Rh2DG315700

SAL1 phosphatase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0008514
Physical Location & Seq
Forward (+)
39090644 .. 39095115
4472 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG315700.1

Sequence Viewer

Length: 1065 bp
ATGTCTTACGAGGAGGAGCTCGCTGCTGCCAAGAAAGCTGCCTCCGTCGCCGCTCGCCTCTGCCAGAAGGTACAACAGGCGCTTTTGCAGTCAGATGTTCATTCAAAATCAGATAAAAGTCCTGTCACAGTGGCCGATTATGGTTTGTTTACAAACTCTGCTGCTCTTGTTAGTTTTGTTCTGGAAAGGGAACTTCCTTCCGAATCATTCTCTCTAGTAGCTGAGGAGGATTCGGTAGATCTTCGAATAGACAGTGGCAGGGAAACACTAGAACGCATCACAAAACTTGTTAATGATACTCTTGCCAACAGTGACAGTTATAGTGATTCTAATTTGACCACTGAAGATGTGCTCAGGGCTATTGACAATGGCAAATCTGAAGGTGGTTCTTGTGGCCGGCACTGGGTTTTAGATCCCATTGACGGTACCAAAGGGTTTCTTAGAGGAGACCAATATGCCATAGCATTAGCATTACTGGATGAAGGAAAAGTTGTGTTGGGTGTCCTGGCTTGTCCAAATCTCCCCCTGGCGTCCATTAGCGGTGATAATCAGCATTCTTCTCATGATAAAATTGGTTGCCTTTTCTTTGCAAAACTTGGTGCAGGAACATATATGCAGCCATTGGATGGTTCATCACCGCTAAAGGTGCATGTCAGTGCTACTGAAAATCCTGAAGACGCCTCATTGTTTGAGTCTTATGAAGCAGCACACTCGTTGCACAGCTTGTCTAGCACCATTGCCAAGAAACTTGGAGTCAAAGCACCGCCAGTTAGAATTGACAGCCAGGCAAAGTATGGGGCACTTTCCAGAGGAGATGGAGCAATATATCTTCGTTTCCCCCATAAAGGATATCGCGAGAAAATATGGGATCATGCTGCTGGGTGCATTGTTGTTACTGAAGCTGGTGGTGTAGTCACAGATGCTGCAGGAAATCCATTGGACTTTTCAAAAGGGAGGTATCTGGATCTTGTAACAGGCATAATTGTTACCAACCAGAAATTGATGCCATCACTCTTGAAGGCAGTTAAAGAATCCTTGGAGGAAGAGAAAGTTTCATCTTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00562 ko00920 ko01100 ko01120 ko04070 map00562 map00920 map01100 map01120 map04070
Pfam Domains
Protein Families
Inositol_P

Protein Analysis

354

Amino Acids

37.9

Weight (kDa)

5.27

Isoelectric Point (pI)

