Prupe.4G272000_v2.0.a1

SAL1 phosphatase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0008514
Physical Location & Seq
Forward (+)
22322623 .. 22329521
6899 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G272000.1

Sequence Viewer

Length: 1194 bp
ATGGGTATAAATTGCTTAAGAGTAGTGCCCAAATTTCCACCTTCAGCAAAGCACAAAATCATCATCTCACACTCATTCTCTCACTCTCTCTTATTTACCAAAAGGTCCTCTAGGGCAATACACGCAGCAGCTGCATCTTCTTCAATGTCTTACGAAAAGGAACTCGCTGCTGCCAAAAAGGCTGCCTCTCTCGCTGCTCTCCTCTGCCAGAAGGTACAAAAGGCACTGTTGCAGTCAGACATTCATTCCAAATCAGATAAAAGTCCAGTCACTGTGGCAGATTACGGTTCACAGGCTCTTGTTAGTTTGGTACTGGAAAGGGAACTTCCTTCTGAATCATTCTCGCTAGTGGCTGAGGAGGACTCGGGAGATCTTCGTGGTAACAGTGGCCAGGAGACACTACAGCGCATCAGAACACTTGTTAATGATACTCTTGCAAACAATGAATATTCTAGCGTTTCTAATTTAACCACTGATGATGTTCTTAGGGCTATTGACAATGGGAAATCTGAAGGTGGTTCTAGGGGCCAGCACTGGGTTTTAGATCCCATAGATGGTACCAAAGGGTTTCTTAGAGGAGATCAATATGCCATAGCATTGGCATTGCTGGATGAAGGAAAAGTTGTGTTGGGTGTCCTGGCCTGTCCGAATCTTCCTCTGACATCCATTAGTGGTGAAAATCAGCAGTCTTCACAAGATAAACTTGGCTGTCTTTTCTTTGCTACAGTTGGTACAGGAACATATATGCAGCCACTGGATGGTTCTTCCCTGCTAAAGGTACACGTCAGCGCTACTGAGAATCCTGAAGAAGCTTCATTGTTTGAATCTTTTGAAGCGGCACACTCCTTGCATGACTTGTCTAGCACCATTGCTAAGAAACTTGGCTTCAAAGCCCCGCCAGTTAGAATTGACAGCCAGGCAAAGTATGGGGCACTTTCCAGAGGAGATGGAGCGATATATCTTCGTTTCCCTCATAAAGGATATCGTGAGAAAATATGGGATCATGCTGCTGGGTGCATTGTCGTGACTGAAGCTGGGGGTGTGGTGGCAGATGCTGCAGGGAACCCATTGGATTTTTCAAAAGGGAAATATCTTGATCTTGAAACAGGCATAATTGTTACCAATCAGAAATTGATGCCATTACTCTTGAAGGCAGTTAAAGAATCTCTGGAAGAGAGAGCTTCATCCTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00562 ko00920 ko01100 ko01120 ko04070 map00562 map00920 map01100 map01120 map04070
Pfam Domains
Protein Families
Inositol_P

Protein Analysis

398

Amino Acids

42.51

Weight (kDa)

6.43

Isoelectric Point (pI)

