Rmu_sc0025362.1_g000001

Universal stress protein family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0025362.1
Physical Location & Seq
Forward (+)
1 .. 2414
2414 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0025362.1_g000001.1.cds

Sequence Viewer

Length: 1671 bp
agggaagaggctgatagctgtgcacatcaatcacaagataataatcataagtcatctccgaagaacgtagaggttcttgaagatgttaaactaaataaatgcaagaagaaaagccgtaagacaaaatgccagaactgtgaaggggattcagttttattggataattctgggacccaattgacagctgagttgcctggcgatggaaatgaggacaattcattggctttggttccattccaaaggatgaactctatcaagactcaaaatccgcactgttttaaacccggttggtccattcttcactggacatttttaagaagacagcaacacaagaagaaatctgatgaaaagacatctgttttgggacaggtgtcgaaaccattgagttcccatacttcggctgttgtttatcctgatcagaaacacagtaattctagccaggatggagatcattcttccgtgcctgatggagcaagtagtacaactgtgtcacttggctctaatgaaatcttccctcctctaacccctaaccatggcatggagagccttcctgaagaatttttagatttatgtaagaaatattcatccagctgtagactctttagctacgaggaacttttgttggcaacatcaaacttcttacctgagaacatggttggaaaaggtggcagtagtcatgtttatagaggccatcttttagacgggaaggatttggcagtgaaaatcctgaagccatctgcagatatattgaaagagtttgttcatgaagttgagatcatcacagctttaaatcacaagaacataatctctctatatggattatgtttcgacaacaatttagttttggtgtatgattttatctcaagaggaagcttagaagacaaccttcatggtaataagaaagatgggaattcatttggttggaaggatagatataatgtggccttaggtgtagcggaggcactcaactatctacacaatggctgtgaagaacctgtgatccataaggatgtaaagtcttccaacatccttctttcagatgattttgagccacagctctcagattttggacttgcgagcttggcatcgacgtcaacgcatattgattgcacggatgttgctggaacatttggttacttggctccagaatacttcatgcatggcaaagttagtgataaaattgatgtctatgcctttggtgttgtactccttgagcttctttctggtagacaaccaatctacagcaaatgtgcaaaggaccaggaaagtctggtgatgtgggcaaagccaatacttaagggtggggaggttgcccaactgctagatccaagcctgggaagtgactatgatcatgaccaaattgagagaatggttttggctgctaacctttgccttagatatgctcctggacttcggcccgggatcagcattgttctgaagcttcttcaaggtgatgaggaaattacaaggtgggcaaggcaagaagtcagtgcatcagatgaacttgacgcactggatggagaagctgttcctacaaatatcaaatcccatcttaacatggcgttgctagacttggaagatgattccctttctacgagtagtggtgaacaaagcatctcagtagaagattacttgcgaggtagatggagtcgctcaacaagctttgactag

Protein Analysis

556

Amino Acids

61.45

Weight (kDa)

5.32

Isoelectric Point (pI)

