Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0006719

Physical Location & Seq

Genomic Coordinates Reverse (-)

26617399 .. 26620704

Gene Structure 3306 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G66680.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1314 bp

ATGGTGAACCTCTCGAGATCCGTCGCGTTGATCTCTGTATTCCTCCTTCCTTTACTTAGCTTCTCTTTCTCCGTCGATAATCCGACGGATCGGCGTGTTCTTGTTCTTCTCGATGATTTATCACTCAAATCCTCTCATTCTATCTTCTTCAACACTCTCAAGTCTCGTGGATTCGATCTCGATTTCAAGTTAGCTGAAGATTCGAAGCTTGCGCTTCAACGATACGGCCAGTACTTGTACGATGGGTTGATCATCTTCGCCCCATCAACAGAACGGTTTGGAGGATCCTTGGATTCGAAATCCATTGCTGATTTTGTTGATTCCGGTCGTGACTTGATCTTATCGGCGGATACTGCTGCATCTGATTTGATTAGGGGTATTGCCACAGAGTGTGGGGTTGATTTCGATGAGGATTCTTCAGCTATGGTTATTGATCATACTAGCTTCTCCGTCTCTGATGTTGACGGCGACCACACCTTGATTGCTGCCGACGATTTAGTGAAATCCGATGTCATTTTGGGAAAAACCAAGATTGAGGCTCCCGTGCTCTTCAGAGGAGTTGCACATTCGTTGAACCCTACTAACAATCTGGTTTTGAAAGTTCTTTCAGCCTCTCCATCAGCTTATTCTGCTAACCCAAGCTCGAAGTTGTCTAGTCCCCCCCAGCTCACTGGGTCTTCAATTTCGCTAGTCTCGGTCATGCAGGCCAGGAACAATGCTAGGGTTGTGATCTCAGGCTCAGTGCAGTTGTTTAGCGATAGGTTAATCAGATCTGGTGTCCAGAAAGCAGGGAGTCCGAACCAATACGAAAAATCTGGCAACGAACAGTTTGTGACTGAACTAAGCAAATGGGTCTTCCACGAAAGGGGCCATCTGAAGGCTGGTAATCTTGTACACCATAGGGTTGGAGAAACAGATGAGCCAGCTATATATAGGATAAAGGATGACCTGGAATTTTCTGTAGAGATATATGAGTGGTCAGGAAAGAGCTGGGAGCCGTATGTTGCTAACGATGTGCAGGTTCAGTTTTACATGATGAGCCCGTATGTGTTGAAAACCCTGTCAACAGACAAGAAGGGTCTGTTTCATACATCTTTCAAGGTTCCTGATGTCTACGGTGTATTCCAGTTTAAGGTTGAATATGAAAAGCTAGGCTACACTACATTATCTCTTTCGAAGCAGATTCCGGTGCGGCCTTACAGACACAATGAGTATGAGAGATTTATCCCAACTGCGTATCCTTATTATGGAGCCTGCTTTACGACGATGGCTGGTTTCTTCGTCTTCAGCTTCGTCTACCTCTACCATAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005773 GO:0005774 GO:0005783 GO:0005789 GO:0005794 GO:0005886 GO:0005911 GO:0006464 GO:0006486 GO:0006487 GO:0006807 GO:0008150 GO:0008152 GO:0008250 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009505 GO:0009506 GO:0009653 GO:0009664 GO:0009826 GO:0009987 GO:0012505 GO:0016020 GO:0016043 GO:0016049 GO:0018193 GO:0018196 GO:0018279 GO:0019538 GO:0030054 GO:0030312 GO:0031090 GO:0031974 GO:0031981 GO:0031984 GO:0032502 GO:0032989 GO:0032991 GO:0034645 GO:0036211 GO:0040007 GO:0042175 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043413 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044428 GO:0044432 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045229 GO:0048589 GO:0048856 GO:0048869 GO:0055044 GO:0060560 GO:0070013 GO:0070085 GO:0071554 GO:0071555 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:0098588 GO:0098796 GO:0098805 GO:0098827 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00510 ko00513 ko01100 ko04141 map00510 map00513 map01100 map04141

Pfam Domains

Protein Families

DDOST_48kD

Protein Analysis

437

Amino Acids

48.74

Weight (kDa)

5.9

Isoelectric Point (pI)

