Rh2BG301600

SAL1 phosphatase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0008514
Physical Location & Seq
Forward (+)
34903718 .. 34908876
5159 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG301600.1

Sequence Viewer

Length: 1083 bp
ATGGCTATAAATTGCTTGAGAGCAATACCCAAAATTCCGCATTCTTCAAACCCCAAAATCACCAGCTCATTCTCCACCTCTTTCCTTTTCTCTTCCAACCCCAAAAGTGTCTTTTCATCAATTCGAGCTTCAATGTCTTACGAGAAGGAGCTCGCTGCTGCCAAGAAAGCTGCCTCCGTCGCCGCTCGCCTCTGCCAGAAGGTACAACAGGCGCTTTTGCAGTCAGATGTTCATTCAAAATTAGATAAAAGTCCTGTCACAGTGGCCGATTATGGTTCACAGGCTCTTGTTAGTTTTGTTCTGGAAAGGGAACTTCCTTCGGAATCATTCTCTCTAGTAGCTGAGGAGGATTCAGGAGATCTCCGAATAGACAGTGGCAGGGAAACACTAGAACGCATCACAAAACTTGTTAATGATACTCTTGCCAACAGTGACAGTTATAGTGATTCTAATTTGACCACTGAAGATGTGCTCAGGGCTATTGACAATGGCAAATCTGAAGGTGGTTCTTGTGGCCGGCACTGGGTTTTAGATCCCATTGACGGTACCAAAGGGTTTCTTAGAGGAGACCAATATGCCATAGCATTAGCATTACTGGATGAAGGAAAAGTTGTGTTGGGTGTCCTGGCTTGTCCAAATCTCCCCCTGGCGTCCATTAGTGGTGATAATCGGCAGTTTTCTCATGATAAAATTGGTTGCCTTTTCTTTGCAAAACTTGGTGCAGGAACATATATGCAGCCATTGGATGGTTCATCACCGCTAAAGGTGCATGTCAGTGCTACTGAAAATCCTGAAGACGCCTCATTCTTTGAGTCTTATGAAGCAGCACACTCCTTGCATGGCTTGTCTAGCACCATTGCCAAGAAACTTGGAGTCAAAGCACCGCCAGTTAGAATTGACAGCCAGGCAAAGTATGGGGCACTTTCCAGAGGAGATGGAGCAATATATCTTCGTTTCCCCCATAAAGGATATCGCGAGAAAATATGGGATCATGCTGCTGGGTGCATTGTTGTTACTGGTAAAGAATTCTTTCCAATACTCGATTCTTCCCTTAATTGTGATGGATGGGGCTTTGTAGGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00562 ko00920 ko01100 ko01120 ko04070 map00562 map00920 map01100 map01120 map04070
Pfam Domains
Protein Families
Inositol_P

Protein Analysis

360

Amino Acids

38.74

Weight (kDa)

6.16

Isoelectric Point (pI)

