Rw2G001180

Transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0009533
Physical Location & Seq
Reverse (-)
1004650 .. 1008177
3528 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G001180.1

Sequence Viewer

Length: 1101 bp
ATGTCGTCTTCTCTTACGACGACTCTTCCAACCTCGCCTCCAAGTTCCGCAGCCACCAGATCAGCCGGCGCCGCCGCGTCCAAGTCCTCCCCCACTGCCTCGGCCGCAGCCGCCGCAGCCATGATGCTCCAGCACCAGCTCATGATGTCCCGTGGCGGCTCCTCCTCCTCCGGCAACGGCGCTCCGATGGGGTTGTCGTTGGGGAGCAACGGTGACTTCAACGATGTTGGTGACGGCTCGTCGTTTAAATCTCCTAATCCGGGCGGTGGTGACGGTGGTTCTTCTGTTCAGGCCTTGTTTAATGGCTTTACTGGTTCTCTGTCTCCGAACCAGCCTCAGCATTTTCATCACCATCAGGGGGGTGCACTTCAAGCGCAGAACTATGGAGCTCAAGCCGCAGCCATGACCCAACCTCCGGCGAACGGCTCGGCCGGAGCTTCGGCTGCGCAACCCAGGCCCAGAGTCAGGGCCAGGCGAGGTCAAGCCACTGACCCACACTCCATCGCTGAAAGATTACGAAGAGAGAGAATTGCAGAGAGAATGAAAGCCCTGCAGGAGCTGGTTCCCAATGCCAACAAGACAGATAAGGCTTCAATGCTAGATGAGATCATCGATTATGTAAAGTTCCTGCAGCTCCAAGTCAAGGTTCTGAGCATGAGCAGGTTGGGTGGTGCTGGTGCTGTTGCTCCCCTTGTCACTGATATGTCCTCTGAGGGAGGCGGTGACTGTATCCAGACCAGTGCCAACGGCGGGACCCGCGGCAAAAACCAAACGGCGTCGTCCAACGACAGCATGACGGTGACGGAGCACCAGGTGGCCAAGCTCATGGAGGAGGACATGGGCTCCGCCATGCAGTACCTACAGGGCAAAGGTCTCTGCCTCATGCCTATTTCCTTGGCCACGGCTATCTCCACCGCCACGTGTCACCCCCGGAACCCACTGATGAATGGCAACAGCCACCACCCGGTCATTACATCCAACGGCGGAGAGGGGCCGTCGTCTCCCAGCATGTCCGTGTTGACCGTCCAGTCAGCCACGATGGCCAGTAACTGCGGCGTTGACGGTTCCGGTAAAGACGCCGCCTCCGTCTCCAAGCCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000976 GO:0000981 GO:0001046 GO:0001047 GO:0001067 GO:0001228 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0007275 GO:0007276 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009555 GO:0009653 GO:0009888 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016049 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019953 GO:0021700 GO:0022412 GO:0022414 GO:0022622 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0032504 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0040007 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0044703 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048229 GO:0048232 GO:0048235 GO:0048364 GO:0048468 GO:0048469 GO:0048518 GO:0048522 GO:0048588 GO:0048589 GO:0048609 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051704 GO:0055046 GO:0060255 GO:0060560 GO:0065007 GO:0071695 GO:0071704 GO:0080090 GO:0080147 GO:0090304 GO:0090558 GO:0090627 GO:0097159 GO:0097659 GO:0099402 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:1905392 GO:1990837 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HLH

Protein Analysis

366

Amino Acids

37.15

Weight (kDa)

8.69

Isoelectric Point (pI)

