Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0006719

Physical Location & Seq

Genomic Coordinates Forward (+)

13604676 .. 13610541

Gene Structure 5866 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1070400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1311 bp

ATGTCGAAGCTCGTCGGCGTCCTCGCCTTCCTAACCCTAACCCTCCCATTTCTGGCCCACTCCTTCTCGCCGGACCACCCCACCGACCGCCGCGTTCTTGTTCTGCTTGACGACCTCGCTGTCAAATCCTCCCATTCCTTGTTCTTCAAGTCCCTCCAGTCTCGAGGCTTCGAGCTCGATTTCAAGCTCGCCGATGATCCCAACATCTCCTTGCAGCGATACGCCCTCTACAGCTACGACGCCTTGATCCTCTTTTCTCCTTCCGTCGATCGTTTTGGAGGATCCATTGATCTGGCTGCTATACTGGATTTCGTGGATAGCGGTCATGATTTGATCATTGCAGCTGATACCAATGCATCTGATTTGATCCGGCAAATCGCAGTTGAGTGCGGAGTTGATTTCGATGAGGATCCTGCTGCTATGGTCATAGATCACACAAGCTATGCAGTTTCAGACACTGAAGGTGATCATACAGTTATTGCTAGTGATGATTTCATCAAGTCTGATGTAATTTTGGGAAGTGAGAAAATTGAGGCTCCTGTACTTTTCCAAGGGATTGGCCATACAGTAAACTCTGAAAATAGCCTGGTTTTGAAAGTTCTCTCAGCTTCACTTTCAGCATATTCTGCTAACCCCAAAAGCAAGCTATCAAATCCTCCATCGCTCACTGGATCTGCTATATCTTTAGTTTCAGTTGTGCAGGCTAGAAACAATGCTCGGGTTTTGATATCTGGTTCATTAAGTTTGTTCAGCGATAGGTTTTTCAGATCTAAGGTGCAGAAGGCTGGAAGCTCAAAGAAACATGAGAAATCGGCAAATGAGCAGTTTCTGACTGAACTTAGCAAATGGGTCTTCCATGAAAGAGGTCATCTCAAGGCTGTGAATGTAAAACACCACAGAGTTGGGGAAGCCGATGAACCTGCAATTTACAGGATCAACGATGACTTGGAATATTCGGTCGAGATTTATGAATGGCGTGGGCAACGTTGGGAACCATATGTTGCTGATGATGTCCAAGTGCAGTTTTACATGATGAGTCCCTATGTTCTAAAAACCTTGTCGACTGATCAGAAGGGTCGTTATTTTACTGAGTTTAGGGTTCCAGATGTTTATGGGGTTTTCCAGTTCAAAGTTGAGTACAAGAGACTTGGCTACACAAGTTTGTCTCTCTCAAAGCAGATCCCTGTTCGACCATTTAAACACAATGAATACGAAAGATTTATACCAGCAGCTTATCCCTACTATGGAGCAGCATTTTCTATGATGACAGGTTTCTTCGTCTTTACGGCAGTCCACCTGTATAACAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00510 ko00513 ko01100 ko04141 map00510 map00513 map01100 map04141

Pfam Domains

Protein Families

DDOST_48kD

Protein Analysis

437

Amino Acids

48.94

Weight (kDa)

5.88

Isoelectric Point (pI)

