Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0009533

Physical Location & Seq

Genomic Coordinates Reverse (-)

566017 .. 569656

Gene Structure 3640 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g01110.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1380 bp

ATGAACTCTCTCCTAAACCCACAACAACAACAACAGATCAACACCACCGCCTCCTCCGCCGTCCAAGACCTCCAGCTCCACCACCACCACCACCGCCTCCACATGAATAACCAAACGACGCCGTTCGACTCCTCCCACGACGACTTCCTCGAGCAAATGCTCTCCACTCTCGGAAACCCCTCCTCCTGCTCCTCCTGGGCCGACGAAACCCCTCCCCTTCCTCCTCCGCCGCACTCCTCAAACGACAACAGCAACAATGTCGTTTTCTCCTACGACGACTCCTCCAACCTCGCCTCCAAGTTCCGCAGCCACCAGATCAGCGCCGGCGCCGCCGCTGCCTCCAAATCCTCCCCGAATGCCTCGGCGGCTGCCGCCGCCGCCATGATGCTCCAGCACCAGCTCATGATGTCCCGCGGCTCCTCCGACTCCGGCTACGCTCCGATGGGGCTCGCCTTGGGCAGCAACGGCGAGTTTGACCGCTCGCATAACGACGTTGACGGCTCGTCGTTTAAATCTCCTAACCAGGGCGGCGGTGACGGCGGTTCTTCTGTTCAGGCCTTGTTTAATGGCTTTACTGGATCTCTGTCTCCGAACCAGCCTCAGCATTTTCACCACCCTCAGGGTGGTGCGCTTCAAGCTCAGAACTATGGAGCTCAAGCACAAGGCATGACACAACCTCCGGCGAGCGGCTCAGCCGGGGCCACGGCTGCGCAACCCAGGCCTAGAGTCAGGGCCAGGCGAGGTCAAGCCACTGACCCACACTCCATTGCTGAAAGATTACGAAGAGAGAGAATTGCAGAGAGAATGAAGGCCCTGCAGGAGCTGGTTCCAAATGCCAACAAGACAGATAAGGCTTCAATGCTGGATGAGATCATCGACTATGTAAAGTTCCTGCAGCTCCAAGTCAAGGTTCTGAGCATGAGCAGGCTGGGTGGTGCTGGTGCTGTTGCTCCCCTCGTAGCTGATATGTCCTCTGAGGGAGGCGGTGACTGTATCCAGACCAGCGGCAATGGCGGGACCCGCGGCCGGAGCAACCAAACGGCGTCGTCGAACGACAGCATGACGGTGACGGAGCACCAGGTGGCCAAGCTCATGGAAGAGGACATGGGCTCCGCCATGCAGTACCTACAAGGCAAAGGCCTCTGCCTCATGCCTATTTCCTTGGCCACAGCTATCTCCACCGCCACGTGTCACACCAGAAACCCACTGAACAACAACAACAACAGCAGCAACAACAACAACCCTATCATGGCATCCAAAGGCGGAGAAGGACCGTCGTCTCCCAGCATGTCGGTGTTGACCGTCCAGTCAGCCACGATGGCCAGTAACGGCGGGGTTGACGGTTCCGGTAAAGACGCCGCCTCCGTCTCCAAGCCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000976 GO:0000981 GO:0001046 GO:0001047 GO:0001067 GO:0001228 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0007275 GO:0007276 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009555 GO:0009653 GO:0009888 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016049 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019953 GO:0021700 GO:0022412 GO:0022414 GO:0022622 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0032504 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0040007 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0044703 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048229 GO:0048232 GO:0048235 GO:0048364 GO:0048468 GO:0048469 GO:0048518 GO:0048522 GO:0048588 GO:0048589 GO:0048609 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051704 GO:0055046 GO:0060255 GO:0060560 GO:0065007 GO:0071695 GO:0071704 GO:0080090 GO:0080147 GO:0090304 GO:0090558 GO:0090627 GO:0097159 GO:0097659 GO:0099402 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:1905392 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HLH

Protein Analysis

460

Amino Acids

48.02

Weight (kDa)

6.37

Isoelectric Point (pI)

