MD15G1269000.v1.1

Essential subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser Thr consensus motif in nascent polypeptide chains

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Forward (+)
23262175 .. 23266545
4371 bp
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UTR
Exon/CDS
Intron
MD15G1269000.v1.1.491

Sequence Viewer

Length: 1308 bp
ATGCCGAACCTCTCCGTCTTGGTCACCGTCCTCACAGTTCTCCCCTTCGTCTGCCTCTCATTCTCTCCGGAATCCCCAACCCACCGCCGCCTCCTGGTGCTCCTCGACGACCACTCTCTCCAGTCCTCTCACTCCATCTTCTTCCACTCCCTCACCTCCCGTGGCTTCGATCTCGACTTCAAGCTCGCTGAGGACCCCAAGCTCTCGCTCCAGCGCTATGGCCAGTACTTGTACGACGGCCTCGTTCTCTTCTCCCCCTCCGCCCACAGTTTTGGAGGAGCTCTGGATGTGCAGTCCGTGCTCGATTTCGTTGACGCTGGGCACGACTTGATCTTGACGGCTGATGCCTCTGCATCTGATTTGATTCGGAGTATTGCCAAGCAATGCGGGGTCAATTTCGATGAGGATTCGTCGGCTGTGGTTATTGATCACACCAATTACGCGGTGTTGGAGACCCAAGGAGACCATACGTTGATTGCCAGTGACGATTTTATTCAATCGGATGTGATTCTGGGAAAGAAGAAGTTCGAGGCCCCTGTACTTTTCAAAGGGATTGCGCACTCATTAAGTGCTTCCAATAGCTTGGTTTTGAAAGTTCTTTCAGCATCTCCTTCAGCATATTCTGCCAACCCAAATGCCAGATTGTCCTACCCTCCATCACTTACCGGATCTGCTATTTCATTAGTGTCTGTTCTGCAAGCCAGAAACAATGCTCGAGTTCTGATTTCCGGCTCTACAGATATGTTTAGCAACAAATTGTTCAGATCGGCTGTGCAGAAGGTTGGGAACTCAAATAAATTTGAGAAGTCTGGTAATGAACAATTTGTGACTGAACTTAGCAAATGGATCTTCCATGAAAGAGGTCATCTAAAGGCTGTCAATGTTAGACACAATAAAGTTGGAGAAAATAATGAACCTGCAATCTATAGGATTAACGATGACCTGGACTATTATATTGAGATATATGAGTGGTCTGGAAAGAGCTGGGAACCGTATGTGGCGAATGATGTTCAAGTGCAGTTCTTCATGATGAGCCCTTTTGTGCTCAAAACTCTAGAAACTGATCAGAAGGGTCAGTACCATACGTCATTCAAGGTGCCTGATGTTTATGGGGTTTTCCAGTTCAAGGTTGACTATCACAGGCTTGGGTACACTAGCTTATCCCTATCCAAACAGATTCCTGTGCGGCCTTTCCGACATAATGAATATGAACGATTTATCCCCACTGCTTTCCCCTATTATGGAGCTTCATTTACCACAATGGTTGGGTTTTTTATCTTCAGCATTGTCTTCATGTACTACAAGTAA

Protein Analysis

436

Amino Acids

48.84

Weight (kDa)

6.2

Isoelectric Point (pI)