30.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
OST48_N	PF03345	31 - 284	2.3e-69	OST48, N-terminal domain
OST48_MD	PF23358	298 - 435	1.7e-49	OST48 middle domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006719)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G66680
fragaria_vesca	FvH4_2g08200 FvH4_2g08200 FvH4_2g08200
malus_domestica	MD05G1070400.v1.1 MD10G1081300.v1.1 MD15G1269000.v1.1
prunus_persica	Prupe.7G148700_v2.0.a1 Prupe.7G148700_v2.0.a1 Prupe.7G148700_v2.0.a1 Prupe.7G148700_v2.0.a1 Prupe.7G148700_v2.0.a1 Prupe.8G102600_v2.0.a1
pyrus_communis	pycom05g06060 pycom10g06430 pycom15g23350
rosa_chinensis	RchiOBHm_Chr6g0262991
rosa_laevigata	RLG00000014386
rosa_multiflora	Rmu_sc0000596.1_g000071
rosa_roxburghii	Rroxscaffold_7G00204800
rosa_rugosa	Rorug06G0002700
rosa_samantha	Rh6AG121400 Rh6BG115000 Rh6CG113500 Rh6DG102800
rosa_wichuraiana	Rw6G010430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	119
Acc36I	ACCTGC	1 cut(s)	928
AccI	GTMKAC	1 cut(s)	1061
AccII	CGCG	1 cut(s)	93
AciI	CCGC	4 cut(s)	88, 91, 321, 390
AclI	AACGTT	1 cut(s)	985
AcoI	YGGCCR	1 cut(s)	559
AcuI	CTGAAG	1 cut(s)	480
AcyI	GRCGYC	2 cut(s)	18, 240
AfaI	GTAC	2 cut(s)	543, 1139
AfiI	CCNNNNNNNGG	2 cut(s)	52, 1244
AgsI	TTSAA	4 cut(s)	148, 184, 595, 1129
AjnI	CCWGG	1 cut(s)	585
Alw21I	GWGCWC	1 cut(s)	177
Alw26I	GTCTC	3 cut(s)	165, 1138, 1170
AlwNI	CAGNNNCTG	2 cut(s)	458, 829
Ama87I	CYCGRG	2 cut(s)	162, 717
AoxI	GGCC	2 cut(s)	54, 559
ApeKI	GCWGC	6 cut(s)	214, 296, 341, 416, 1229, 1250
AspS9I	GGNCC	2 cut(s)	55, 73
AsuHPI	GGTGA	1 cut(s)	476
AvaI	CYCGRG	2 cut(s)	162, 717
AvaII	GGWCC	1 cut(s)	73
BalI	TGGCCA	1 cut(s)	561
BamHI	GGATCC	2 cut(s)	281, 409
BanII	GRGCYC	1 cut(s)	177
BbsI	GAAGAC	1 cut(s)	844
Bbv12I	GWGCWC	1 cut(s)	177
BbvI	GCAGC	6 cut(s)	226, 283, 353, 403, 1241, 1262
BccI	CCATC	1 cut(s)	667
BceAI	ACGGC	1 cut(s)	1302
BcgI	CGANNNNNNTGC	2 cut(s)	902, 936
BciT130I	CCWGG	1 cut(s)	587
BclI	TGATCA	3 cut(s)	333, 466, 1066
BcoDI	GTCTC	3 cut(s)	165, 1138, 1170
BfaI	CTAG	2 cut(s)	483, 705
BfmI	CTRYAG	1 cut(s)	229
BfuAI	ACCTGC	1 cut(s)	928
BglII	AGATCT	1 cut(s)	767
BisI	GCNGC	7 cut(s)	91, 215, 297, 342, 417, 1230, 1251
BlsI	GCNGC	7 cut(s)	92, 216, 298, 343, 418, 1231, 1252
Bme1390I	CCNGG	1 cut(s)	587
Bme18I	GGWCC	1 cut(s)	73
BmeT110I	CYCGRG	2 cut(s)	162, 717
BmgT120I	GGNCC	2 cut(s)	55, 73
BmiI	GGNNCC	5 cut(s)	283, 411, 537, 993, 1101