36.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 557
AccB1I GGYRCC 1 cut(s) 557
AccB7I CCANNNNNTGG 1 cut(s) 758
AciI CCGC 2 cut(s) 836, 896
AclWI GGATC 2 cut(s) 539, 1008
AcoI YGGCCR 1 cut(s) 388
AcsI RAATTY 1 cut(s) 32
AcuI CTGAAG 4 cut(s) 27, 531, 825, 1050
AfaI GTAC 5 cut(s) 216, 312, 559, 733, 780
AfeI AGCGCT 1 cut(s) 790
AfiI CCNNNNNNNGG 5 cut(s) 535, 554, 758, 775, 977
AflII CTTAAG 1 cut(s) 16
AflIII ACRYGT 1 cut(s) 781
AgsI TTSAA 7 cut(s) 144, 824, 833, 889, 1080, 1103, 1150
AjiI CACGTC 1 cut(s) 784
AjnI CCWGG 3 cut(s) 390, 636, 915
AluBI AGCT 4 cut(s) 131, 812, 1034, 1181
AluI AGCT 4 cut(s) 131, 812, 1034, 1181
Alw26I GTCTC 1 cut(s) 389
AlwI GGATC 2 cut(s) 539, 1008
AlwNI CAGNNNCTG 4 cut(s) 131, 272, 754, 1055
Ama87I CYCGRG 1 cut(s) 364
Aor51HI AGCGCT 1 cut(s) 790
AoxI GGCC 3 cut(s) 388, 526, 639
ApoI RAATTY 1 cut(s) 32
Asp718I GGTACC 1 cut(s) 557
AspLEI GCGC 2 cut(s) 408, 791
AspS9I GGNCC 2 cut(s) 105, 526
AsuHPI GGTGA 1 cut(s) 686
AvaI CYCGRG 1 cut(s) 364
AvaII GGWCC 1 cut(s) 105
BaeGI GKGCMC 2 cut(s) 30, 934
BalI TGGCCA 1 cut(s) 390
BanI GGYRCC 1 cut(s) 557
BbsI GAAGAC 1 cut(s) 681
BbvCI CCTCAGC 1 cut(s) 354
BccI CCATC 3 cut(s) 548, 752, 941
BciT130I CCWGG 3 cut(s) 392, 638, 917
BcoDI GTCTC 1 cut(s) 389
BfaI CTAG 5 cut(s) 111, 347, 453, 522, 861
BfmI CTRYAG 3 cut(s) 401, 723, 1056
BfoI RGCGCY 1 cut(s) 792
BfrI CTTAAG 1 cut(s) 16
BglI GCCNNNNNGGC 1 cut(s) 179
BglII AGATCT 1 cut(s) 370
Bme1390I CCNGG 3 cut(s) 392, 638, 917
Bme18I GGWCC 1 cut(s) 105
BmeT110I CYCGRG 1 cut(s) 364
BmgBI CACGTC 1 cut(s) 784
BmgT120I GGNCC 2 cut(s) 105, 526
BmiI GGNNCC 3 cut(s) 527, 559, 1064
BmrFI CCNGG 3 cut(s) 392, 638, 917
BmrI ACTGGG 1 cut(s) 544
BmsI GCATC 4 cut(s) 143, 417, 1042, 1125
BmuI ACTGGG 1 cut(s) 544
BpiI GAAGAC 1 cut(s) 681
BplI GAGNNNNNCTC 2 cut(s) 347, 379
Bpu10I CCTNAGC 1 cut(s) 354
Bsc4I CCNNNNNNNGG 5 cut(s) 535, 554, 758, 775, 977
Bse1I ACTGG 5 cut(s) 266, 318, 539, 759, 899
Bse3DI GCAATG 2 cut(s) 602, 867
BseBI CCWGG 3 cut(s) 392, 638, 917
BseGI GGATG 4 cut(s) 616, 662, 763, 1184
BseLI CCNNNNNNNGG 5 cut(s) 535, 554, 758, 775, 977
BseMI GCAATG 2 cut(s) 602, 867
BseMII CTCAG 2 cut(s) 345, 786
BseNI ACTGG 5 cut(s) 266, 318, 539, 759, 899
BseRI GAGGAG 4 cut(s) 191, 371, 591, 957