35.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
OST48_N PF03345 30 - 283 5.4e-69 OST48, N-terminal domain
OST48_MD PF23358 297 - 434 1.5e-48 OST48 middle domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 558
Acc36I ACCTGC 1 cut(s) 925
AccB1I GGYRCC 1 cut(s) 1096
AccII CGCG 1 cut(s) 443
AccIII TCCGGA 1 cut(s) 67
AciI CCGC 6 cut(s) 85, 88, 261, 387, 443, 1186
AclWI GGATC 2 cut(s) 676, 854
AcoI YGGCCR 1 cut(s) 220
AcsI RAATTY 1 cut(s) 797
AcuI CTGAAG 2 cut(s) 597, 1264
AfaI GTAC 6 cut(s) 227, 233, 540, 1079, 1151, 1298
AfeI AGCGCT 1 cut(s) 215
AfiI CCNNNNNNNGG 3 cut(s) 94, 1126, 1241
AgsI TTSAA 7 cut(s) 181, 497, 547, 592, 1013, 1093, 1126
AjnI CCWGG 2 cut(s) 93, 942
AloI GAACNNNNNNTCC 2 cut(s) 1203, 1235
AluBI AGCT 7 cut(s) 184, 202, 281, 582, 984, 1158, 1247
AluI AGCT 7 cut(s) 184, 202, 281, 582, 984, 1158, 1247
Alw21I GWGCWC 4 cut(s) 102, 283, 303, 1047
Alw26I GTCTC 2 cut(s) 446, 456
AlwI GGATC 2 cut(s) 676, 854
Ama87I CYCGRG 1 cut(s) 714
Aor13HI TCCGGA 1 cut(s) 67
Aor51HI AGCGCT 1 cut(s) 215
AoxI GGCC 4 cut(s) 220, 238, 531, 1187
ApoI RAATTY 1 cut(s) 797
Asp700I GAANNNNTTC 1 cut(s) 524
AspLEI GCGC 2 cut(s) 216, 559
AspS9I GGNCC 2 cut(s) 193, 532
AsuHPI GGTGA 2 cut(s) 16, 145
AvaI CYCGRG 1 cut(s) 714
AvaII GGWCC 1 cut(s) 193
BaeGI GKGCMC 1 cut(s) 324
BalI TGGCCA 1 cut(s) 222
BanI GGYRCC 1 cut(s) 1096
BanII GRGCYC 2 cut(s) 283, 1037
BarI GAAGNNNNNNTAC 2 cut(s) 1061, 1093
BbsI GAAGAC 1 cut(s) 1282
Bbv12I GWGCWC 4 cut(s) 102, 283, 303, 1047
BbvCI CCTCAGC 1 cut(s) 189
BccI CCATC 2 cut(s) 143, 664
BceAI ACGGC 2 cut(s) 253, 354
BciT130I CCWGG 2 cut(s) 95, 944
BclI TGATCA 2 cut(s) 427, 1063
BcoDI GTCTC 2 cut(s) 446, 456
BfaI CTAG 2 cut(s) 1055, 1155
BfmI CTRYAG 2 cut(s) 735, 925
BfoI RGCGCY 1 cut(s) 217
BfuAI ACCTGC 1 cut(s) 925
BisI GCNGC 2 cut(s) 88, 1187
BlsI GCNGC 2 cut(s) 89, 1188
BmcAI AGTACT 1 cut(s) 227
Bme1390I CCNGG 2 cut(s) 95, 944
Bme18I GGWCC 1 cut(s) 193
BmeT110I CYCGRG 1 cut(s) 714
BmgT120I GGNCC 2 cut(s) 193, 532
BmiI GGNNCC 4 cut(s) 195, 534, 990, 1098
BmrFI CCNGG 2 cut(s) 95, 944
BmsI GCATC 3 cut(s) 334, 362, 614
BpiI GAAGAC 1 cut(s) 1282
