359, 746, 979, 1061, 1828, 2159
AvaII	GGWCC	2 cut(s)	154, 479
BaeGI	GKGCMC	1 cut(s)	100
BanI	GGYRCC	1 cut(s)	1230
BanII	GRGCYC	1 cut(s)	1086
BbsI	GAAGAC	2 cut(s)	47, 1554
Bbv12I	GWGCWC	1 cut(s)	225
BbvI	GCAGC	5 cut(s)	72, 325, 680, 1909, 2094
BccI	CCATC	7 cut(s)	725, 900, 1235, 1282, 1442, 2100, 2181
BceAI	ACGGC	3 cut(s)	428, 1015, 1472
BciT130I	CCWGG	6 cut(s)	120, 825, 975, 1805, 1877, 1895
BclI	TGATCA	3 cut(s)	514, 552, 955
BcoDI	GTCTC	1 cut(s)	910
BcuI	ACTAGT	1 cut(s)	539
BfaI	CTAG	7 cut(s)	308, 540, 1418, 1620, 2111, 2139, 2212
BfmI	CTRYAG	2 cut(s)	280, 1783
BfrI	CTTAAG	1 cut(s)	272
BfuAI	ACCTGC	1 cut(s)	247
BglI	GCCNNNNNGGC	1 cut(s)	1036
BisI	GCNGC	7 cut(s)	86, 336, 339, 669, 1923, 2108, 2194
BlsI	GCNGC	7 cut(s)	87, 337, 340, 670, 1924, 2109, 2195
BmcAI	AGTACT	1 cut(s)	404
Bme1390I	CCNGG	6 cut(s)	120, 825, 975, 1805, 1877, 1895
Bme18I	GGWCC	2 cut(s)	154, 479
BmgBI	CACGTC	1 cut(s)	93
BmgT120I	GGNCC	7 cut(s)	154, 479, 909, 1037, 1504, 1801, 1855
BmiI	GGNNCC	6 cut(s)	117, 691, 1083, 1232, 1686, 2192
BmrFI	CCNGG	6 cut(s)	120, 825, 975, 1805, 1877, 1895
BmsI	GCATC	4 cut(s)	568, 1637, 2045, 2166
BpiI	GAAGAC	2 cut(s)	47, 1554
BpmI	CTGGAG	2 cut(s)	1299, 1671
Bpu10I	CCTNAGC	1 cut(s)	1950
BpuEI	CTTGAG	3 cut(s)	170, 934, 1775
BsaBI	GATNNNNATC	1 cut(s)	513
BsaHI	GRCGYC	1 cut(s)	1634
BsaI	GGTCTC	1 cut(s)	910
BsaJI	CCNNGG	3 cut(s)	1072, 1876, 1990
BsaWI	WCCGGW	2 cut(s)	14, 297
BsaXI	ACNNNNNCTCC	4 cut(s)	1011, 1041, 1331, 1361
Bsc4I	CCNNNNNNNGG	7 cut(s)	175, 176, 177, 1073, 1078, 1179, 1877
Bse1I	ACTGG	3 cut(s)	753, 969, 1128
Bse3DI	GCAATG	1 cut(s)	496
Bse8I	GATNNNNATC	1 cut(s)	513
BseAI	TCCGGA	1 cut(s)	297
BseBI	CCWGG	6 cut(s)	120, 825, 975, 1805, 1877, 1895
BseDI	CCNNGG	3 cut(s)	1072, 1876, 1990
BseGI	GGATG	6 cut(s)	911, 1124, 1453, 1558, 1569, 1637
BseJI	GATNNNNATC	1 cut(s)	513
BseLI	CCNNNNNNNGG	7 cut(s)	175, 176, 177, 1073, 1078, 1179, 1877
BseMI	GCAATG	1 cut(s)	496
BseMII	CTCAG	4 cut(s)	165, 873, 1176, 1617
BseNI	ACTGG	3 cut(s)	753, 969, 1128
BseRI	GAGGAG	2 cut(s)	1047, 1056
BseSI	GKGCMC	1 cut(s)	100
BseXI	GCAGC	5 cut(s)	72, 325, 680, 1909, 2094
BsgI	GTGCAG	1 cut(s)	687
BshFI	GGCC	8 cut(s)	752, 911, 1039, 1183, 1505, 1803, 1856, 1960
BshNI	GGYRCC	1 cut(s)	1230
BsiHKAI	GWGCWC	1 cut(s)	225
BsiSI	CCGG	2 cut(s)	15, 298
BslFI	GGGAC	2 cut(s)	193, 712
BslI	CCNNNNNNNGG	7 cut(s)	175, 176, 177, 1073, 1078, 1179, 1877