46.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HLH PF00010 166 - 211 6e-10 Helix-loop-helix DNA-binding domain
bHLH_SAC51 PF23173 170 - 214 1.6e-06 Transcription factor SAC51 bHLH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1027
Acc16I TGCGCA 1 cut(s) 447
Acc36I ACCTGC 1 cut(s) 651
AccB1I GGYRCC 1 cut(s) 68
AccII CGCG 2 cut(s) 77, 759
AcoI YGGCCR 5 cut(s) 102, 429, 816, 897, 1041
AcvI CACGTG 1 cut(s) 921
AcyI GRCGYC 3 cut(s) 69, 776, 1077
AdeI CACNNNGTG 1 cut(s) 814
AfaI GTAC 1 cut(s) 857
AfiI CCNNNNNNNGG 9 cut(s) 260, 266, 358, 415, 422, 465, 643, 750, 964
AflIII ACRYGT 1 cut(s) 920
AgsI TTSAA 3 cut(s) 220, 371, 594
AhdI GACNNNNNGTC 1 cut(s) 238
AjnI CCWGG 3 cut(s) 452, 470, 810
AjuI GAANNNNNNNTTGG 2 cut(s) 630, 662
AluBI AGCT 6 cut(s) 139, 389, 437, 559, 634, 823
AluI AGCT 6 cut(s) 139, 389, 437, 559, 634, 823
Alw21I GWGCWC 3 cut(s) 367, 391, 810
Alw26I GTCTC 4 cut(s) 327, 878, 1005, 1093
Alw44I GTGCAC 1 cut(s) 363
AlwNI CAGNNNCTG 2 cut(s) 559, 1050
AoxI GGCC 9 cut(s) 102, 291, 429, 455, 468, 816, 897, 992, 1041
ApaLI GTGCAC 1 cut(s) 363
ApeKI GCWGC 6 cut(s) 50, 107, 116, 398, 443, 631
AspLEI GCGC 4 cut(s) 71, 182, 376, 448
AspS9I GGNCC 4 cut(s) 456, 468, 753, 992
AsuC2I CCSGG 3 cut(s) 261, 931, 965
AsuHPI GGTGA 7 cut(s) 224, 242, 281, 341, 734, 811, 917
AvaII GGWCC 1 cut(s) 753
BaeGI GKGCMC 1 cut(s) 367
BalI TGGCCA 3 cut(s) 818, 899, 1043
BanI GGYRCC 1 cut(s) 68
BanII GRGCYC 2 cut(s) 391, 845
BbrPI CACGTG 1 cut(s) 921
Bbv12I GWGCWC 3 cut(s) 367, 391, 810
BbvCI CCTCAGC 1 cut(s) 336
BbvI GCAGC 6 cut(s) 62, 119, 128, 410, 430, 643
BccI CCATC 4 cut(s) 181, 360, 509, 1033
BceAI ACGGC 9 cut(s) 193, 250, 439, 763, 789, 918, 979, 997, 1081
BciT130I CCWGG 3 cut(s) 454, 472, 812
BciVI GTATCC 1 cut(s) 740
BcnI CCSGG 3 cut(s) 261, 931, 965
BcoDI GTCTC 4 cut(s) 327, 878, 1005, 1093
BfaI CTAG 1 cut(s) 599
BfmI CTRYAG 3 cut(s) 551, 629, 860
BfoI RGCGCY 2 cut(s) 72, 183
BfuAI ACCTGC 1 cut(s) 651
BfuI GTATCC 1 cut(s) 740
BglI GCCNNNNNGGC 1 cut(s) 1040
Bme1390I CCNGG 6 cut(s) 261, 454, 472, 812, 931, 965
Bme18I GGWCC 1 cut(s) 753
BmeRI GACNNNNNGTC 1 cut(s) 238
BmgT120I GGNCC 4 cut(s) 456, 468, 753, 992
BmiI GGNNCC 9 cut(s) 70, 160, 564, 754, 755, 844, 935, 993, 1066
BmrFI CCNGG 6 cut(s) 261, 454, 472, 812, 931, 965
BmsI GCATC 1 cut(s) 114
BpmI CTGGAG 1 cut(s) 113
Bpu10I CCTNAGC 1 cut(s) 336
BpuEI CTTGAG 1 cut(s) 375
BpuMI CCSGG 3 cut(s) 261, 931, 965