49.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HLH	PF00010	254 - 299	8.2e-10	Helix-loop-helix DNA-binding domain
bHLH_SAC51	PF23173	258 - 302	2.2e-06	Transcription factor SAC51 bHLH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009533)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G24260 AT2G24260
fragaria_vesca	FvH4_1g01110 FvH4_1g01110
malus_domestica	MD02G1009200.v1.1 MD15G1154600.v1.1
prunus_persica	Prupe.2G080600_v2.0.a1 Prupe.5G043700_v2.0.a1 Prupe.7G260800_v2.0.a1 Prupe.7G260800_v2.0.a1
pyrus_communis	pycom02g00820 pycom15g13820
rosa_chinensis	RchiOBHm_Chr2g0085911
rosa_laevigata	RLG00000015726
rosa_multiflora	Rmu_sc0001748.1_g000004
rosa_roxburghii	Rroxscaffold_2G00154940
rosa_rugosa	Rorug01G0464300
rosa_samantha	Rh2AG013200 Rh2BG013900 Rh2CG014400 Rh2DG015700
rosa_wichuraiana	Rw2G001180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1306
Acc16I	TGCGCA	1 cut(s)	711
AccB1I	GGYRCC	1 cut(s)	326
AccBSI	CCGCTC	2 cut(s)	480, 687
AccII	CGCG	2 cut(s)	414, 1023
AclWI	GGATC	1 cut(s)	586
AcoI	YGGCCR	4 cut(s)	1024, 1083, 1164, 1320
AcvI	CACGTG	1 cut(s)	1188
AcyI	GRCGYC	4 cut(s)	119, 327, 1043, 1356
AdeI	CACNNNGTG	1 cut(s)	1081
AfaI	GTAC	1 cut(s)	1124
AfiI	CCNNNNNNNGG	7 cut(s)	524, 619, 623, 686, 907, 1026, 1249
AflIII	ACRYGT	1 cut(s)	1187
AgsI	TTSAA	2 cut(s)	635, 858
AhdI	GACNNNNNGTC	1 cut(s)	502
AjnI	CCWGG	5 cut(s)	194, 522, 716, 734, 1077
AjuI	GAANNNNNNNTTGG	2 cut(s)	894, 926
AluBI	AGCT	9 cut(s)	76, 400, 638, 653, 823, 898, 962, 1090, 1172
AluI	AGCT	9 cut(s)	76, 400, 638, 653, 823, 898, 962, 1090, 1172
Alw21I	GWGCWC	2 cut(s)	655, 1077
Alw26I	GTCTC	3 cut(s)	591, 1284, 1372
AlwI	GGATC	1 cut(s)	586
AlwNI	CAGNNNCTG	1 cut(s)	823
Ama87I	CYCGRG	1 cut(s)	149
ApeKI	GCWGC	7 cut(s)	306, 335, 368, 459, 707, 895, 1227
AspLEI	GCGC	4 cut(s)	323, 329, 631, 712
AspS9I	GGNCC	6 cut(s)	198, 699, 732, 811, 1017, 1271
AsuC2I	CCSGG	1 cut(s)	697
AsuHPI	GGTGA	4 cut(s)	545, 602, 998, 1078
AvaI	CYCGRG	1 cut(s)	149
AvaII	GGWCC	2 cut(s)	1017, 1271
AxyI	CCTNAGG	1 cut(s)	618
BalI	TGGCCA	3 cut(s)	1085, 1166, 1322
BanI	GGYRCC	1 cut(s)	326
BanII	GRGCYC	3 cut(s)	450, 655, 1112
BbrPI	CACGTG	1 cut(s)	1188
Bbv12I	GWGCWC	2 cut(s)	655, 1077
BbvCI	CCTCAGC	1 cut(s)	600
BbvI	GCAGC	7 cut(s)	318, 322, 355, 471, 694, 907, 1239
