Rmu_sc0003133.1_g000014

Universal stress protein family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003133.1
Physical Location & Seq
Reverse (-)
69359 .. 71985
2627 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003133.1_g000014.1.cds

Sequence Viewer

Length: 1782 bp
atgaccggagaggcaggcaagacggtggtcgtcggtgtcaagctcgactcgcacagcaaggagttgctgacgtgggccctcgtcaaagtggccgggcctggtgaccatgtcattgccattcatgtcctcgactccatctcagaggagacttcgtgtttgctctcgatggtcaagacattcgattctgtgctctctgcttatgaaggtttctgtagcttgaagcagattgatctgaagctaaaggtgtgtagaggaaattcgatcagaaaagttttagtaagggaagcaaaggcatttcatgctgatactctaattgttgggacttccaaaactcaccatagaattcgatcatccgtgtctgttaccaagtactgtgcctggaaattgcccaaaagtttctctgttttcgctgtcgataatggcaaggttgtgttcaagagggaagaggctgataactgtgcacatcaatcacaagataataatcataagtcatctccgaagaacgtagaggttcttgaagatgttaaactaaataaatgcaagaagaaaagccgtaagacaaaatgccagaactgtgaaggggattcagttttattggataattctgggacccaattgacagctgagttgcctggcgatggaaatgaggacaattcattggctttggttccattccaaaggatgaactctatcaagactcaaaatccgcactgttttaaacccggttggtccattcttcactggacatttttaagaagacagcaacacaagaagaaatctgatgaaaagacatctgttttgggacgggtgtcgaaaccattgagttcccatacttcggctgttgtttatcctgatcagaaacacagtaattctagccaggatggagatcattcttccgtgcctgatggagcaagtagtacaactgtgtcacttggctctaatgaaatcttccctcctctaacccctaaccatggcatggagagccttcctgaagaatttttagatttatgtaagaaatattcatccagctgtagactgtttagctacgaggaacttttgttggcaacatcaaacttcttacctgagaacatggttggaaaaggtggcagtagtcatgtttatagaggccatcttttagacgggaaggagttggcagtgaaaatcctgaagccatctgcagatatattgaaagagtttgttcatgaagttgagatcatcacagctttaaatcacaagaacataatctctctttatggattatgtttcgacaacaatttagttttggtgtatgattttatctcaagaggaagcttagaagacaacctccatggtaataagaaagatgggaattcattcggttggaaggatagatataatgtggccttaggtgtagcggaggcactcaactatctacacaatggctgtgaagaacctgtgatccataaggatgtaaagtcttccaacatccttctttcagatgattttgagccacagctctcagattttggacttgcgagcttggcatcgacgtcaacgcatattgattgcacggatgttgctggaacatttggttacttggctccagaatacttcatgcatggcaaggttagtgataaaattgatgtctatgcctttggtgtggtactccttgagcttctttctggtagacaaccaatctacagcaaatgtgcaaaggaccaggaaagtctggtgatgtgggcaaagccaatactgaagcgtgggggaggttgcccaactgctagatccaagcctgggaagtga

Protein Analysis

593

Amino Acids

65.31

Weight (kDa)

8.04

Isoelectric Point (pI)

