pycom02g00820

Transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
OG0009533
Physical Location & Seq
Reverse (-)
486182 .. 490185
4004 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g00820.7

Sequence Viewer

Length: 1407 bp
ATGCAGCCTTGTAGCAGAGAAATGCAGGAAATGAACTCCTTGTTGAACTCCTCAGCCTCCTCCTCCCAACTCTCCCTCCAAGACCACCACCACCTCCAACAACAACCACACTCGCACTCCCAGATGCATCATCAAATTCCAACCCCCTCCGCATCCCACTTCGACTCCGCCACCCACGATGACTTCCTCGAGCAAATGCTCTCCACCCTCGGCCCCTCCTGGGCCTCTGCCGCCGACGATGCCCCGCCTCCGCTCTCCTCCAACCCCGACAATGTCGTCTTCTCCTACGACGACTCCGCCACCCTCGCCGCCAAGTTTCGCAGCCAGCAGATCAGCGCCGGTTCCGGCGCTAACAAGTCCGCCTCCGCATCAGCCGCAGCTGCTGCCGCCATGATGCTCCAGCACCAGCTCATGATGTCCAGATCAGGCGCCGCCGACTCCGGCTTTGGTCCCAGGGGATTGTCTTTGGGAAACAACGGCGACTTTGAGCGCTCCAACAACGACGTCGGCGACGGCTCCTCCTTCAAATCCTCCAATCAAGTGGGCGGTGATGGGGCTTCTTCTGTTCAATCCCTGTTCAATGGCTTCGGTGCATCACTGCATGCAGCTGCTAATTCTCGGTCTCCAAATTTTCACCACCCTCAGGGAGGTCAGCTGCAAGCGCAGAACTACGGAGGTGCAGGGGCGGCGGTGAACCTAGCTCCGGCGGGTGGCTCGGCTGGGGCAGCGCCGGCCCAACCTAGGCCCAGAGTCAGGGCGAGAAGAGGTCAAGCCACTGACCCACACAGCATAGCCGAAAGATTACGGAGAGAGAGAATTGCAGAGAGAATGAAGGCTCTGCAAGAGCTCGTTCCCAATGCCAACAAGACAGACAAGGCTTCAATGCTGGATGAGATAATCGATTATGTAAAATTCCTCCAGCTCCAAGTCAAGGTTCTGAGCATGAGCAGGTTGGGCGGTGCAGGTGCTGTTGCTCCCCTTGTTGCTGATATGTCCTCTGAGGGTGGCGGTGATTGTATCCAAGCCAGTGCCAACGGCGGGACGCGCGGACGGAGCTCAAACGGCAACCAAACGGCCTCCTCATCTAACGACAACAGCATGACGGTGACGGAACACCAAGTCGCCAAGCTCATGAAGGAAGACATGGGCTCCGCCATGCAGTACCTCCAGGGAAAAGGCCTCTGCCTCATGCCGATTTCGTTGGCCACCGCCATCTCCAGCGCCACATGTCACTCCAGGAACCCCCTCCTCCACAACAACAGCAACAACCACCAAGTTGTCCCGTCCAACGGTGGTGACGGGCCCTCCTCTCCCAGCATGTCCGTGCTGACCGTCCAGTCAGCCACCATGGGTAACGGTGGGGTTGACGGTTCCGTCAAGGACGCCACCTCCGTCTCCAAGCCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000976 GO:0000981 GO:0001046 GO:0001047 GO:0001067 GO:0001228 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0007275 GO:0007276 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009555 GO:0009653 GO:0009888 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016049 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019953 GO:0021700 GO:0022412 GO:0022414 GO:0022622 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0032504 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0040007 