45.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1094
AccB7I CCANNNNNTGG 1 cut(s) 538
AccI GTMKAC 2 cut(s) 595, 1228
AciI CCGC 2 cut(s) 269, 956
AclWI GGATC 3 cut(s) 994, 1319, 1430
AcsI RAATTY 2 cut(s) 557, 910
AcuI CTGAAG 3 cut(s) 573, 749, 1457
AcyI GRCGYC 1 cut(s) 1091
AfaI GTAC 2 cut(s) 481, 1206
AfiI CCNNNNNNNGG 5 cut(s) 200, 397, 533, 538, 1334
AflII CTTAAG 1 cut(s) 1295
AgsI TTSAA 3 cut(s) 80, 751, 1448
AjnI CCWGG 5 cut(s) 193, 438, 1260, 1332, 1405
AloI GAACNNNNNNTCC 4 cut(s) 984, 1016, 1512, 1544
Alw21I GWGCWC 1 cut(s) 25
Alw44I GTGCAC 1 cut(s) 21
AlwI GGATC 3 cut(s) 994, 1319, 1430
Ama87I CYCGRG 1 cut(s) 1418
AoxI GGCC 3 cut(s) 688, 942, 1415
ApaLI GTGCAC 1 cut(s) 21
ApeKI GCWGC 1 cut(s) 1379
ApoI RAATTY 2 cut(s) 557, 910
ArsI GACNNNNNNTTYG 2 cut(s) 343, 375
Asp700I GAANNNNTTC 1 cut(s) 1527
AspS9I GGNCC 4 cut(s) 171, 291, 1258, 1416
AsuC2I CCSGG 3 cut(s) 285, 1419, 1420
AsuHPI GGTGA 3 cut(s) 1285, 1463, 1616
AvaI CYCGRG 1 cut(s) 1418
AvaII GGWCC 3 cut(s) 171, 291, 1258
AxyI CCTNAGG 1 cut(s) 946
BaeGI GKGCMC 1 cut(s) 25
BbsI GAAGAC 3 cut(s) 325, 885, 1011
Bbv12I GWGCWC 1 cut(s) 25
BbvI GCAGC 1 cut(s) 1366
BccI CCATC 9 cut(s) 194, 437, 461, 699, 742, 899, 1511, 1557, 1638
BceAI ACGGC 1 cut(s) 99
BciT130I CCWGG 5 cut(s) 195, 440, 1262, 1334, 1407
BclI TGATCA 2 cut(s) 415, 1348
BcnI CCSGG 3 cut(s) 285, 1419, 1420
BfaI CTAG 4 cut(s) 435, 1322, 1568, 1669
BfmI CTRYAG 3 cut(s) 592, 738, 1240
BfrI CTTAAG 1 cut(s) 1295
BisI GCNGC 1 cut(s) 1380
BlsI GCNGC 1 cut(s) 1381
Bme1390I CCNGG 8 cut(s) 195, 285, 440, 1262, 1334, 1407, 1419, 1420
Bme18I GGWCC 3 cut(s) 171, 291, 1258
BmeT110I CYCGRG 1 cut(s) 1418
BmgT120I GGNCC 4 cut(s) 171, 291, 1258, 1416
BmiI GGNNCC 4 cut(s) 172, 173, 231, 1143
BmrFI CCNGG 8 cut(s) 195, 285, 440, 1262, 1334, 1407, 1419, 1420
BmsI GCATC 3 cut(s) 1094, 1502, 1623
BoxI GACNNNNGTC 1 cut(s) 370
BpiI GAAGAC 3 cut(s) 325, 885, 1011
BpmI CTGGAG 1 cut(s) 1128
BpuEI CTTGAG 2 cut(s) 847, 1232
BpuMI CCSGG 3 cut(s) 285, 1419, 1420
BsaBI GATNNNNATC 2 cut(s) 42, 447
BsaHI GRCGYC 1 cut(s) 1091
BsaJI CCNNGG 3 cut(s) 532, 1333, 1418
BsaXI ACNNNNNCTCC 2 cut(s) 1512, 1542
Bsc4I CCNNNNNNNGG 5 cut(s) 200, 397, 533, 538, 1334
Bse1I ACTGG 2 cut(s) 308, 1518
Bse21I CCTNAGG 1 cut(s) 946
Bse8I GATNNNNATC 2 cut(s) 42, 447
BseBI CCWGG 5 cut(s) 195, 440, 1262, 1334, 1407
BseDI CCNNGG 3 cut(s) 532, 1333, 1418
BseGI GGATG 7 cut(s) 249, 448, 584, 1015, 1026, 1120, 1522
BseJI GATNNNNATC 2 cut(s) 42, 447
BseLI CCNNNNNNNGG 5 cut(s) 200, 397, 533, 538, 1334
BseMII CTCAG 4 cut(s) 177, 636, 1074, 1632
