AT5G63980

Inositol monophosphatase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0008514
Physical Location & Seq
Forward (+)
25610002 .. 25611802
1801 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G63980.1

Sequence Viewer

Length: 1062 bp
ATGGCTTACGAGAAAGAGCTTGATGCTGCTAAGAAAGCTGCTTCACTCGCTGCTCGTCTCTGTCAGAAAGTTCAAAAGGCTTTGTTGCAATCAGATGTGCAATCAAAATCTGATAAAAGTCCAGTGACCGTTGCTGATTATGGTTCACAAGCAGTTGTTAGTTTAGTCTTAGAAAAAGAGCTCAGTTCTGAACCCTTTTCATTGGTGGCTGAAGAGGACTCAGGCGATCTACGCAAGGATGGTTCTCAGGATACTCTGGAGCGCATCACAAAACTCGTGAACGACACTTTGGCTACCGAGGAATCGTTTAATGGCTCTACTTTGTCTACTGATGATCTACTTAGAGCCATTGACTGTGGAACATCTGAAGGTGGTCCAAATGGTCGACACTGGGTCTTGGATCCAATTGATGGCACTAAAGGATTTCTGAGGGGAGATCAATACGCAGTAGCACTAGGATTGCTCGAGGAAGGGAAAGTAGTTTTAGGTGTGCTTGCTTGTCCAAACTTGCCGTTAGCATCCATAGCAGGAAACAACAAGAACAAATCTTCGTCAGACGAAATTGGATGCCTCTTCTTTGCTACAATTGGTTCAGGGACATATATGCAGCTCCTAGATTCAAAATCTTCTCCTGTAAAAGTGCAAGTCTCTAGTGTTGAGAATCCTGAAGAGGCATCGTTCTTCGAGTCATTCGAAGGAGCTCACTCTCTACATGACTTATCCAGCTCCATTGCCAATAAACTCGGTGTCAAAGCTCCACCAGTCCGTATTGATAGCCAAGCAAAGTATGGAGCTTTATCAAGAGGAGATGGAGCTATATACTTACGGTTTCCTCATAAAGGATACCGCGAAAAGATTTGGGACCATGTCGCTGGTGCTATAGTTGTTACAGAGGCGGGTGGAATAGTGACAGATGCAGCAGGAAAGCCACTGGATTTCTCGAAAGGGAAGTATCTTGATTTGGACACAGGCATTATCGTTGCTAACGAGAAGCTAATGCCTCTGCTTTTGAAAGCAGTTCGTGACTCCATAGCTGAGCAAGAGAAAGCTTCAGCTCTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00562 ko00920 ko01100 ko01120 ko04070 map00562 map00920 map01100 map01120 map04070
Pfam Domains
Protein Families
Inositol_P

Protein Analysis

353

Amino Acids

37.56

Weight (kDa)

5.03

Isoelectric Point (pI)

