Universal stress protein family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G63940 |
| fragaria_vesca | FvH4_1g24700 FvH4_1g24700 FvH4_1g24700 FvH4_1g24700 FvH4_1g24700 |
| malus_domestica | MD15G1134800.v1.1 |
| prunus_persica | Prupe.4G275600_v2.0.a1 |
| pyrus_communis | pycom15g12160 |
| rosa_chinensis | RchiOBHm_Chr2g0122201 |
| rosa_laevigata | RLG00000018670 |
| rosa_multiflora | Rmu_co8318615.1_g000001 Rmu_sc0003133.1_g000014 Rmu_sc0013150.1_g000002 Rmu_sc0025362.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00121770 |
| rosa_rugosa | Rorug02G0237200 Rorug05G0310500 |
| rosa_samantha | Rh2AG295700 Rh2BG304700 Rh2CG283100 Rh2DG319700 |
| rosa_wichuraiana | Rw2G023550 Rw2G023780 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 1532 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 976 |
| AccI | GTMKAC | 2 cut(s) | 1033, 1666 |
| AciI | CCGC | 1 cut(s) | 1394 |
| AclWI | GGATC | 3 cut(s) | 1432, 1757, 1868 |
| AcoI | YGGCCR | 1 cut(s) | 90 |
| AcsI | RAATTY | 3 cut(s) | 342, 995, 1348 |
| AcuI | CTGAAG | 5 cut(s) | 254, 1011, 1187, 1754, 1895 |
| AcyI | GRCGYC | 1 cut(s) | 1529 |
| AfaI | GTAC | 3 cut(s) | 371, 919, 1644 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 619, 638, 835, 971, 976, 1772 |
| AgsI | TTSAA | 5 cut(s) | 220, 436, 518, 1189, 1886 |
| AjiI | CACGTC | 1 cut(s) | 72 |
| AjnI | CCWGG | 7 cut(s) | 97, 377, 631, 876, 1698, 1770, 1843 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 641, 673 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 1422, 1454, 1950, 1982 |
| Alw21I | GWGCWC | 2 cut(s) | 192, 463 |
| Alw26I | GTCTC | 1 cut(s) | 140 |
| Alw44I | GTGCAC | 1 cut(s) | 459 |
| AlwI | GGATC | 3 cut(s) | 1432, 1757, 1868 |
| Ama87I | CYCGRG | 1 cut(s) | 1856 |
| AoxI | GGCC | 4 cut(s) | 90, 1126, 1380, 1853 |
| ApaLI | GTGCAC | 1 cut(s) | 459 |
| ApeKI | GCWGC | 2 cut(s) | 64, 1817 |
| ApoI | RAATTY | 3 cut(s) | 342, 995, 1348 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 139, 171, 781, 813 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1352, 1965 |
| AspS9I | GGNCC | 4 cut(s) | 609, 729, 1696, 1854 |
| AsuC2I | CCSGG | 3 cut(s) | 723, 1857, 1858 |
| AsuHPI | GGTGA | 4 cut(s) | 113, 1723, 1901, 2054 |
| AvaI | CYCGRG | 1 cut(s) | 1856 |
| AvaII | GGWCC | 3 cut(s) | 609, 729, 1696 |
| AxyI | CCTNAGG | 1 cut(s) | 1384 |
| BaeGI | GKGCMC | 2 cut(s) | 79, 463 |
| BbsI | GAAGAC | 3 cut(s) | 763, 1323, 1449 |
| Bbv12I | GWGCWC | 2 cut(s) | 192, 463 |
| BbvI | GCAGC | 2 cut(s) | 51, 1804 |
| BceAI | ACGGC | 2 cut(s) | 436, 636 |
| BciT130I | CCWGG | 7 cut(s) | 99, 379, 633, 878, 1700, 1772, 1845 |
| BclI | TGATCA | 2 cut(s) | 853, 1786 |
| BcnI | CCSGG | 3 cut(s) | 723, 1857, 1858 |
| BcoDI | GTCTC | 1 cut(s) | 140 |
| BfaI | CTAG | 6 cut(s) | 44, 275, 873, 1760, 2006, 2107 |
| BfmI | CTRYAG | 3 cut(s) | 211, 1030, 1176 |
