Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0006719

Physical Location & Seq

Genomic Coordinates Forward (+)

11960030 .. 11965741

Gene Structure 5712 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1081300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1311 bp

ATGTCGAAGCTCCTCGGCGTCCTTGCCTTCCTAACCCTAACCCTCCCATTTCTTGCCCACTCCTTCTCGCCGGACCACCCCACCGACCGCCGCGTCCTCGTCCTGCTCGACGACCTCGCCGTCAAATCCTCCCACTCCTTGTTCTTCAAGTCCCTCCAGTCTCGAGGCTTCGAGCTCGATTTCAAGCTCGCCGATGATCCCAAGATCTCCTTGCAGCGATACGGCCTCTACAGCTACGACGCCTTGATCCTCTTTTCTCCTTCCGTCGATCGTTTTGGAGGATCCATTGACCTGGCTGCTATACTGGATTTCGTGGATAGCGGTCATGATTTGATCATTGCAGCTGATACCAATGCATCTGATTTGATCCGGCAAATCGCGGTTGAGTGCGGAGTTGATTTCGACGAGGATCCTGCTGCTATGGTCATAGATCACACAAGCTATGCAGTGTCAGACACTGAAGGAGATCATACAGTGATTGCTAGTGATGATTTCATCAAGTCTGATGTAATTTTGGGTAGCGAGAAAATTGAGGCTCCTGTACTTTTCCAAGGGATTGGCCATGCAGTAAACTCTGAAAATAGCCTGGTTTTGAAAGTTCTCTCAGCTTCACCTTCAGCATATTCTGCTAACCCCAAAAGCAAGCTGTCAAATCCTCCATCTCTCACTGGATCTGCTATATCTTTAGTTTCAGTTGTGCAGGCAAGAAACAATGCTCGGGTTTTGATCTCTGGTTCATTGAGTTTGTTCAGCGACAGGTTTTTCAGATCTAAGGTGCAGAAGGCTGGGAGCTCAAAGAAACATGAGAAATCGTCAAATGAGCAGTTTCTGACTGAAATTAGCAAATGGGTCTTCCATGAAAGAAGTCATCTCAAGGCTGTGAATGTAAAACACAACAGAGTTGGGGAAGCAGATGAACCTGCAATGTACAGGATCAACGATGACCTGCAATATTCGGTCGAGATTTATGAATGGCATGGACAACGATGGGAACCATATGTTGCTGATGATGTCCAAGTGCAGTTTTACATGATGAGTCCCTATGTTCTGAAAACCTTGTCAACTGATCAGAAGGGTCGTTACTTTACAGACTTTAAGGTTCCAGATGTTTATGGGGTTTTCCAGTTCAAGGTTGAGTACCAGAGGCTTGGCTACACAAGTTTGTCTCTCTCAAAGCAGATCCCTGTTCGACCATTTAGACACAATGAATACGAAAGATTTATACCAGCAGCTTATCCCTATTACGGAGCAGCATTTTCAATGATGACAGGTTTCTTCGTCTTCACAGTCGTCCACCTATACAACAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00510 ko00513 ko01100 ko04141 map00510 map00513 map01100 map04141

Pfam Domains

Protein Families

DDOST_48kD

Protein Analysis

437

Amino Acids

48.95

Weight (kDa)

5.87

Isoelectric Point (pI)