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0044703 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048229 GO:0048232 GO:0048235 GO:0048364 GO:0048468 GO:0048469 GO:0048518 GO:0048522 GO:0048588 GO:0048589 GO:0048609 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051704 GO:0055046 GO:0060255 GO:0060560 GO:0065007 GO:0071695 GO:0071704 GO:0080090 GO:0080147 GO:0090304 GO:0090558 GO:0090627 GO:0097159 GO:0097659 GO:0099402 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:1905392 GO:1990837 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HLH

Protein Analysis

469

Amino Acids

48.5

Weight (kDa)

6.51

Isoelectric Point (pI)

49.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 953
AasI GACNNNNNNGTC 3 cut(s) 275, 1336, 1373
AatII GACGTC 1 cut(s) 507
Acc36I ACCTGC 2 cut(s) 939, 953
AccB1I GGYRCC 1 cut(s) 428
AccBSI CCGCTC 1 cut(s) 253
AccII CGCG 2 cut(s) 1045, 1047
AcoI YGGCCR 1 cut(s) 1203
AcsI RAATTY 3 cut(s) 135, 628, 911
AcyI GRCGYC 3 cut(s) 429, 504, 1383
AfaI GTAC 1 cut(s) 1163
AfeI AGCGCT 1 cut(s) 491
AflIII ACRYGT 1 cut(s) 1226
AgsI TTSAA 5 cut(s) 46, 526, 569, 580, 882
AjnI CCWGG 4 cut(s) 218, 452, 1167, 1235
AjuI GAANNNNNNNTTGG 2 cut(s) 918, 950
AluBI AGCT 9 cut(s) 380, 409, 608, 655, 701, 847, 922, 1056, 1129
AluI AGCT 9 cut(s) 380, 409, 608, 655, 701, 847, 922, 1056, 1129
Alw21I GWGCWC 2 cut(s) 849, 1058
Alw26I GTCTC 2 cut(s) 627, 1399
AlwNI CAGNNNCTG 2 cut(s) 383, 968
Ama87I CYCGRG 1 cut(s) 188
Aor51HI AGCGCT 1 cut(s) 491
AoxI GGCC 8 cut(s) 211, 222, 732, 743, 1074, 1177, 1203, 1301
ApaI GGGCCC 1 cut(s) 1305
ApeKI GCWGC 9 cut(s) 4, 321, 377, 380, 383, 605, 608, 655, 725
ApoI RAATTY 3 cut(s) 135, 628, 911
ArsI GACNNNNNNTTYG 2 cut(s) 428, 460
AspA2I CCTAGG 1 cut(s) 740
AspLEI GCGC 8 cut(s) 338, 350, 431, 492, 664, 730, 1047, 1223
AspS9I GGNCC 7 cut(s) 212, 222, 449, 733, 744, 1301, 1302
AsuHPI GGTGA 6 cut(s) 560, 626, 703, 1022, 1117, 1307
AvaI CYCGRG 1 cut(s) 188
AvaII GGWCC 1 cut(s) 449
AvrII CCTAGG 1 cut(s) 740
AxyI CCTNAGG 1 cut(s) 642
BaeGI GKGCMC 1 cut(s) 1305
BalI TGGCCA 1 cut(s) 1205
BanI GGYRCC 1 cut(s) 428
BanII GRGCYC 4 cut(s) 849, 1058, 1151, 1305
BbsI GAAGAC 2 cut(s) 271, 1146