27.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
OST48_N	PF03345	32 - 285	2.6e-69	OST48, N-terminal domain
OST48_MD	PF23358	299 - 437	1.6e-48	OST48 middle domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006719)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G66680
fragaria_vesca	FvH4_2g08200 FvH4_2g08200 FvH4_2g08200
malus_domestica	MD05G1070400.v1.1 MD10G1081300.v1.1 MD15G1269000.v1.1
prunus_persica	Prupe.7G148700_v2.0.a1 Prupe.7G148700_v2.0.a1 Prupe.7G148700_v2.0.a1 Prupe.7G148700_v2.0.a1 Prupe.7G148700_v2.0.a1 Prupe.8G102600_v2.0.a1
pyrus_communis	pycom05g06060 pycom10g06430 pycom15g23350
rosa_chinensis	RchiOBHm_Chr6g0262991
rosa_laevigata	RLG00000014386
rosa_multiflora	Rmu_sc0000596.1_g000071
rosa_roxburghii	Rroxscaffold_7G00204800
rosa_rugosa	Rorug06G0002700
rosa_samantha	Rh6AG121400 Rh6BG115000 Rh6CG113500 Rh6DG102800
rosa_wichuraiana	Rw6G010430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1009
AccI	GTMKAC	2 cut(s)	1113, 1296
AccII	CGCG	1 cut(s)	26
AciI	CCGC	2 cut(s)	347, 1192
AclWI	GGATC	4 cut(s)	12, 96, 279, 292
AcoI	YGGCCR	1 cut(s)	226
AcsI	RAATTY	1 cut(s)	953
AcuI	CTGAAG	5 cut(s)	216, 402, 535, 896, 1270
AdeI	CACNNNGTG	1 cut(s)	390
AfaI	GTAC	3 cut(s)	233, 239, 894
AfiI	CCNNNNNNNGG	4 cut(s)	865, 877, 1132, 1247
AgsI	TTSAA	9 cut(s)	151, 187, 218, 574, 598, 681, 1054, 1099, 1139
AjnI	CCWGG	2 cut(s)	707, 948
Alw21I	GWGCWC	1 cut(s)	549
Alw26I	GTCTC	3 cut(s)	168, 457, 697
AlwI	GGATC	4 cut(s)	12, 96, 279, 292
Ama87I	CYCGRG	1 cut(s)	13
AoxI	GGCC	4 cut(s)	226, 705, 868, 1193
ApeKI	GCWGC	2 cut(s)	356, 485
ApoI	RAATTY	1 cut(s)	953
AspLEI	GCGC	1 cut(s)	214
AspS9I	GGNCC	1 cut(s)	868
AsuHPI	GGTGA	1 cut(s)	16
AsuII	TTCGAA	3 cut(s)	203, 296, 1175
AvaI	CYCGRG	1 cut(s)	13
BamHI	GGATCC	1 cut(s)	284
BanII	GRGCYC	1 cut(s)	1043
BarI	GAAGNNNNNNTAC	2 cut(s)	30, 62
BauI	CACGAG	1 cut(s)	165
BbsI	GAAGAC	3 cut(s)	669, 847, 1276
Bbv12I	GWGCWC	1 cut(s)	549
BbvI	GCAGC	2 cut(s)	343, 472
BccI	CCATC	5 cut(s)	236, 271, 625, 879, 1261
BceAI	ACGGC	3 cut(s)	241, 481, 982
BciT130I	CCWGG	2 cut(s)	709, 950
BciVI	GTATCC	2 cut(s)	343, 1248
BclI	TGATCA	2 cut(s)	249, 433
BcoDI	GTCTC	3 cut(s)	168, 457, 697
BfaI	CTAG	5 cut(s)	441, 654, 689, 720, 1151
BfmI	CTRYAG	1 cut(s)	960
BfuAI	ACCTGC	1 cut(s)	1009
BfuI	GTATCC	2 cut(s)	343, 1248
BglII	AGATCT	1 cut(s)	770
BisI	GCNGC	3 cut(s)	357, 486, 1193
BlsI	GCNGC	3 cut(s)	358, 487, 1194
BmcAI	AGTACT	1 cut(s)	233
Bme1390I	CCNGG	2 cut(s)	709, 950