| BisI | GCNGC | 2 cut(s) | 65, 1818 |
| BlsI | GCNGC | 2 cut(s) | 66, 1819 |
| BmcAI | AGTACT | 1 cut(s) | 371 |
| Bme18I | GGWCC | 3 cut(s) | 609, 729, 1696 |
| BmeT110I | CYCGRG | 1 cut(s) | 1856 |
| BmgBI | CACGTC | 1 cut(s) | 72 |
| BmgT120I | GGNCC | 4 cut(s) | 609, 729, 1696, 1854 |
| BmiI | GGNNCC | 4 cut(s) | 610, 611, 669, 1581 |
| BmsI | GCATC | 3 cut(s) | 1532, 1940, 2061 |
| BoxI | GACNNNNGTC | 2 cut(s) | 26, 808 |
| BpiI | GAAGAC | 3 cut(s) | 763, 1323, 1449 |
| BpmI | CTGGAG | 1 cut(s) | 1566 |
| BpuEI | CTTGAG | 2 cut(s) | 1285, 1670 |
| BpuMI | CCSGG | 3 cut(s) | 723, 1857, 1858 |
| BsaBI | GATNNNNATC | 2 cut(s) | 480, 885 |
| BsaHI | GRCGYC | 1 cut(s) | 1529 |
| BsaJI | CCNNGG | 4 cut(s) | 288, 970, 1771, 1856 |
| BsaWI | WCCGGW | 1 cut(s) | 5 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1950, 1980 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 619, 638, 835, 971, 976, 1772 |
| Bse1I | ACTGG | 1 cut(s) | 1956 |
| Bse21I | CCTNAGG | 1 cut(s) | 1384 |
| Bse3DI | GCAATG | 1 cut(s) | 111 |
| Bse8I | GATNNNNATC | 2 cut(s) | 480, 885 |
| BseBI | CCWGG | 7 cut(s) | 99, 379, 633, 878, 1700, 1772, 1845 |
| BseDI | CCNNGG | 4 cut(s) | 288, 970, 1771, 1856 |
| BseGI | GGATG | 8 cut(s) | 350, 687, 886, 1022, 1453, 1464, 1558, 1960 |
| BseJI | GATNNNNATC | 2 cut(s) | 480, 885 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 619, 638, 835, 971, 976, 1772 |
| BseMI | GCAATG | 1 cut(s) | 111 |
| BseMII | CTCAG | 5 cut(s) | 132, 615, 1074, 1512, 2070 |
| BseNI | ACTGG | 1 cut(s) | 1956 |
| BseRI | GAGGAG | 2 cut(s) | 158, 945 |
| BseSI | GKGCMC | 2 cut(s) | 79, 463 |
| BseXI | GCAGC | 2 cut(s) | 51, 1804 |
| BshFI | GGCC | 4 cut(s) | 92, 1128, 1382, 1855 |
| BsiHKAI | GWGCWC | 2 cut(s) | 192, 463 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1856 |
| BsiSI | CCGG | 3 cut(s) | 6, 723, 1857 |
| BslFI | GGGAC | 3 cut(s) | 334, 622, 816 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 619, 638, 835, 971, 976, 1772 |
| BsmAI | GTCTC | 1 cut(s) | 140 |
| BsmFI | GGGAC | 3 cut(s) | 334, 622, 816 |
| BsnI | GGCC | 4 cut(s) | 92, 1128, 1382, 1855 |
| BsoBI | CYCGRG | 1 cut(s) | 1856 |
| Bsp1286I | GDGCHC | 3 cut(s) | 79, 192, 463 |
| Bsp19I | CCATGG | 1 cut(s) | 970 |
| BspACI | CCGC | 1 cut(s) | 1394 |
| BspANI | GGCC | 4 cut(s) | 92, 1128, 1382, 1855 |
| BspCNI | CTCAG | 5 cut(s) | 133, 616, 1075, 1511, 2069 |
| BspHI | TCATGA | 2 cut(s) | 1201, 1789 |
| BspLI | GGNNCC | 4 cut(s) | 610, 611, 669, 1581 |
| BspMAI | CTGCAG | 1 cut(s) | 1180 |
| BspPI | GGATC | 3 cut(s) | 1432, 1757, 1868 |
| BsrDI | GCAATG | 1 cut(s) | 111 |
| BsrI | ACTGG | 1 cut(s) | 1956 |
| BssECI | CCNNGG | 4 cut(s) | 288, 970, 1771, 1856 |
| BssNI | GRCGYC | 1 cut(s) | 1529 |
| BssT1I | CCWWGG | 2 cut(s) | 288, 970 |
| Bst2UI | CCWGG | 7 cut(s) | 99, 379, 633, 878, 1700, 1772, 1845 |