BccI	CCATC	2 cut(s)	436, 1312
BceAI	ACGGC	9 cut(s)	44, 106, 481, 514, 553, 720, 1056, 1345, 1360
BcgI	CGANNNNNNTGC	2 cut(s)	241, 275
BciT130I	CCWGG	5 cut(s)	196, 524, 718, 736, 1079
BciVI	GTATCC	1 cut(s)	1004
BcnI	CCSGG	1 cut(s)	697
BcoDI	GTCTC	3 cut(s)	591, 1284, 1372
BfaI	CTAG	1 cut(s)	723
BfmI	CTRYAG	2 cut(s)	815, 893
BfoI	RGCGCY	2 cut(s)	324, 330
BfuI	GTATCC	1 cut(s)	1004
BglI	GCCNNNNNGGC	2 cut(s)	365, 1319
BlpI	GCTNAGC	1 cut(s)	691
Bme1390I	CCNGG	6 cut(s)	196, 524, 697, 718, 736, 1079
Bme18I	GGWCC	2 cut(s)	1017, 1271
BmeRI	GACNNNNNGTC	1 cut(s)	502
BmeT110I	CYCGRG	1 cut(s)	149
BmgT120I	GGNCC	6 cut(s)	198, 699, 732, 811, 1017, 1271
BmiI	GGNNCC	8 cut(s)	328, 418, 700, 828, 1018, 1019, 1111, 1345
BmrFI	CCNGG	6 cut(s)	196, 524, 697, 718, 736, 1079
BmsI	GCATC	2 cut(s)	375, 1262
BoxI	GACNNNNGTC	1 cut(s)	1276
BpmI	CTGGAG	2 cut(s)	56, 374
Bpu10I	CCTNAGC	1 cut(s)	600
Bpu1102I	GCTNAGC	1 cut(s)	691
BpuEI	CTTGAG	1 cut(s)	639
BpuMI	CCSGG	1 cut(s)	697
BsaAI	YACGTR	1 cut(s)	1188
BsaHI	GRCGYC	4 cut(s)	119, 327, 1043, 1356
BsaWI	WCCGGW	1 cut(s)	1346
Bsc4I	CCNNNNNNNGG	7 cut(s)	524, 619, 623, 686, 907, 1026, 1249
Bse118I	RCCGGY	1 cut(s)	323
Bse1I	ACTGG	3 cut(s)	580, 1306, 1323
Bse21I	CCTNAGG	1 cut(s)	618
Bse3DI	GCAATG	2 cut(s)	765, 1015
BseBI	CCWGG	5 cut(s)	196, 524, 718, 736, 1079
BseGI	GGATG	2 cut(s)	871, 1253
BseLI	CCNNNNNNNGG	7 cut(s)	524, 619, 623, 686, 907, 1026, 1249
BseMI	GCAATG	2 cut(s)	765, 1015
BseMII	CTCAG	6 cut(s)	614, 632, 653, 705, 905, 966
BseNI	ACTGG	3 cut(s)	580, 1306, 1323
BseRI	GAGGAG	8 cut(s)	43, 121, 172, 181, 213, 226, 271, 409
BseX3I	CGGCCG	1 cut(s)	1024
BseXI	GCAGC	7 cut(s)	318, 322, 355, 471, 694, 907, 1239
BseYI	CCCAGC	2 cut(s)	928, 1283
Bsh1236I	CGCG	2 cut(s)	414, 1023
Bsh1285I	CGRYCG	1 cut(s)	1027
BshNI	GGYRCC	1 cut(s)	326
BsiEI	CGRYCG	1 cut(s)	1027
BsiHKAI	GWGCWC	2 cut(s)	655, 1077
BsiHKCI	CYCGRG	1 cut(s)	149
BsiSI	CCGG	6 cut(s)	324, 429, 680, 696, 1027, 1347
BslFI	GGGAC	2 cut(s)	394, 1030
BslI	CCNNNNNNNGG	7 cut(s)	524, 619, 623, 686, 907, 1026, 1249
BsmAI	GTCTC	3 cut(s)	591, 1284, 1372
BsmBI	CGTCTC	2 cut(s)	1284, 1372
BsmFI	GGGAC	2 cut(s)	394, 1030
BsmI	GAATGC	1 cut(s)	361
BsoBI	CYCGRG	1 cut(s)	149
Bsp1286I	GDGCHC	4 cut(s)	450, 655, 1077, 1112