BmeT110I	CYCGRG	1 cut(s)	13
BmgT120I	GGNCC	1 cut(s)	868
BmiI	GGNNCC	6 cut(s)	286, 540, 869, 996, 1104, 1252
BmrFI	CCNGG	2 cut(s)	709, 950
BmrI	ACTGGG	1 cut(s)	681
BmsI	GCATC	1 cut(s)	368
BmuI	ACTGGG	1 cut(s)	681
BpiI	GAAGAC	3 cut(s)	669, 847, 1276
Bpu14I	TTCGAA	3 cut(s)	203, 296, 1175
BpuEI	CTTGAG	1 cut(s)	143
BsaJI	CCNNGG	1 cut(s)	288
BsaWI	WCCGGW	2 cut(s)	323, 1186
Bsc4I	CCNNNNNNNGG	4 cut(s)	865, 877, 1132, 1247
Bse1I	ACTGG	3 cut(s)	229, 676, 1126
Bse3DI	GCAATG	1 cut(s)	303
BseBI	CCWGG	2 cut(s)	709, 950
BseDI	CCNNGG	1 cut(s)	288
BseGI	GGATG	1 cut(s)	949
BseLI	CCNNNNNNNGG	4 cut(s)	865, 877, 1132, 1247
BseMI	GCAATG	1 cut(s)	303
BseMII	CTCAG	2 cut(s)	747, 753
BseNI	ACTGG	3 cut(s)	229, 676, 1126
BseRI	GAGGAG	1 cut(s)	570
BseXI	GCAGC	2 cut(s)	343, 472
BseYI	CCCAGC	2 cut(s)	663, 990
BsgI	GTGCAG	2 cut(s)	764, 1037
Bsh1236I	CGCG	1 cut(s)	26
Bsh1285I	CGRYCG	1 cut(s)	328
BshFI	GGCC	4 cut(s)	228, 707, 870, 1195
BsiEI	CGRYCG	1 cut(s)	328
BsiHKAI	GWGCWC	1 cut(s)	549
BsiHKCI	CYCGRG	1 cut(s)	13
BsiSI	CCGG	2 cut(s)	324, 1187
BslFI	GGGAC	1 cut(s)	642
BslI	CCNNNNNNNGG	4 cut(s)	865, 877, 1132, 1247
BsmAI	GTCTC	3 cut(s)	168, 457, 697
BsmBI	CGTCTC	1 cut(s)	457
BsmFI	GGGAC	1 cut(s)	642
BsnI	GGCC	4 cut(s)	228, 707, 870, 1195
BsoBI	CYCGRG	1 cut(s)	13
Bsp119I	TTCGAA	3 cut(s)	203, 296, 1175
Bsp1286I	GDGCHC	2 cut(s)	549, 1043
Bsp1407I	TGTACA	1 cut(s)	892
BspACI	CCGC	2 cut(s)	347, 1192
BspANI	GGCC	4 cut(s)	228, 707, 870, 1195
BspCNI	CTCAG	2 cut(s)	746, 752
BspFNI	CGCG	1 cut(s)	26
BspLI	GGNNCC	6 cut(s)	286, 540, 869, 996, 1104, 1252
BspMI	ACCTGC	1 cut(s)	1009
BspPI	GGATC	4 cut(s)	12, 96, 279, 292
BspQI	GCTCTTC	1 cut(s)	554
BspT104I	TTCGAA	3 cut(s)	203, 296, 1175
BsrDI	GCAATG	1 cut(s)	303
BsrGI	TGTACA	1 cut(s)	892
BsrI	ACTGG	3 cut(s)	229, 676, 1126
BssECI	CCNNGG	1 cut(s)	288
BssSI	CACGAG	1 cut(s)	165
BssT1I	CCWWGG	1 cut(s)	288
Bst2BI	CACGAG	1 cut(s)	165
Bst2UI	CCWGG	2 cut(s)	709, 950
Bst4CI	ACNGT	3 cut(s)	276, 828, 1118
Bst6I	CTCTTC	1 cut(s)	554
BstAUI	TGTACA	1 cut(s)	892
BstBI	TTCGAA	3 cut(s)	203, 296, 1175
BstC8I	GCNNGC	4 cut(s)	210, 705, 924, 1255
BstDEI	CTNAG	4 cut(s)	56, 733, 739, 842
BstF5I	GGATG	1 cut(s)	949
BstFNI	CGCG	1 cut(s)	26
BstHHI	GCGC	1 cut(s)	214
BstMAI	GTCTC	3 cut(s)	168, 457, 697
BstMCI	CGRYCG	1 cut(s)	328
BstMWI	GCNNNNNNNGC	2 cut(s)	353, 629
BstNI	CCWGG	2 cut(s)	709, 950
BstSCI	CCNGG	2 cut(s)	707, 948
BstSFI	CTRYAG	1 cut(s)	960
BstUI	CGCG	1 cut(s)	26