BseNI ACTGG 2 cut(s) 308, 1518
BseRI GAGGAG 1 cut(s) 507
BseSI GKGCMC 1 cut(s) 25
BseXI GCAGC 1 cut(s) 1366
BshFI GGCC 3 cut(s) 690, 944, 1417
BsiHKAI GWGCWC 1 cut(s) 25
BsiHKCI CYCGRG 1 cut(s) 1418
BsiSI CCGG 2 cut(s) 285, 1419
BslFI GGGAC 2 cut(s) 184, 378
BslI CCNNNNNNNGG 5 cut(s) 200, 397, 533, 538, 1334
BsmFI GGGAC 2 cut(s) 184, 378
BsnI GGCC 3 cut(s) 690, 944, 1417
BsoBI CYCGRG 1 cut(s) 1418
Bsp1286I GDGCHC 1 cut(s) 25
Bsp143I GATC 7 cut(s) 415, 448, 774, 999, 1324, 1348, 1422
Bsp19I CCATGG 1 cut(s) 532
BspACI CCGC 2 cut(s) 269, 956
BspANI GGCC 3 cut(s) 690, 944, 1417
BspCNI CTCAG 4 cut(s) 178, 637, 1073, 1631
BspHI TCATGA 2 cut(s) 763, 1351
BspLI GGNNCC 4 cut(s) 172, 173, 231, 1143
BspMAI CTGCAG 1 cut(s) 742
BspPI GGATC 3 cut(s) 994, 1319, 1430
BspTI CTTAAG 1 cut(s) 1295
BsrI ACTGG 2 cut(s) 308, 1518
BssECI CCNNGG 3 cut(s) 532, 1333, 1418
BssMI GATC 7 cut(s) 415, 448, 774, 999, 1324, 1348, 1422
BssNI GRCGYC 1 cut(s) 1091
BssT1I CCWWGG 1 cut(s) 532
Bst2UI CCWGG 5 cut(s) 195, 440, 1262, 1334, 1407
Bst4CI ACNGT 4 cut(s) 137, 275, 428, 487
BstACI GRCGYC 1 cut(s) 1091
BstAFI CTTAAG 1 cut(s) 1295
BstC8I GCNNGC 1 cut(s) 1078
BstDEI CTNAG 7 cut(s) 186, 645, 874, 946, 1060, 1394, 1618
BstDSI CCRYGG 1 cut(s) 532
BstF5I GGATG 7 cut(s) 249, 448, 584, 1015, 1026, 1120, 1522
BstKTI GATC 7 cut(s) 418, 451, 777, 1002, 1327, 1351, 1425
BstMBI GATC 7 cut(s) 415, 448, 774, 999, 1324, 1348, 1422
BstMWI GCNNNNNNNGC 3 cut(s) 543, 1082, 1659
BstNI CCWGG 5 cut(s) 195, 440, 1262, 1334, 1407
BstPAI GACNNNNGTC 1 cut(s) 370
BstSCI CCNGG 8 cut(s) 193, 283, 438, 1260, 1332, 1405, 1417, 1418
BstSFI CTRYAG 3 cut(s) 592, 738, 1240
BstSLI GKGCMC 1 cut(s) 25
BstV1I GCAGC 1 cut(s) 1366
BstV2I GAAGAC 3 cut(s) 325, 885, 1011
BstX2I RGATCY 1 cut(s) 1324
BstYI RGATCY 1 cut(s) 1324
Bsu36I CCTNAGG 1 cut(s) 946
BsuRI GGCC 3 cut(s) 690, 944, 1417
BtgI CCRYGG 1 cut(s) 532
BtgZI GCGATG 1 cut(s) 213
BtsCI GGATG 7 cut(s) 249, 448, 584, 1015, 1026, 1120, 1522
BtsI GCAGTG 1 cut(s) 723
BtsIMutI CAGTG 5 cut(s) 271, 301, 723, 1495, 1511
Cac8I GCNNGC 1 cut(s) 1078
CciI TCATGA 2 cut(s) 763, 1351
Cfr13I GGNCC 4 cut(s) 171, 291, 1258, 1416
Cfr9I CCCGGG 1 cut(s) 1418
CseI GACGC 1 cut(s) 1517
Csp6I GTAC 2 cut(s) 480, 1205
CviQI GTAC 2 cut(s) 480, 1205
DdeI CTNAG 7 cut(s) 186, 645, 874, 946, 1060, 1394, 1618
DpnI GATC 7 cut(s) 417, 450, 776, 1001, 1326, 1350, 1424
DpnII GATC 7 cut(s) 415, 448, 774, 999, 1324, 1348, 1422
DraI TTTAAA 2 cut(s) 280, 789
Eco130I CCWWGG 1 cut(s) 532
Eco47I GGWCC 3 cut(s) 171, 291, 1258
Eco57I CTGAAG 3 cut(s) 573, 749, 1457