34.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Inositol_P PF00459 55 - 345 1e-46 Inositol monophosphatase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 425
AccB1I GGYRCC 1 cut(s) 425
AccB7I CCANNNNNTGG 1 cut(s) 626
AccBSI CCGCTC 1 cut(s) 53
AccII CGCG 1 cut(s) 855
AciI CCGC 4 cut(s) 51, 540, 638, 764
AclWI GGATC 3 cut(s) 407, 876, 972
AcoI YGGCCR 2 cut(s) 132, 394
AcuI CTGAAG 4 cut(s) 363, 399, 693, 918
AcyI GRCGYC 2 cut(s) 530, 678
AfaI GTAC 2 cut(s) 72, 427
AfiI CCNNNNNNNGG 4 cut(s) 403, 422, 626, 845
AgsI TTSAA 3 cut(s) 105, 948, 1018
AjnI CCWGG 3 cut(s) 504, 525, 783
AluBI AGCT 5 cut(s) 19, 38, 221, 723, 902
AluI AGCT 5 cut(s) 19, 38, 221, 723, 902
Alw21I GWGCWC 2 cut(s) 21, 354
Alw26I GTCTC 1 cut(s) 441
AlwI GGATC 3 cut(s) 407, 876, 972
AlwNI CAGNNNCTG 1 cut(s) 923
AoxI GGCC 2 cut(s) 132, 394
ApeKI GCWGC 8 cut(s) 23, 26, 38, 161, 616, 704, 875, 923
Asp718I GGTACC 1 cut(s) 425
AspLEI GCGC 1 cut(s) 82
AsuHPI GGTGA 2 cut(s) 554, 627
AsuII TTCGAA 1 cut(s) 244
BaeGI GKGCMC 1 cut(s) 802
BanI GGYRCC 1 cut(s) 425
BanII GRGCYC 1 cut(s) 21
BbsI GAAGAC 1 cut(s) 681
Bbv12I GWGCWC 2 cut(s) 21, 354
BbvCI CCTCAGC 1 cut(s) 222
BbvI GCAGC 8 cut(s) 10, 13, 25, 148, 628, 716, 862, 910
BccI CCATC 3 cut(s) 620, 809, 1015
BcgI CGANNNNNNTGC 2 cut(s) 693, 727
BciT130I CCWGG 3 cut(s) 506, 527, 785
BcoDI GTCTC 1 cut(s) 441
BfaI CTAG 3 cut(s) 215, 269, 729
BfmI CTRYAG 1 cut(s) 924
BfoI RGCGCY 1 cut(s) 83
BglII AGATCT 1 cut(s) 238
BisI GCNGC 9 cut(s) 24, 27, 39, 51, 162, 617, 705, 876, 924
BlsI GCNGC 9 cut(s) 25, 28, 40, 52, 163, 618, 706, 877, 925
Bme1390I CCNGG 3 cut(s) 506, 527, 785
BmiI GGNNCC 1 cut(s) 427
BmrFI CCNGG 3 cut(s) 506, 527, 785
BmrI ACTGGG 1 cut(s) 412
BmsI GCATC 3 cut(s) 285, 910, 993
BmuI ACTGGG 1 cut(s) 412
BpiI GAAGAC 1 cut(s) 681
Bpu10I CCTNAGC 2 cut(s) 222, 353
Bpu14I TTCGAA 1 cut(s) 244
BsaHI GRCGYC 2 cut(s) 530, 678
BsaI GGTCTC 1 cut(s) 441
BsaJI CCNNGG 2 cut(s) 525, 1035
Bsc4I CCNNNNNNNGG 4 cut(s) 403, 422, 626, 845
Bse118I RCCGGY 1 cut(s) 396
Bse1I ACTGG 3 cut(s) 407, 480, 767
Bse3DI GCAATG 1 cut(s) 735
BseBI CCWGG 3 cut(s) 506, 527, 785
BseDI CCNNGG 2 cut(s) 525, 1035
BseGI GGATG 2 cut(s) 484, 631
BseLI CCNNNNNNNGG 4 cut(s) 403, 422, 626, 845
BseMI GCAATG 1 cut(s) 735
BseMII CTCAG 2 cut(s) 213, 367
BseNI ACTGG 3 cut(s) 407, 480, 767
BseRI GAGGAG 5 cut(s) 26, 29, 239, 459, 825
BseSI GKGCMC 1 cut(s) 802
BseXI GCAGC 8 cut(s) 10, 13, 25, 148, 628, 716, 862, 910