BpmI CTGGAG 2 cut(s) 104, 194
Bpu10I CCTNAGC 1 cut(s) 189
BsaI GGTCTC 2 cut(s) 446, 456
BsaJI CCNNGG 2 cut(s) 160, 457
BsaWI WCCGGW 2 cut(s) 67, 665
Bsc4I CCNNNNNNNGG 3 cut(s) 94, 1126, 1241
Bse1I ACTGG 4 cut(s) 121, 223, 480, 1120
Bse3DI GCAATG 1 cut(s) 389
BseAI TCCGGA 1 cut(s) 67
BseBI CCWGG 2 cut(s) 95, 944
BseDI CCNNGG 2 cut(s) 160, 457
BseGI GGATG 2 cut(s) 292, 508
BseLI CCNNNNNNNGG 3 cut(s) 94, 1126, 1241
BseMI GCAATG 1 cut(s) 389
BseMII CTCAG 1 cut(s) 180
BseNI ACTGG 4 cut(s) 121, 223, 480, 1120
BseRI GAGGAG 2 cut(s) 92, 291
BseSI GKGCMC 1 cut(s) 324
BseYI CCCAGC 2 cut(s) 317, 984
BsgI GTGCAG 3 cut(s) 311, 794, 1037
Bsh1236I CGCG 1 cut(s) 443
BshFI GGCC 4 cut(s) 222, 240, 533, 1189
BshNI GGYRCC 1 cut(s) 1096
BsiHKAI GWGCWC 4 cut(s) 102, 283, 303, 1047
BsiHKCI CYCGRG 1 cut(s) 714
BsiSI CCGG 3 cut(s) 68, 666, 729
BslI CCNNNNNNNGG 3 cut(s) 94, 1126, 1241
BsmAI GTCTC 2 cut(s) 446, 456
BsnI GGCC 4 cut(s) 222, 240, 533, 1189
Bso31I GGTCTC 2 cut(s) 446, 456
BsoBI CYCGRG 1 cut(s) 714
Bsp1286I GDGCHC 6 cut(s) 102, 283, 303, 324, 1037, 1047
Bsp13I TCCGGA 1 cut(s) 67
Bsp143I GATC 7 cut(s) 169, 330, 427, 668, 764, 846, 1063
BspACI CCGC 6 cut(s) 85, 88, 261, 387, 443, 1186
BspANI GGCC 4 cut(s) 222, 240, 533, 1189
BspCNI CTCAG 1 cut(s) 181
BspEI TCCGGA 1 cut(s) 67
BspFNI CGCG 1 cut(s) 443
BspHI TCATGA 1 cut(s) 1026
BspLI GGNNCC 4 cut(s) 195, 534, 990, 1098
BspMI ACCTGC 1 cut(s) 925
BspPI GGATC 2 cut(s) 676, 854
BspT107I GGYRCC 1 cut(s) 1096
BspTNI GGTCTC 2 cut(s) 446, 456
BsrDI GCAATG 1 cut(s) 389
BsrI ACTGG 4 cut(s) 121, 223, 480, 1120
BssECI CCNNGG 2 cut(s) 160, 457
BssMI GATC 7 cut(s) 169, 330, 427, 668, 764, 846, 1063
BssT1I CCWWGG 1 cut(s) 457
Bst2UI CCWGG 2 cut(s) 95, 944
Bst4CI ACNGT 4 cut(s) 28, 37, 269, 993
Bst6I CTCTTC 1 cut(s) 254
BstAPI GCANNNNNTGC 2 cut(s) 298, 623
BstC8I GCNNGC 2 cut(s) 186, 699
BstDEI CTNAG 2 cut(s) 189, 836
BstDSI CCRYGG 1 cut(s) 160
BstEII GGTNACC 1 cut(s) 22
BstF5I GGATG 2 cut(s) 292, 508
BstFNI CGCG 1 cut(s) 443
BstH2I RGCGCY 1 cut(s) 217
BstHHI GCGC 2 cut(s) 216, 559
BstKTI GATC 7 cut(s) 172, 333, 430, 671, 767, 849, 1066
BstMAI GTCTC 2 cut(s) 446, 456