33.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
OST48_N	PF03345	31 - 284	1.2e-70	OST48, N-terminal domain
OST48_MD	PF23358	298 - 435	6.5e-49	OST48 middle domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006719)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G66680
fragaria_vesca	FvH4_2g08200 FvH4_2g08200 FvH4_2g08200
malus_domestica	MD05G1070400.v1.1 MD10G1081300.v1.1 MD15G1269000.v1.1
prunus_persica	Prupe.7G148700_v2.0.a1 Prupe.7G148700_v2.0.a1 Prupe.7G148700_v2.0.a1 Prupe.7G148700_v2.0.a1 Prupe.7G148700_v2.0.a1 Prupe.8G102600_v2.0.a1
pyrus_communis	pycom05g06060 pycom10g06430 pycom15g23350
rosa_chinensis	RchiOBHm_Chr6g0262991
rosa_laevigata	RLG00000014386
rosa_multiflora	Rmu_sc0000596.1_g000071
rosa_roxburghii	Rroxscaffold_7G00204800
rosa_rugosa	Rorug06G0002700
rosa_samantha	Rh6AG121400 Rh6BG115000 Rh6CG113500 Rh6DG102800
rosa_wichuraiana	Rw6G010430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	92, 119
Acc36I	ACCTGC	2 cut(s)	928, 954
AccII	CGCG	2 cut(s)	93, 380
AciI	CCGC	5 cut(s)	88, 91, 321, 380, 390
AcoI	YGGCCR	1 cut(s)	559
AcuI	CTGAAG	2 cut(s)	480, 600
AcyI	GRCGYC	2 cut(s)	18, 240
AfaI	GTAC	3 cut(s)	543, 929, 1139
AfiI	CCNNNNNNNGG	2 cut(s)	1129, 1244
AgsI	TTSAA	5 cut(s)	148, 184, 595, 1129, 1260
AjnI	CCWGG	2 cut(s)	291, 585
Alw21I	GWGCWC	2 cut(s)	177, 794
Alw26I	GTCTC	2 cut(s)	165, 1170
AlwNI	CAGNNNCTG	2 cut(s)	458, 829
Ama87I	CYCGRG	2 cut(s)	162, 717
AoxI	GGCC	2 cut(s)	223, 559
ApeKI	GCWGC	6 cut(s)	214, 296, 341, 416, 1229, 1250
AspS9I	GGNCC	1 cut(s)	73
AsuHPI	GGTGA	1 cut(s)	603
AvaI	CYCGRG	2 cut(s)	162, 717
AvaII	GGWCC	1 cut(s)	73
BalI	TGGCCA	1 cut(s)	561
BamHI	GGATCC	2 cut(s)	281, 409
BanII	GRGCYC	2 cut(s)	177, 794
BarI	GAAGNNNNNNTAC	2 cut(s)	1064, 1096
BbsI	GAAGAC	2 cut(s)	844, 1273
Bbv12I	GWGCWC	2 cut(s)	177, 794
BbvI	GCAGC	6 cut(s)	226, 283, 353, 403, 1241, 1262
BccI	CCATC	2 cut(s)	667, 981
BceAI	ACGGC	2 cut(s)	104, 238
BcgI	CGANNNNNNTGC	2 cut(s)	395, 429
BciT130I	CCWGG	2 cut(s)	293, 587
BclI	TGATCA	2 cut(s)	333, 1066
BcoDI	GTCTC	2 cut(s)	165, 1170
BfaI	CTAG	1 cut(s)	483
BfmI	CTRYAG	1 cut(s)	229
BfuAI	ACCTGC	2 cut(s)	928, 954
BglII	AGATCT	2 cut(s)	204, 767
BisI	GCNGC	7 cut(s)	91, 215, 297, 342, 417, 1230, 1251
BlsI	GCNGC	7 cut(s)	92, 216, 298, 343, 418, 1231, 1252
Bme1390I	CCNGG	2 cut(s)	293, 587
Bme18I	GGWCC	1 cut(s)	73
BmeT110I	CYCGRG	2 cut(s)	162, 717
BmgT120I	GGNCC	1 cut(s)	73
BmiI	GGNNCC	5 cut(s)	283, 411, 537, 993, 1101