Eco81I CCTNAGG 1 cut(s) 946
Eco88I CYCGRG 1 cut(s) 1418
EcoO109I RGGNCCY 1 cut(s) 171
EcoRI GAATTC 1 cut(s) 910
EcoRII CCWGG 5 cut(s) 193, 438, 1260, 1332, 1405
EcoT14I CCWWGG 1 cut(s) 532
EcoT22I ATGCAT 1 cut(s) 1161
ErhI CCWWGG 1 cut(s) 532
FalI AAGNNNNNCTT 2 cut(s) 870, 902
FaqI GGGAC 2 cut(s) 184, 378
FbaI TGATCA 2 cut(s) 415, 1348
FblI GTMKAC 2 cut(s) 595, 1228
Fnu4HI GCNGC 1 cut(s) 1380
FokI GGATG 7 cut(s) 256, 455, 571, 1013, 1022, 1127, 1529
Fsp4HI GCNGC 1 cut(s) 1380
FspBI CTAG 4 cut(s) 435, 1322, 1568, 1669
GluI GCNGC 1 cut(s) 1380
GsuI CTGGAG 1 cut(s) 1128
HaeIII GGCC 3 cut(s) 690, 944, 1417
HapII CCGG 2 cut(s) 285, 1419
HgaI GACGC 1 cut(s) 1517
Hin1I GRCGYC 1 cut(s) 1091
HincII GTYRAC 1 cut(s) 1095
HindII GTYRAC 1 cut(s) 1095
HindIII AAGCTT 3 cut(s) 871, 1439, 1660
HinfI GANTC 5 cut(s) 146, 259, 597, 1583, 1648
HpaII CCGG 2 cut(s) 285, 1419
HphI GGTGA 3 cut(s) 1285, 1463, 1616
Hpy166II GTNNAC 5 cut(s) 23, 596, 1095, 1229, 1607
Hpy188I TCNGA 7 cut(s) 60, 343, 420, 1039, 1063, 1437, 1498
Hpy188III TCNNGA 9 cut(s) 77, 256, 413, 551, 727, 764, 864, 1145, 1352
Hpy8I GTNNAC 5 cut(s) 23, 596, 1095, 1229, 1607
Hpy99I CGWCG 1 cut(s) 1093
HpyAV CCTTC 6 cut(s) 134, 557, 700, 896, 919, 1040
HpyCH4III ACNGT 4 cut(s) 137, 275, 428, 487
HpyCH4IV ACGT 2 cut(s) 66, 1091
HpyCH4V TGCA 7 cut(s) 23, 102, 740, 1110, 1159, 1253, 1493
HpyF10VI GCNNNNNNNGC 3 cut(s) 543, 1082, 1659
HpyF3I CTNAG 7 cut(s) 186, 645, 874, 946, 1060, 1394, 1618
HpySE526I ACGT 2 cut(s) 66, 1091
Hsp92I GRCGYC 1 cut(s) 1091
KflI GGGWCCC 1 cut(s) 171
Ksp22I TGATCA 2 cut(s) 415, 1348
Kzo9I GATC 7 cut(s) 415, 448, 774, 999, 1324, 1348, 1422
LmnI GCTCC 3 cut(s) 470, 1147, 1408
Lsp1109I GCAGC 1 cut(s) 1366
LweI GCATC 3 cut(s) 1094, 1502, 1623
MaeI CTAG 4 cut(s) 435, 1322, 1568, 1669
MaeII ACGT 2 cut(s) 66, 1091
MaeIII GTNAC 3 cut(s) 489, 1133, 1340
MalI GATC 7 cut(s) 417, 450, 776, 1001, 1326, 1350, 1424
MboI GATC 7 cut(s) 415, 448, 774, 999, 1324, 1348, 1422
MfeI CAATTG 1 cut(s) 176
MflI RGATCY 1 cut(s) 1324
MhlI GDGCHC 1 cut(s) 25
MlyI GAGTC 3 cut(s) 253, 591, 1657
MmeI TCCRAC 3 cut(s) 637, 902, 1047
Mph1103I ATGCAT 1 cut(s) 1161
MroXI GAANNNNTTC 1 cut(s) 1527
MseI TTAA 6 cut(s) 87, 279, 314, 788, 1296, 1554
MslI CAYNNNNRTG 1 cut(s) 1008
MspA1I CMGCKG 2 cut(s) 185, 591
MspCI CTTAAG 1 cut(s) 1295
MspI CCGG 2 cut(s) 285, 1419
MspR9I CCNGG 8 cut(s) 195, 285, 440, 1262, 1334, 1407, 1419, 1420
MunI CAATTG 1 cut(s) 176
MvaI CCWGG 5 cut(s) 195, 440, 1262, 1334, 1407
MwoI GCNNNNNNNGC 3 cut(s) 543, 1082, 1659