Bsa29I ATCGAT 1 cut(s) 612
BsaAI YACGTR 1 cut(s) 921
BsaHI GRCGYC 3 cut(s) 69, 776, 1077
BsaI GGTCTC 1 cut(s) 878
BsaJI CCNNGG 7 cut(s) 99, 151, 452, 757, 894, 900, 929
BsaWI WCCGGW 1 cut(s) 1067
Bsc4I CCNNNNNNNGG 9 cut(s) 260, 266, 358, 415, 422, 465, 643, 750, 964
Bse118I RCCGGY 1 cut(s) 65
Bse1I ACTGG 4 cut(s) 316, 738, 1027, 1044
BseBI CCWGG 3 cut(s) 454, 472, 812
BseCI ATCGAT 1 cut(s) 612
BseDI CCNNGG 7 cut(s) 99, 151, 452, 757, 894, 900, 929
BseGI GGATG 1 cut(s) 974
BseLI CCNNNNNNNGG 9 cut(s) 260, 266, 358, 415, 422, 465, 643, 750, 964
BseMII CTCAG 3 cut(s) 350, 641, 702
BseNI ACTGG 4 cut(s) 316, 738, 1027, 1044
BseRI GAGGAG 4 cut(s) 151, 154, 157, 845
BseSI GKGCMC 1 cut(s) 367
BseX3I CGGCCG 2 cut(s) 102, 429
BseXI GCAGC 6 cut(s) 62, 119, 128, 410, 430, 643
BseYI CCCAGC 1 cut(s) 1004
Bsh1236I CGCG 2 cut(s) 77, 759
Bsh1285I CGRYCG 2 cut(s) 105, 432
BshFI GGCC 9 cut(s) 104, 293, 431, 457, 470, 818, 899, 994, 1043
BshNI GGYRCC 1 cut(s) 68
BshVI ATCGAT 1 cut(s) 612
BsiEI CGRYCG 2 cut(s) 105, 432
BsiHKAI GWGCWC 3 cut(s) 367, 391, 810
BsiSI CCGG 8 cut(s) 66, 171, 260, 416, 432, 931, 965, 1068
BslFI GGGAC 2 cut(s) 133, 766
BslI CCNNNNNNNGG 9 cut(s) 260, 266, 358, 415, 422, 465, 643, 750, 964
BsmAI GTCTC 4 cut(s) 327, 878, 1005, 1093
BsmBI CGTCTC 2 cut(s) 1005, 1093
BsmFI GGGAC 2 cut(s) 133, 766
BsnI GGCC 9 cut(s) 104, 293, 431, 457, 470, 818, 899, 994, 1043
Bso31I GGTCTC 1 cut(s) 878
Bsp1286I GDGCHC 4 cut(s) 367, 391, 810, 845
Bsp143I GATC 2 cut(s) 59, 606
BspANI GGCC 9 cut(s) 104, 293, 431, 457, 470, 818, 899, 994, 1043
BspCNI CTCAG 3 cut(s) 349, 642, 703
BspDI ATCGAT 1 cut(s) 612
BspFNI CGCG 2 cut(s) 77, 759
BspHI TCATGA 1 cut(s) 141
BspLI GGNNCC 9 cut(s) 70, 160, 564, 754, 755, 844, 935, 993, 1066
BspMAI CTGCAG 2 cut(s) 555, 633
BspMI ACCTGC 1 cut(s) 651
BspT107I GGYRCC 1 cut(s) 68
BspTNI GGTCTC 1 cut(s) 878
BsrFI RCCGGY 1 cut(s) 65
BsrI ACTGG 4 cut(s) 316, 738, 1027, 1044
BssAI RCCGGY 1 cut(s) 65
BssECI CCNNGG 7 cut(s) 99, 151, 452, 757, 894, 900, 929
BssMI GATC 2 cut(s) 59, 606
BssNI GRCGYC 3 cut(s) 69, 776, 1077
BssT1I CCWWGG 1 cut(s) 894
Bst2UI CCWGG 3 cut(s) 454, 472, 812
Bst4CI ACNGT 6 cut(s) 212, 275, 728, 799, 1024, 1064
Bst6I CTCTTC 2 cut(s) 30, 514
BstACI GRCGYC 3 cut(s) 69, 776, 1077
BstBAI YACGTR 1 cut(s) 921
BstC8I GCNNGC 1 cut(s) 67
BstDEI CTNAG 3 cut(s) 336, 650, 711
BstDSI CCRYGG 3 cut(s) 151, 757, 900
BstF5I GGATG 1 cut(s) 974