BmrFI	CCNGG	2 cut(s)	293, 587
BmsI	GCATC	1 cut(s)	365
BpiI	GAAGAC	2 cut(s)	844, 1273
BpmI	CTGGAG	1 cut(s)	140
BpuEI	CTTGAG	1 cut(s)	857
BsaHI	GRCGYC	2 cut(s)	18, 240
BsaJI	CCNNGG	2 cut(s)	13, 550
Bsc4I	CCNNNNNNNGG	2 cut(s)	1129, 1244
Bse1I	ACTGG	4 cut(s)	157, 309, 673, 1123
Bse3DI	GCAATG	2 cut(s)	336, 930
BseBI	CCWGG	2 cut(s)	293, 587
BseDI	CCNNGG	2 cut(s)	13, 550
BseLI	CCNNNNNNNGG	2 cut(s)	1129, 1244
BseMI	GCAATG	2 cut(s)	336, 930
BseMII	CTCAG	1 cut(s)	618
BseNI	ACTGG	4 cut(s)	157, 309, 673, 1123
BseXI	GCAGC	6 cut(s)	226, 283, 353, 403, 1241, 1262
BseYI	CCCAGC	1 cut(s)	785
BsgI	GTGCAG	3 cut(s)	719, 797, 1040
Bsh1236I	CGCG	2 cut(s)	93, 380
Bsh1285I	CGRYCG	3 cut(s)	88, 271, 960
BshFI	GGCC	2 cut(s)	225, 561
BsiEI	CGRYCG	3 cut(s)	88, 271, 960
BsiHKAI	GWGCWC	2 cut(s)	177, 794
BsiHKCI	CYCGRG	2 cut(s)	162, 717
BsiSI	CCGG	2 cut(s)	71, 370
BslFI	GGGAC	2 cut(s)	136, 1023
BslI	CCNNNNNNNGG	2 cut(s)	1129, 1244
BsmAI	GTCTC	2 cut(s)	165, 1170
BsmFI	GGGAC	2 cut(s)	136, 1023
BsnI	GGCC	2 cut(s)	225, 561
BsoBI	CYCGRG	2 cut(s)	162, 717
Bsp1286I	GDGCHC	2 cut(s)	177, 794
Bsp1407I	TGTACA	1 cut(s)	927
BspACI	CCGC	5 cut(s)	88, 91, 321, 380, 390
BspANI	GGCC	2 cut(s)	225, 561
BspCNI	CTCAG	1 cut(s)	617
BspFNI	CGCG	2 cut(s)	93, 380
BspHI	TCATGA	1 cut(s)	325
BspLI	GGNNCC	5 cut(s)	283, 411, 537, 993, 1101
BspMI	ACCTGC	2 cut(s)	928, 954
BsrDI	GCAATG	2 cut(s)	336, 930
BsrGI	TGTACA	1 cut(s)	927
BsrI	ACTGG	4 cut(s)	157, 309, 673, 1123
BssECI	CCNNGG	2 cut(s)	13, 550
BssNI	GRCGYC	2 cut(s)	18, 240
BssT1I	CCWWGG	1 cut(s)	550
Bst2UI	CCWGG	2 cut(s)	293, 587
Bst4CI	ACNGT	2 cut(s)	475, 1288
BstACI	GRCGYC	2 cut(s)	18, 240
BstAPI	GCANNNNNTGC	1 cut(s)	626
BstAUI	TGTACA	1 cut(s)	927
BstC8I	GCNNGC	3 cut(s)	189, 644, 702
BstDEI	CTNAG	2 cut(s)	604, 771
BstFNI	CGCG	2 cut(s)	93, 380
BstMAI	GTCTC	2 cut(s)	165, 1170
BstMCI	CGRYCG	3 cut(s)	88, 271, 960
BstMWI	GCNNNNNNNGC	2 cut(s)	231, 626
BstNI	CCWGG	2 cut(s)	293, 587
BstSCI	CCNGG	2 cut(s)	291, 585
BstSFI	CTRYAG	1 cut(s)	229
BstUI	CGCG	2 cut(s)	93, 380
BstV1I	GCAGC	6 cut(s)	226, 283, 353, 403, 1241, 1262
BstV2I	GAAGAC	2 cut(s)	844, 1273
BstX2I	RGATCY	6 cut(s)	204, 281, 409, 671, 767, 1179
BstXI	CCANNNNNNTGG	3 cut(s)	292, 557, 1148
BstYI	RGATCY	6 cut(s)	204, 281, 409, 671, 767, 1179
BsuRI	GGCC	2 cut(s)	225, 561
BtsI	GCAGTG	1 cut(s)	453
BtsIMutI	CAGTG	4 cut(s)	453, 456, 480, 666
BveI	ACCTGC	2 cut(s)	928, 954
Cac8I	GCNNGC	3 cut(s)	189, 644, 702