Bsp143I	GATC	4 cut(s)	36, 315, 578, 870
Bsp1720I	GCTNAGC	1 cut(s)	691
BspCNI	CTCAG	6 cut(s)	613, 631, 652, 704, 906, 967
BspFNI	CGCG	2 cut(s)	414, 1023
BspHI	TCATGA	1 cut(s)	402
BspLI	GGNNCC	8 cut(s)	328, 418, 700, 828, 1018, 1019, 1111, 1345
BspMAI	CTGCAG	2 cut(s)	819, 897
BspPI	GGATC	1 cut(s)	586
BspT107I	GGYRCC	1 cut(s)	326
BsrBI	CCGCTC	2 cut(s)	480, 687
BsrDI	GCAATG	2 cut(s)	765, 1015
BsrFI	RCCGGY	1 cut(s)	323
BsrI	ACTGG	3 cut(s)	580, 1306, 1323
BssAI	RCCGGY	1 cut(s)	323
BssMI	GATC	4 cut(s)	36, 315, 578, 870
BssNI	GRCGYC	4 cut(s)	119, 327, 1043, 1356
BssT1I	CCWWGG	2 cut(s)	453, 1161
Bst2UI	CCWGG	5 cut(s)	196, 524, 718, 736, 1079
Bst4CI	ACNGT	5 cut(s)	992, 1066, 1275, 1303, 1343
Bst6I	CTCTTC	2 cut(s)	778, 1092
BstACI	GRCGYC	4 cut(s)	119, 327, 1043, 1356
BstBAI	YACGTR	1 cut(s)	1188
BstC8I	GCNNGC	5 cut(s)	325, 450, 482, 685, 926
BstDEI	CTNAG	6 cut(s)	600, 618, 639, 691, 914, 975
BstDSI	CCRYGG	3 cut(s)	412, 702, 1021
BstF5I	GGATG	2 cut(s)	871, 1253
BstFNI	CGCG	2 cut(s)	414, 1023
BstH2I	RGCGCY	2 cut(s)	324, 330
BstHHI	GCGC	4 cut(s)	323, 329, 631, 712
BstKTI	GATC	4 cut(s)	39, 318, 581, 873
BstMAI	GTCTC	3 cut(s)	591, 1284, 1372
BstMBI	GATC	4 cut(s)	36, 315, 578, 870
BstMCI	CGRYCG	1 cut(s)	1027
BstNI	CCWGG	5 cut(s)	196, 524, 718, 736, 1079
BstNSI	RCATGY	1 cut(s)	1291
BstPAI	GACNNNNGTC	1 cut(s)	1276
BstSCI	CCNGG	6 cut(s)	194, 522, 695, 716, 734, 1077
BstSFI	CTRYAG	2 cut(s)	815, 893
BstUI	CGCG	2 cut(s)	414, 1023
BstV1I	GCAGC	7 cut(s)	318, 322, 355, 471, 694, 907, 1239
BstX2I	RGATCY	1 cut(s)	578
BstXI	CCANNNNNNTGG	1 cut(s)	1093
BstYI	RGATCY	1 cut(s)	578
BstZI	CGGCCG	1 cut(s)	1024
Bsu36I	CCTNAGG	1 cut(s)	618
BsuI	GTATCC	1 cut(s)	1004
BtgI	CCRYGG	3 cut(s)	412, 702, 1021
BtsCI	GGATG	2 cut(s)	871, 1253
BtsIMutI	CAGTG	2 cut(s)	750, 1205
Cac8I	GCNNGC	5 cut(s)	325, 450, 482, 685, 926
CaiI	CAGNNNCTG	1 cut(s)	823
CciI	TCATGA	1 cut(s)	402
CfoI	GCGC	4 cut(s)	323, 329, 631, 712
Cfr10I	RCCGGY	1 cut(s)	323
Cfr13I	GGNCC	6 cut(s)	198, 699, 732, 811, 1017, 1271
Cfr42I	CCGCGG	2 cut(s)	415, 1024
CseI	GACGC	3 cut(s)	127, 1032, 1364
CsiI	ACCWGGT	1 cut(s)	1077
Csp6I	GTAC	1 cut(s)	1123
CviQI	GTAC	1 cut(s)	1123
DdeI	CTNAG	6 cut(s)	600, 618, 639, 691, 914, 975
DinI	GGCGCC	1 cut(s)	328
DpnI	GATC	4 cut(s)	38, 317, 580, 872