BsmAI	GTCTC	1 cut(s)	910
BsmFI	GGGAC	2 cut(s)	193, 712
BsmI	GAATGC	2 cut(s)	565, 1459
BsnI	GGCC	8 cut(s)	752, 911, 1039, 1183, 1505, 1803, 1856, 1960
Bso31I	GGTCTC	1 cut(s)	910
Bsp1286I	GDGCHC	3 cut(s)	100, 225, 1086
Bsp13I	TCCGGA	1 cut(s)	297
Bsp143I	GATC	8 cut(s)	262, 514, 552, 955, 982, 1867, 1897, 1965
Bsp19I	CCATGG	1 cut(s)	1072
BspACI	CCGC	5 cut(s)	24, 113, 335, 671, 2194
BspANI	GGCC	8 cut(s)	752, 911, 1039, 1183, 1505, 1803, 1856, 1960
BspCNI	CTCAG	4 cut(s)	166, 874, 1177, 1616
BspEI	TCCGGA	1 cut(s)	297
BspHI	TCATGA	1 cut(s)	1303
BspLI	GGNNCC	6 cut(s)	117, 691, 1083, 1232, 1686, 2192
BspMI	ACCTGC	1 cut(s)	247
BspPI	GGATC	3 cut(s)	990, 1862, 1905
BspT107I	GGYRCC	1 cut(s)	1230
BspTI	CTTAAG	1 cut(s)	272
BspTNI	GGTCTC	1 cut(s)	910
BsrBI	CCGCTC	1 cut(s)	2196
BsrDI	GCAATG	1 cut(s)	496
BsrI	ACTGG	3 cut(s)	753, 969, 1128
BssECI	CCNNGG	3 cut(s)	1072, 1876, 1990
BssMI	GATC	8 cut(s)	262, 514, 552, 955, 982, 1867, 1897, 1965
BssNI	GRCGYC	1 cut(s)	1634
BssT1I	CCWWGG	2 cut(s)	1072, 1990
Bst2UI	CCWGG	6 cut(s)	120, 825, 975, 1805, 1877, 1895
Bst4CI	ACNGT	5 cut(s)	46, 407, 1140, 1787, 1863
Bst6I	CTCTTC	2 cut(s)	1416, 1835
BstACI	GRCGYC	1 cut(s)	1634
BstAFI	CTTAAG	1 cut(s)	272
BstDEI	CTNAG	6 cut(s)	174, 754, 882, 1185, 1603, 1950
BstDSI	CCRYGG	1 cut(s)	1072
BstF5I	GGATG	6 cut(s)	911, 1124, 1453, 1558, 1569, 1637
BstHHI	GCGC	1 cut(s)	2107
BstKTI	GATC	8 cut(s)	265, 517, 555, 958, 985, 1870, 1900, 1968
BstMAI	GTCTC	1 cut(s)	910
BstMBI	GATC	8 cut(s)	262, 514, 552, 955, 982, 1867, 1897, 1965
BstMWI	GCNNNNNNNGC	4 cut(s)	395, 1036, 1625, 2202
BstNI	CCWGG	6 cut(s)	120, 825, 975, 1805, 1877, 1895
BstSCI	CCNGG	6 cut(s)	118, 823, 973, 1803, 1875, 1893
BstSFI	CTRYAG	2 cut(s)	280, 1783
BstSLI	GKGCMC	1 cut(s)	100
BstV1I	GCAGC	5 cut(s)	72, 325, 680, 1909, 2094
BstV2I	GAAGAC	2 cut(s)	47, 1554
BstX2I	RGATCY	1 cut(s)	1867
BstXI	CCANNNNNNTGG	1 cut(s)	927
BstYI	RGATCY	1 cut(s)	1867
BsuRI	GGCC	8 cut(s)	752, 911, 1039, 1183, 1505, 1803, 1856, 1960
BtgI	CCRYGG	1 cut(s)	1072
BtgZI	GCGATG	1 cut(s)	118
BtrI	CACGTC	1 cut(s)	93
BtsCI	GGATG	6 cut(s)	911, 1124, 1453, 1558, 1569, 1637
BtsI	GCAGTG	3 cut(s)	818, 1263, 2149
BtsIMutI	CAGTG	5 cut(s)	548, 746, 818, 1263, 2149
BveI	ACCTGC	1 cut(s)	247
CciI	TCATGA	1 cut(s)	1303
CfoI	GCGC	1 cut(s)	2107
Cfr13I	GGNCC	7 cut(s)	154, 479, 909, 1037, 1504, 1801, 1855
CsiI	ACCWGGT	1 cut(s)	823
Csp6I	GTAC	4 cut(s)	311, 403, 569, 758