CaiI	CAGNNNCTG	2 cut(s)	458, 829
CciI	TCATGA	1 cut(s)	325
Cfr13I	GGNCC	1 cut(s)	73
CseI	GACGC	3 cut(s)	7, 82, 248
Csp6I	GTAC	3 cut(s)	542, 928, 1138
CviAII	CATG	6 cut(s)	326, 563, 803, 857, 977, 1030
CviQI	GTAC	3 cut(s)	542, 928, 1138
DdeI	CTNAG	2 cut(s)	604, 771
DrdI	GACNNNNNNGTC	2 cut(s)	92, 119
DseDI	GACNNNNNNGTC	2 cut(s)	92, 119
EaeI	YGGCCR	1 cut(s)	559
Ecl136II	GAGCTC	2 cut(s)	175, 792
Eco130I	CCWWGG	1 cut(s)	550
Eco24I	GRGCYC	2 cut(s)	177, 794
Eco47I	GGWCC	1 cut(s)	73
Eco53kI	GAGCTC	2 cut(s)	175, 792
Eco57I	CTGAAG	2 cut(s)	480, 600
Eco88I	CYCGRG	2 cut(s)	162, 717
EcoICRI	GAGCTC	2 cut(s)	175, 792
EcoRII	CCWGG	2 cut(s)	291, 585
EcoT14I	CCWWGG	1 cut(s)	550
EcoT22I	ATGCAT	1 cut(s)	358
EcoT38I	GRGCYC	2 cut(s)	177, 794
ErhI	CCWWGG	1 cut(s)	550
FaeI	CATG	6 cut(s)	329, 566, 806, 860, 980, 1033
FalI	AAGNNNNNCTT	2 cut(s)	194, 226
FaqI	GGGAC	2 cut(s)	136, 1023
FatI	CATG	6 cut(s)	325, 562, 802, 856, 976, 1029
FauNDI	CATATG	1 cut(s)	997
FbaI	TGATCA	2 cut(s)	333, 1066
Fnu4HI	GCNGC	7 cut(s)	91, 215, 297, 342, 417, 1230, 1251
FriOI	GRGCYC	2 cut(s)	177, 794
Fsp4HI	GCNGC	7 cut(s)	91, 215, 297, 342, 417, 1230, 1251
FspBI	CTAG	1 cut(s)	483
GluI	GCNGC	7 cut(s)	91, 215, 297, 342, 417, 1230, 1251
GsaI	CCCAGC	1 cut(s)	789
GsuI	CTGGAG	1 cut(s)	140
HaeIII	GGCC	2 cut(s)	225, 561
HapII	CCGG	2 cut(s)	71, 370
HgaI	GACGC	3 cut(s)	7, 82, 248
Hin1I	GRCGYC	2 cut(s)	18, 240
Hin1II	CATG	6 cut(s)	329, 566, 806, 860, 980, 1033
HincII	GTYRAC	1 cut(s)	1062
HindII	GTYRAC	1 cut(s)	1062
HinfI	GANTC	1 cut(s)	1036
HpaII	CCGG	2 cut(s)	71, 370
HphI	GGTGA	1 cut(s)	603
Hpy166II	GTNNAC	3 cut(s)	571, 1062, 1294
Hpy188I	TCNGA	8 cut(s)	361, 454, 505, 577, 767, 831, 1050, 1071
Hpy188III	TCNNGA	4 cut(s)	162, 326, 961, 1103
Hpy8I	GTNNAC	3 cut(s)	571, 1062, 1294
Hpy99I	CGWCG	4 cut(s)	113, 242, 269, 407
HpyAV	CCTTC	7 cut(s)	37, 73, 270, 455, 624, 775, 1066
HpyCH4III	ACNGT	2 cut(s)	475, 1288
HpyF10VI	GCNNNNNNNGC	2 cut(s)	231, 626
HpyF3I	CTNAG	2 cut(s)	604, 771
Hsp92I	GRCGYC	2 cut(s)	18, 240
Hsp92II	CATG	6 cut(s)	329, 566, 806, 860, 980, 1033
Ksp22I	TGATCA	2 cut(s)	333, 1066
LmnI	GCTCC	4 cut(s)	15, 541, 789, 1247
Lsp1109I	GCAGC	6 cut(s)	226, 283, 353, 403, 1241, 1262
LweI	GCATC	1 cut(s)	365
MaeI	CTAG	1 cut(s)	483
MaeIII	GTNAC	1 cut(s)	1079
MboII	GAAGA	4 cut(s)	136, 844, 1267, 1273
MflI	RGATCY	6 cut(s)	204, 281, 409, 671, 767, 1179
MhlI	GDGCHC	2 cut(s)	177, 794
MlsI	TGGCCA	1 cut(s)	561