Bbv12I GWGCWC 2 cut(s) 849, 1058
BbvCI CCTCAGC 1 cut(s) 52
BbvI GCAGC 9 cut(s) 16, 333, 367, 370, 389, 595, 617, 642, 737
BccI CCATC 2 cut(s) 545, 1220
BceAI ACGGC 5 cut(s) 493, 529, 1051, 1078, 1089
BciT130I CCWGG 4 cut(s) 220, 454, 1169, 1237
BciVI GTATCC 1 cut(s) 1028
BcoDI GTCTC 2 cut(s) 627, 1399
BfaI CTAG 2 cut(s) 698, 741
BfoI RGCGCY 6 cut(s) 339, 351, 432, 493, 731, 1224
BfuAI ACCTGC 2 cut(s) 939, 953
BfuI GTATCC 1 cut(s) 1028
BlnI CCTAGG 1 cut(s) 740
Bme1390I CCNGG 4 cut(s) 220, 454, 1169, 1237
Bme18I GGWCC 1 cut(s) 449
BmeT110I CYCGRG 1 cut(s) 188
BmgT120I GGNCC 7 cut(s) 212, 222, 449, 733, 744, 1301, 1302
BmiI GGNNCC 9 cut(s) 214, 343, 430, 451, 517, 1150, 1241, 1303, 1372
BmrFI CCNGG 4 cut(s) 220, 454, 1169, 1237
BmsI GCATC 7 cut(s) 114, 136, 161, 229, 377, 384, 602
BpiI GAAGAC 2 cut(s) 271, 1146
BpmI CTGGAG 5 cut(s) 383, 902, 1151, 1201, 1219
Bpu10I CCTNAGC 1 cut(s) 52
Bsa29I ATCGAT 1 cut(s) 900
BsaHI GRCGYC 3 cut(s) 429, 504, 1383
BsaI GGTCTC 1 cut(s) 627
BsaJI CCNNGG 7 cut(s) 208, 219, 452, 453, 740, 1168, 1347
Bse118I RCCGGY 2 cut(s) 338, 730
Bse1I ACTGG 2 cut(s) 1026, 1336
Bse21I CCTNAGG 1 cut(s) 642
BseBI CCWGG 4 cut(s) 220, 454, 1169, 1237
BseCI ATCGAT 1 cut(s) 900
BseDI CCNNGG 7 cut(s) 208, 219, 452, 453, 740, 1168, 1347
BseGI GGATG 2 cut(s) 152, 895
BseMII CTCAG 4 cut(s) 66, 656, 929, 990
BseNI ACTGG 2 cut(s) 1026, 1336
BseRI GAGGAG 8 cut(s) 40, 49, 52, 247, 508, 1069, 1238, 1297
BseSI GKGCMC 1 cut(s) 1305
BseXI GCAGC 9 cut(s) 16, 333, 367, 370, 389, 595, 617, 642, 737
BseYI CCCAGC 2 cut(s) 719, 1313
BsgI GTGCAG 2 cut(s) 699, 981
Bsh1236I CGCG 2 cut(s) 1045, 1047
BshFI GGCC 8 cut(s) 213, 224, 734, 745, 1076, 1179, 1205, 1303
BshNI GGYRCC 1 cut(s) 428
BshVI ATCGAT 1 cut(s) 900
BsiHKAI GWGCWC 2 cut(s) 849, 1058
BsiHKCI CYCGRG 1 cut(s) 188
BsiSI CCGG 5 cut(s) 339, 345, 441, 704, 731
BslFI GGGAC 3 cut(s) 435, 1054, 1265
BsmAI GTCTC 2 cut(s) 627, 1399
BsmBI CGTCTC 1 cut(s) 1399
BsmFI GGGAC 3 cut(s) 435, 1054, 1265
BsnI GGCC 8 cut(s) 213, 224, 734, 745, 1076, 1179, 1205, 1303
Bso31I GGTCTC 1 cut(s) 627
BsoBI CYCGRG 1 cut(s) 188
Bsp120I GGGCCC 1 cut(s) 1301
Bsp1286I GDGCHC 4 cut(s) 849, 1058, 1151, 1305