BstFNI CGCG 2 cut(s) 77, 759
BstH2I RGCGCY 2 cut(s) 72, 183
BstHHI GCGC 4 cut(s) 71, 182, 376, 448
BstKTI GATC 2 cut(s) 62, 609
BstMAI GTCTC 4 cut(s) 327, 878, 1005, 1093
BstMBI GATC 2 cut(s) 59, 606
BstMCI CGRYCG 2 cut(s) 105, 432
BstNI CCWGG 3 cut(s) 454, 472, 812
BstNSI RCATGY 1 cut(s) 1012
BstSCI CCNGG 6 cut(s) 259, 452, 470, 810, 929, 963
BstSFI CTRYAG 3 cut(s) 551, 629, 860
BstSLI GKGCMC 1 cut(s) 367
BstUI CGCG 2 cut(s) 77, 759
BstV1I GCAGC 6 cut(s) 62, 119, 128, 410, 430, 643
BstXI CCANNNNNNTGG 1 cut(s) 826
BstZI CGGCCG 2 cut(s) 102, 429
Bsu15I ATCGAT 1 cut(s) 612
BsuI GTATCC 1 cut(s) 740
BsuRI GGCC 9 cut(s) 104, 293, 431, 457, 470, 818, 899, 994, 1043
BsuTUI ATCGAT 1 cut(s) 612
BtgI CCRYGG 3 cut(s) 151, 757, 900
BtgZI GCGATG 1 cut(s) 487
BtsCI GGATG 1 cut(s) 974
BtsI GCAGTG 1 cut(s) 93
BtsIMutI CAGTG 5 cut(s) 93, 486, 696, 745, 938
BveI ACCTGC 1 cut(s) 651
Cac8I GCNNGC 1 cut(s) 67
CaiI CAGNNNCTG 2 cut(s) 559, 1050
CciI TCATGA 1 cut(s) 141
CfoI GCGC 4 cut(s) 71, 182, 376, 448
Cfr10I RCCGGY 1 cut(s) 65
Cfr13I GGNCC 4 cut(s) 456, 468, 753, 992
Cfr42I CCGCGG 1 cut(s) 760
ClaI ATCGAT 1 cut(s) 612
CseI GACGC 3 cut(s) 66, 765, 1085
CsiI ACCWGGT 1 cut(s) 810
Csp6I GTAC 1 cut(s) 856
CviQI GTAC 1 cut(s) 856
DdeI CTNAG 3 cut(s) 336, 650, 711
DinI GGCGCC 1 cut(s) 70
DpnI GATC 2 cut(s) 61, 608
DpnII GATC 2 cut(s) 59, 606
DraI TTTAAA 1 cut(s) 247
DraIII CACNNNGTG 1 cut(s) 814
DrdI GACNNNNNNGTC 1 cut(s) 1027
DriI GACNNNNNGTC 1 cut(s) 238
DseDI GACNNNNNNGTC 1 cut(s) 1027
EaeI YGGCCR 5 cut(s) 102, 429, 816, 897, 1041
EagI CGGCCG 2 cut(s) 102, 429
Eam1104I CTCTTC 2 cut(s) 30, 514
Eam1105I GACNNNNNGTC 1 cut(s) 238
EarI CTCTTC 2 cut(s) 30, 514
EciI GGCGGA 2 cut(s) 835, 999
Ecl136II GAGCTC 1 cut(s) 389
EclXI CGGCCG 2 cut(s) 102, 429
Eco130I CCWWGG 1 cut(s) 894
Eco147I AGGCCT 1 cut(s) 293
Eco24I GRGCYC 2 cut(s) 391, 845
Eco31I GGTCTC 1 cut(s) 878
Eco47I GGWCC 1 cut(s) 753
Eco52I CGGCCG 2 cut(s) 102, 429
Eco53kI GAGCTC 1 cut(s) 389
Eco72I CACGTG 1 cut(s) 921
EcoICRI GAGCTC 1 cut(s) 389
EcoO109I RGGNCCY 1 cut(s) 753
EcoRII CCWGG 3 cut(s) 452, 470, 810
EcoT14I CCWWGG 1 cut(s) 894
EcoT38I GRGCYC 2 cut(s) 391, 845
EgeI GGCGCC 1 cut(s) 70
EheI GGCGCC 1 cut(s) 70
ErhI CCWWGG 1 cut(s) 894
Esp3I CGTCTC 2 cut(s) 1005, 1093
FaqI GGGAC 2 cut(s) 133, 766
FauI CCCGC 2 cut(s) 743, 764
FokI GGATG 1 cut(s) 961
FriOI GRGCYC 2 cut(s) 391, 845
FspBI CTAG 1 cut(s) 599
FspI TGCGCA 1 cut(s) 447