35.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Inositol_P PF00459 82 - 339 2.8e-37 Inositol monophosphatase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 545
AccB1I GGYRCC 1 cut(s) 545
AccB7I CCANNNNNTGG 1 cut(s) 746
AccBSI CCGCTC 1 cut(s) 185
AccII CGCG 1 cut(s) 975
AciI CCGC 4 cut(s) 38, 183, 758, 884
AclWI GGATC 2 cut(s) 527, 996
AcoI YGGCCR 2 cut(s) 264, 514
AcsI RAATTY 2 cut(s) 33, 1025
AcuI CTGAAG 3 cut(s) 483, 519, 813
AcyI GRCGYC 2 cut(s) 650, 798
AfaI GTAC 2 cut(s) 204, 547
AfiI CCNNNNNNNGG 4 cut(s) 523, 542, 746, 965
AgsI TTSAA 3 cut(s) 48, 132, 237
AjnI CCWGG 3 cut(s) 624, 645, 903
AjuI GAANNNNNNNTTGG 2 cut(s) 1027, 1059
AluBI AGCT 5 cut(s) 66, 128, 151, 170, 341
AluI AGCT 5 cut(s) 66, 128, 151, 170, 341
Alw21I GWGCWC 2 cut(s) 153, 474
Alw26I GTCTC 1 cut(s) 561
AlwI GGATC 2 cut(s) 527, 996
AoxI GGCC 2 cut(s) 264, 514
ApeKI GCWGC 6 cut(s) 155, 158, 170, 736, 824, 995
ApoI RAATTY 2 cut(s) 33, 1025
Asp700I GAANNNNTTC 1 cut(s) 1029
Asp718I GGTACC 1 cut(s) 545
AspLEI GCGC 1 cut(s) 214
AsuHPI GGTGA 3 cut(s) 52, 674, 747
BaeGI GKGCMC 1 cut(s) 922
BanI GGYRCC 1 cut(s) 545
BanII GRGCYC 1 cut(s) 153
BbsI GAAGAC 1 cut(s) 801
Bbv12I GWGCWC 2 cut(s) 153, 474
BbvCI CCTCAGC 1 cut(s) 342
BbvI GCAGC 6 cut(s) 142, 145, 157, 748, 836, 982
BccI CCATC 4 cut(s) 740, 929, 1055, 1059
BciT130I CCWGG 3 cut(s) 626, 647, 905
BcoDI GTCTC 1 cut(s) 561
BfaI CTAG 3 cut(s) 335, 389, 849
BfoI RGCGCY 1 cut(s) 215
BglII AGATCT 1 cut(s) 358
BisI GCNGC 7 cut(s) 156, 159, 171, 183, 737, 825, 996
BlsI GCNGC 7 cut(s) 157, 160, 172, 184, 738, 826, 997
Bme1390I CCNGG 3 cut(s) 626, 647, 905
BmiI GGNNCC 1 cut(s) 547
BmrFI CCNGG 3 cut(s) 626, 647, 905
BmrI ACTGGG 1 cut(s) 532
BmsI GCATC 1 cut(s) 405
BmuI ACTGGG 1 cut(s) 532
BpiI GAAGAC 1 cut(s) 801
Bpu10I CCTNAGC 2 cut(s) 342, 473
BpuEI CTTGAG 1 cut(s) 37
BsaHI GRCGYC 2 cut(s) 650, 798
BsaI GGTCTC 1 cut(s) 561
BsaJI CCNNGG 1 cut(s) 645
Bsc4I CCNNNNNNNGG 4 cut(s) 523, 542, 746, 965
Bse118I RCCGGY 1 cut(s) 516
Bse1I ACTGG 4 cut(s) 527, 600, 887, 1021
Bse3DI GCAATG 1 cut(s) 855
BseBI CCWGG 3 cut(s) 626, 647, 905
BseDI CCNNGG 1 cut(s) 645
BseGI GGATG 3 cut(s) 604, 751, 1070
BseLI CCNNNNNNNGG 4 cut(s) 523, 542, 746, 965
BseMI GCAATG 1 cut(s) 855
BseMII CTCAG 2 cut(s) 333, 487
BseNI ACTGG 4 cut(s) 527, 600, 887, 1021
BseRI GAGGAG 3 cut(s) 359, 579, 945
BseSI GKGCMC 1 cut(s) 922