Bsp143I GATC 2 cut(s) 330, 422
Bsp19I CCATGG 1 cut(s) 1347
BspANI GGCC 8 cut(s) 213, 224, 734, 745, 1076, 1179, 1205, 1303
BspCNI CTCAG 4 cut(s) 65, 655, 930, 991
BspDI ATCGAT 1 cut(s) 900
BspFNI CGCG 2 cut(s) 1045, 1047
BspHI TCATGA 2 cut(s) 411, 1131
BspLI GGNNCC 9 cut(s) 214, 343, 430, 451, 517, 1150, 1241, 1303, 1372
BspMI ACCTGC 2 cut(s) 939, 953
BspT107I GGYRCC 1 cut(s) 428
BspTNI GGTCTC 1 cut(s) 627
BsrBI CCGCTC 1 cut(s) 253
BsrFI RCCGGY 2 cut(s) 338, 730
BsrI ACTGG 2 cut(s) 1026, 1336
BssAI RCCGGY 2 cut(s) 338, 730
BssECI CCNNGG 7 cut(s) 208, 219, 452, 453, 740, 1168, 1347
BssMI GATC 2 cut(s) 330, 422
BssNI GRCGYC 3 cut(s) 429, 504, 1383
BssT1I CCWWGG 2 cut(s) 740, 1347
Bst2UI CCWGG 4 cut(s) 220, 454, 1169, 1237
Bst4CI ACNGT 5 cut(s) 1105, 1292, 1333, 1358, 1370
Bst6I CTCTTC 1 cut(s) 757
BstACI GRCGYC 3 cut(s) 429, 504, 1383
BstAPI GCANNNNNTGC 1 cut(s) 383
BstC8I GCNNGC 4 cut(s) 326, 603, 660, 732
BstDEI CTNAG 4 cut(s) 52, 642, 938, 999
BstDSI CCRYGG 1 cut(s) 1347
BstENI CCTNNNNNAGG 1 cut(s) 645
BstF5I GGATG 2 cut(s) 152, 895
BstFNI CGCG 2 cut(s) 1045, 1047
BstH2I RGCGCY 6 cut(s) 339, 351, 432, 493, 731, 1224
BstHHI GCGC 8 cut(s) 338, 350, 431, 492, 664, 730, 1047, 1223
BstKTI GATC 2 cut(s) 333, 425
BstMAI GTCTC 2 cut(s) 627, 1399
BstMBI GATC 2 cut(s) 330, 422
BstNI CCWGG 4 cut(s) 220, 454, 1169, 1237
BstNSI RCATGY 3 cut(s) 605, 1230, 1321
BstSCI CCNGG 4 cut(s) 218, 452, 1167, 1235
BstSLI GKGCMC 1 cut(s) 1305
BstUI CGCG 2 cut(s) 1045, 1047
BstV1I GCAGC 9 cut(s) 16, 333, 367, 370, 389, 595, 617, 642, 737
BstV2I GAAGAC 2 cut(s) 271, 1146
BstXI CCANNNNNNTGG 1 cut(s) 541
Bsu15I ATCGAT 1 cut(s) 900
Bsu36I CCTNAGG 1 cut(s) 642
BsuI GTATCC 1 cut(s) 1028
BsuRI GGCC 8 cut(s) 213, 224, 734, 745, 1076, 1179, 1205, 1303
BsuTUI ATCGAT 1 cut(s) 900
BtgI CCRYGG 1 cut(s) 1347
BtsCI GGATG 2 cut(s) 152, 895
BtsI GCAGTG 1 cut(s) 596
BtsIMutI CAGTG 3 cut(s) 596, 774, 1033
BveI ACCTGC 2 cut(s) 939, 953
Cac8I GCNNGC 4 cut(s) 326, 603, 660, 732
CaiI CAGNNNCTG 2 cut(s) 383, 968
CciI TCATGA 2 cut(s) 411, 1131
CfoI GCGC 8 cut(s) 338, 350, 431, 492, 664, 730, 1047, 1223
Cfr10I RCCGGY 2 cut(s) 338, 730
Cfr13I GGNCC 7 cut(s) 212, 222, 449, 733, 744, 1301, 1302
ClaI ATCGAT 1 cut(s) 900