37.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Inositol_P PF00459 38 - 344 1.5e-52 Inositol monophosphatase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 410
AccI GTMKAC 2 cut(s) 326, 385
AccII CGCG 1 cut(s) 849
AciI CCGC 2 cut(s) 847, 896
AclWI GGATC 2 cut(s) 395, 408
AcuI CTGAAG 4 cut(s) 231, 387, 687, 1035
AfiI CCNNNNNNNGG 2 cut(s) 410, 839
AgsI TTSAA 3 cut(s) 74, 621, 1012
AhdI GACNNNNNGTC 1 cut(s) 392
AjuI GAANNNNNNNTTGG 2 cut(s) 272, 304
Alw21I GWGCWC 2 cut(s) 183, 703
Alw26I GTCTC 2 cut(s) 62, 652
AlwI GGATC 2 cut(s) 395, 408
Ama87I CYCGRG 1 cut(s) 464
ApeKI GCWGC 5 cut(s) 26, 38, 50, 607, 917
AspLEI GCGC 1 cut(s) 264
AspS9I GGNCC 2 cut(s) 374, 862
AsuII TTCGAA 1 cut(s) 693
AvaI CYCGRG 1 cut(s) 464
AvaII GGWCC 2 cut(s) 374, 862
BamHI GGATCC 1 cut(s) 400
BanII GRGCYC 2 cut(s) 183, 703
BauI CACGAG 1 cut(s) 275
Bbv12I GWGCWC 2 cut(s) 183, 703
BbvI GCAGC 5 cut(s) 13, 25, 37, 619, 929
BccI CCATC 3 cut(s) 233, 404, 803
BceAI ACGGC 1 cut(s) 496
BciVI GTATCC 2 cut(s) 244, 836
BcoDI GTCTC 2 cut(s) 62, 652
BfaI CTAG 3 cut(s) 455, 614, 651
BfmI CTRYAG 1 cut(s) 879
BfuI GTATCC 2 cut(s) 244, 836
BisI GCNGC 5 cut(s) 27, 39, 51, 608, 918
BlpI GCTNAGC 1 cut(s) 1035
BlsI GCNGC 5 cut(s) 28, 40, 52, 609, 919
Bme18I GGWCC 2 cut(s) 374, 862
BmeRI GACNNNNNGTC 1 cut(s) 392
BmeT110I CYCGRG 1 cut(s) 464
BmgT120I GGNCC 2 cut(s) 374, 862
BmiI GGNNCC 2 cut(s) 402, 863
BmrI ACTGGG 1 cut(s) 400
BmsI GCATC 6 cut(s) 13, 273, 527, 557, 683, 904
BmuI ACTGGG 1 cut(s) 400
BpmI CTGGAG 1 cut(s) 278
Bpu1102I GCTNAGC 1 cut(s) 1035
Bpu14I TTCGAA 1 cut(s) 693
BsaJI CCNNGG 1 cut(s) 297
Bsc4I CCNNNNNNNGG 2 cut(s) 410, 839
Bse1I ACTGG 4 cut(s) 122, 395, 761, 936
Bse3DI GCAATG 1 cut(s) 729
BseDI CCNNGG 1 cut(s) 297
BseGI GGATG 3 cut(s) 244, 518, 572
BseLI CCNNNNNNNGG 2 cut(s) 410, 839
BseMI GCAATG 1 cut(s) 729
BseMII CTCAG 5 cut(s) 196, 234, 260, 419, 1026
BseNI ACTGG 4 cut(s) 122, 395, 761, 936
BseRI GAGGAG 1 cut(s) 819
BseXI GCAGC 5 cut(s) 13, 25, 37, 619, 929
Bsh1236I CGCG 1 cut(s) 849
BsiHKAI GWGCWC 2 cut(s) 183, 703
BsiHKCI CYCGRG 1 cut(s) 464
BslFI GGGAC 2 cut(s) 610, 875
BslI CCNNNNNNNGG 2 cut(s) 410, 839
BsmAI GTCTC 2 cut(s) 62, 652
BsmBI CGTCTC 1 cut(s) 62
BsmFI GGGAC 2 cut(s) 610, 875
BsoBI CYCGRG 1 cut(s) 464
Bsp119I TTCGAA 1 cut(s) 693
Bsp1286I GDGCHC 2 cut(s) 183, 703
Bsp143I GATC 4 cut(s) 226, 334, 400, 436
Bsp1720I GCTNAGC 1 cut(s) 1035
BspACI CCGC 2 cut(s) 847, 896
BspCNI CTCAG 5 cut(s) 195, 233, 259, 420, 1027
BspFNI CGCG 1 cut(s) 849
BspLI GGNNCC 2 cut(s) 402, 863
BspPI GGATC 2 cut(s) 395, 408
BspT104I TTCGAA 1 cut(s) 693
BsrDI GCAATG 1 cut(s) 729
BsrI ACTGG 4 cut(s) 122, 395, 761, 936
BssECI CCNNGG 1 cut(s) 297