BstV1I	GCAGC	2 cut(s)	343, 472
BstV2I	GAAGAC	3 cut(s)	669, 847, 1276
BstX2I	RGATCY	3 cut(s)	17, 284, 770
BstXI	CCANNNNNNTGG	2 cut(s)	671, 905
BstYI	RGATCY	3 cut(s)	17, 284, 770
BsuI	GTATCC	2 cut(s)	343, 1248
BsuRI	GGCC	4 cut(s)	228, 707, 870, 1195
BtsCI	GGATG	1 cut(s)	949
BtsIMutI	CAGTG	2 cut(s)	669, 747
BveI	ACCTGC	1 cut(s)	1009
Cac8I	GCNNGC	4 cut(s)	210, 705, 924, 1255
CfoI	GCGC	1 cut(s)	214
Cfr13I	GGNCC	1 cut(s)	868
Csp6I	GTAC	3 cut(s)	232, 238, 893
CspCI	CAANNNNNGTGG	2 cut(s)	148, 183
CviAII	CATG	2 cut(s)	700, 1033
CviQI	GTAC	3 cut(s)	232, 238, 893
DdeI	CTNAG	4 cut(s)	56, 733, 739, 842
DraIII	CACNNNGTG	1 cut(s)	390
EaeI	YGGCCR	1 cut(s)	226
Eam1104I	CTCTTC	1 cut(s)	554
EarI	CTCTTC	1 cut(s)	554
EciI	GGCGGA	1 cut(s)	362
Eco130I	CCWWGG	1 cut(s)	288
Eco24I	GRGCYC	1 cut(s)	1043
Eco57I	CTGAAG	5 cut(s)	216, 402, 535, 896, 1270
Eco88I	CYCGRG	1 cut(s)	13
EcoRII	CCWGG	2 cut(s)	707, 948
EcoT14I	CCWWGG	1 cut(s)	288
EcoT38I	GRGCYC	1 cut(s)	1043
ErhI	CCWWGG	1 cut(s)	288
Esp3I	CGTCTC	1 cut(s)	457
FaeI	CATG	2 cut(s)	703, 1036
FaqI	GGGAC	1 cut(s)	642
FatI	CATG	2 cut(s)	699, 1032
FbaI	TGATCA	2 cut(s)	249, 433
FblI	GTMKAC	2 cut(s)	1113, 1296
Fnu4HI	GCNGC	3 cut(s)	357, 486, 1193
FokI	GGATG	1 cut(s)	956
FriOI	GRGCYC	1 cut(s)	1043
Fsp4HI	GCNGC	3 cut(s)	357, 486, 1193
FspBI	CTAG	5 cut(s)	441, 654, 689, 720, 1151
GlaI	GCGC	1 cut(s)	213
GluI	GCNGC	3 cut(s)	357, 486, 1193
GsaI	CCCAGC	2 cut(s)	667, 994
HaeIII	GGCC	4 cut(s)	228, 707, 870, 1195
HapII	CCGG	2 cut(s)	324, 1187
HhaI	GCGC	1 cut(s)	214
Hin1II	CATG	2 cut(s)	703, 1036
Hin6I	GCGC	1 cut(s)	212
HinP1I	GCGC	1 cut(s)	212
HincII	GTYRAC	2 cut(s)	463, 1065
HindII	GTYRAC	2 cut(s)	463, 1065
HindIII	AAGCTT	1 cut(s)	206
HinfI	GANTC	7 cut(s)	171, 200, 293, 320, 413, 793, 1183
HpaII	CCGG	2 cut(s)	324, 1187
HphI	GGTGA	1 cut(s)	16
Hpy166II	GTNNAC	6 cut(s)	7, 463, 895, 1065, 1114, 1297
Hpy188I	TCNGA	8 cut(s)	84, 364, 457, 508, 554, 770, 798, 876
Hpy188III	TCNNGA	8 cut(s)	13, 15, 110, 179, 329, 781, 981, 1106
Hpy8I	GTNNAC	6 cut(s)	7, 463, 895, 1065, 1114, 1297
Hpy99I	CGWCG	5 cut(s)	26, 77, 88, 494, 1267
HpyAV	CCTTC	3 cut(s)	56, 871, 1069
HpyCH4III	ACNGT	3 cut(s)	276, 828, 1118
HpyCH4V	TGCA	5 cut(s)	359, 563, 703, 745, 1018
HpyF10VI	GCNNNNNNNGC	2 cut(s)	353, 629
HpyF3I	CTNAG	4 cut(s)	56, 733, 739, 842
Hsp92II	CATG	2 cut(s)	703, 1036
HspAI	GCGC	1 cut(s)	212
Ksp22I	TGATCA	2 cut(s)	249, 433
LguI	GCTCTTC	1 cut(s)	554
LmnI	GCTCC	3 cut(s)	544, 994, 1250