BseXI GCAGC 6 cut(s) 142, 145, 157, 748, 836, 982
BseYI CCCAGC 1 cut(s) 998
BsgI GTGCAG 1 cut(s) 741
Bsh1236I CGCG 1 cut(s) 975
BshFI GGCC 2 cut(s) 266, 516
BshNI GGYRCC 1 cut(s) 545
BsiHKAI GWGCWC 2 cut(s) 153, 474
BsiSI CCGG 1 cut(s) 517
BslI CCNNNNNNNGG 4 cut(s) 523, 542, 746, 965
BsmAI GTCTC 1 cut(s) 561
BsmI GAATGC 1 cut(s) 40
BsnI GGCC 2 cut(s) 266, 516
Bso31I GGTCTC 1 cut(s) 561
Bsp1286I GDGCHC 3 cut(s) 153, 474, 922
Bsp143I GATC 3 cut(s) 358, 532, 988
Bsp68I TCGCGA 1 cut(s) 975
BspACI CCGC 4 cut(s) 38, 183, 758, 884
BspANI GGCC 2 cut(s) 266, 516
BspCNI CTCAG 2 cut(s) 334, 486
BspFNI CGCG 1 cut(s) 975
BspHI TCATGA 1 cut(s) 682
BspLI GGNNCC 1 cut(s) 547
BspPI GGATC 2 cut(s) 527, 996
BspT107I GGYRCC 1 cut(s) 545
BspTNI GGTCTC 1 cut(s) 561
BsrBI CCGCTC 1 cut(s) 185
BsrDI GCAATG 1 cut(s) 855
BsrFI RCCGGY 1 cut(s) 516
BsrI ACTGG 4 cut(s) 527, 600, 887, 1021
BssAI RCCGGY 1 cut(s) 516
BssECI CCNNGG 1 cut(s) 645
BssMI GATC 3 cut(s) 358, 532, 988
BssNI GRCGYC 2 cut(s) 650, 798
Bst2UI CCWGG 3 cut(s) 626, 647, 905
Bst4CI ACNGT 5 cut(s) 262, 374, 431, 437, 545
Bst6I CTCTTC 1 cut(s) 97
BstACI GRCGYC 2 cut(s) 650, 798
BstC8I GCNNGC 3 cut(s) 153, 187, 518
BstDEI CTNAG 3 cut(s) 342, 473, 560
BstF5I GGATG 3 cut(s) 604, 751, 1070
BstFNI CGCG 1 cut(s) 975
BstH2I RGCGCY 1 cut(s) 215
BstHHI GCGC 1 cut(s) 214
BstKTI GATC 3 cut(s) 361, 535, 991
BstMAI GTCTC 1 cut(s) 561
BstMBI GATC 3 cut(s) 358, 532, 988
BstMWI GCNNNNNNNGC 4 cut(s) 167, 179, 766, 849
BstNI CCWGG 3 cut(s) 626, 647, 905
BstNSI RCATGY 1 cut(s) 773
BstSCI CCNGG 3 cut(s) 624, 645, 903
BstSLI GKGCMC 1 cut(s) 922
BstUI CGCG 1 cut(s) 975
BstV1I GCAGC 6 cut(s) 142, 145, 157, 748, 836, 982
BstV2I GAAGAC 1 cut(s) 801
BstX2I RGATCY 2 cut(s) 358, 532
BstYI RGATCY 2 cut(s) 358, 532
BsuRI GGCC 2 cut(s) 266, 516
BtsCI GGATG 3 cut(s) 604, 751, 1070
BtsIMutI CAGTG 6 cut(s) 267, 379, 436, 459, 520, 781
BtuMI TCGCGA 1 cut(s) 975
Cac8I GCNNGC 3 cut(s) 153, 187, 518
CciI TCATGA 1 cut(s) 682
CfoI GCGC 1 cut(s) 214
Cfr10I RCCGGY 1 cut(s) 516
CseI GACGC 2 cut(s) 639, 806
Csp6I GTAC 2 cut(s) 203, 546
CviAII CATG 4 cut(s) 683, 770, 839, 992
CviQI GTAC 2 cut(s) 203, 546
DdeI CTNAG 3 cut(s) 342, 473, 560
DpnI GATC 3 cut(s) 360, 534, 990
DpnII GATC 3 cut(s) 358, 532, 988
EaeI YGGCCR 2 cut(s) 264, 514
Eam1104I CTCTTC 1 cut(s) 97
EarI CTCTTC 1 cut(s) 97
Ecl136II GAGCTC 1 cut(s) 151
Eco24I GRGCYC 1 cut(s) 153