BseYI CCCAGC 1 cut(s) 878
BsgI GTGCAG 1 cut(s) 621
Bsh1236I CGCG 1 cut(s) 855
BshFI GGCC 2 cut(s) 134, 396
BshNI GGYRCC 1 cut(s) 425
BsiHKAI GWGCWC 2 cut(s) 21, 354
BsiSI CCGG 1 cut(s) 397
BslI CCNNNNNNNGG 4 cut(s) 403, 422, 626, 845
BsmAI GTCTC 1 cut(s) 441
BsmI GAATGC 1 cut(s) 553
BsnI GGCC 2 cut(s) 134, 396
Bso31I GGTCTC 1 cut(s) 441
Bsp119I TTCGAA 1 cut(s) 244
Bsp1286I GDGCHC 3 cut(s) 21, 354, 802
Bsp143I GATC 4 cut(s) 238, 412, 868, 964
Bsp68I TCGCGA 1 cut(s) 855
BspACI CCGC 4 cut(s) 51, 540, 638, 764
BspANI GGCC 2 cut(s) 134, 396
BspCNI CTCAG 2 cut(s) 214, 366
BspFNI CGCG 1 cut(s) 855
BspHI TCATGA 1 cut(s) 562
BspLI GGNNCC 1 cut(s) 427
BspMAI CTGCAG 1 cut(s) 928
BspPI GGATC 3 cut(s) 407, 876, 972
BspT104I TTCGAA 1 cut(s) 244
BspT107I GGYRCC 1 cut(s) 425
BspTNI GGTCTC 1 cut(s) 441
BsrBI CCGCTC 1 cut(s) 53
BsrDI GCAATG 1 cut(s) 735
BsrFI RCCGGY 1 cut(s) 396
BsrI ACTGG 3 cut(s) 407, 480, 767
BssAI RCCGGY 1 cut(s) 396
BssECI CCNNGG 2 cut(s) 525, 1035
BssMI GATC 4 cut(s) 238, 412, 868, 964
BssNI GRCGYC 2 cut(s) 530, 678
BssT1I CCWWGG 1 cut(s) 1035
Bst2UI CCWGG 3 cut(s) 506, 527, 785
Bst4CI ACNGT 5 cut(s) 130, 254, 311, 317, 425
Bst6I CTCTTC 1 cut(s) 1038
BstACI GRCGYC 2 cut(s) 530, 678
BstBI TTCGAA 1 cut(s) 244
BstC8I GCNNGC 3 cut(s) 21, 55, 398
BstDEI CTNAG 3 cut(s) 222, 353, 440
BstF5I GGATG 2 cut(s) 484, 631
BstFNI CGCG 1 cut(s) 855
BstH2I RGCGCY 1 cut(s) 83
BstHHI GCGC 1 cut(s) 82
BstKTI GATC 4 cut(s) 241, 415, 871, 967
BstMAI GTCTC 1 cut(s) 441
BstMBI GATC 4 cut(s) 238, 412, 868, 964
BstMWI GCNNNNNNNGC 4 cut(s) 35, 47, 646, 729
BstNI CCWGG 3 cut(s) 506, 527, 785
BstNSI RCATGY 1 cut(s) 653
BstSCI CCNGG 3 cut(s) 504, 525, 783
BstSFI CTRYAG 1 cut(s) 924
BstSLI GKGCMC 1 cut(s) 802
BstUI CGCG 1 cut(s) 855
BstV1I GCAGC 8 cut(s) 10, 13, 25, 148, 628, 716, 862, 910
BstV2I GAAGAC 1 cut(s) 681
BstX2I RGATCY 3 cut(s) 238, 412, 964
BstYI RGATCY 3 cut(s) 238, 412, 964
BsuRI GGCC 2 cut(s) 134, 396
BtsCI GGATG 2 cut(s) 484, 631
BtsIMutI CAGTG 6 cut(s) 135, 259, 316, 339, 400, 661
BtuMI TCGCGA 1 cut(s) 855
Cac8I GCNNGC 3 cut(s) 21, 55, 398
CaiI CAGNNNCTG 1 cut(s) 923
CciI TCATGA 1 cut(s) 562
CfoI GCGC 1 cut(s) 82
Cfr10I RCCGGY 1 cut(s) 396
CseI GACGC 2 cut(s) 519, 686
Csp6I GTAC 2 cut(s) 71, 426
CviAII CATG 3 cut(s) 563, 650, 872
CviQI GTAC 2 cut(s) 71, 426
DdeI CTNAG 3 cut(s) 222, 353, 440
DpnI GATC 4 cut(s) 240, 414, 870, 966
DpnII GATC 4 cut(s) 238, 412, 868, 964
EaeI YGGCCR 2 cut(s) 132, 394