DpnII	GATC	4 cut(s)	36, 315, 578, 870
DraI	TTTAAA	1 cut(s)	511
DraIII	CACNNNGTG	1 cut(s)	1081
DrdI	GACNNNNNNGTC	1 cut(s)	1306
DriI	GACNNNNNGTC	1 cut(s)	502
DseDI	GACNNNNNNGTC	1 cut(s)	1306
EaeI	YGGCCR	4 cut(s)	1024, 1083, 1164, 1320
EagI	CGGCCG	1 cut(s)	1024
Eam1104I	CTCTTC	2 cut(s)	778, 1092
Eam1105I	GACNNNNNGTC	1 cut(s)	502
EarI	CTCTTC	2 cut(s)	778, 1092
EciI	GGCGGA	4 cut(s)	46, 216, 1102, 1278
Ecl136II	GAGCTC	1 cut(s)	653
EclXI	CGGCCG	1 cut(s)	1024
Eco130I	CCWWGG	2 cut(s)	453, 1161
Eco147I	AGGCCT	3 cut(s)	557, 721, 1140
Eco24I	GRGCYC	3 cut(s)	450, 655, 1112
Eco47I	GGWCC	2 cut(s)	1017, 1271
Eco52I	CGGCCG	1 cut(s)	1024
Eco53kI	GAGCTC	1 cut(s)	653
Eco72I	CACGTG	1 cut(s)	1188
Eco81I	CCTNAGG	1 cut(s)	618
Eco88I	CYCGRG	1 cut(s)	149
EcoICRI	GAGCTC	1 cut(s)	653
EcoO109I	RGGNCCY	2 cut(s)	811, 1017
EcoRII	CCWGG	5 cut(s)	194, 522, 716, 734, 1077
EcoT14I	CCWWGG	2 cut(s)	453, 1161
EcoT38I	GRGCYC	3 cut(s)	450, 655, 1112
EgeI	GGCGCC	1 cut(s)	328
EheI	GGCGCC	1 cut(s)	328
ErhI	CCWWGG	2 cut(s)	453, 1161
Esp3I	CGTCTC	2 cut(s)	1284, 1372
FaqI	GGGAC	2 cut(s)	394, 1030
FauI	CCCGC	4 cut(s)	419, 1007, 1028, 1325
FokI	GGATG	2 cut(s)	878, 1240
FriOI	GRGCYC	3 cut(s)	450, 655, 1112
FspBI	CTAG	1 cut(s)	723
FspI	TGCGCA	1 cut(s)	711
GlaI	GCGC	4 cut(s)	322, 328, 630, 711
GsaI	CCCAGC	2 cut(s)	932, 1287
GsuI	CTGGAG	2 cut(s)	56, 374
HaeII	RGCGCY	2 cut(s)	324, 330
HapII	CCGG	6 cut(s)	324, 429, 680, 696, 1027, 1347
HgaI	GACGC	3 cut(s)	127, 1032, 1364
HhaI	GCGC	4 cut(s)	323, 329, 631, 712
Hin1I	GRCGYC	4 cut(s)	119, 327, 1043, 1356
Hin6I	GCGC	4 cut(s)	321, 327, 629, 710
HinP1I	GCGC	4 cut(s)	321, 327, 629, 710
HincII	GTYRAC	3 cut(s)	496, 1299, 1339
HindII	GTYRAC	3 cut(s)	496, 1299, 1339
HinfI	GANTC	4 cut(s)	128, 278, 425, 726
HpaII	CCGG	6 cut(s)	324, 429, 680, 696, 1027, 1347
HphI	GGTGA	4 cut(s)	545, 602, 998, 1078
Hpy166II	GTNNAC	3 cut(s)	496, 1299, 1339
Hpy188I	TCNGA	7 cut(s)	173, 424, 441, 591, 642, 915, 976
Hpy188III	TCNNGA	2 cut(s)	403, 997
Hpy8I	GTNNAC	3 cut(s)	496, 1299, 1339
Hpy99I	CGWCG	9 cut(s)	121, 143, 206, 278, 494, 508, 1048, 1051, 1279
HpyAV	CCTTC	3 cut(s)	227, 802, 1262
HpyCH4III	ACNGT	5 cut(s)	992, 1066, 1275, 1303, 1343
HpyCH4IV	ACGT	2 cut(s)	492, 1187
HpyCH4V	TGCA	4 cut(s)	797, 817, 895, 1120