BmrFI	CCNGG	1 cut(s)	587
BmsI	GCATC	1 cut(s)	365
BpiI	GAAGAC	1 cut(s)	844
BplI	GAGNNNNNCTC	2 cut(s)	855, 887
BpmI	CTGGAG	1 cut(s)	140
BpuEI	CTTGAG	1 cut(s)	857
BsaBI	GATNNNNATC	1 cut(s)	408
BsaHI	GRCGYC	2 cut(s)	18, 240
BsaJI	CCNNGG	1 cut(s)	550
Bsc4I	CCNNNNNNNGG	2 cut(s)	52, 1244
Bse1I	ACTGG	4 cut(s)	157, 309, 673, 1123
Bse3DI	GCAATG	1 cut(s)	336
Bse8I	GATNNNNATC	1 cut(s)	408
BseBI	CCWGG	1 cut(s)	587
BseDI	CCNNGG	1 cut(s)	550
BseJI	GATNNNNATC	1 cut(s)	408
BseLI	CCNNNNNNNGG	2 cut(s)	52, 1244
BseMI	GCAATG	1 cut(s)	336
BseMII	CTCAG	2 cut(s)	618, 1080
BseNI	ACTGG	4 cut(s)	157, 309, 673, 1123
BseXI	GCAGC	6 cut(s)	226, 283, 353, 403, 1241, 1262
BsgI	GTGCAG	3 cut(s)	719, 797, 1040
Bsh1236I	CGCG	1 cut(s)	93
Bsh1285I	CGRYCG	3 cut(s)	88, 271, 960
BshFI	GGCC	2 cut(s)	56, 561
BsiEI	CGRYCG	3 cut(s)	88, 271, 960
BsiHKAI	GWGCWC	1 cut(s)	177
BsiHKCI	CYCGRG	2 cut(s)	162, 717
BsiSI	CCGG	2 cut(s)	71, 370
BslFI	GGGAC	2 cut(s)	136, 1023
BslI	CCNNNNNNNGG	2 cut(s)	52, 1244
BsmAI	GTCTC	3 cut(s)	165, 1138, 1170
BsmFI	GGGAC	2 cut(s)	136, 1023
BsnI	GGCC	2 cut(s)	56, 561
BsoBI	CYCGRG	2 cut(s)	162, 717
Bsp1286I	GDGCHC	1 cut(s)	177
BspACI	CCGC	4 cut(s)	88, 91, 321, 390
BspANI	GGCC	2 cut(s)	56, 561
BspCNI	CTCAG	2 cut(s)	617, 1081
BspFNI	CGCG	1 cut(s)	93
BspHI	TCATGA	1 cut(s)	325
BspLI	GGNNCC	5 cut(s)	283, 411, 537, 993, 1101
BspMI	ACCTGC	1 cut(s)	928
BsrDI	GCAATG	1 cut(s)	336
BsrI	ACTGG	4 cut(s)	157, 309, 673, 1123
BssECI	CCNNGG	1 cut(s)	550
BssNI	GRCGYC	2 cut(s)	18, 240
BssT1I	CCWWGG	1 cut(s)	550
Bst2UI	CCWGG	1 cut(s)	587
Bst4CI	ACNGT	2 cut(s)	475, 568
BstACI	GRCGYC	2 cut(s)	18, 240
BstAPI	GCANNNNNTGC	1 cut(s)	626
BstC8I	GCNNGC	3 cut(s)	189, 644, 702
BstDEI	CTNAG	4 cut(s)	604, 771, 839, 1089
BstFNI	CGCG	1 cut(s)	93
BstMAI	GTCTC	3 cut(s)	165, 1138, 1170
BstMCI	CGRYCG	3 cut(s)	88, 271, 960
BstMWI	GCNNNNNNNGC	1 cut(s)	626
BstNI	CCWGG	1 cut(s)	587
BstSCI	CCNGG	1 cut(s)	585
BstSFI	CTRYAG	1 cut(s)	229
BstUI	CGCG	1 cut(s)	93
BstV1I	GCAGC	6 cut(s)	226, 283, 353, 403, 1241, 1262
BstV2I	GAAGAC	1 cut(s)	844
BstX2I	RGATCY	5 cut(s)	281, 409, 671, 767, 1179
BstXI	CCANNNNNNTGG	3 cut(s)	292, 557, 902
BstYI	RGATCY	5 cut(s)	281, 409, 671, 767, 1179
BsuRI	GGCC	2 cut(s)	56, 561
BtgZI	GCGATG	1 cut(s)	645
BtsIMutI	CAGTG	2 cut(s)	456, 666
BveI	ACCTGC	1 cut(s)	928
Cac8I	GCNNGC	3 cut(s)	189, 644, 702
CaiI	CAGNNNCTG	2 cut(s)	458, 829
CciI	TCATGA	1 cut(s)	325