Eam1104I CTCTTC 1 cut(s) 1038
EarI CTCTTC 1 cut(s) 1038
Ecl136II GAGCTC 1 cut(s) 19
Eco130I CCWWGG 1 cut(s) 1035
Eco24I GRGCYC 1 cut(s) 21
Eco31I GGTCTC 1 cut(s) 441
Eco32I GATATC 1 cut(s) 851
Eco53kI GAGCTC 1 cut(s) 19
Eco57I CTGAAG 4 cut(s) 363, 399, 693, 918
EcoICRI GAGCTC 1 cut(s) 19
EcoRII CCWGG 3 cut(s) 504, 525, 783
EcoRV GATATC 1 cut(s) 851
EcoT14I CCWWGG 1 cut(s) 1035
EcoT38I GRGCYC 1 cut(s) 21
ErhI CCWWGG 1 cut(s) 1035
FaeI CATG 3 cut(s) 566, 653, 875
FalI AAGNNNNNCTT 2 cut(s) 423, 455
FatI CATG 3 cut(s) 562, 649, 871
Fnu4HI GCNGC 9 cut(s) 24, 27, 39, 51, 162, 617, 705, 876, 924
FokI GGATG 2 cut(s) 491, 638
FriOI GRGCYC 1 cut(s) 21
Fsp4HI GCNGC 9 cut(s) 24, 27, 39, 51, 162, 617, 705, 876, 924
FspBI CTAG 3 cut(s) 215, 269, 729
GlaI GCGC 1 cut(s) 81
GluI GCNGC 9 cut(s) 24, 27, 39, 51, 162, 617, 705, 876, 924
GsaI CCCAGC 1 cut(s) 882
HaeII RGCGCY 1 cut(s) 83
HaeIII GGCC 2 cut(s) 134, 396
HapII CCGG 1 cut(s) 397
HgaI GACGC 2 cut(s) 519, 686
HhaI GCGC 1 cut(s) 82
Hin1I GRCGYC 2 cut(s) 530, 678
Hin1II CATG 3 cut(s) 566, 653, 875
Hin6I GCGC 1 cut(s) 80
HinP1I GCGC 1 cut(s) 80
HinfI GANTC 6 cut(s) 203, 230, 326, 692, 753, 1031
HpaII CCGG 1 cut(s) 397
HphI GGTGA 2 cut(s) 554, 627
Hpy166II GTNNAC 1 cut(s) 150
Hpy188I TCNGA 4 cut(s) 94, 112, 202, 379
Hpy188III TCNNGA 7 cut(s) 182, 563, 671, 807, 854, 962, 1015
Hpy8I GTNNAC 1 cut(s) 150
Hpy99I CGWCG 1 cut(s) 50
HpyAV CCTTC 5 cut(s) 61, 207, 374, 476, 1012
HpyCH4III ACNGT 5 cut(s) 130, 254, 311, 317, 425
HpyCH4V TGCA 8 cut(s) 88, 590, 602, 616, 649, 718, 885, 926
HpyF10VI GCNNNNNNNGC 4 cut(s) 35, 47, 646, 729
HpyF3I CTNAG 3 cut(s) 222, 353, 440
Hsp92I GRCGYC 2 cut(s) 530, 678
Hsp92II CATG 3 cut(s) 566, 653, 875
HspAI GCGC 1 cut(s) 80
KpnI GGTACC 1 cut(s) 429
KroI GCCGGC 1 cut(s) 396
KroNI GCCGGC 1 cut(s) 398
Kzo9I GATC 4 cut(s) 238, 412, 868, 964
LmnI GCTCC 2 cut(s) 16, 818
Lsp1109I GCAGC 8 cut(s) 10, 13, 25, 148, 628, 716, 862, 910
LweI GCATC 3 cut(s) 285, 910, 993
MaeI CTAG 3 cut(s) 215, 269, 729
MaeIII GTNAC 6 cut(s) 124, 311, 892, 913, 970, 985
MalI GATC 4 cut(s) 240, 414, 870, 966
MbiI CCGCTC 1 cut(s) 53
MboI GATC 4 cut(s) 238, 412, 868, 964
MboII GAAGA 6 cut(s) 233, 356, 549, 686, 821, 1055
MflI RGATCY 3 cut(s) 238, 412, 964
MhlI GDGCHC 3 cut(s) 21, 354, 802
MluCI AATT 5 cut(s) 331, 570, 774, 981, 998
MlyI GAGTC 2 cut(s) 701, 762
MroNI GCCGGC 1 cut(s) 396
MseI TTAA 2 cut(s) 291, 1026
MslI CAYNNNNRTG 2 cut(s) 654, 1060