| Bst4CI | ACNGT | 7 cut(s) | 25, 374, 575, 713, 866, 925, 1038 |
| Bst6I | CTCTTC | 1 cut(s) | 438 |
| BstACI | GRCGYC | 1 cut(s) | 1529 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 299 |
| BstC8I | GCNNGC | 1 cut(s) | 16 |
| BstDEI | CTNAG | 8 cut(s) | 141, 624, 1083, 1312, 1384, 1498, 1832, 2056 |
| BstDSI | CCRYGG | 1 cut(s) | 970 |
| BstEII | GGTNACC | 1 cut(s) | 101 |
| BstF5I | GGATG | 8 cut(s) | 350, 687, 886, 1022, 1453, 1464, 1558, 1960 |
| BstMAI | GTCTC | 1 cut(s) | 140 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 49, 299, 981, 1520, 2097 |
| BstNI | CCWGG | 7 cut(s) | 99, 379, 633, 878, 1700, 1772, 1845 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 26, 808 |
| BstPI | GGTNACC | 1 cut(s) | 101 |
| BstSFI | CTRYAG | 3 cut(s) | 211, 1030, 1176 |
| BstSLI | GKGCMC | 2 cut(s) | 79, 463 |
| BstV1I | GCAGC | 2 cut(s) | 51, 1804 |
| BstV2I | GAAGAC | 3 cut(s) | 763, 1323, 1449 |
| BstX2I | RGATCY | 1 cut(s) | 1762 |
| BstYI | RGATCY | 1 cut(s) | 1762 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1384 |
| BsuRI | GGCC | 4 cut(s) | 92, 1128, 1382, 1855 |
| BtgI | CCRYGG | 1 cut(s) | 970 |
| BtgZI | GCGATG | 1 cut(s) | 651 |
| BtrI | CACGTC | 1 cut(s) | 72 |
| BtsCI | GGATG | 8 cut(s) | 350, 687, 886, 1022, 1453, 1464, 1558, 1960 |
| BtsI | GCAGTG | 1 cut(s) | 1161 |
| BtsIMutI | CAGTG | 4 cut(s) | 709, 1161, 1933, 1949 |
| Cac8I | GCNNGC | 1 cut(s) | 16 |
| CciI | TCATGA | 2 cut(s) | 1201, 1789 |
| Cfr13I | GGNCC | 4 cut(s) | 609, 729, 1696, 1854 |
| Cfr9I | CCCGGG | 1 cut(s) | 1856 |
| CseI | GACGC | 1 cut(s) | 1955 |
| Csp6I | GTAC | 3 cut(s) | 370, 918, 1643 |
| CviQI | GTAC | 3 cut(s) | 370, 918, 1643 |
| DdeI | CTNAG | 8 cut(s) | 141, 624, 1083, 1312, 1384, 1498, 1832, 2056 |
| DraI | TTTAAA | 2 cut(s) | 718, 1227 |
| EaeI | YGGCCR | 1 cut(s) | 90 |
| Eam1104I | CTCTTC | 1 cut(s) | 438 |
| EarI | CTCTTC | 1 cut(s) | 438 |
| Eco130I | CCWWGG | 2 cut(s) | 288, 970 |
| Eco47I | GGWCC | 3 cut(s) | 609, 729, 1696 |
| Eco57I | CTGAAG | 5 cut(s) | 254, 1011, 1187, 1754, 1895 |
| Eco81I | CCTNAGG | 1 cut(s) | 1384 |
| Eco88I | CYCGRG | 1 cut(s) | 1856 |
| Eco91I | GGTNACC | 1 cut(s) | 101 |
| EcoO109I | RGGNCCY | 1 cut(s) | 609 |
| EcoO65I | GGTNACC | 1 cut(s) | 101 |
| EcoRI | GAATTC | 2 cut(s) | 342, 1348 |
| EcoRII | CCWGG | 7 cut(s) | 97, 377, 631, 876, 1698, 1770, 1843 |
| EcoT14I | CCWWGG | 2 cut(s) | 288, 970 |
| EcoT22I | ATGCAT | 1 cut(s) | 1599 |
| ErhI | CCWWGG | 2 cut(s) | 288, 970 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1308, 1340 |
| FaqI | GGGAC | 3 cut(s) | 334, 622, 816 |
| FbaI | TGATCA | 2 cut(s) | 853, 1786 |
| FblI | GTMKAC | 2 cut(s) | 1033, 1666 |
| Fnu4HI | GCNGC | 2 cut(s) | 65, 1818 |
| FokI | GGATG | 8 cut(s) | 337, 694, 893, 1009, 1451, 1460, 1565, 1967 |
| Fsp4HI | GCNGC | 2 cut(s) | 65, 1818 |
| FspBI | CTAG | 6 cut(s) | 44, 275, 873, 1760, 2006, 2107 |