Cfr13I	GGNCC	2 cut(s)	55, 73
CseI	GACGC	2 cut(s)	7, 248
Csp6I	GTAC	2 cut(s)	542, 1138
CviAII	CATG	4 cut(s)	326, 803, 857, 1030
CviQI	GTAC	2 cut(s)	542, 1138
DdeI	CTNAG	4 cut(s)	604, 771, 839, 1089
DraI	TTTAAA	1 cut(s)	1198
DrdI	GACNNNNNNGTC	1 cut(s)	119
DseDI	GACNNNNNNGTC	1 cut(s)	119
EaeI	YGGCCR	1 cut(s)	559
Ecl136II	GAGCTC	1 cut(s)	175
Eco130I	CCWWGG	1 cut(s)	550
Eco24I	GRGCYC	1 cut(s)	177
Eco32I	GATATC	1 cut(s)	729
Eco47I	GGWCC	1 cut(s)	73
Eco53kI	GAGCTC	1 cut(s)	175
Eco57I	CTGAAG	1 cut(s)	480
Eco88I	CYCGRG	2 cut(s)	162, 717
EcoICRI	GAGCTC	1 cut(s)	175
EcoRII	CCWGG	1 cut(s)	585
EcoRV	GATATC	1 cut(s)	729
EcoT14I	CCWWGG	1 cut(s)	550
EcoT22I	ATGCAT	1 cut(s)	358
EcoT38I	GRGCYC	1 cut(s)	177
ErhI	CCWWGG	1 cut(s)	550
FaeI	CATG	4 cut(s)	329, 806, 860, 1033
FaqI	GGGAC	2 cut(s)	136, 1023
FatI	CATG	4 cut(s)	325, 802, 856, 1029
FauNDI	CATATG	1 cut(s)	997
FbaI	TGATCA	3 cut(s)	333, 466, 1066
FblI	GTMKAC	1 cut(s)	1061
Fnu4HI	GCNGC	7 cut(s)	91, 215, 297, 342, 417, 1230, 1251
FriOI	GRGCYC	1 cut(s)	177
Fsp4HI	GCNGC	7 cut(s)	91, 215, 297, 342, 417, 1230, 1251
FspBI	CTAG	2 cut(s)	483, 705
GluI	GCNGC	7 cut(s)	91, 215, 297, 342, 417, 1230, 1251
GsuI	CTGGAG	1 cut(s)	140
HaeIII	GGCC	2 cut(s)	56, 561
HapII	CCGG	2 cut(s)	71, 370
HgaI	GACGC	2 cut(s)	7, 248
Hin1I	GRCGYC	2 cut(s)	18, 240
Hin1II	CATG	4 cut(s)	329, 806, 860, 1033
HincII	GTYRAC	1 cut(s)	1062
HindII	GTYRAC	1 cut(s)	1062
HinfI	GANTC	1 cut(s)	1036
HpaII	CCGG	2 cut(s)	71, 370
HphI	GGTGA	1 cut(s)	476
Hpy166II	GTNNAC	3 cut(s)	571, 1062, 1294
Hpy188I	TCNGA	7 cut(s)	361, 454, 505, 577, 767, 831, 1071
Hpy188III	TCNNGA	4 cut(s)	162, 326, 961, 1103
Hpy8I	GTNNAC	3 cut(s)	571, 1062, 1294
Hpy99I	CGWCG	3 cut(s)	17, 242, 269
HpyAV	CCTTC	6 cut(s)	37, 73, 270, 455, 775, 1066
HpyCH4III	ACNGT	2 cut(s)	475, 568
HpyCH4IV	ACGT	1 cut(s)	985
HpyCH4V	TGCA	8 cut(s)	214, 341, 356, 446, 700, 778, 923, 1021
HpyF10VI	GCNNNNNNNGC	1 cut(s)	626
HpyF3I	CTNAG	4 cut(s)	604, 771, 839, 1089
HpySE526I	ACGT	1 cut(s)	985
Hsp92I	GRCGYC	2 cut(s)	18, 240
Hsp92II	CATG	4 cut(s)	329, 806, 860, 1033
Ksp22I	TGATCA	3 cut(s)	333, 466, 1066
LmnI	GCTCC	2 cut(s)	541, 1247
Lsp1109I	GCAGC	6 cut(s)	226, 283, 353, 403, 1241, 1262
LweI	GCATC	1 cut(s)	365
MaeI	CTAG	2 cut(s)	483, 705
MaeII	ACGT	1 cut(s)	985
MboII	GAAGA	3 cut(s)	136, 844, 1267
MflI	RGATCY	5 cut(s)	281, 409, 671, 767, 1179
MhlI	GDGCHC	1 cut(s)	177
MlsI	TGGCCA	1 cut(s)	561