MspI CCGG 1 cut(s) 397
MspR9I CCNGG 3 cut(s) 506, 527, 785
Mva1269I GAATGC 1 cut(s) 553
MvaI CCWGG 3 cut(s) 506, 527, 785
MvnI CGCG 1 cut(s) 855
MwoI GCNNNNNNNGC 4 cut(s) 35, 47, 646, 729
NaeI GCCGGC 1 cut(s) 398
NdeII GATC 4 cut(s) 238, 412, 868, 964
NgoMIV GCCGGC 1 cut(s) 396
NlaIII CATG 3 cut(s) 566, 653, 875
NlaIV GGNNCC 1 cut(s) 427
NmuCI GTSAC 3 cut(s) 124, 311, 913
NruI TCGCGA 1 cut(s) 855
NspI RCATGY 1 cut(s) 653
NspV TTCGAA 1 cut(s) 244
PagI TCATGA 1 cut(s) 562
PctI GAATGC 1 cut(s) 553
PdiI GCCGGC 1 cut(s) 398
PfeI GAWTC 4 cut(s) 203, 230, 326, 1031
PflMI CCANNNNNTGG 1 cut(s) 626
PkrI GCNGC 9 cut(s) 25, 28, 40, 52, 163, 618, 706, 877, 925
PleI GAGTC 2 cut(s) 700, 761
PpsI GAGTC 2 cut(s) 700, 761
Psp124BI GAGCTC 1 cut(s) 21
Psp6I CCWGG 3 cut(s) 504, 525, 783
PspFI CCCAGC 1 cut(s) 878
PspGI CCWGG 3 cut(s) 504, 525, 783
PspN4I GGNNCC 1 cut(s) 427
PstI CTGCAG 1 cut(s) 928
PstNI CAGNNNCTG 1 cut(s) 923
PsuI RGATCY 3 cut(s) 238, 412, 964
RruI TCGCGA 1 cut(s) 855
RsaI GTAC 2 cut(s) 72, 427
RsaNI GTAC 2 cut(s) 71, 426
RseI CAYNNNNRTG 2 cut(s) 654, 1060
SacI GAGCTC 1 cut(s) 21
SaqAI TTAA 2 cut(s) 291, 1026
SatI GCNGC 9 cut(s) 24, 27, 39, 51, 162, 617, 705, 876, 924
Sau3AI GATC 4 cut(s) 238, 412, 868, 964
SchI GAGTC 2 cut(s) 701, 762
ScrFI CCNGG 3 cut(s) 506, 527, 785
SduI GDGCHC 3 cut(s) 21, 354, 802
SetI ASST 9 cut(s) 21, 40, 72, 223, 385, 648, 725, 904, 959
SfaNI GCATC 3 cut(s) 285, 910, 993
SfcI CTRYAG 1 cut(s) 924
SfuI TTCGAA 1 cut(s) 244
SmiMI CAYNNNNRTG 2 cut(s) 654, 1060
Sse9I AATT 5 cut(s) 331, 570, 774, 981, 998
SsiI CCGC 4 cut(s) 51, 540, 638, 764
SspMI CTAG 3 cut(s) 215, 269, 729
SstI GAGCTC 1 cut(s) 21
StyD4I CCNGG 3 cut(s) 504, 525, 783
StyI CCWWGG 1 cut(s) 1035
TaaI ACNGT 5 cut(s) 130, 254, 311, 317, 425
TaqI TCGA 1 cut(s) 244
TasI AATT 5 cut(s) 331, 570, 774, 981, 998
TauI GCSGC 1 cut(s) 53
TfiI GAWTC 4 cut(s) 203, 230, 326, 1031
Tru1I TTAA 2 cut(s) 291, 1026
Tru9I TTAA 2 cut(s) 291, 1026
TscAI CASTG 6 cut(s) 135, 259, 316, 346, 407, 661
TseFI GTSAC 3 cut(s) 124, 311, 913
TseI GCWGC 8 cut(s) 23, 26, 38, 161, 616, 704, 875, 923
Tsp45I GTSAC 3 cut(s) 124, 311, 913
TspDTI ATGAA 5 cut(s) 89, 495, 621, 714, 1044
TspGWI ACGGA 1 cut(s) 34
TspRI CASTG 6 cut(s) 135, 259, 316, 346, 407, 661
Van91I CCANNNNNTGG 1 cut(s) 626
XceI RCATGY 1 cut(s) 653
XcmI CCANNNNNNNNNTGG 1 cut(s) 791
XspI CTAG 3 cut(s) 215, 269, 729
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.