CviAII	CATG	9 cut(s)	143, 871, 1000, 1073, 1078, 1192, 1304, 1699, 1703
CviQI	GTAC	4 cut(s)	311, 403, 569, 758
DdeI	CTNAG	6 cut(s)	174, 754, 882, 1185, 1603, 1950
DpnI	GATC	8 cut(s)	264, 516, 554, 957, 984, 1869, 1899, 1967
DpnII	GATC	8 cut(s)	262, 514, 552, 955, 982, 1867, 1897, 1965
DraI	TTTAAA	1 cut(s)	1329
Eam1104I	CTCTTC	2 cut(s)	1416, 1835
EarI	CTCTTC	2 cut(s)	1416, 1835
EciI	GGCGGA	1 cut(s)	128
Eco130I	CCWWGG	2 cut(s)	1072, 1990
Eco147I	AGGCCT	1 cut(s)	1183
Eco24I	GRGCYC	1 cut(s)	1086
Eco31I	GGTCTC	1 cut(s)	910
Eco32I	GATATC	1 cut(s)	1285
Eco47I	GGWCC	2 cut(s)	154, 479
Eco57I	CTGAAG	4 cut(s)	287, 921, 1113, 1162
EcoO109I	RGGNCCY	1 cut(s)	1504
EcoRII	CCWGG	6 cut(s)	118, 823, 973, 1803, 1875, 1893
EcoRV	GATATC	1 cut(s)	1285
EcoT14I	CCWWGG	2 cut(s)	1072, 1990
EcoT22I	ATGCAT	4 cut(s)	872, 1459, 1704, 1738
EcoT38I	GRGCYC	1 cut(s)	1086
ErhI	CCWWGG	2 cut(s)	1072, 1990
FaeI	CATG	9 cut(s)	146, 874, 1003, 1076, 1081, 1195, 1307, 1702, 1706
FalI	AAGNNNNNCTT	2 cut(s)	601, 633
FaqI	GGGAC	2 cut(s)	193, 712
FatI	CATG	9 cut(s)	142, 870, 999, 1072, 1077, 1191, 1303, 1698, 1702
FbaI	TGATCA	3 cut(s)	514, 552, 955
FblI	GTMKAC	2 cut(s)	598, 1135
Fnu4HI	GCNGC	7 cut(s)	86, 336, 339, 669, 1923, 2108, 2194
FokI	GGATG	6 cut(s)	918, 1111, 1460, 1556, 1565, 1624
FriOI	GRGCYC	1 cut(s)	1086
Fsp4HI	GCNGC	7 cut(s)	86, 336, 339, 669, 1923, 2108, 2194
FspBI	CTAG	7 cut(s)	308, 540, 1418, 1620, 2111, 2139, 2212
GlaI	GCGC	1 cut(s)	2106
GluI	GCNGC	7 cut(s)	86, 336, 339, 669, 1923, 2108, 2194
GsuI	CTGGAG	2 cut(s)	1299, 1671
HaeIII	GGCC	8 cut(s)	752, 911, 1039, 1183, 1505, 1803, 1856, 1960
HapII	CCGG	2 cut(s)	15, 298
HhaI	GCGC	1 cut(s)	2107
Hin1I	GRCGYC	1 cut(s)	1634
Hin1II	CATG	9 cut(s)	146, 874, 1003, 1076, 1081, 1195, 1307, 1702, 1706
Hin6I	GCGC	1 cut(s)	2105
HinP1I	GCGC	1 cut(s)	2105
HincII	GTYRAC	2 cut(s)	12, 599
HindII	GTYRAC	2 cut(s)	12, 599
HindIII	AAGCTT	5 cut(s)	269, 302, 1952, 1982, 2203
HpaII	CCGG	2 cut(s)	15, 298
HphI	GGTGA	8 cut(s)	70, 134, 359, 746, 979, 1061, 1828, 2159
Hpy166II	GTNNAC	3 cut(s)	12, 599, 1136
Hpy8I	GTNNAC	3 cut(s)	12, 599, 1136
Hpy99I	CGWCG	2 cut(s)	1373, 1636
HpyAV	CCTTC	7 cut(s)	14, 230, 716, 1097, 1438, 1583, 2085
HpyCH4III	ACNGT	5 cut(s)	46, 407, 1140, 1787, 1863
HpyCH4IV	ACGT	4 cut(s)	92, 1634, 1659, 1851
HpyF10VI	GCNNNNNNNGC	4 cut(s)	395, 1036, 1625, 2202
HpyF3I	CTNAG	6 cut(s)	174, 754, 882, 1185, 1603, 1950