HpyF3I	CTNAG	6 cut(s)	600, 618, 639, 691, 914, 975
HpySE526I	ACGT	2 cut(s)	492, 1187
Hsp92I	GRCGYC	4 cut(s)	119, 327, 1043, 1356
HspAI	GCGC	4 cut(s)	321, 327, 629, 710
KasI	GGCGCC	1 cut(s)	326
KflI	GGGWCCC	1 cut(s)	1017
KroI	GCCGGC	1 cut(s)	323
KroNI	GCCGGC	1 cut(s)	325
KspI	CCGCGG	2 cut(s)	415, 1024
Kzo9I	GATC	4 cut(s)	36, 315, 578, 870
Lsp1109I	GCAGC	7 cut(s)	318, 322, 355, 471, 694, 907, 1239
LweI	GCATC	2 cut(s)	375, 1262
MabI	ACCWGGT	1 cut(s)	1077
MaeI	CTAG	1 cut(s)	723
MaeII	ACGT	2 cut(s)	492, 1187
MaeIII	GTNAC	5 cut(s)	533, 986, 1066, 1190, 1325
MalI	GATC	4 cut(s)	38, 317, 580, 872
MbiI	CCGCTC	2 cut(s)	480, 687
MboI	GATC	4 cut(s)	36, 315, 578, 870
MboII	GAAGA	3 cut(s)	537, 795, 1109
MflI	RGATCY	1 cut(s)	578
MhlI	GDGCHC	4 cut(s)	450, 655, 1077, 1112
MlsI	TGGCCA	3 cut(s)	1085, 1166, 1322
MluCI	AATT	1 cut(s)	792
MluNI	TGGCCA	3 cut(s)	1085, 1166, 1322
Mly113I	GGCGCC	1 cut(s)	327
MlyI	GAGTC	4 cut(s)	122, 272, 419, 735
MmeI	TCCRAC	2 cut(s)	309, 447
Mox20I	TGGCCA	3 cut(s)	1085, 1166, 1322
MreI	CGCCGGCG	1 cut(s)	323
MroNI	GCCGGC	1 cut(s)	323
MscI	TGGCCA	3 cut(s)	1085, 1166, 1322
MseI	TTAA	2 cut(s)	510, 564
MslI	CAYNNNNRTG	2 cut(s)	1064, 1292
Msp20I	TGGCCA	3 cut(s)	1085, 1166, 1322
MspA1I	CMGCKG	4 cut(s)	335, 414, 1005, 1023
MspI	CCGG	6 cut(s)	324, 429, 680, 696, 1027, 1347
MspR9I	CCNGG	6 cut(s)	196, 524, 697, 718, 736, 1079
Mva1269I	GAATGC	1 cut(s)	361
MvaI	CCWGG	5 cut(s)	196, 524, 718, 736, 1079
MvnI	CGCG	2 cut(s)	414, 1023
NaeI	GCCGGC	1 cut(s)	325
NarI	GGCGCC	1 cut(s)	327
NciI	CCSGG	1 cut(s)	697
NdeII	GATC	4 cut(s)	36, 315, 578, 870
NgoMIV	GCCGGC	1 cut(s)	323
NlaIV	GGNNCC	8 cut(s)	328, 418, 700, 828, 1018, 1019, 1111, 1345
NmeAIII	GCCGAG	1 cut(s)	341
NmuCI	GTSAC	4 cut(s)	533, 986, 1066, 1190
NsbI	TGCGCA	1 cut(s)	711
NspI	RCATGY	1 cut(s)	1291
PaeR7I	CTCGAG	1 cut(s)	149
PagI	TCATGA	1 cut(s)	402
PceI	AGGCCT	3 cut(s)	557, 721, 1140
PcsI	WCGNNNNNNNCGW	3 cut(s)	147, 1046, 1362
PctI	GAATGC	1 cut(s)	361
PdiI	GCCGGC	1 cut(s)	325
PleI	GAGTC	4 cut(s)	122, 272, 419, 734
PluTI	GGCGCC	1 cut(s)	330
PmaCI	CACGTG	1 cut(s)	1188
PmlI	CACGTG	1 cut(s)	1188
PpsI	GAGTC	4 cut(s)	122, 272, 419, 734
Ppu21I	YACGTR	1 cut(s)	1188
PpuMI	RGGWCCY	1 cut(s)	1017
PshAI	GACNNNNGTC	1 cut(s)	1276
Psp124BI	GAGCTC	1 cut(s)	655