34.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1532
AccB7I CCANNNNNTGG 1 cut(s) 976
AccI GTMKAC 2 cut(s) 1033, 1666
AciI CCGC 2 cut(s) 707, 1394
AclWI GGATC 2 cut(s) 1432, 1758
AcoI YGGCCR 1 cut(s) 90
AcsI RAATTY 4 cut(s) 256, 342, 995, 1348
AcuI CTGAAG 4 cut(s) 254, 1011, 1187, 1754
AcyI GRCGYC 1 cut(s) 1529
AfaI GTAC 3 cut(s) 371, 919, 1644
AfiI CCNNNNNNNGG 5 cut(s) 638, 835, 971, 976, 1773
AgsI TTSAA 4 cut(s) 220, 436, 518, 1189
AjiI CACGTC 1 cut(s) 72
AjnI CCWGG 6 cut(s) 97, 377, 631, 876, 1698, 1771
AloI GAACNNNNNNTCC 2 cut(s) 1422, 1454
Alw21I GWGCWC 2 cut(s) 192, 463
Alw26I GTCTC 1 cut(s) 140
Alw44I GTGCAC 1 cut(s) 459
AlwI GGATC 2 cut(s) 1432, 1758
AoxI GGCC 5 cut(s) 75, 90, 95, 1126, 1380
ApaI GGGCCC 1 cut(s) 79
ApaLI GTGCAC 1 cut(s) 459
ApoI RAATTY 4 cut(s) 256, 342, 995, 1348
ArsI GACNNNNNNTTYG 4 cut(s) 139, 171, 781, 813
Asp700I GAANNNNTTC 1 cut(s) 1352
AspS9I GGNCC 6 cut(s) 75, 76, 95, 609, 729, 1696
AsuC2I CCSGG 2 cut(s) 94, 723
AsuHPI GGTGA 3 cut(s) 113, 326, 1723
AvaII GGWCC 3 cut(s) 609, 729, 1696
AxyI CCTNAGG 1 cut(s) 1384
BaeGI GKGCMC 2 cut(s) 79, 463
BanII GRGCYC 1 cut(s) 79
BbsI GAAGAC 3 cut(s) 763, 1323, 1449
Bbv12I GWGCWC 2 cut(s) 192, 463
BccI CCATC 8 cut(s) 143, 160, 632, 875, 899, 1137, 1180, 1337
BceAI ACGGC 1 cut(s) 537
BciT130I CCWGG 6 cut(s) 99, 379, 633, 878, 1700, 1773
BclI TGATCA 1 cut(s) 853
BcnI CCSGG 2 cut(s) 94, 723
BcoDI GTCTC 1 cut(s) 140
BfaI CTAG 2 cut(s) 873, 1761
BfmI CTRYAG 4 cut(s) 211, 1030, 1176, 1678
BmcAI AGTACT 1 cut(s) 371
Bme1390I CCNGG 8 cut(s) 94, 99, 379, 633, 723, 878, 1700, 1773
Bme18I GGWCC 3 cut(s) 609, 729, 1696
BmgBI CACGTC 1 cut(s) 72
BmgT120I GGNCC 6 cut(s) 75, 76, 95, 609, 729, 1696
BmiI GGNNCC 5 cut(s) 77, 610, 611, 669, 1581
BmrFI CCNGG 8 cut(s) 94, 99, 379, 633, 723, 878, 1700, 1773
BmsI GCATC 1 cut(s) 1532
BoxI GACNNNNGTC 2 cut(s) 26, 808
BpiI GAAGAC 3 cut(s) 763, 1323, 1449
BpmI CTGGAG 1 cut(s) 1566
BpuEI CTTGAG 2 cut(s) 1285, 1670
BpuMI CCSGG 2 cut(s) 94, 723
BsaBI GATNNNNATC 2 cut(s) 480, 885
BsaHI GRCGYC 1 cut(s) 1529
BsaJI CCNNGG 3 cut(s) 970, 1327, 1772
BsaWI WCCGGW 1 cut(s) 5
BsaXI ACNNNNNCTCC 2 cut(s) 137, 167
Bsc4I CCNNNNNNNGG 5 cut(s) 638, 835, 971, 976, 1773
Bse1I ACTGG 1 cut(s) 746
Bse21I CCTNAGG 1 cut(s) 1384
Bse3DI GCAATG 1 cut(s) 111
Bse8I GATNNNNATC 2 cut(s) 480, 885
BseBI CCWGG 6 cut(s) 99, 379, 633, 878, 1700, 1773
BseDI CCNNGG 3 cut(s) 970, 1327, 1772
BseGI GGATG 7 cut(s) 350, 687, 886, 1022, 1453, 1464, 1558
BseJI GATNNNNATC 2 cut(s) 480, 885
BseLI CCNNNNNNNGG 5 cut(s) 638, 835, 971, 976, 1773
BseMI GCAATG 1 cut(s) 111