Lsp1109I	GCAGC	2 cut(s)	343, 472
LweI	GCATC	1 cut(s)	368
MaeI	CTAG	5 cut(s)	441, 654, 689, 720, 1151
MaeIII	GTNAC	2 cut(s)	329, 832
MflI	RGATCY	3 cut(s)	17, 284, 770
MhlI	GDGCHC	2 cut(s)	549, 1043
MluCI	AATT	2 cut(s)	681, 953
MlyI	GAGTC	1 cut(s)	802
MmeI	TCCRAC	2 cut(s)	107, 886
MnlI	CCTC	9 cut(s)	20, 53, 142, 275, 403, 529, 548, 622, 1310
MseI	TTAA	2 cut(s)	764, 1131
MspI	CCGG	2 cut(s)	324, 1187
MspR9I	CCNGG	2 cut(s)	709, 950
MvaI	CCWGG	2 cut(s)	709, 950
MvnI	CGCG	1 cut(s)	26
MwoI	GCNNNNNNNGC	2 cut(s)	353, 629
NlaIII	CATG	2 cut(s)	703, 1036
NlaIV	GGNNCC	6 cut(s)	286, 540, 869, 996, 1104, 1252
NmuCI	GTSAC	2 cut(s)	329, 832
NspV	TTCGAA	3 cut(s)	203, 296, 1175
PaeR7I	CTCGAG	1 cut(s)	13
PciSI	GCTCTTC	1 cut(s)	554
PfeI	GAWTC	6 cut(s)	171, 200, 293, 320, 413, 1183
PkrI	GCNGC	3 cut(s)	358, 487, 1194
PleI	GAGTC	1 cut(s)	801
PpsI	GAGTC	1 cut(s)	801
Psp6I	CCWGG	2 cut(s)	707, 948
PspFI	CCCAGC	2 cut(s)	663, 990
PspGI	CCWGG	2 cut(s)	707, 948
PspN4I	GGNNCC	6 cut(s)	286, 540, 869, 996, 1104, 1252
PspPI	GGNCC	1 cut(s)	868
PsuI	RGATCY	3 cut(s)	17, 284, 770
RsaI	GTAC	3 cut(s)	233, 239, 894
RsaNI	GTAC	3 cut(s)	232, 238, 893
SapI	GCTCTTC	1 cut(s)	554
SaqAI	TTAA	2 cut(s)	764, 1131
SatI	GCNGC	3 cut(s)	357, 486, 1193
Sau96I	GGNCC	1 cut(s)	868
ScaI	AGTACT	1 cut(s)	233
SchI	GAGTC	1 cut(s)	802
ScrFI	CCNGG	2 cut(s)	709, 950
SduI	GDGCHC	2 cut(s)	549, 1043
SfaNI	GCATC	1 cut(s)	368
SfcI	CTRYAG	1 cut(s)	960
Sfr274I	CTCGAG	1 cut(s)	13
SfuI	TTCGAA	3 cut(s)	203, 296, 1175
SlaI	CTCGAG	1 cut(s)	13
SmlI	CTYRAG	2 cut(s)	13, 158
SmoI	CTYRAG	2 cut(s)	13, 158
Sse9I	AATT	2 cut(s)	681, 953
SsiI	CCGC	2 cut(s)	347, 1192
SspMI	CTAG	5 cut(s)	441, 654, 689, 720, 1151
StyD4I	CCNGG	2 cut(s)	707, 948
StyI	CCWWGG	1 cut(s)	288
TaaI	ACNGT	3 cut(s)	276, 828, 1118
TaqII	GACCGA	1 cut(s)	685
TasI	AATT	2 cut(s)	681, 953
TatI	WGTACW	2 cut(s)	231, 892
TauI	GCSGC	1 cut(s)	1195
TfiI	GAWTC	6 cut(s)	171, 200, 293, 320, 413, 1183
Tru1I	TTAA	2 cut(s)	764, 1131
Tru9I	TTAA	2 cut(s)	764, 1131
TscAI	CASTG	2 cut(s)	676, 747
TseFI	GTSAC	2 cut(s)	329, 832
TseI	GCWGC	2 cut(s)	356, 485
Tsp45I	GTSAC	2 cut(s)	329, 832
TspDTI	ATGAA	2 cut(s)	1076, 1158
TspGWI	ACGGA	4 cut(s)	10, 61, 101, 439
TspRI	CASTG	2 cut(s)	676, 747
XapI	RAATTY	1 cut(s)	953
XcmI	CCANNNNNNNNNTGG	1 cut(s)	878
XhoI	CTCGAG	1 cut(s)	13
XmiI	GTMKAC	2 cut(s)	1113, 1296
XspI	CTAG	5 cut(s)	441, 654, 689, 720, 1151
ZrmI	AGTACT	1 cut(s)	233

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.