Eco31I GGTCTC 1 cut(s) 561
Eco32I GATATC 1 cut(s) 971
Eco53kI GAGCTC 1 cut(s) 151
Eco57I CTGAAG 3 cut(s) 483, 519, 813
EcoICRI GAGCTC 1 cut(s) 151
EcoRI GAATTC 1 cut(s) 1025
EcoRII CCWGG 3 cut(s) 624, 645, 903
EcoRV GATATC 1 cut(s) 971
EcoT38I GRGCYC 1 cut(s) 153
FaeI CATG 4 cut(s) 686, 773, 842, 995
FalI AAGNNNNNCTT 2 cut(s) 543, 575
FatI CATG 4 cut(s) 682, 769, 838, 991
Fnu4HI GCNGC 7 cut(s) 156, 159, 171, 183, 737, 825, 996
FokI GGATG 3 cut(s) 611, 758, 1077
FriOI GRGCYC 1 cut(s) 153
Fsp4HI GCNGC 7 cut(s) 156, 159, 171, 183, 737, 825, 996
FspBI CTAG 3 cut(s) 335, 389, 849
GlaI GCGC 1 cut(s) 213
GluI GCNGC 7 cut(s) 156, 159, 171, 183, 737, 825, 996
GsaI CCCAGC 1 cut(s) 1002
HaeII RGCGCY 1 cut(s) 215
HaeIII GGCC 2 cut(s) 266, 516
HapII CCGG 1 cut(s) 517
HgaI GACGC 2 cut(s) 639, 806
HhaI GCGC 1 cut(s) 214
Hin1I GRCGYC 2 cut(s) 650, 798
Hin1II CATG 4 cut(s) 686, 773, 842, 995
Hin6I GCGC 1 cut(s) 212
HinP1I GCGC 1 cut(s) 212
HinfI GANTC 6 cut(s) 323, 350, 446, 812, 873, 1043
HpaII CCGG 1 cut(s) 517
HphI GGTGA 3 cut(s) 52, 674, 747
Hpy166II GTNNAC 1 cut(s) 278
Hpy188I TCNGA 4 cut(s) 226, 322, 365, 499
Hpy188III TCNNGA 6 cut(s) 302, 354, 683, 791, 927, 974
Hpy8I GTNNAC 1 cut(s) 278
Hpy99I CGWCG 1 cut(s) 182
HpyAV CCTTC 5 cut(s) 139, 193, 327, 494, 596
HpyCH4III ACNGT 5 cut(s) 262, 374, 431, 437, 545
HpyCH4V TGCA 7 cut(s) 220, 710, 722, 736, 769, 838, 1005
HpyF10VI GCNNNNNNNGC 4 cut(s) 167, 179, 766, 849
HpyF3I CTNAG 3 cut(s) 342, 473, 560
Hsp92I GRCGYC 2 cut(s) 650, 798
Hsp92II CATG 4 cut(s) 686, 773, 842, 995
HspAI GCGC 1 cut(s) 212
KpnI GGTACC 1 cut(s) 549
KroI GCCGGC 1 cut(s) 516
KroNI GCCGGC 1 cut(s) 518
Kzo9I GATC 3 cut(s) 358, 532, 988
LmnI GCTCC 2 cut(s) 148, 938
Lsp1109I GCAGC 6 cut(s) 142, 145, 157, 748, 836, 982
LweI GCATC 1 cut(s) 405
MaeI CTAG 3 cut(s) 335, 389, 849
MaeIII GTNAC 3 cut(s) 256, 431, 1012
MalI GATC 3 cut(s) 360, 534, 990
MbiI CCGCTC 1 cut(s) 185
MboI GATC 3 cut(s) 358, 532, 988
MboII GAAGA 6 cut(s) 36, 84, 476, 806, 941, 1038
MflI RGATCY 2 cut(s) 358, 532
MhlI GDGCHC 3 cut(s) 153, 474, 922
MluCI AATT 9 cut(s) 10, 33, 120, 239, 451, 690, 894, 1025, 1054
MlyI GAGTC 2 cut(s) 821, 882
MmeI TCCRAC 1 cut(s) 120
MnlI CCTC 8 cut(s) 88, 184, 200, 337, 340, 557, 811, 923
MroNI GCCGGC 1 cut(s) 516
MroXI GAANNNNTTC 1 cut(s) 1029
MseI TTAA 2 cut(s) 411, 1053
MslI CAYNNNNRTG 1 cut(s) 774
MspI CCGG 1 cut(s) 517