BstMBI GATC 7 cut(s) 169, 330, 427, 668, 764, 846, 1063
BstMWI GCNNNNNNNGC 2 cut(s) 298, 623
BstNI CCWGG 2 cut(s) 95, 944
BstPI GGTNACC 1 cut(s) 22
BstSCI CCNGG 2 cut(s) 93, 942
BstSFI CTRYAG 2 cut(s) 735, 925
BstSLI GKGCMC 1 cut(s) 324
BstUI CGCG 1 cut(s) 443
BstV2I GAAGAC 1 cut(s) 1282
BstX2I RGATCY 2 cut(s) 668, 846
BstXI CCANNNNNNTGG 3 cut(s) 218, 272, 583
BstYI RGATCY 2 cut(s) 668, 846
BsuRI GGCC 4 cut(s) 222, 240, 533, 1189
BtgI CCRYGG 1 cut(s) 160
BtsCI GGATG 2 cut(s) 292, 508
BtsI GCAGTG 1 cut(s) 1224
BtsIMutI CAGTG 2 cut(s) 487, 1224
BveI ACCTGC 1 cut(s) 925
Cac8I GCNNGC 2 cut(s) 186, 699
CciI TCATGA 1 cut(s) 1026
CfoI GCGC 2 cut(s) 216, 559
Cfr13I GGNCC 2 cut(s) 193, 532
CseI GACGC 1 cut(s) 323
Csp6I GTAC 6 cut(s) 226, 232, 539, 1078, 1150, 1297
CspCI CAANNNNNGTGG 2 cut(s) 1246, 1281
CviAII CATG 3 cut(s) 854, 1027, 1294
CviQI GTAC 6 cut(s) 226, 232, 539, 1078, 1150, 1297
DdeI CTNAG 2 cut(s) 189, 836
DpnI GATC 7 cut(s) 171, 332, 429, 670, 766, 848, 1065
DpnII GATC 7 cut(s) 169, 330, 427, 668, 764, 846, 1063
EaeI YGGCCR 1 cut(s) 220
Eam1104I CTCTTC 1 cut(s) 254
EarI CTCTTC 1 cut(s) 254
EciI GGCGGA 1 cut(s) 250
Ecl136II GAGCTC 1 cut(s) 281
Eco130I CCWWGG 1 cut(s) 457
Eco24I GRGCYC 2 cut(s) 283, 1037
Eco31I GGTCTC 2 cut(s) 446, 456
Eco47I GGWCC 1 cut(s) 193
Eco47III AGCGCT 1 cut(s) 215
Eco53kI GAGCTC 1 cut(s) 281
Eco57I CTGAAG 2 cut(s) 597, 1264
Eco88I CYCGRG 1 cut(s) 714
Eco91I GGTNACC 1 cut(s) 22
EcoICRI GAGCTC 1 cut(s) 281
EcoO109I RGGNCCY 2 cut(s) 193, 532
EcoO65I GGTNACC 1 cut(s) 22
EcoRII CCWGG 2 cut(s) 93, 942
EcoT14I CCWWGG 1 cut(s) 457
EcoT38I GRGCYC 2 cut(s) 283, 1037
ErhI CCWWGG 1 cut(s) 457
FaeI CATG 3 cut(s) 857, 1030, 1297
FatI CATG 3 cut(s) 853, 1026, 1293
FauI CCCGC 1 cut(s) 380
FbaI TGATCA 2 cut(s) 427, 1063
Fnu4HI GCNGC 2 cut(s) 88, 1187
FokI GGATG 2 cut(s) 299, 515
FriOI GRGCYC 2 cut(s) 283, 1037
Fsp4HI GCNGC 2 cut(s) 88, 1187
FspBI CTAG 2 cut(s) 1055, 1155
FspI TGCGCA 1 cut(s) 558
GlaI GCGC 2 cut(s) 215, 558
GluI GCNGC 2 cut(s) 88, 1187
GsaI CCCAGC 2 cut(s) 321, 988
GsuI CTGGAG 2 cut(s) 104, 194
HaeII RGCGCY 1 cut(s) 217
HaeIII GGCC 4 cut(s) 222, 240, 533, 1189