NciI CCSGG 3 cut(s) 285, 1419, 1420
NcoI CCATGG 1 cut(s) 532
NdeII GATC 7 cut(s) 415, 448, 774, 999, 1324, 1348, 1422
NlaIV GGNNCC 4 cut(s) 172, 173, 231, 1143
NmuCI GTSAC 2 cut(s) 489, 1340
NsiI ATGCAT 1 cut(s) 1161
PagI TCATGA 2 cut(s) 763, 1351
PdmI GAANNNNTTC 1 cut(s) 1527
PfeI GAWTC 2 cut(s) 146, 1583
PflMI CCANNNNNTGG 1 cut(s) 538
PfoI TCCNGGA 1 cut(s) 1405
PkrI GCNGC 1 cut(s) 1381
PleI GAGTC 3 cut(s) 253, 591, 1656
PpsI GAGTC 3 cut(s) 253, 591, 1656
PpuMI RGGWCCY 1 cut(s) 171
PshAI GACNNNNGTC 1 cut(s) 370
Psp5II RGGWCCY 1 cut(s) 171
Psp6I CCWGG 5 cut(s) 193, 438, 1260, 1332, 1405
PspGI CCWGG 5 cut(s) 193, 438, 1260, 1332, 1405
PspN4I GGNNCC 4 cut(s) 172, 173, 231, 1143
PspPI GGNCC 4 cut(s) 171, 291, 1258, 1416
PspPPI RGGWCCY 1 cut(s) 171
PstI CTGCAG 1 cut(s) 742
PsuI RGATCY 1 cut(s) 1324
PvuII CAGCTG 2 cut(s) 185, 591
RsaI GTAC 2 cut(s) 481, 1206
RsaNI GTAC 2 cut(s) 480, 1205
RseI CAYNNNNRTG 1 cut(s) 1008
SaqAI TTAA 6 cut(s) 87, 279, 314, 788, 1296, 1554
SatI GCNGC 1 cut(s) 1380
Sau3AI GATC 7 cut(s) 415, 448, 774, 999, 1324, 1348, 1422
Sau96I GGNCC 4 cut(s) 171, 291, 1258, 1416
SchI GAGTC 3 cut(s) 253, 591, 1657
ScrFI CCNGG 8 cut(s) 195, 285, 440, 1262, 1334, 1407, 1419, 1420
SduI GDGCHC 1 cut(s) 25
SfaNI GCATC 3 cut(s) 1094, 1502, 1623
SfcI CTRYAG 3 cut(s) 592, 738, 1240
SinI GGWCC 3 cut(s) 171, 291, 1258
SmaI CCCGGG 1 cut(s) 1420
SmiMI CAYNNNNRTG 1 cut(s) 1008
SmlI CTYRAG 3 cut(s) 862, 1211, 1295
SmoI CTYRAG 3 cut(s) 862, 1211, 1295
SsiI CCGC 2 cut(s) 269, 956
SspI AATATT 1 cut(s) 581
SspMI CTAG 4 cut(s) 435, 1322, 1568, 1669
StyD4I CCNGG 8 cut(s) 193, 283, 438, 1260, 1332, 1405, 1417, 1418
StyI CCWWGG 1 cut(s) 532
TaaI ACNGT 4 cut(s) 137, 275, 428, 487
TaiI ACGT 2 cut(s) 69, 1094
TaqI TCGA 3 cut(s) 374, 828, 1088
TatI WGTACW 2 cut(s) 479, 1204
TfiI GAWTC 2 cut(s) 146, 1583
Tru1I TTAA 6 cut(s) 87, 279, 314, 788, 1296, 1554
Tru9I TTAA 6 cut(s) 87, 279, 314, 788, 1296, 1554
TscAI CASTG 5 cut(s) 278, 308, 723, 1495, 1518
TseFI GTSAC 2 cut(s) 489, 1340
TseI GCWGC 1 cut(s) 1379
Tsp45I GTSAC 2 cut(s) 489, 1340
TspGWI ACGGA 2 cut(s) 448, 1127
TspMI CCCGGG 1 cut(s) 1418
TspRI CASTG 5 cut(s) 278, 308, 723, 1495, 1518
Van91I CCANNNNNTGG 1 cut(s) 538
Vha464I CTTAAG 1 cut(s) 1295
VneI GTGCAC 1 cut(s) 21
VpaK11BI GGWCC 3 cut(s) 171, 291, 1258
XapI RAATTY 2 cut(s) 557, 910
XmaI CCCGGG 1 cut(s) 1418
XmiI GTMKAC 2 cut(s) 595, 1228
XmnI GAANNNNTTC 1 cut(s) 1527
XspI CTAG 4 cut(s) 435, 1322, 1568, 1669
ZraI GACGTC 1 cut(s) 1092
Zsp2I ATGCAT 1 cut(s) 1161
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.