MspR9I CCNGG 3 cut(s) 626, 647, 905
Mva1269I GAATGC 1 cut(s) 40
MvaI CCWGG 3 cut(s) 626, 647, 905
MvnI CGCG 1 cut(s) 975
MwoI GCNNNNNNNGC 4 cut(s) 167, 179, 766, 849
NaeI GCCGGC 1 cut(s) 518
NdeII GATC 3 cut(s) 358, 532, 988
NgoMIV GCCGGC 1 cut(s) 516
NlaIII CATG 4 cut(s) 686, 773, 842, 995
NlaIV GGNNCC 1 cut(s) 547
NmuCI GTSAC 2 cut(s) 256, 431
NruI TCGCGA 1 cut(s) 975
NspI RCATGY 1 cut(s) 773
PagI TCATGA 1 cut(s) 682
PctI GAATGC 1 cut(s) 40
PdiI GCCGGC 1 cut(s) 518
PdmI GAANNNNTTC 1 cut(s) 1029
PfeI GAWTC 4 cut(s) 323, 350, 446, 1043
PflMI CCANNNNNTGG 1 cut(s) 746
PkrI GCNGC 7 cut(s) 157, 160, 172, 184, 738, 826, 997
PleI GAGTC 2 cut(s) 820, 881
PpsI GAGTC 2 cut(s) 820, 881
Psp124BI GAGCTC 1 cut(s) 153
Psp6I CCWGG 3 cut(s) 624, 645, 903
PspFI CCCAGC 1 cut(s) 998
PspGI CCWGG 3 cut(s) 624, 645, 903
PspN4I GGNNCC 1 cut(s) 547
PsuI RGATCY 2 cut(s) 358, 532
RruI TCGCGA 1 cut(s) 975
RsaI GTAC 2 cut(s) 204, 547
RsaNI GTAC 2 cut(s) 203, 546
RseI CAYNNNNRTG 1 cut(s) 774
SacI GAGCTC 1 cut(s) 153
SaqAI TTAA 2 cut(s) 411, 1053
SatI GCNGC 7 cut(s) 156, 159, 171, 183, 737, 825, 996
Sau3AI GATC 3 cut(s) 358, 532, 988
SchI GAGTC 2 cut(s) 821, 882
ScrFI CCNGG 3 cut(s) 626, 647, 905
SduI GDGCHC 3 cut(s) 153, 474, 922
SetI ASST 9 cut(s) 68, 80, 130, 153, 172, 204, 343, 505, 768
SfaNI GCATC 1 cut(s) 405
SmiMI CAYNNNNRTG 1 cut(s) 774
SmlI CTYRAG 1 cut(s) 16
SmoI CTYRAG 1 cut(s) 16
Sse9I AATT 9 cut(s) 10, 33, 120, 239, 451, 690, 894, 1025, 1054
SsiI CCGC 4 cut(s) 38, 183, 758, 884
SspMI CTAG 3 cut(s) 335, 389, 849
SstI GAGCTC 1 cut(s) 153
StyD4I CCNGG 3 cut(s) 624, 645, 903
TaaI ACNGT 5 cut(s) 262, 374, 431, 437, 545
TaqI TCGA 2 cut(s) 124, 1041
TasI AATT 9 cut(s) 10, 33, 120, 239, 451, 690, 894, 1025, 1054
TauI GCSGC 1 cut(s) 185
TfiI GAWTC 4 cut(s) 323, 350, 446, 1043
Tru1I TTAA 2 cut(s) 411, 1053
Tru9I TTAA 2 cut(s) 411, 1053
TscAI CASTG 6 cut(s) 267, 379, 436, 466, 527, 781
TseFI GTSAC 2 cut(s) 256, 431
TseI GCWGC 6 cut(s) 155, 158, 170, 736, 824, 995
Tsp45I GTSAC 2 cut(s) 256, 431
TspDTI ATGAA 5 cut(s) 105, 221, 615, 741, 834
TspGWI ACGGA 1 cut(s) 166
TspRI CASTG 6 cut(s) 267, 379, 436, 466, 527, 781
Van91I CCANNNNNTGG 1 cut(s) 746
XapI RAATTY 2 cut(s) 33, 1025
XceI RCATGY 1 cut(s) 773
XcmI CCANNNNNNNNNTGG 1 cut(s) 911
XmnI GAANNNNTTC 1 cut(s) 1029
XspI CTAG 3 cut(s) 335, 389, 849
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.