HapII CCGG 3 cut(s) 68, 666, 729
HgaI GACGC 1 cut(s) 323
HhaI GCGC 2 cut(s) 216, 559
Hin1II CATG 3 cut(s) 857, 1030, 1297
Hin6I GCGC 2 cut(s) 214, 557
HinP1I GCGC 2 cut(s) 214, 557
HincII GTYRAC 2 cut(s) 313, 1132
HindII GTYRAC 2 cut(s) 313, 1132
HinfI GANTC 5 cut(s) 71, 364, 407, 508, 1177
HpaII CCGG 3 cut(s) 68, 666, 729
HphI GGTGA 2 cut(s) 16, 145
Hpy166II GTNNAC 3 cut(s) 313, 1132, 1152
Hpy188I TCNGA 7 cut(s) 358, 369, 502, 723, 764, 1068, 1196
Hpy188III TCNNGA 7 cut(s) 68, 173, 284, 334, 975, 1027, 1055
Hpy8I GTNNAC 3 cut(s) 313, 1132, 1152
Hpy99I CGWCG 3 cut(s) 110, 239, 415
HpyAV CCTTC 4 cut(s) 55, 621, 772, 1063
HpyCH4III ACNGT 4 cut(s) 28, 37, 269, 993
HpyCH4IV ACGT 2 cut(s) 470, 1085
HpyCH4V TGCA 6 cut(s) 292, 353, 697, 775, 920, 1018
HpyF10VI GCNNNNNNNGC 2 cut(s) 298, 623
HpyF3I CTNAG 2 cut(s) 189, 836
HpySE526I ACGT 2 cut(s) 470, 1085
Hsp92II CATG 3 cut(s) 857, 1030, 1297
HspAI GCGC 2 cut(s) 214, 557
Kpn2I TCCGGA 1 cut(s) 67
Ksp22I TGATCA 2 cut(s) 427, 1063
Kzo9I GATC 7 cut(s) 169, 330, 427, 668, 764, 846, 1063
LmnI GCTCC 4 cut(s) 105, 213, 278, 1244
LweI GCATC 3 cut(s) 334, 362, 614
MaeI CTAG 2 cut(s) 1055, 1155
MaeII ACGT 2 cut(s) 470, 1085
MaeIII GTNAC 3 cut(s) 22, 482, 826
MalI GATC 7 cut(s) 171, 332, 429, 670, 766, 848, 1065
MboI GATC 7 cut(s) 169, 330, 427, 668, 764, 846, 1063
MboII GAAGA 8 cut(s) 130, 133, 241, 532, 841, 1015, 1270, 1282
MflI RGATCY 2 cut(s) 668, 846
MhlI GDGCHC 6 cut(s) 102, 283, 303, 324, 1037, 1047
MlsI TGGCCA 1 cut(s) 222
MluCI AATT 5 cut(s) 394, 436, 755, 797, 821
MluNI TGGCCA 1 cut(s) 222
MmeI TCCRAC 3 cut(s) 429, 880, 1219
Mox20I TGGCCA 1 cut(s) 222
MroI TCCGGA 1 cut(s) 67
MroXI GAANNNNTTC 1 cut(s) 524
MscI TGGCCA 1 cut(s) 222
MseI TTAA 2 cut(s) 566, 933
Msp20I TGGCCA 1 cut(s) 222
MspI CCGG 3 cut(s) 68, 666, 729
MspR9I CCNGG 2 cut(s) 95, 944
MvaI CCWGG 2 cut(s) 95, 944
MvnI CGCG 1 cut(s) 443
MwoI GCNNNNNNNGC 2 cut(s) 298, 623
NdeII GATC 7 cut(s) 169, 330, 427, 668, 764, 846, 1063
NlaIII CATG 3 cut(s) 857, 1030, 1297
NlaIV GGNNCC 4 cut(s) 195, 534, 990, 1098
NmuCI GTSAC 3 cut(s) 22, 482, 826
NsbI TGCGCA 1 cut(s) 558