CseI GACGC 2 cut(s) 1051, 1391
Csp6I GTAC 1 cut(s) 1162
CviQI GTAC 1 cut(s) 1162
DdeI CTNAG 4 cut(s) 52, 642, 938, 999
DinI GGCGCC 1 cut(s) 430
DpnI GATC 2 cut(s) 332, 424
DpnII GATC 2 cut(s) 330, 422
DrdI GACNNNNNNGTC 3 cut(s) 275, 1336, 1373
DseDI GACNNNNNNGTC 3 cut(s) 275, 1336, 1373
EaeI YGGCCR 1 cut(s) 1203
Eam1104I CTCTTC 1 cut(s) 757
EarI CTCTTC 1 cut(s) 757
EciI GGCGGA 4 cut(s) 157, 286, 349, 1141
Ecl136II GAGCTC 2 cut(s) 847, 1056
Eco130I CCWWGG 2 cut(s) 740, 1347
Eco147I AGGCCT 1 cut(s) 1179
Eco24I GRGCYC 4 cut(s) 849, 1058, 1151, 1305
Eco31I GGTCTC 1 cut(s) 627
Eco47I GGWCC 1 cut(s) 449
Eco47III AGCGCT 1 cut(s) 491
Eco53kI GAGCTC 2 cut(s) 847, 1056
Eco81I CCTNAGG 1 cut(s) 642
Eco88I CYCGRG 1 cut(s) 188
EcoICRI GAGCTC 2 cut(s) 847, 1056
EcoNI CCTNNNNNAGG 1 cut(s) 645
EcoO109I RGGNCCY 1 cut(s) 1302
EcoRII CCWGG 4 cut(s) 218, 452, 1167, 1235
EcoT14I CCWWGG 2 cut(s) 740, 1347
EcoT22I ATGCAT 1 cut(s) 129
EcoT38I GRGCYC 4 cut(s) 849, 1058, 1151, 1305
EgeI GGCGCC 1 cut(s) 430
EheI GGCGCC 1 cut(s) 430
ErhI CCWWGG 2 cut(s) 740, 1347
Esp3I CGTCTC 1 cut(s) 1399
FaqI GGGAC 3 cut(s) 435, 1054, 1265
FauI CCCGC 3 cut(s) 252, 700, 1031
FokI GGATG 2 cut(s) 139, 902
FriOI GRGCYC 4 cut(s) 849, 1058, 1151, 1305
FspBI CTAG 2 cut(s) 698, 741
GlaI GCGC 8 cut(s) 337, 349, 430, 491, 663, 729, 1046, 1222
GsaI CCCAGC 2 cut(s) 723, 1317
GsuI CTGGAG 5 cut(s) 383, 902, 1151, 1201, 1219
HaeII RGCGCY 6 cut(s) 339, 351, 432, 493, 731, 1224
HaeIII GGCC 8 cut(s) 213, 224, 734, 745, 1076, 1179, 1205, 1303
HapII CCGG 5 cut(s) 339, 345, 441, 704, 731
HgaI GACGC 2 cut(s) 1051, 1391
HhaI GCGC 8 cut(s) 338, 350, 431, 492, 664, 730, 1047, 1223
Hin1I GRCGYC 3 cut(s) 429, 504, 1383
Hin6I GCGC 8 cut(s) 336, 348, 429, 490, 662, 728, 1045, 1221
HinP1I GCGC 8 cut(s) 336, 348, 429, 490, 662, 728, 1045, 1221
HincII GTYRAC 1 cut(s) 1366
HindII GTYRAC 1 cut(s) 1366
HinfI GANTC 4 cut(s) 164, 293, 437, 750
HpaII CCGG 5 cut(s) 339, 345, 441, 704, 731
HphI GGTGA 6 cut(s) 560, 626, 703, 1022, 1117, 1307
Hpy166II GTNNAC 2 cut(s) 694, 1366
Hpy188I TCNGA 2 cut(s) 939, 1000
Hpy188III TCNNGA 3 cut(s) 412, 420, 1132
Hpy8I GTNNAC 2 cut(s) 694, 1366
Hpy99I CGWCG 5 cut(s) 239, 293, 506, 509, 515