HpySE526I	ACGT	4 cut(s)	92, 1634, 1659, 1851
Hsp92I	GRCGYC	1 cut(s)	1634
Hsp92II	CATG	9 cut(s)	146, 874, 1003, 1076, 1081, 1195, 1307, 1702, 1706
HspAI	GCGC	1 cut(s)	2105
Kpn2I	TCCGGA	1 cut(s)	297
Ksp22I	TGATCA	3 cut(s)	514, 552, 955
Kzo9I	GATC	8 cut(s)	262, 514, 552, 955, 982, 1867, 1897, 1965
LmnI	GCTCC	6 cut(s)	82, 115, 1019, 1081, 1690, 2190
Lsp1109I	GCAGC	5 cut(s)	72, 325, 680, 1909, 2094
LweI	GCATC	4 cut(s)	568, 1637, 2045, 2166
MabI	ACCWGGT	1 cut(s)	823
MaeI	CTAG	7 cut(s)	308, 540, 1418, 1620, 2111, 2139, 2212
MaeII	ACGT	4 cut(s)	92, 1634, 1659, 1851
MaeIII	GTNAC	7 cut(s)	122, 546, 831, 842, 1676, 1883, 2005
MalI	GATC	8 cut(s)	264, 516, 554, 957, 984, 1869, 1899, 1967
MbiI	CCGCTC	1 cut(s)	2196
MboI	GATC	8 cut(s)	262, 514, 552, 955, 982, 1867, 1897, 1965
MfeI	CAATTG	2 cut(s)	345, 1023
MflI	RGATCY	1 cut(s)	1867
MhlI	GDGCHC	3 cut(s)	100, 225, 1086
MlyI	GAGTC	3 cut(s)	694, 725, 765
MmeI	TCCRAC	5 cut(s)	331, 699, 1197, 1445, 1590
Mph1103I	ATGCAT	4 cut(s)	872, 1459, 1704, 1738
MroI	TCCGGA	1 cut(s)	297
MroXI	GAANNNNTTC	1 cut(s)	2070
MseI	TTAA	8 cut(s)	105, 251, 273, 588, 707, 1328, 2097, 2208
MslI	CAYNNNNRTG	1 cut(s)	1551
MspA1I	CMGCKG	2 cut(s)	671, 941
MspCI	CTTAAG	1 cut(s)	272
MspI	CCGG	2 cut(s)	15, 298
MspR9I	CCNGG	6 cut(s)	120, 825, 975, 1805, 1877, 1895
MunI	CAATTG	2 cut(s)	345, 1023
Mva1269I	GAATGC	2 cut(s)	565, 1459
MvaI	CCWGG	6 cut(s)	120, 825, 975, 1805, 1877, 1895
MwoI	GCNNNNNNNGC	4 cut(s)	395, 1036, 1625, 2202
NcoI	CCATGG	1 cut(s)	1072
NdeII	GATC	8 cut(s)	262, 514, 552, 955, 982, 1867, 1897, 1965
NlaIII	CATG	9 cut(s)	146, 874, 1003, 1076, 1081, 1195, 1307, 1702, 1706
NlaIV	GGNNCC	6 cut(s)	117, 691, 1083, 1232, 1686, 2192
NmuCI	GTSAC	5 cut(s)	122, 546, 831, 842, 1883
NsiI	ATGCAT	4 cut(s)	872, 1459, 1704, 1738
PagI	TCATGA	1 cut(s)	1303
PceI	AGGCCT	1 cut(s)	1183
PctI	GAATGC	2 cut(s)	565, 1459
PdmI	GAANNNNTTC	1 cut(s)	2070
PfeI	GAWTC	9 cut(s)	68, 215, 375, 674, 799, 806, 970, 1359, 2126
PflFI	GACNNNGTC	2 cut(s)	128, 184
PflMI	CCANNNNNTGG	1 cut(s)	1078
PfoI	TCCNGGA	1 cut(s)	973
PkrI	GCNGC	7 cut(s)	87, 337, 340, 670, 1924, 2109, 2195
PleI	GAGTC	3 cut(s)	694, 724, 765
PpsI	GAGTC	3 cut(s)	694, 724, 765
PshBI	ATTAAT	1 cut(s)	707
Psp6I	CCWGG	6 cut(s)	118, 823, 973, 1803, 1875, 1893
PspGI	CCWGG	6 cut(s)	118, 823, 973, 1803, 1875, 1893
PspN4I	GGNNCC	6 cut(s)	117, 691, 1083, 1232, 1686, 2192