MluCI	AATT	3 cut(s)	510, 528, 924
MluNI	TGGCCA	1 cut(s)	561
MlyI	GAGTC	1 cut(s)	1045
Mox20I	TGGCCA	1 cut(s)	561
Mph1103I	ATGCAT	1 cut(s)	358
MscI	TGGCCA	1 cut(s)	561
MseI	TTAA	2 cut(s)	740, 1197
Msp20I	TGGCCA	1 cut(s)	561
MspA1I	CMGCKG	1 cut(s)	344
MspI	CCGG	2 cut(s)	71, 370
MspR9I	CCNGG	1 cut(s)	587
MvaI	CCWGG	1 cut(s)	587
MvnI	CGCG	1 cut(s)	93
MwoI	GCNNNNNNNGC	1 cut(s)	626
NdeI	CATATG	1 cut(s)	997
NlaIII	CATG	4 cut(s)	329, 806, 860, 1033
NlaIV	GGNNCC	5 cut(s)	283, 411, 537, 993, 1101
NsiI	ATGCAT	1 cut(s)	358
PaeR7I	CTCGAG	1 cut(s)	162
PagI	TCATGA	1 cut(s)	325
PkrI	GCNGC	7 cut(s)	92, 216, 298, 343, 418, 1231, 1252
Ple19I	CGATCG	1 cut(s)	271
PleI	GAGTC	1 cut(s)	1044
PpsI	GAGTC	1 cut(s)	1044
Psp124BI	GAGCTC	1 cut(s)	177
Psp1406I	AACGTT	1 cut(s)	985
Psp6I	CCWGG	1 cut(s)	585
PspGI	CCWGG	1 cut(s)	585
PspN4I	GGNNCC	5 cut(s)	283, 411, 537, 993, 1101
PspPI	GGNCC	2 cut(s)	55, 73
PstNI	CAGNNNCTG	2 cut(s)	458, 829
PsuI	RGATCY	5 cut(s)	281, 409, 671, 767, 1179
PvuI	CGATCG	1 cut(s)	271
PvuII	CAGCTG	1 cut(s)	344
RsaI	GTAC	2 cut(s)	543, 1139
RsaNI	GTAC	2 cut(s)	542, 1138
SacI	GAGCTC	1 cut(s)	177
SalI	GTCGAC	1 cut(s)	1060
SaqAI	TTAA	2 cut(s)	740, 1197
SatI	GCNGC	7 cut(s)	91, 215, 297, 342, 417, 1230, 1251
Sau96I	GGNCC	2 cut(s)	55, 73
SchI	GAGTC	1 cut(s)	1045
ScrFI	CCNGG	1 cut(s)	587
SduI	GDGCHC	1 cut(s)	177
SfaNI	GCATC	1 cut(s)	365
SfcI	CTRYAG	1 cut(s)	229
Sfr274I	CTCGAG	1 cut(s)	162
SinI	GGWCC	1 cut(s)	73
SlaI	CTCGAG	1 cut(s)	162
SmlI	CTYRAG	2 cut(s)	162, 872
SmoI	CTYRAG	2 cut(s)	162, 872
Sse9I	AATT	3 cut(s)	510, 528, 924
SsiI	CCGC	4 cut(s)	88, 91, 321, 390
SspI	AATATT	1 cut(s)	953
SspMI	CTAG	2 cut(s)	483, 705
SstI	GAGCTC	1 cut(s)	177
StyD4I	CCNGG	1 cut(s)	585
StyI	CCWWGG	1 cut(s)	550
TaaI	ACNGT	2 cut(s)	475, 568
TaiI	ACGT	1 cut(s)	988
TaqI	TCGA	9 cut(s)	5, 163, 171, 177, 267, 402, 960, 1061, 1189
TaqII	GACCGA	1 cut(s)	946
TasI	AATT	3 cut(s)	510, 528, 924
TatI	WGTACW	2 cut(s)	541, 1137
TauI	GCSGC	1 cut(s)	93
Tru1I	TTAA	2 cut(s)	740, 1197
Tru9I	TTAA	2 cut(s)	740, 1197
TscAI	CASTG	2 cut(s)	463, 673
TseI	GCWGC	6 cut(s)	214, 296, 341, 416, 1229, 1250
TspDTI	ATGAA	6 cut(s)	484, 726, 873, 930, 984, 1221
TspGWI	ACGGA	1 cut(s)	253
TspRI	CASTG	2 cut(s)	463, 673
VpaK11BI	GGWCC	1 cut(s)	73
XhoI	CTCGAG	1 cut(s)	162
XmiI	GTMKAC	1 cut(s)	1061
XspI	CTAG	2 cut(s)	483, 705
Zsp2I	ATGCAT	1 cut(s)	358

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.