BseMII CTCAG 4 cut(s) 153, 615, 1074, 1512
BseNI ACTGG 1 cut(s) 746
BseRI GAGGAG 2 cut(s) 158, 945
BseSI GKGCMC 2 cut(s) 79, 463
BshFI GGCC 5 cut(s) 77, 92, 97, 1128, 1382
BsiHKAI GWGCWC 2 cut(s) 192, 463
BsiSI CCGG 3 cut(s) 6, 93, 723
BslFI GGGAC 3 cut(s) 334, 622, 816
BslI CCNNNNNNNGG 5 cut(s) 638, 835, 971, 976, 1773
BsmAI GTCTC 1 cut(s) 140
BsmFI GGGAC 3 cut(s) 334, 622, 816
BsnI GGCC 5 cut(s) 77, 92, 97, 1128, 1382
Bsp120I GGGCCC 1 cut(s) 75
Bsp1286I GDGCHC 3 cut(s) 79, 192, 463
Bsp143I GATC 8 cut(s) 229, 261, 347, 853, 886, 1212, 1437, 1763
Bsp19I CCATGG 2 cut(s) 970, 1327
BspACI CCGC 2 cut(s) 707, 1394
BspANI GGCC 5 cut(s) 77, 92, 97, 1128, 1382
BspCNI CTCAG 4 cut(s) 152, 616, 1075, 1511
BspHI TCATGA 1 cut(s) 1201
BspLI GGNNCC 5 cut(s) 77, 610, 611, 669, 1581
BspMAI CTGCAG 1 cut(s) 1180
BspPI GGATC 2 cut(s) 1432, 1758
BsrDI GCAATG 1 cut(s) 111
BsrI ACTGG 1 cut(s) 746
BssECI CCNNGG 3 cut(s) 970, 1327, 1772
BssMI GATC 8 cut(s) 229, 261, 347, 853, 886, 1212, 1437, 1763
BssNI GRCGYC 1 cut(s) 1529
BssT1I CCWWGG 2 cut(s) 970, 1327
Bst2UI CCWGG 6 cut(s) 99, 379, 633, 878, 1700, 1773
Bst4CI ACNGT 8 cut(s) 25, 374, 458, 575, 713, 866, 925, 1038
Bst6I CTCTTC 1 cut(s) 438
BstACI GRCGYC 1 cut(s) 1529
BstAPI GCANNNNNTGC 1 cut(s) 299
BstC8I GCNNGC 2 cut(s) 16, 1516
BstDEI CTNAG 6 cut(s) 139, 624, 1083, 1312, 1384, 1498
BstDSI CCRYGG 2 cut(s) 970, 1327
BstEII GGTNACC 1 cut(s) 101
BstF5I GGATG 7 cut(s) 350, 687, 886, 1022, 1453, 1464, 1558
BstKTI GATC 8 cut(s) 232, 264, 350, 856, 889, 1215, 1440, 1766
BstMAI GTCTC 1 cut(s) 140
BstMBI GATC 8 cut(s) 229, 261, 347, 853, 886, 1212, 1437, 1763
BstMWI GCNNNNNNNGC 4 cut(s) 49, 299, 981, 1520
BstNI CCWGG 6 cut(s) 99, 379, 633, 878, 1700, 1773
BstPAI GACNNNNGTC 2 cut(s) 26, 808
BstPI GGTNACC 1 cut(s) 101
BstSCI CCNGG 8 cut(s) 92, 97, 377, 631, 721, 876, 1698, 1771
BstSFI CTRYAG 4 cut(s) 211, 1030, 1176, 1678
BstSLI GKGCMC 2 cut(s) 79, 463
BstV2I GAAGAC 3 cut(s) 763, 1323, 1449
BstX2I RGATCY 1 cut(s) 1763
BstYI RGATCY 1 cut(s) 1763
Bsu36I CCTNAGG 1 cut(s) 1384
BsuRI GGCC 5 cut(s) 77, 92, 97, 1128, 1382
BtgI CCRYGG 2 cut(s) 970, 1327
BtgZI GCGATG 1 cut(s) 651
BtrI CACGTC 1 cut(s) 72
BtsCI GGATG 7 cut(s) 350, 687, 886, 1022, 1453, 1464, 1558
BtsI GCAGTG 1 cut(s) 1161
BtsIMutI CAGTG 3 cut(s) 709, 739, 1161
Cac8I GCNNGC 2 cut(s) 16, 1516
CciI TCATGA 1 cut(s) 1201
Cfr13I GGNCC 6 cut(s) 75, 76, 95, 609, 729, 1696
Csp6I GTAC 3 cut(s) 370, 918, 1643
CviQI GTAC 3 cut(s) 370, 918, 1643
DdeI CTNAG 6 cut(s) 139, 624, 1083, 1312, 1384, 1498
DpnI GATC 8 cut(s) 231, 263, 349, 855, 888, 1214, 1439, 1765