PspPI	GGNCC	7 cut(s)	154, 479, 909, 1037, 1504, 1801, 1855
PsuI	RGATCY	1 cut(s)	1867
PsyI	GACNNNGTC	2 cut(s)	128, 184
PvuII	CAGCTG	1 cut(s)	941
RsaI	GTAC	4 cut(s)	312, 404, 570, 759
RsaNI	GTAC	4 cut(s)	311, 403, 569, 758
RseI	CAYNNNNRTG	1 cut(s)	1551
SalI	GTCGAC	1 cut(s)	597
SaqAI	TTAA	8 cut(s)	105, 251, 273, 588, 707, 1328, 2097, 2208
SatI	GCNGC	7 cut(s)	86, 336, 339, 669, 1923, 2108, 2194
Sau3AI	GATC	8 cut(s)	262, 514, 552, 955, 982, 1867, 1897, 1965
Sau96I	GGNCC	7 cut(s)	154, 479, 909, 1037, 1504, 1801, 1855
ScaI	AGTACT	1 cut(s)	404
SchI	GAGTC	3 cut(s)	694, 725, 765
ScrFI	CCNGG	6 cut(s)	120, 825, 975, 1805, 1877, 1895
SduI	GDGCHC	3 cut(s)	100, 225, 1086
SexAI	ACCWGGT	1 cut(s)	823
SfaNI	GCATC	4 cut(s)	568, 1637, 2045, 2166
SfcI	CTRYAG	2 cut(s)	280, 1783
SinI	GGWCC	2 cut(s)	154, 479
SmiMI	CAYNNNNRTG	1 cut(s)	1551
SmlI	CTYRAG	4 cut(s)	149, 272, 913, 1754
SmoI	CTYRAG	4 cut(s)	149, 272, 913, 1754
SpeI	ACTAGT	1 cut(s)	539
SseBI	AGGCCT	1 cut(s)	1183
SsiI	CCGC	5 cut(s)	24, 113, 335, 671, 2194
SspI	AATATT	2 cut(s)	1121, 1836
SspMI	CTAG	7 cut(s)	308, 540, 1418, 1620, 2111, 2139, 2212
StuI	AGGCCT	1 cut(s)	1183
StyD4I	CCNGG	6 cut(s)	118, 823, 973, 1803, 1875, 1893
StyI	CCWWGG	2 cut(s)	1072, 1990
TaaI	ACNGT	5 cut(s)	46, 407, 1140, 1787, 1863
TaiI	ACGT	4 cut(s)	95, 1637, 1662, 1854
TaqI	TCGA	6 cut(s)	213, 598, 774, 1368, 1509, 1631
TatI	WGTACW	2 cut(s)	310, 402
TauI	GCSGC	2 cut(s)	338, 2196
TfiI	GAWTC	9 cut(s)	68, 215, 375, 674, 799, 806, 970, 1359, 2126
Tru1I	TTAA	8 cut(s)	105, 251, 273, 588, 707, 1328, 2097, 2208
Tru9I	TTAA	8 cut(s)	105, 251, 273, 588, 707, 1328, 2097, 2208
TscAI	CASTG	5 cut(s)	555, 753, 818, 1263, 2149
TseFI	GTSAC	5 cut(s)	122, 546, 831, 842, 1883
TseI	GCWGC	5 cut(s)	85, 338, 668, 1922, 2107
Tsp45I	GTSAC	5 cut(s)	122, 546, 831, 842, 1883
TspDTI	ATGAA	8 cut(s)	17, 131, 249, 771, 1113, 1292, 1320, 1687
TspGWI	ACGGA	2 cut(s)	492, 2076
TspRI	CASTG	5 cut(s)	555, 753, 818, 1263, 2149
Tth111I	GACNNNGTC	2 cut(s)	128, 184
Van91I	CCANNNNNTGG	1 cut(s)	1078
Vha464I	CTTAAG	1 cut(s)	272
VpaK11BI	GGWCC	2 cut(s)	154, 479
VspI	ATTAAT	1 cut(s)	707
XapI	RAATTY	3 cut(s)	501, 742, 1097
XmiI	GTMKAC	2 cut(s)	598, 1135
XmnI	GAANNNNTTC	1 cut(s)	2070
XspI	CTAG	7 cut(s)	308, 540, 1418, 1620, 2111, 2139, 2212
ZraI	GACGTC	1 cut(s)	1635
ZrmI	AGTACT	1 cut(s)	404
Zsp2I	ATGCAT	4 cut(s)	872, 1459, 1704, 1738

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.