PaeR7I CTCGAG 1 cut(s) 714
PagI TCATGA 1 cut(s) 1026
PcsI WCGNNNNNNNCGW 2 cut(s) 240, 321
PdmI GAANNNNTTC 1 cut(s) 524
PfeI GAWTC 5 cut(s) 71, 364, 407, 508, 1177
PkrI GCNGC 2 cut(s) 89, 1188
PpuMI RGGWCCY 1 cut(s) 193
Psp124BI GAGCTC 1 cut(s) 283
Psp5II RGGWCCY 1 cut(s) 193
Psp6I CCWGG 2 cut(s) 93, 942
PspEI GGTNACC 1 cut(s) 22
PspFI CCCAGC 2 cut(s) 317, 984
PspGI CCWGG 2 cut(s) 93, 942
PspN4I GGNNCC 4 cut(s) 195, 534, 990, 1098
PspPI GGNCC 2 cut(s) 193, 532
PspPPI RGGWCCY 1 cut(s) 193
PspXI VCTCGAGB 1 cut(s) 714
PsuI RGATCY 2 cut(s) 668, 846
RsaI GTAC 6 cut(s) 227, 233, 540, 1079, 1151, 1298
RsaNI GTAC 6 cut(s) 226, 232, 539, 1078, 1150, 1297
SacI GAGCTC 1 cut(s) 283
SaqAI TTAA 2 cut(s) 566, 933
SatI GCNGC 2 cut(s) 88, 1187
Sau3AI GATC 7 cut(s) 169, 330, 427, 668, 764, 846, 1063
Sau96I GGNCC 2 cut(s) 193, 532
ScaI AGTACT 1 cut(s) 227
ScrFI CCNGG 2 cut(s) 95, 944
SduI GDGCHC 6 cut(s) 102, 283, 303, 324, 1037, 1047
SfaNI GCATC 3 cut(s) 334, 362, 614
SfcI CTRYAG 2 cut(s) 735, 925
Sfr274I CTCGAG 1 cut(s) 714
SinI GGWCC 1 cut(s) 193
SlaI CTCGAG 1 cut(s) 714
SmlI CTYRAG 1 cut(s) 714
SmoI CTYRAG 1 cut(s) 714
Sse9I AATT 5 cut(s) 394, 436, 755, 797, 821
SsiI CCGC 6 cut(s) 85, 88, 261, 387, 443, 1186
SspMI CTAG 2 cut(s) 1055, 1155
SstI GAGCTC 1 cut(s) 283
StyD4I CCNGG 2 cut(s) 93, 942
StyI CCWWGG 1 cut(s) 457
TaaI ACNGT 4 cut(s) 28, 37, 269, 993
TaiI ACGT 2 cut(s) 473, 1088
TaqI TCGA 7 cut(s) 105, 168, 174, 303, 399, 528, 715
TasI AATT 5 cut(s) 394, 436, 755, 797, 821
TatI WGTACW 3 cut(s) 225, 538, 1296
TauI GCSGC 2 cut(s) 90, 1189
TfiI GAWTC 5 cut(s) 71, 364, 407, 508, 1177
Tru1I TTAA 2 cut(s) 566, 933
Tru9I TTAA 2 cut(s) 566, 933
TscAI CASTG 2 cut(s) 487, 1231
TseFI GTSAC 3 cut(s) 22, 482, 826
Tsp45I GTSAC 3 cut(s) 22, 482, 826
TspDTI ATGAA 9 cut(s) 669, 831, 870, 927, 1015, 1218, 1224, 1239, 1282
TspGWI ACGGA 2 cut(s) 4, 286
TspRI CASTG 2 cut(s) 487, 1231
VpaK11BI GGWCC 1 cut(s) 193
XapI RAATTY 1 cut(s) 797
XbaI TCTAGA 1 cut(s) 1054
XhoI CTCGAG 1 cut(s) 714
XmnI GAANNNNTTC 1 cut(s) 524
XspI CTAG 2 cut(s) 1055, 1155
ZrmI AGTACT 1 cut(s) 227
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.