DpnII GATC 8 cut(s) 229, 261, 347, 853, 886, 1212, 1437, 1763
DraI TTTAAA 2 cut(s) 718, 1227
EaeI YGGCCR 1 cut(s) 90
Eam1104I CTCTTC 1 cut(s) 438
EarI CTCTTC 1 cut(s) 438
Eco130I CCWWGG 2 cut(s) 970, 1327
Eco24I GRGCYC 1 cut(s) 79
Eco47I GGWCC 3 cut(s) 609, 729, 1696
Eco57I CTGAAG 4 cut(s) 254, 1011, 1187, 1754
Eco81I CCTNAGG 1 cut(s) 1384
Eco91I GGTNACC 1 cut(s) 101
EcoO109I RGGNCCY 2 cut(s) 76, 609
EcoO65I GGTNACC 1 cut(s) 101
EcoRI GAATTC 2 cut(s) 342, 1348
EcoRII CCWGG 6 cut(s) 97, 377, 631, 876, 1698, 1771
EcoT14I CCWWGG 2 cut(s) 970, 1327
EcoT22I ATGCAT 1 cut(s) 1599
EcoT38I GRGCYC 1 cut(s) 79
ErhI CCWWGG 2 cut(s) 970, 1327
FaqI GGGAC 3 cut(s) 334, 622, 816
FbaI TGATCA 1 cut(s) 853
FblI GTMKAC 2 cut(s) 1033, 1666
FokI GGATG 7 cut(s) 337, 694, 893, 1009, 1451, 1460, 1565
FriOI GRGCYC 1 cut(s) 79
FspBI CTAG 2 cut(s) 873, 1761
GsuI CTGGAG 1 cut(s) 1566
HaeIII GGCC 5 cut(s) 77, 92, 97, 1128, 1382
HapII CCGG 3 cut(s) 6, 93, 723
Hin1I GRCGYC 1 cut(s) 1529
HincII GTYRAC 1 cut(s) 1533
HindII GTYRAC 1 cut(s) 1533
HindIII AAGCTT 1 cut(s) 1309
HinfI GANTC 5 cut(s) 47, 131, 182, 584, 697
HpaII CCGG 3 cut(s) 6, 93, 723
HphI GGTGA 3 cut(s) 113, 326, 1723
Hpy166II GTNNAC 4 cut(s) 461, 1034, 1533, 1667
Hpy188I TCNGA 8 cut(s) 142, 234, 266, 498, 781, 858, 1477, 1501
Hpy8I GTNNAC 4 cut(s) 461, 1034, 1533, 1667
Hpy99I CGWCG 2 cut(s) 35, 1531
HpyAV CCTTC 6 cut(s) 197, 572, 995, 1138, 1357, 1478
HpyCH4III ACNGT 8 cut(s) 25, 374, 458, 575, 713, 866, 925, 1038
HpyCH4IV ACGT 3 cut(s) 71, 504, 1529
HpyCH4V TGCA 6 cut(s) 461, 540, 1178, 1548, 1597, 1691
HpyF10VI GCNNNNNNNGC 4 cut(s) 49, 299, 981, 1520
HpyF3I CTNAG 6 cut(s) 139, 624, 1083, 1312, 1384, 1498
HpySE526I ACGT 3 cut(s) 71, 504, 1529
Hsp92I GRCGYC 1 cut(s) 1529
KflI GGGWCCC 1 cut(s) 609
Ksp22I TGATCA 1 cut(s) 853
Kzo9I GATC 8 cut(s) 229, 261, 347, 853, 886, 1212, 1437, 1763
LmnI GCTCC 2 cut(s) 908, 1585
LweI GCATC 1 cut(s) 1532
MaeI CTAG 2 cut(s) 873, 1761
MaeII ACGT 3 cut(s) 71, 504, 1529
MaeIII GTNAC 4 cut(s) 101, 361, 927, 1571
MalI GATC 8 cut(s) 231, 263, 349, 855, 888, 1214, 1439, 1765
MboI GATC 8 cut(s) 229, 261, 347, 853, 886, 1212, 1437, 1763
MfeI CAATTG 1 cut(s) 614
MflI RGATCY 1 cut(s) 1763
MhlI GDGCHC 3 cut(s) 79, 192, 463
MlyI GAGTC 3 cut(s) 41, 125, 691
MmeI TCCRAC 3 cut(s) 1075, 1340, 1485
Mph1103I ATGCAT 1 cut(s) 1599
MroXI GAANNNNTTC 1 cut(s) 1352
MseI TTAA 4 cut(s) 525, 717, 752, 1226
MslI CAYNNNNRTG 1 cut(s) 1446
MspA1I CMGCKG 2 cut(s) 623, 1029
MspI CCGG 3 cut(s) 6, 93, 723
MspR9I CCNGG 8 cut(s) 94, 99, 379, 633, 723, 878, 1700, 1773
MunI CAATTG 1 cut(s) 614