BssMI GATC 4 cut(s) 226, 334, 400, 436
BssSI CACGAG 1 cut(s) 275
Bst2BI CACGAG 1 cut(s) 275
Bst4CI ACNGT 3 cut(s) 130, 356, 828
Bst6I CTCTTC 3 cut(s) 207, 578, 663
BstBI TTCGAA 1 cut(s) 693
BstC8I GCNNGC 1 cut(s) 495
BstDEI CTNAG 8 cut(s) 30, 169, 182, 220, 246, 341, 428, 1035
BstENI CCTNNNNNAGG 1 cut(s) 837
BstF5I GGATG 3 cut(s) 244, 518, 572
BstFNI CGCG 1 cut(s) 849
BstHHI GCGC 1 cut(s) 264
BstKTI GATC 4 cut(s) 229, 337, 403, 439
BstMAI GTCTC 2 cut(s) 62, 652
BstMBI GATC 4 cut(s) 226, 334, 400, 436
BstMWI GCNNNNNNNGC 4 cut(s) 35, 47, 231, 524
BstSFI CTRYAG 1 cut(s) 879
BstUI CGCG 1 cut(s) 849
BstV1I GCAGC 5 cut(s) 13, 25, 37, 619, 929
BstX2I RGATCY 1 cut(s) 400
BstXI CCANNNNNNTGG 1 cut(s) 872
BstYI RGATCY 1 cut(s) 400
BsuI GTATCC 2 cut(s) 244, 836
BtsCI GGATG 3 cut(s) 244, 518, 572
BtsIMutI CAGTG 3 cut(s) 129, 388, 929
Cac8I GCNNGC 1 cut(s) 495
CfoI GCGC 1 cut(s) 264
Cfr13I GGNCC 2 cut(s) 374, 862
CviAII CATG 2 cut(s) 713, 866
DdeI CTNAG 8 cut(s) 30, 169, 182, 220, 246, 341, 428, 1035
DpnI GATC 4 cut(s) 228, 336, 402, 438
DpnII GATC 4 cut(s) 226, 334, 400, 436
DriI GACNNNNNGTC 1 cut(s) 392
Eam1104I CTCTTC 3 cut(s) 207, 578, 663
Eam1105I GACNNNNNGTC 1 cut(s) 392
EarI CTCTTC 3 cut(s) 207, 578, 663
Ecl136II GAGCTC 2 cut(s) 181, 701
Eco24I GRGCYC 2 cut(s) 183, 703
Eco47I GGWCC 2 cut(s) 374, 862
Eco53kI GAGCTC 2 cut(s) 181, 701
Eco57I CTGAAG 4 cut(s) 231, 387, 687, 1035
Eco88I CYCGRG 1 cut(s) 464
EcoICRI GAGCTC 2 cut(s) 181, 701
EcoNI CCTNNNNNAGG 1 cut(s) 837
EcoT38I GRGCYC 2 cut(s) 183, 703
Esp3I CGTCTC 1 cut(s) 62
FaeI CATG 2 cut(s) 716, 869
FaqI GGGAC 2 cut(s) 610, 875
FatI CATG 2 cut(s) 712, 865
FauI CCCGC 1 cut(s) 889
FblI GTMKAC 2 cut(s) 326, 385
Fnu4HI GCNGC 5 cut(s) 27, 39, 51, 608, 918
FokI GGATG 3 cut(s) 251, 505, 579
FriOI GRGCYC 2 cut(s) 183, 703
Fsp4HI GCNGC 5 cut(s) 27, 39, 51, 608, 918
FspBI CTAG 3 cut(s) 455, 614, 651
GlaI GCGC 1 cut(s) 263
GluI GCNGC 5 cut(s) 27, 39, 51, 608, 918
GsuI CTGGAG 1 cut(s) 278
HhaI GCGC 1 cut(s) 264
Hin1II CATG 2 cut(s) 716, 869
Hin6I GCGC 1 cut(s) 262
HinP1I GCGC 1 cut(s) 262
HincII GTYRAC 1 cut(s) 386
HindII GTYRAC 1 cut(s) 386
HindIII AAGCTT 1 cut(s) 1047
HinfI GANTC 6 cut(s) 218, 302, 617, 661, 686, 1025
Hpy166II GTNNAC 4 cut(s) 146, 280, 327, 386
Hpy188I TCNGA 8 cut(s) 66, 94, 112, 190, 367, 429, 556, 1061
Hpy188III TCNNGA 8 cut(s) 248, 257, 277, 665, 801, 940, 956, 1022
Hpy8I GTNNAC 4 cut(s) 146, 280, 327, 386
HpyAV CCTTC 3 cut(s) 362, 464, 689
HpyCH4III ACNGT 3 cut(s) 130, 356, 828
HpyCH4V TGCA 5 cut(s) 88, 100, 607, 643, 917
HpyF10VI GCNNNNNNNGC 4 cut(s) 35, 47, 231, 524
HpyF3I CTNAG 8 cut(s) 30, 169, 182, 220, 246, 341, 428, 1035
Hsp92II CATG 2 cut(s) 716, 869