GlaI GCGC 4 cut(s) 70, 181, 375, 447
GsaI CCCAGC 1 cut(s) 1008
GsuI CTGGAG 1 cut(s) 113
HaeII RGCGCY 2 cut(s) 72, 183
HaeIII GGCC 9 cut(s) 104, 293, 431, 457, 470, 818, 899, 994, 1043
HapII CCGG 8 cut(s) 66, 171, 260, 416, 432, 931, 965, 1068
HgaI GACGC 3 cut(s) 66, 765, 1085
HhaI GCGC 4 cut(s) 71, 182, 376, 448
Hin1I GRCGYC 3 cut(s) 69, 776, 1077
Hin6I GCGC 4 cut(s) 69, 180, 374, 446
HinP1I GCGC 4 cut(s) 69, 180, 374, 446
HincII GTYRAC 2 cut(s) 1020, 1060
HindII GTYRAC 2 cut(s) 1020, 1060
HinfI GANTC 2 cut(s) 22, 462
HpaII CCGG 8 cut(s) 66, 171, 260, 416, 432, 931, 965, 1068
HphI GGTGA 7 cut(s) 224, 242, 281, 341, 734, 811, 917
Hpy166II GTNNAC 3 cut(s) 365, 1020, 1060
Hpy188I TCNGA 4 cut(s) 186, 327, 651, 712
Hpy188III TCNNGA 2 cut(s) 142, 733
Hpy8I GTNNAC 3 cut(s) 365, 1020, 1060
Hpy99I CGWCG 4 cut(s) 22, 244, 781, 1000
HpyCH4III ACNGT 6 cut(s) 212, 275, 728, 799, 1024, 1064
HpyCH4IV ACGT 1 cut(s) 920
HpyCH4V TGCA 5 cut(s) 365, 533, 553, 631, 853
HpyF3I CTNAG 3 cut(s) 336, 650, 711
HpySE526I ACGT 1 cut(s) 920
Hsp92I GRCGYC 3 cut(s) 69, 776, 1077
HspAI GCGC 4 cut(s) 69, 180, 374, 446
KasI GGCGCC 1 cut(s) 68
KflI GGGWCCC 1 cut(s) 753
KroI GCCGGC 1 cut(s) 65
KroNI GCCGGC 1 cut(s) 67
KspI CCGCGG 1 cut(s) 760
Kzo9I GATC 2 cut(s) 59, 606
Lsp1109I GCAGC 6 cut(s) 62, 119, 128, 410, 430, 643
LweI GCATC 1 cut(s) 114
MabI ACCWGGT 1 cut(s) 810
MaeI CTAG 1 cut(s) 599
MaeII ACGT 1 cut(s) 920
MaeIII GTNAC 8 cut(s) 212, 230, 269, 694, 722, 799, 923, 1046
MalI GATC 2 cut(s) 61, 608
MboI GATC 2 cut(s) 59, 606
MboII GAAGA 3 cut(s) 17, 273, 531
MhlI GDGCHC 4 cut(s) 367, 391, 810, 845
MlsI TGGCCA 3 cut(s) 818, 899, 1043
MluCI AATT 1 cut(s) 528
MluNI TGGCCA 3 cut(s) 818, 899, 1043
Mly113I GGCGCC 1 cut(s) 69
MlyI GAGTC 2 cut(s) 16, 471
MmeI TCCRAC 3 cut(s) 53, 807, 1002
Mox20I TGGCCA 3 cut(s) 818, 899, 1043
MroNI GCCGGC 1 cut(s) 65
MscI TGGCCA 3 cut(s) 818, 899, 1043
MseI TTAA 2 cut(s) 246, 300
MslI CAYNNNNRTG 3 cut(s) 701, 797, 1013
Msp20I TGGCCA 3 cut(s) 818, 899, 1043
MspA1I CMGCKG 1 cut(s) 759
MspI CCGG 8 cut(s) 66, 171, 260, 416, 432, 931, 965, 1068
MspR9I CCNGG 6 cut(s) 261, 454, 472, 812, 931, 965
MvaI CCWGG 3 cut(s) 454, 472, 812
MvnI CGCG 2 cut(s) 77, 759
NaeI GCCGGC 1 cut(s) 67
NarI GGCGCC 1 cut(s) 69
NciI CCSGG 3 cut(s) 261, 931, 965
NdeII GATC 2 cut(s) 59, 606
NgoMIV GCCGGC 1 cut(s) 65
NlaIV GGNNCC 9 cut(s) 70, 160, 564, 754, 755, 844, 935, 993, 1066
NmeAIII GCCGAG 2 cut(s) 80, 407