HpyAV CCTTC 3 cut(s) 532, 826, 1129
HpyCH4III ACNGT 5 cut(s) 1105, 1292, 1333, 1358, 1370
HpyCH4IV ACGT 1 cut(s) 504
HpyF3I CTNAG 4 cut(s) 52, 642, 938, 999
HpySE526I ACGT 1 cut(s) 504
Hsp92I GRCGYC 3 cut(s) 429, 504, 1383
HspAI GCGC 8 cut(s) 336, 348, 429, 490, 662, 728, 1045, 1221
KasI GGCGCC 1 cut(s) 428
KroI GCCGGC 1 cut(s) 730
KroNI GCCGGC 1 cut(s) 732
Kzo9I GATC 2 cut(s) 330, 422
LmnI GCTCC 8 cut(s) 402, 497, 521, 706, 927, 979, 1053, 1154
Lsp1109I GCAGC 9 cut(s) 16, 333, 367, 370, 389, 595, 617, 642, 737
LweI GCATC 7 cut(s) 114, 136, 161, 229, 377, 384, 602
MaeI CTAG 2 cut(s) 698, 741
MaeII ACGT 1 cut(s) 504
MaeIII GTNAC 4 cut(s) 1105, 1229, 1295, 1352
MalI GATC 2 cut(s) 332, 424
MbiI CCGCTC 1 cut(s) 253
MboI GATC 2 cut(s) 330, 422
MboII GAAGA 4 cut(s) 271, 552, 774, 1151
MhlI GDGCHC 4 cut(s) 849, 1058, 1151, 1305
MlsI TGGCCA 1 cut(s) 1205
MluCI AATT 5 cut(s) 135, 613, 628, 816, 911
MluNI TGGCCA 1 cut(s) 1205
Mly113I GGCGCC 1 cut(s) 429
MlyI GAGTC 4 cut(s) 158, 287, 431, 759
MmeI TCCRAC 5 cut(s) 121, 164, 285, 519, 1311
Mox20I TGGCCA 1 cut(s) 1205
Mph1103I ATGCAT 1 cut(s) 129
MroNI GCCGGC 1 cut(s) 730
MscI TGGCCA 1 cut(s) 1205
MslI CAYNNNNRTG 2 cut(s) 1103, 1322
Msp20I TGGCCA 1 cut(s) 1205
MspA1I CMGCKG 3 cut(s) 380, 608, 655
MspI CCGG 5 cut(s) 339, 345, 441, 704, 731
MspR9I CCNGG 4 cut(s) 220, 454, 1169, 1237
MvaI CCWGG 4 cut(s) 220, 454, 1169, 1237
MvnI CGCG 2 cut(s) 1045, 1047
NaeI GCCGGC 1 cut(s) 732
NarI GGCGCC 1 cut(s) 429
NcoI CCATGG 1 cut(s) 1347
NdeII GATC 2 cut(s) 330, 422
NgoMIV GCCGGC 1 cut(s) 730
NlaIV GGNNCC 9 cut(s) 214, 343, 430, 451, 517, 1150, 1241, 1303, 1372
NmeAIII GCCGAG 2 cut(s) 189, 695
NmuCI GTSAC 3 cut(s) 1105, 1229, 1295
NsiI ATGCAT 1 cut(s) 129
NspI RCATGY 3 cut(s) 605, 1230, 1321
PaeI GCATGC 1 cut(s) 605
PaeR7I CTCGAG 1 cut(s) 188
PagI TCATGA 2 cut(s) 411, 1131
PaqCI CACCTGC 1 cut(s) 953
PasI CCCWGGG 1 cut(s) 453
PceI AGGCCT 1 cut(s) 1179
PciI ACATGT 1 cut(s) 1226
PcsI WCGNNNNNNNCGW 2 cut(s) 507, 1389
PdiI GCCGGC 1 cut(s) 732
PflFI GACNNNGTC 1 cut(s) 272
PfoI TCCNGGA 1 cut(s) 1235
PleI GAGTC 4 cut(s) 158, 287, 431, 758
PluTI GGCGCC 1 cut(s) 432
PpsI GAGTC 4 cut(s) 158, 287, 431, 758