HspAI GCGC 1 cut(s) 262
Kzo9I GATC 4 cut(s) 226, 334, 400, 436
LmnI GCTCC 7 cut(s) 259, 615, 698, 731, 760, 791, 812
Lsp1109I GCAGC 5 cut(s) 13, 25, 37, 619, 929
LweI GCATC 6 cut(s) 13, 273, 527, 557, 683, 904
MaeI CTAG 3 cut(s) 455, 614, 651
MaeIII GTNAC 4 cut(s) 124, 886, 907, 1022
MalI GATC 4 cut(s) 228, 336, 402, 438
MboI GATC 4 cut(s) 226, 334, 400, 436
MboII GAAGA 6 cut(s) 224, 540, 565, 618, 673, 680
MfeI CAATTG 2 cut(s) 405, 585
MflI RGATCY 1 cut(s) 400
MhlI GDGCHC 2 cut(s) 183, 703
MluCI AATT 3 cut(s) 405, 561, 585
MlyI GAGTC 3 cut(s) 212, 695, 1019
MseI TTAA 1 cut(s) 309
MunI CAATTG 2 cut(s) 405, 585
MvnI CGCG 1 cut(s) 849
MwoI GCNNNNNNNGC 4 cut(s) 35, 47, 231, 524
NdeII GATC 4 cut(s) 226, 334, 400, 436
NlaIII CATG 2 cut(s) 716, 869
NlaIV GGNNCC 2 cut(s) 402, 863
NmuCI GTSAC 3 cut(s) 124, 907, 1022
NspV TTCGAA 1 cut(s) 693
PaeR7I CTCGAG 1 cut(s) 464
PcsI WCGNNNNNNNCGW 2 cut(s) 690, 984
PfeI GAWTC 3 cut(s) 302, 617, 661
PflFI GACNNNGTC 1 cut(s) 866
PflMI CCANNNNNTGG 1 cut(s) 410
PkrI GCNGC 5 cut(s) 28, 40, 52, 609, 919
PleI GAGTC 3 cut(s) 212, 694, 1019
PpsI GAGTC 3 cut(s) 212, 694, 1019
Psp124BI GAGCTC 2 cut(s) 183, 703
PspN4I GGNNCC 2 cut(s) 402, 863
PspPI GGNCC 2 cut(s) 374, 862
PspXI VCTCGAGB 1 cut(s) 464
PsuI RGATCY 1 cut(s) 400
PsyI GACNNNGTC 1 cut(s) 866
SacI GAGCTC 2 cut(s) 183, 703
SalI GTCGAC 1 cut(s) 384
SaqAI TTAA 1 cut(s) 309
SatI GCNGC 5 cut(s) 27, 39, 51, 608, 918
Sau3AI GATC 4 cut(s) 226, 334, 400, 436
Sau96I GGNCC 2 cut(s) 374, 862
SchI GAGTC 3 cut(s) 212, 695, 1019
SduI GDGCHC 2 cut(s) 183, 703
SfaNI GCATC 6 cut(s) 13, 273, 527, 557, 683, 904
SfcI CTRYAG 1 cut(s) 879
Sfr274I CTCGAG 1 cut(s) 464
SfuI TTCGAA 1 cut(s) 693
SinI GGWCC 2 cut(s) 374, 862
SlaI CTCGAG 1 cut(s) 464
SmlI CTYRAG 1 cut(s) 464
SmoI CTYRAG 1 cut(s) 464
Sse9I AATT 3 cut(s) 405, 561, 585
SsiI CCGC 2 cut(s) 847, 896
SspMI CTAG 3 cut(s) 455, 614, 651
SstI GAGCTC 2 cut(s) 183, 703
TaaI ACNGT 3 cut(s) 130, 356, 828
TaqI TCGA 5 cut(s) 385, 465, 684, 693, 941
TasI AATT 3 cut(s) 405, 561, 585
TfiI GAWTC 3 cut(s) 302, 617, 661
Tru1I TTAA 1 cut(s) 309
Tru9I TTAA 1 cut(s) 309
TscAI CASTG 3 cut(s) 129, 395, 936
TseFI GTSAC 3 cut(s) 124, 907, 1022
TseI GCWGC 5 cut(s) 26, 38, 50, 607, 917
Tsp45I GTSAC 3 cut(s) 124, 907, 1022
TspDTI ATGAA 1 cut(s) 189
TspGWI ACGGA 1 cut(s) 755
TspRI CASTG 3 cut(s) 129, 395, 936
Tth111I GACNNNGTC 1 cut(s) 866
Van91I CCANNNNNTGG 1 cut(s) 410
VpaK11BI GGWCC 2 cut(s) 374, 862
XagI CCTNNNNNAGG 1 cut(s) 837
XcmI CCANNNNNNNNNTGG 1 cut(s) 785
XhoI CTCGAG 1 cut(s) 464
XmiI GTMKAC 2 cut(s) 326, 385
XspI CTAG 3 cut(s) 455, 614, 651
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.