NmuCI GTSAC 7 cut(s) 212, 230, 269, 694, 722, 799, 923
NsbI TGCGCA 1 cut(s) 447
NspI RCATGY 1 cut(s) 1012
PagI TCATGA 1 cut(s) 141
PceI AGGCCT 1 cut(s) 293
PcsI WCGNNNNNNNCGW 1 cut(s) 1083
PdiI GCCGGC 1 cut(s) 67
PleI GAGTC 2 cut(s) 16, 470
PluTI GGCGCC 1 cut(s) 72
PmaCI CACGTG 1 cut(s) 921
PmlI CACGTG 1 cut(s) 921
PpsI GAGTC 2 cut(s) 16, 470
Ppu21I YACGTR 1 cut(s) 921
PpuMI RGGWCCY 1 cut(s) 753
Psp124BI GAGCTC 1 cut(s) 391
Psp5II RGGWCCY 1 cut(s) 753
Psp6I CCWGG 3 cut(s) 452, 470, 810
PspCI CACGTG 1 cut(s) 921
PspFI CCCAGC 1 cut(s) 1004
PspGI CCWGG 3 cut(s) 452, 470, 810
PspN4I GGNNCC 9 cut(s) 70, 160, 564, 754, 755, 844, 935, 993, 1066
PspPI GGNCC 4 cut(s) 456, 468, 753, 992
PspPPI RGGWCCY 1 cut(s) 753
PstI CTGCAG 2 cut(s) 555, 633
PstNI CAGNNNCTG 2 cut(s) 559, 1050
RsaI GTAC 1 cut(s) 857
RsaNI GTAC 1 cut(s) 856
RseI CAYNNNNRTG 3 cut(s) 701, 797, 1013
SacI GAGCTC 1 cut(s) 391
SacII CCGCGG 1 cut(s) 760
SaqAI TTAA 2 cut(s) 246, 300
Sau3AI GATC 2 cut(s) 59, 606
Sau96I GGNCC 4 cut(s) 456, 468, 753, 992
SbfI CCTGCAGG 1 cut(s) 555
SchI GAGTC 2 cut(s) 16, 471
ScrFI CCNGG 6 cut(s) 261, 454, 472, 812, 931, 965
SdaI CCTGCAGG 1 cut(s) 555
SduI GDGCHC 4 cut(s) 367, 391, 810, 845
SexAI ACCWGGT 1 cut(s) 810
SfaNI GCATC 1 cut(s) 114
SfcI CTRYAG 3 cut(s) 551, 629, 860
SfoI GGCGCC 1 cut(s) 70
Sfr303I CCGCGG 1 cut(s) 760
SgrBI CCGCGG 1 cut(s) 760
SinI GGWCC 1 cut(s) 753
SmiMI CAYNNNNRTG 3 cut(s) 701, 797, 1013
SmlI CTYRAG 1 cut(s) 390
SmoI CTYRAG 1 cut(s) 390
Sse8387I CCTGCAGG 1 cut(s) 555
Sse9I AATT 1 cut(s) 528
SseBI AGGCCT 1 cut(s) 293
SspDI GGCGCC 1 cut(s) 68
SspMI CTAG 1 cut(s) 599
SstI GAGCTC 1 cut(s) 391
StuI AGGCCT 1 cut(s) 293
StyD4I CCNGG 6 cut(s) 259, 452, 470, 810, 929, 963
StyI CCWWGG 1 cut(s) 894
TaaI ACNGT 6 cut(s) 212, 275, 728, 799, 1024, 1064
TaiI ACGT 1 cut(s) 923
TaqI TCGA 1 cut(s) 612
TasI AATT 1 cut(s) 528
Tru1I TTAA 2 cut(s) 246, 300
Tru9I TTAA 2 cut(s) 246, 300
TscAI CASTG 5 cut(s) 100, 493, 703, 745, 945
TseFI GTSAC 7 cut(s) 212, 230, 269, 694, 722, 799, 923
TseI GCWGC 6 cut(s) 50, 107, 116, 398, 443, 631
Tsp45I GTSAC 7 cut(s) 212, 230, 269, 694, 722, 799, 923
TspDTI ATGAA 3 cut(s) 335, 557, 959
TspGWI ACGGA 3 cut(s) 818, 1003, 1075
TspRI CASTG 5 cut(s) 100, 493, 703, 745, 945
VneI GTGCAC 1 cut(s) 363
VpaK11BI GGWCC 1 cut(s) 753
XceI RCATGY 1 cut(s) 1012
XspI CTAG 1 cut(s) 599
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.