MvaI CCWGG 6 cut(s) 99, 379, 633, 878, 1700, 1773
MwoI GCNNNNNNNGC 4 cut(s) 49, 299, 981, 1520
NciI CCSGG 2 cut(s) 94, 723
NcoI CCATGG 2 cut(s) 970, 1327
NdeII GATC 8 cut(s) 229, 261, 347, 853, 886, 1212, 1437, 1763
NlaIV GGNNCC 5 cut(s) 77, 610, 611, 669, 1581
NmuCI GTSAC 2 cut(s) 101, 927
NsiI ATGCAT 1 cut(s) 1599
PagI TCATGA 1 cut(s) 1201
PdmI GAANNNNTTC 1 cut(s) 1352
PfeI GAWTC 2 cut(s) 182, 584
PflFI GACNNNGTC 1 cut(s) 107
PflMI CCANNNNNTGG 1 cut(s) 976
PleI GAGTC 3 cut(s) 41, 125, 691
PpsI GAGTC 3 cut(s) 41, 125, 691
PpuMI RGGWCCY 1 cut(s) 609
PshAI GACNNNNGTC 2 cut(s) 26, 808
Psp5II RGGWCCY 1 cut(s) 609
Psp6I CCWGG 6 cut(s) 97, 377, 631, 876, 1698, 1771
PspEI GGTNACC 1 cut(s) 101
PspGI CCWGG 6 cut(s) 97, 377, 631, 876, 1698, 1771
PspN4I GGNNCC 5 cut(s) 77, 610, 611, 669, 1581
PspOMI GGGCCC 1 cut(s) 75
PspPI GGNCC 6 cut(s) 75, 76, 95, 609, 729, 1696
PspPPI RGGWCCY 1 cut(s) 609
PstI CTGCAG 1 cut(s) 1180
PsuI RGATCY 1 cut(s) 1763
PsyI GACNNNGTC 1 cut(s) 107
PvuII CAGCTG 2 cut(s) 623, 1029
RsaI GTAC 3 cut(s) 371, 919, 1644
RsaNI GTAC 3 cut(s) 370, 918, 1643
RseI CAYNNNNRTG 1 cut(s) 1446
SaqAI TTAA 4 cut(s) 525, 717, 752, 1226
Sau3AI GATC 8 cut(s) 229, 261, 347, 853, 886, 1212, 1437, 1763
Sau96I GGNCC 6 cut(s) 75, 76, 95, 609, 729, 1696
ScaI AGTACT 1 cut(s) 371
SchI GAGTC 3 cut(s) 41, 125, 691
ScrFI CCNGG 8 cut(s) 94, 99, 379, 633, 723, 878, 1700, 1773
SduI GDGCHC 3 cut(s) 79, 192, 463
SfaNI GCATC 1 cut(s) 1532
SfcI CTRYAG 4 cut(s) 211, 1030, 1176, 1678
SinI GGWCC 3 cut(s) 609, 729, 1696
SmiMI CAYNNNNRTG 1 cut(s) 1446
SmlI CTYRAG 2 cut(s) 1300, 1649
SmoI CTYRAG 2 cut(s) 1300, 1649
SsiI CCGC 2 cut(s) 707, 1394
SspI AATATT 1 cut(s) 1019
SspMI CTAG 2 cut(s) 873, 1761
StyD4I CCNGG 8 cut(s) 92, 97, 377, 631, 721, 876, 1698, 1771
StyI CCWWGG 2 cut(s) 970, 1327
TaaI ACNGT 8 cut(s) 25, 374, 458, 575, 713, 866, 925, 1038
TaiI ACGT 3 cut(s) 74, 507, 1532
TatI WGTACW 2 cut(s) 369, 917
TfiI GAWTC 2 cut(s) 182, 584
Tru1I TTAA 4 cut(s) 525, 717, 752, 1226
Tru9I TTAA 4 cut(s) 525, 717, 752, 1226
TscAI CASTG 3 cut(s) 716, 746, 1161
TseFI GTSAC 2 cut(s) 101, 927
Tsp45I GTSAC 2 cut(s) 101, 927
TspGWI ACGGA 3 cut(s) 343, 886, 1565
TspRI CASTG 3 cut(s) 716, 746, 1161
Tth111I GACNNNGTC 1 cut(s) 107
Van91I CCANNNNNTGG 1 cut(s) 976
VneI GTGCAC 1 cut(s) 459
VpaK11BI GGWCC 3 cut(s) 609, 729, 1696
XapI RAATTY 4 cut(s) 256, 342, 995, 1348
XmiI GTMKAC 2 cut(s) 1033, 1666
XmnI GAANNNNTTC 1 cut(s) 1352
XspI CTAG 2 cut(s) 873, 1761
ZraI GACGTC 1 cut(s) 1530
ZrmI AGTACT 1 cut(s) 371
Zsp2I ATGCAT 1 cut(s) 1599
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.