BseSI GKGCMC 2 cut(s) 30, 934
BseYI CCCAGC 2 cut(s) 1010, 1034
BshFI GGCC 3 cut(s) 390, 528, 641
BshNI GGYRCC 1 cut(s) 557
BsiHKCI CYCGRG 1 cut(s) 364
BslI CCNNNNNNNGG 5 cut(s) 535, 554, 758, 775, 977
BsmAI GTCTC 1 cut(s) 389
BsnI GGCC 3 cut(s) 390, 528, 641
BsoBI CYCGRG 1 cut(s) 364
Bsp1286I GDGCHC 2 cut(s) 30, 934
Bsp143I GATC 5 cut(s) 370, 544, 580, 1000, 1096
BspACI CCGC 2 cut(s) 836, 896
BspANI GGCC 3 cut(s) 390, 528, 641
BspCNI CTCAG 2 cut(s) 346, 787
BspLI GGNNCC 3 cut(s) 527, 559, 1064
BspMAI CTGCAG 1 cut(s) 1060
BspPI GGATC 2 cut(s) 539, 1008
BspT107I GGYRCC 1 cut(s) 557
BspTI CTTAAG 1 cut(s) 16
BsrDI GCAATG 2 cut(s) 602, 867
BsrI ACTGG 5 cut(s) 266, 318, 539, 759, 899
BssMI GATC 5 cut(s) 370, 544, 580, 1000, 1096
Bst2UI CCWGG 3 cut(s) 392, 638, 917
Bst4CI ACNGT 5 cut(s) 228, 274, 287, 386, 727
Bst6I CTCTTC 1 cut(s) 1167
BstAFI CTTAAG 1 cut(s) 16
BstAPI GCANNNNNTGC 2 cut(s) 131, 1055
BstC8I GCNNGC 1 cut(s) 530
BstDEI CTNAG 5 cut(s) 354, 485, 572, 795, 873
BstENI CCTNNNNNAGG 2 cut(s) 773, 975
BstF5I GGATG 4 cut(s) 616, 662, 763, 1184
BstH2I RGCGCY 1 cut(s) 792
BstHHI GCGC 2 cut(s) 408, 791
BstKTI GATC 5 cut(s) 373, 547, 583, 1003, 1099
BstMAI GTCTC 1 cut(s) 389
BstMBI GATC 5 cut(s) 370, 544, 580, 1000, 1096
BstMWI GCNNNNNNNGC 5 cut(s) 122, 131, 179, 191, 1055
BstNI CCWGG 3 cut(s) 392, 638, 917
BstSCI CCNGG 3 cut(s) 390, 636, 915
BstSFI CTRYAG 3 cut(s) 401, 723, 1056
BstSLI GKGCMC 2 cut(s) 30, 934
BstV2I GAAGAC 1 cut(s) 681
BstX2I RGATCY 2 cut(s) 370, 544
BstXI CCANNNNNNTGG 1 cut(s) 598
BstYI RGATCY 2 cut(s) 370, 544
BsuRI GGCC 3 cut(s) 390, 528, 641
BtrI CACGTC 1 cut(s) 784
BtsCI GGATG 4 cut(s) 616, 662, 763, 1184
BtsIMutI CAGTG 6 cut(s) 224, 270, 391, 471, 532, 752
Cac8I GCNNGC 1 cut(s) 530
CaiI CAGNNNCTG 4 cut(s) 131, 272, 754, 1055
CfoI GCGC 2 cut(s) 408, 791
Cfr13I GGNCC 2 cut(s) 105, 526
Csp6I GTAC 5 cut(s) 215, 311, 558, 732, 779
CviAII CATG 2 cut(s) 851, 1004
CviQI GTAC 5 cut(s) 215, 311, 558, 732, 779
DdeI CTNAG 5 cut(s) 354, 485, 572, 795, 873
DpnI GATC 5 cut(s) 372, 546, 582, 1002, 1098
DpnII GATC 5 cut(s) 370, 544, 580, 1000, 1096
EaeI YGGCCR 1 cut(s) 388
Eam1104I CTCTTC 1 cut(s) 1167
EarI CTCTTC 1 cut(s) 1167
Eco32I GATATC 1 cut(s) 983
Eco47I GGWCC 1 cut(s) 105