| GluI | GCNGC | 2 cut(s) | 65, 1818 |
| GsuI | CTGGAG | 1 cut(s) | 1566 |
| HaeIII | GGCC | 4 cut(s) | 92, 1128, 1382, 1855 |
| HapII | CCGG | 3 cut(s) | 6, 723, 1857 |
| HgaI | GACGC | 1 cut(s) | 1955 |
| Hin1I | GRCGYC | 1 cut(s) | 1529 |
| HincII | GTYRAC | 1 cut(s) | 1533 |
| HindII | GTYRAC | 1 cut(s) | 1533 |
| HindIII | AAGCTT | 3 cut(s) | 1309, 1877, 2098 |
| HinfI | GANTC | 7 cut(s) | 47, 131, 182, 584, 697, 2021, 2086 |
| HpaII | CCGG | 3 cut(s) | 6, 723, 1857 |
| HphI | GGTGA | 4 cut(s) | 113, 1723, 1901, 2054 |
| Hpy166II | GTNNAC | 5 cut(s) | 461, 1034, 1533, 1667, 2045 |
| Hpy8I | GTNNAC | 5 cut(s) | 461, 1034, 1533, 1667, 2045 |
| Hpy99I | CGWCG | 2 cut(s) | 35, 1531 |
| HpyAV | CCTTC | 8 cut(s) | 197, 572, 995, 1138, 1334, 1357, 1478, 1729 |
| HpyCH4III | ACNGT | 7 cut(s) | 25, 374, 575, 713, 866, 925, 1038 |
| HpyCH4IV | ACGT | 2 cut(s) | 71, 1529 |
| HpyCH4V | TGCA | 7 cut(s) | 461, 1178, 1548, 1597, 1691, 1931, 2074 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 49, 299, 981, 1520, 2097 |
| HpyF3I | CTNAG | 8 cut(s) | 141, 624, 1083, 1312, 1384, 1498, 1832, 2056 |
| HpySE526I | ACGT | 2 cut(s) | 71, 1529 |
| Hsp92I | GRCGYC | 1 cut(s) | 1529 |
| KflI | GGGWCCC | 1 cut(s) | 609 |
| Ksp22I | TGATCA | 2 cut(s) | 853, 1786 |
| LmnI | GCTCC | 3 cut(s) | 61, 1585, 1846 |
| Lsp1109I | GCAGC | 2 cut(s) | 51, 1804 |
| LweI | GCATC | 3 cut(s) | 1532, 1940, 2061 |
| MaeI | CTAG | 6 cut(s) | 44, 275, 873, 1760, 2006, 2107 |
| MaeII | ACGT | 2 cut(s) | 71, 1529 |
| MaeIII | GTNAC | 4 cut(s) | 101, 927, 1571, 1778 |
| MflI | RGATCY | 1 cut(s) | 1762 |
| MhlI | GDGCHC | 3 cut(s) | 79, 192, 463 |
| MlyI | GAGTC | 4 cut(s) | 41, 125, 691, 2095 |
| MmeI | TCCRAC | 3 cut(s) | 1075, 1340, 1485 |
| Mph1103I | ATGCAT | 1 cut(s) | 1599 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1352, 1965 |
| MseI | TTAA | 7 cut(s) | 525, 555, 617, 717, 752, 1226, 1992 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1446 |
| MspA1I | CMGCKG | 1 cut(s) | 1029 |
| MspI | CCGG | 3 cut(s) | 6, 723, 1857 |
| MvaI | CCWGG | 7 cut(s) | 99, 379, 633, 878, 1700, 1772, 1845 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 49, 299, 981, 1520, 2097 |
| NciI | CCSGG | 3 cut(s) | 723, 1857, 1858 |
| NcoI | CCATGG | 1 cut(s) | 970 |
| NlaIV | GGNNCC | 4 cut(s) | 610, 611, 669, 1581 |
| NmeAIII | GCCGAG | 1 cut(s) | 118 |
| NmuCI | GTSAC | 3 cut(s) | 101, 927, 1778 |
| NsiI | ATGCAT | 1 cut(s) | 1599 |
| PagI | TCATGA | 2 cut(s) | 1201, 1789 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1352, 1965 |
| PfeI | GAWTC | 3 cut(s) | 182, 584, 2021 |
| PflFI | GACNNNGTC | 1 cut(s) | 107 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 976 |
| PfoI | TCCNGGA | 1 cut(s) | 1843 |
| PkrI | GCNGC | 2 cut(s) | 66, 1819 |
| PleI | GAGTC | 4 cut(s) | 41, 125, 691, 2094 |