PscI ACATGT 1 cut(s) 1226
Psp124BI GAGCTC 2 cut(s) 849, 1058
Psp6I CCWGG 4 cut(s) 218, 452, 1167, 1235
PspFI CCCAGC 2 cut(s) 719, 1313
PspGI CCWGG 4 cut(s) 218, 452, 1167, 1235
PspN4I GGNNCC 9 cut(s) 214, 343, 430, 451, 517, 1150, 1241, 1303, 1372
PspOMI GGGCCC 1 cut(s) 1301
PspPI GGNCC 7 cut(s) 212, 222, 449, 733, 744, 1301, 1302
PspXI VCTCGAGB 1 cut(s) 188
PstNI CAGNNNCTG 2 cut(s) 383, 968
PsyI GACNNNGTC 1 cut(s) 272
PvuII CAGCTG 3 cut(s) 380, 608, 655
RsaI GTAC 1 cut(s) 1163
RsaNI GTAC 1 cut(s) 1162
RseI CAYNNNNRTG 2 cut(s) 1103, 1322
SacI GAGCTC 2 cut(s) 849, 1058
Sau3AI GATC 2 cut(s) 330, 422
Sau96I GGNCC 7 cut(s) 212, 222, 449, 733, 744, 1301, 1302
SchI GAGTC 4 cut(s) 158, 287, 431, 759
ScrFI CCNGG 4 cut(s) 220, 454, 1169, 1237
SduI GDGCHC 4 cut(s) 849, 1058, 1151, 1305
SfaNI GCATC 7 cut(s) 114, 136, 161, 229, 377, 384, 602
SfoI GGCGCC 1 cut(s) 430
Sfr274I CTCGAG 1 cut(s) 188
SinI GGWCC 1 cut(s) 449
SlaI CTCGAG 1 cut(s) 188
SmiMI CAYNNNNRTG 2 cut(s) 1103, 1322
SmlI CTYRAG 1 cut(s) 188
SmoI CTYRAG 1 cut(s) 188
SphI GCATGC 1 cut(s) 605
Sse9I AATT 5 cut(s) 135, 613, 628, 816, 911
SseBI AGGCCT 1 cut(s) 1179
SspDI GGCGCC 1 cut(s) 428
SspMI CTAG 2 cut(s) 698, 741
SstI GAGCTC 2 cut(s) 849, 1058
StuI AGGCCT 1 cut(s) 1179
StyD4I CCNGG 4 cut(s) 218, 452, 1167, 1235
StyI CCWWGG 2 cut(s) 740, 1347
TaaI ACNGT 5 cut(s) 1105, 1292, 1333, 1358, 1370
TaiI ACGT 1 cut(s) 507
TaqI TCGA 3 cut(s) 162, 189, 900
TaqII GACCGA 1 cut(s) 609
TasI AATT 5 cut(s) 135, 613, 628, 816, 911
TauI GCSGC 6 cut(s) 233, 311, 377, 389, 434, 689
TscAI CASTG 3 cut(s) 603, 781, 1033
TseFI GTSAC 3 cut(s) 1105, 1229, 1295
TseI GCWGC 9 cut(s) 4, 321, 377, 380, 383, 605, 608, 655, 725
Tsp45I GTSAC 3 cut(s) 1105, 1229, 1295
TspDTI ATGAA 3 cut(s) 47, 845, 1148
TspGWI ACGGA 7 cut(s) 687, 820, 1066, 1124, 1312, 1363, 1381
TspRI CASTG 3 cut(s) 603, 781, 1033
Tth111I GACNNNGTC 1 cut(s) 272
VpaK11BI GGWCC 1 cut(s) 449
XagI CCTNNNNNAGG 1 cut(s) 645
XapI RAATTY 3 cut(s) 135, 628, 911
XceI RCATGY 3 cut(s) 605, 1230, 1321
XhoI CTCGAG 1 cut(s) 188
XmaJI CCTAGG 1 cut(s) 740
XspI CTAG 2 cut(s) 698, 741
ZraI GACGTC 1 cut(s) 505
Zsp2I ATGCAT 1 cut(s) 129
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.