Eco47III AGCGCT 1 cut(s) 790
Eco57I CTGAAG 4 cut(s) 27, 531, 825, 1050
Eco88I CYCGRG 1 cut(s) 364
EcoNI CCTNNNNNAGG 2 cut(s) 773, 975
EcoO109I RGGNCCY 1 cut(s) 105
EcoRII CCWGG 3 cut(s) 390, 636, 915
EcoRV GATATC 1 cut(s) 983
FaeI CATG 2 cut(s) 854, 1007
FalI AAGNNNNNCTT 4 cut(s) 555, 587, 687, 719
FatI CATG 2 cut(s) 850, 1003
FauI CCCGC 1 cut(s) 903
FokI GGATG 4 cut(s) 623, 649, 770, 1171
FspBI CTAG 5 cut(s) 111, 347, 453, 522, 861
GlaI GCGC 2 cut(s) 407, 790
GsaI CCCAGC 2 cut(s) 1014, 1038
HaeII RGCGCY 1 cut(s) 792
HaeIII GGCC 3 cut(s) 390, 528, 641
HhaI GCGC 2 cut(s) 408, 791
Hin1II CATG 2 cut(s) 854, 1007
Hin6I GCGC 2 cut(s) 406, 789
HinP1I GCGC 2 cut(s) 406, 789
HindIII AAGCTT 1 cut(s) 810
HinfI GANTC 6 cut(s) 335, 362, 649, 799, 824, 1163
HphI GGTGA 1 cut(s) 686
Hpy166II GTNNAC 2 cut(s) 290, 781
Hpy188I TCNGA 8 cut(s) 238, 256, 334, 413, 511, 648, 660, 1128
Hpy188III TCNNGA 9 cut(s) 366, 803, 939, 986, 1024, 1094, 1100, 1147, 1169
Hpy8I GTNNAC 2 cut(s) 290, 781
HpyAV CCTTC 6 cut(s) 51, 205, 339, 506, 608, 1144
HpyCH4III ACNGT 5 cut(s) 228, 274, 287, 386, 727
HpyCH4IV ACGT 1 cut(s) 783
HpyCH4V TGCA 7 cut(s) 134, 232, 437, 748, 850, 1017, 1058
HpyF10VI GCNNNNNNNGC 5 cut(s) 122, 131, 179, 191, 1055
HpyF3I CTNAG 5 cut(s) 354, 485, 572, 795, 873
HpySE526I ACGT 1 cut(s) 783
Hsp92II CATG 2 cut(s) 854, 1007
HspAI GCGC 2 cut(s) 406, 789
KpnI GGTACC 1 cut(s) 561
Kzo9I GATC 5 cut(s) 370, 544, 580, 1000, 1096
LmnI GCTCC 1 cut(s) 950
LweI GCATC 4 cut(s) 143, 417, 1042, 1125
MaeI CTAG 5 cut(s) 111, 347, 453, 522, 861
MaeII ACGT 1 cut(s) 783
MaeIII GTNAC 4 cut(s) 268, 380, 1024, 1117
MalI GATC 5 cut(s) 372, 546, 582, 1002, 1098
MboI GATC 5 cut(s) 370, 544, 580, 1000, 1096
MboII GAAGA 9 cut(s) 129, 132, 365, 644, 681, 756, 818, 953, 1184
MflI RGATCY 2 cut(s) 370, 544
MhlI GDGCHC 2 cut(s) 30, 934
MlsI TGGCCA 1 cut(s) 390
MluCI AATT 6 cut(s) 10, 32, 463, 906, 1113, 1130
MluNI TGGCCA 1 cut(s) 390
MlyI GAGTC 1 cut(s) 356
MnlI CCTC 9 cut(s) 118, 196, 212, 349, 352, 569, 666, 935, 981
Mox20I TGGCCA 1 cut(s) 390
MscI TGGCCA 1 cut(s) 390
MseI TTAA 4 cut(s) 17, 423, 467, 1158
MslI CAYNNNNRTG 2 cut(s) 1022, 1189
Msp20I TGGCCA 1 cut(s) 390
MspA1I CMGCKG 1 cut(s) 131
MspCI CTTAAG 1 cut(s) 16