MluCI	AATT	3 cut(s)	510, 528, 837
MluNI	TGGCCA	1 cut(s)	561
MlyI	GAGTC	1 cut(s)	1045
Mox20I	TGGCCA	1 cut(s)	561
Mph1103I	ATGCAT	1 cut(s)	358
MscI	TGGCCA	1 cut(s)	561
MseI	TTAA	1 cut(s)	1095
Msp20I	TGGCCA	1 cut(s)	561
MspA1I	CMGCKG	1 cut(s)	344
MspI	CCGG	2 cut(s)	71, 370
MspR9I	CCNGG	2 cut(s)	293, 587
MvaI	CCWGG	2 cut(s)	293, 587
MvnI	CGCG	2 cut(s)	93, 380
MwoI	GCNNNNNNNGC	2 cut(s)	231, 626
NdeI	CATATG	1 cut(s)	997
NlaIII	CATG	6 cut(s)	329, 566, 806, 860, 980, 1033
NlaIV	GGNNCC	5 cut(s)	283, 411, 537, 993, 1101
NsiI	ATGCAT	1 cut(s)	358
PaeR7I	CTCGAG	1 cut(s)	162
PagI	TCATGA	1 cut(s)	325
PcsI	WCGNNNNNNNCGW	2 cut(s)	105, 117
PkrI	GCNGC	7 cut(s)	92, 216, 298, 343, 418, 1231, 1252
Ple19I	CGATCG	1 cut(s)	271
PleI	GAGTC	1 cut(s)	1044
PpsI	GAGTC	1 cut(s)	1044
Psp124BI	GAGCTC	2 cut(s)	177, 794
Psp6I	CCWGG	2 cut(s)	291, 585
PspFI	CCCAGC	1 cut(s)	785
PspGI	CCWGG	2 cut(s)	291, 585
PspN4I	GGNNCC	5 cut(s)	283, 411, 537, 993, 1101
PspPI	GGNCC	1 cut(s)	73
PstNI	CAGNNNCTG	2 cut(s)	458, 829
PsuI	RGATCY	6 cut(s)	204, 281, 409, 671, 767, 1179
PvuI	CGATCG	1 cut(s)	271
PvuII	CAGCTG	1 cut(s)	344
RsaI	GTAC	3 cut(s)	543, 929, 1139
RsaNI	GTAC	3 cut(s)	542, 928, 1138
SacI	GAGCTC	2 cut(s)	177, 794
SaqAI	TTAA	1 cut(s)	1095
SatI	GCNGC	7 cut(s)	91, 215, 297, 342, 417, 1230, 1251
Sau96I	GGNCC	1 cut(s)	73
SchI	GAGTC	1 cut(s)	1045
ScrFI	CCNGG	2 cut(s)	293, 587
SduI	GDGCHC	2 cut(s)	177, 794
SfaNI	GCATC	1 cut(s)	365
SfcI	CTRYAG	1 cut(s)	229
Sfr274I	CTCGAG	1 cut(s)	162
SinI	GGWCC	1 cut(s)	73
SlaI	CTCGAG	1 cut(s)	162
SmlI	CTYRAG	2 cut(s)	162, 872
SmoI	CTYRAG	2 cut(s)	162, 872
Sse9I	AATT	3 cut(s)	510, 528, 837
SsiI	CCGC	5 cut(s)	88, 91, 321, 380, 390
SspI	AATATT	1 cut(s)	953
SspMI	CTAG	1 cut(s)	483
SstI	GAGCTC	2 cut(s)	177, 794
StyD4I	CCNGG	2 cut(s)	291, 585
StyI	CCWWGG	1 cut(s)	550
TaaI	ACNGT	2 cut(s)	475, 1288
TaqI	TCGA	9 cut(s)	5, 108, 163, 171, 177, 267, 402, 960, 1189
TaqII	GACCGA	1 cut(s)	946
TasI	AATT	3 cut(s)	510, 528, 837
TatI	WGTACW	2 cut(s)	541, 927
TauI	GCSGC	1 cut(s)	93
Tru1I	TTAA	1 cut(s)	1095
Tru9I	TTAA	1 cut(s)	1095
TscAI	CASTG	4 cut(s)	453, 463, 480, 673
TseI	GCWGC	6 cut(s)	214, 296, 341, 416, 1229, 1250
TspDTI	ATGAA	6 cut(s)	484, 726, 873, 930, 984, 1221
TspGWI	ACGGA	2 cut(s)	253, 1260
TspRI	CASTG	4 cut(s)	453, 463, 480, 673
VpaK11BI	GGWCC	1 cut(s)	73
XhoI	CTCGAG	1 cut(s)	162
XspI	CTAG	1 cut(s)	483
Zsp2I	ATGCAT	1 cut(s)	358

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.