| PpsI | GAGTC | 4 cut(s) | 41, 125, 691, 2094 |
| PpuMI | RGGWCCY | 1 cut(s) | 609 |
| PshAI | GACNNNNGTC | 2 cut(s) | 26, 808 |
| Psp5II | RGGWCCY | 1 cut(s) | 609 |
| Psp6I | CCWGG | 7 cut(s) | 97, 377, 631, 876, 1698, 1770, 1843 |
| PspEI | GGTNACC | 1 cut(s) | 101 |
| PspGI | CCWGG | 7 cut(s) | 97, 377, 631, 876, 1698, 1770, 1843 |
| PspN4I | GGNNCC | 4 cut(s) | 610, 611, 669, 1581 |
| PspPI | GGNCC | 4 cut(s) | 609, 729, 1696, 1854 |
| PspPPI | RGGWCCY | 1 cut(s) | 609 |
| PstI | CTGCAG | 1 cut(s) | 1180 |
| PsuI | RGATCY | 1 cut(s) | 1762 |
| PsyI | GACNNNGTC | 1 cut(s) | 107 |
| PvuII | CAGCTG | 1 cut(s) | 1029 |
| RsaI | GTAC | 3 cut(s) | 371, 919, 1644 |
| RsaNI | GTAC | 3 cut(s) | 370, 918, 1643 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1446 |
| SaqAI | TTAA | 7 cut(s) | 525, 555, 617, 717, 752, 1226, 1992 |
| SatI | GCNGC | 2 cut(s) | 65, 1818 |
| Sau96I | GGNCC | 4 cut(s) | 609, 729, 1696, 1854 |
| ScaI | AGTACT | 1 cut(s) | 371 |
| SchI | GAGTC | 4 cut(s) | 41, 125, 691, 2095 |
| SduI | GDGCHC | 3 cut(s) | 79, 192, 463 |
| SfaNI | GCATC | 3 cut(s) | 1532, 1940, 2061 |
| SfcI | CTRYAG | 3 cut(s) | 211, 1030, 1176 |
| SinI | GGWCC | 3 cut(s) | 609, 729, 1696 |
| SmaI | CCCGGG | 1 cut(s) | 1858 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1446 |
| SmlI | CTYRAG | 2 cut(s) | 1300, 1649 |
| SmoI | CTYRAG | 2 cut(s) | 1300, 1649 |
| SsiI | CCGC | 1 cut(s) | 1394 |
| SspI | AATATT | 1 cut(s) | 1019 |
| SspMI | CTAG | 6 cut(s) | 44, 275, 873, 1760, 2006, 2107 |
| StyI | CCWWGG | 2 cut(s) | 288, 970 |
| TaaI | ACNGT | 7 cut(s) | 25, 374, 575, 713, 866, 925, 1038 |
| TaiI | ACGT | 2 cut(s) | 74, 1532 |
| TaqI | TCGA | 8 cut(s) | 129, 164, 180, 346, 414, 812, 1266, 1526 |
| TatI | WGTACW | 3 cut(s) | 369, 917, 1642 |
| TfiI | GAWTC | 3 cut(s) | 182, 584, 2021 |
| Tru1I | TTAA | 7 cut(s) | 525, 555, 617, 717, 752, 1226, 1992 |
| Tru9I | TTAA | 7 cut(s) | 525, 555, 617, 717, 752, 1226, 1992 |
| TscAI | CASTG | 4 cut(s) | 716, 1161, 1933, 1956 |
| TseFI | GTSAC | 3 cut(s) | 101, 927, 1778 |
| TseI | GCWGC | 2 cut(s) | 64, 1817 |
| Tsp45I | GTSAC | 3 cut(s) | 101, 927, 1778 |
| TspGWI | ACGGA | 3 cut(s) | 343, 886, 1565 |
| TspMI | CCCGGG | 1 cut(s) | 1856 |
| TspRI | CASTG | 4 cut(s) | 716, 1161, 1933, 1956 |
| Tth111I | GACNNNGTC | 1 cut(s) | 107 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 976 |
| VneI | GTGCAC | 1 cut(s) | 459 |
| VpaK11BI | GGWCC | 3 cut(s) | 609, 729, 1696 |
| XapI | RAATTY | 3 cut(s) | 342, 995, 1348 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1136 |
| XmaI | CCCGGG | 1 cut(s) | 1856 |
| XmiI | GTMKAC | 2 cut(s) | 1033, 1666 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1352, 1965 |
| XspI | CTAG | 6 cut(s) | 44, 275, 873, 1760, 2006, 2107 |
| ZraI | GACGTC | 1 cut(s) | 1530 |
| ZrmI | AGTACT | 1 cut(s) | 371 |
| Zsp2I | ATGCAT | 1 cut(s) | 1599 |