Psp5II	RGGWCCY	1 cut(s)	1017
Psp6I	CCWGG	5 cut(s)	194, 522, 716, 734, 1077
PspCI	CACGTG	1 cut(s)	1188
PspFI	CCCAGC	2 cut(s)	928, 1283
PspGI	CCWGG	5 cut(s)	194, 522, 716, 734, 1077
PspN4I	GGNNCC	8 cut(s)	328, 418, 700, 828, 1018, 1019, 1111, 1345
PspPI	GGNCC	6 cut(s)	198, 699, 732, 811, 1017, 1271
PspPPI	RGGWCCY	1 cut(s)	1017
PspXI	VCTCGAGB	1 cut(s)	149
PstI	CTGCAG	2 cut(s)	819, 897
PstNI	CAGNNNCTG	1 cut(s)	823
PsuI	RGATCY	1 cut(s)	578
RsaI	GTAC	1 cut(s)	1124
RsaNI	GTAC	1 cut(s)	1123
RseI	CAYNNNNRTG	2 cut(s)	1064, 1292
SacI	GAGCTC	1 cut(s)	655
SacII	CCGCGG	2 cut(s)	415, 1024
SaqAI	TTAA	2 cut(s)	510, 564
Sau3AI	GATC	4 cut(s)	36, 315, 578, 870
Sau96I	GGNCC	6 cut(s)	198, 699, 732, 811, 1017, 1271
SbfI	CCTGCAGG	1 cut(s)	819
SchI	GAGTC	4 cut(s)	122, 272, 419, 735
ScrFI	CCNGG	6 cut(s)	196, 524, 697, 718, 736, 1079
SdaI	CCTGCAGG	1 cut(s)	819
SduI	GDGCHC	4 cut(s)	450, 655, 1077, 1112
SexAI	ACCWGGT	1 cut(s)	1077
SfaNI	GCATC	2 cut(s)	375, 1262
SfcI	CTRYAG	2 cut(s)	815, 893
SfoI	GGCGCC	1 cut(s)	328
Sfr274I	CTCGAG	1 cut(s)	149
Sfr303I	CCGCGG	2 cut(s)	415, 1024
SgrAI	CRCCGGYG	1 cut(s)	323
SgrBI	CCGCGG	2 cut(s)	415, 1024
SinI	GGWCC	2 cut(s)	1017, 1271
SlaI	CTCGAG	1 cut(s)	149
SmiMI	CAYNNNNRTG	2 cut(s)	1064, 1292
SmlI	CTYRAG	2 cut(s)	149, 654
SmoI	CTYRAG	2 cut(s)	149, 654
Sse8387I	CCTGCAGG	1 cut(s)	819
Sse9I	AATT	1 cut(s)	792
SseBI	AGGCCT	3 cut(s)	557, 721, 1140
SspDI	GGCGCC	1 cut(s)	326
SspMI	CTAG	1 cut(s)	723
SstI	GAGCTC	1 cut(s)	655
StuI	AGGCCT	3 cut(s)	557, 721, 1140
StyD4I	CCNGG	6 cut(s)	194, 522, 695, 716, 734, 1077
StyI	CCWWGG	2 cut(s)	453, 1161
TaaI	ACNGT	5 cut(s)	992, 1066, 1275, 1303, 1343
TaiI	ACGT	2 cut(s)	495, 1190
TaqI	TCGA	4 cut(s)	126, 150, 876, 1049
TasI	AATT	1 cut(s)	792
Tru1I	TTAA	2 cut(s)	510, 564
Tru9I	TTAA	2 cut(s)	510, 564
TscAI	CASTG	2 cut(s)	757, 1212
TseFI	GTSAC	4 cut(s)	533, 986, 1066, 1190
TseI	GCWGC	7 cut(s)	306, 335, 368, 459, 707, 895, 1227
Tsp45I	GTSAC	4 cut(s)	533, 986, 1066, 1190
TspDTI	ATGAA	3 cut(s)	17, 119, 821
TspGWI	ACGGA	2 cut(s)	1085, 1354
TspRI	CASTG	2 cut(s)	757, 1212
VpaK11BI	GGWCC	2 cut(s)	1017, 1271
XceI	RCATGY	1 cut(s)	1291
XcmI	CCANNNNNNNNNTGG	1 cut(s)	620
XhoI	CTCGAG	1 cut(s)	149
XspI	CTAG	1 cut(s)	723

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.