MspR9I CCNGG 3 cut(s) 392, 638, 917
MvaI CCWGG 3 cut(s) 392, 638, 917
MwoI GCNNNNNNNGC 5 cut(s) 122, 131, 179, 191, 1055
NdeII GATC 5 cut(s) 370, 544, 580, 1000, 1096
NlaIII CATG 2 cut(s) 854, 1007
NlaIV GGNNCC 3 cut(s) 527, 559, 1064
NmuCI GTSAC 2 cut(s) 268, 1024
PfeI GAWTC 5 cut(s) 335, 649, 799, 824, 1163
PflMI CCANNNNNTGG 1 cut(s) 758
PleI GAGTC 1 cut(s) 356
PpsI GAGTC 1 cut(s) 356
PpuMI RGGWCCY 1 cut(s) 105
Psp5II RGGWCCY 1 cut(s) 105
Psp6I CCWGG 3 cut(s) 390, 636, 915
PspFI CCCAGC 2 cut(s) 1010, 1034
PspGI CCWGG 3 cut(s) 390, 636, 915
PspN4I GGNNCC 3 cut(s) 527, 559, 1064
PspPI GGNCC 2 cut(s) 105, 526
PspPPI RGGWCCY 1 cut(s) 105
PstI CTGCAG 1 cut(s) 1060
PstNI CAGNNNCTG 4 cut(s) 131, 272, 754, 1055
PsuI RGATCY 2 cut(s) 370, 544
PvuII CAGCTG 1 cut(s) 131
RsaI GTAC 5 cut(s) 216, 312, 559, 733, 780
RsaNI GTAC 5 cut(s) 215, 311, 558, 732, 779
RseI CAYNNNNRTG 2 cut(s) 1022, 1189
SaqAI TTAA 4 cut(s) 17, 423, 467, 1158
Sau3AI GATC 5 cut(s) 370, 544, 580, 1000, 1096
Sau96I GGNCC 2 cut(s) 105, 526
SchI GAGTC 1 cut(s) 356
ScrFI CCNGG 3 cut(s) 392, 638, 917
SduI GDGCHC 2 cut(s) 30, 934
SfaNI GCATC 4 cut(s) 143, 417, 1042, 1125
SfcI CTRYAG 3 cut(s) 401, 723, 1056
SinI GGWCC 1 cut(s) 105
SmiMI CAYNNNNRTG 2 cut(s) 1022, 1189
SmlI CTYRAG 1 cut(s) 16
SmoI CTYRAG 1 cut(s) 16
Sse9I AATT 6 cut(s) 10, 32, 463, 906, 1113, 1130
SsiI CCGC 2 cut(s) 836, 896
SspI AATATT 1 cut(s) 449
SspMI CTAG 5 cut(s) 111, 347, 453, 522, 861
StyD4I CCNGG 3 cut(s) 390, 636, 915
TaaI ACNGT 5 cut(s) 228, 274, 287, 386, 727
TaiI ACGT 1 cut(s) 786
TasI AATT 6 cut(s) 10, 32, 463, 906, 1113, 1130
TauI GCSGC 1 cut(s) 839
TfiI GAWTC 5 cut(s) 335, 649, 799, 824, 1163
Tru1I TTAA 4 cut(s) 17, 423, 467, 1158
Tru9I TTAA 4 cut(s) 17, 423, 467, 1158
TscAI CASTG 6 cut(s) 231, 277, 391, 478, 539, 759
TseFI GTSAC 2 cut(s) 268, 1024
Tsp45I GTSAC 2 cut(s) 268, 1024
TspDTI ATGAA 5 cut(s) 233, 459, 627, 804, 1173
TspRI CASTG 6 cut(s) 231, 277, 391, 478, 539, 759
Van91I CCANNNNNTGG 1 cut(s) 758
Vha464I CTTAAG 1 cut(s) 16
VpaK11BI GGWCC 1 cut(s) 105
XagI CCTNNNNNAGG 2 cut(s) 773, 975
XapI RAATTY 1 cut(s) 32
XcmI CCANNNNNNNNNTGG 1 cut(s) 923
XspI CTAG 5 cut(s) 111, 347, 453, 522, 861
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.