RchiOBHm_Chr2g0085911

Transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0009533
Physical Location & Seq
Reverse (-)
1179210 .. 1182817
3608 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ46144

Sequence Viewer

Length: 1263 bp
ATGAACTCTCTGCTAAACCCCCAGACGCCGTTCGACTCCTCCGCCCACGACGACTTCCTCGAGCAAATGCTCTCCACCCTCGGCCCCTCCTCCTGCTCCTCCTGGGCCGACGAAACCCCGCCGGCGCCGCCGTCCGCCGGTAACAGCGACAACAATGTCGTCTTCTCTTACGACGACTCTTCCAACCTCGCCACCAAGTTCCGCAGCCACCAGATCAGCGCCGGCGCCGCAGCGTCCAAGTCCTCCCCCACTGCCTCGGCCGCAGCCGCCGCCGCCATGATGCTCCAGCACCAGCTCATGATGTCCCGTGGCGGCTCCTCCTCCTCCGGCAACGGCGCTCCGATGGGGTTGTCGTTGGGGAGCAACGGTGACTTCAACGATATTGGTGACGGCTCGTCGTTTAAATCTCCTAATCCGGGCGTTGTTGACGGTGGTTCTTCTGTTCAGGCCTTGTTTAATGGCTTTACTGGATCTCTGTCTCCGAACCAGCCTCAGCATTTTCATCACCATCAGGGGGGTGCACTTCAAGCGCAGAACTATGGAGCTCAAGCCGCAGCCATGACCCAACCTCCGGCGAACGGCTCGGCCGGAGCTTCGGCTGCGCAACCCAGGCCCAGAGTCAGGGCCAGGCGAGGTCAAGCCACTGACCCACACTCCATCGCTGAAAGATTACGAAGAGAGAGAATTGCAGAGAGAATGAAAGCCCTGCAGGAGCTGGTTCCCAATGCCAACAAGACAGATAAGGCTTCAATGCTAGATGAGATCATCGATTATGTAAAGTTCCTGCAGCTCCAAGTCAAGGTTCTGAGCATGAGCAGGTTGGGTGGTGCTGGTGCTGTTGCTCCCCTTGTCACTGATATGTCCTCTGAGGGAGGCGGTGACTGTATCCAGACCAGTGCCAACGGCGGGACCCGCGCCGGCCGGAGCGGCAACCAAACGGCGTCGTCCAACGACAGCATGACGGTGACGGAGCACCAGGTGGCCAAGCTCATGGAGGAGGACATGGGCTCCGCCATGCAGTACCTACAGGGCAAAGGTCTCTGCCTCATGCCTATTTCCTTGGCCACAGCTATCTCCACCGCCACGTGTCACCCCCGGAACCCACTGATGAATGGCAACAACAACCCCGTCATTACATCTAACGGCGGAGAGGGGCCGTCGTCTCCCAGCATGTCAGTGTTGACCGTCCAGTCAGCCACGATGGCCAGTAACGGCGGCGTTGACGGTTCCGGTAAAGACGCCGCCTCCGTCTCCAAGCCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000976 GO:0000981 GO:0001046 GO:0001047 GO:0001067 GO:0001228 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0007275 GO:0007276 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009555 GO:0009653 GO:0009888 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016049 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019953 GO:0021700 GO:0022412 GO:0022414 GO:0022622 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0032504 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0040007 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0044703 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048229 GO:0048232 GO:0048235 GO:0048364 GO:0048468 GO:0048469 GO:0048518 GO:0048522 GO:0048588 GO:0048589 GO:0048609 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051704 GO:0055046 GO:0060255 GO:0060560 GO:0065007 GO:0071695 GO:0071704 GO:0080090 GO:0080147 GO:0090304 GO:0090558 GO:0090627 GO:0097159 GO:0097659 GO:0099402 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:1905392 GO:1990837 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HLH

Protein Analysis

420

Amino Acids

43.1

Weight (kDa)

6.05

Isoelectric Point (pI)

45.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HLH PF00010 218 - 263 7.2e-10 Helix-loop-helix DNA-binding domain
bHLH_SAC51 PF23173 222 - 266 2e-06 Transcription factor SAC51 bHLH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 155, 1189
Acc16I TGCGCA 1 cut(s) 603
Acc36I ACCTGC 1 cut(s) 807
AccB1I GGYRCC 2 cut(s) 124, 224
AccBSI CCGCTC 1 cut(s) 927
AccII CGCG 1 cut(s) 915
AclWI GGATC 1 cut(s) 478
AcoI YGGCCR 6 cut(s) 258, 585, 919, 981, 1062, 1203
AcvI CACGTG 1 cut(s) 1086
AcyI GRCGYC 5 cut(s) 26, 125, 225, 941, 1239
AdeI CACNNNGTG 1 cut(s) 979
AfaI GTAC 1 cut(s) 1022
AfiI CCNNNNNNNGG 8 cut(s) 137, 416, 514, 571, 578, 621, 799, 906
AflIII ACRYGT 1 cut(s) 1085
AgsI TTSAA 3 cut(s) 376, 527, 750
AhdI GACNNNNNGTC 1 cut(s) 394
AjnI CCWGG 4 cut(s) 101, 608, 626, 975
AjuI GAANNNNNNNTTGG 2 cut(s) 786, 818
AluBI AGCT 7 cut(s) 295, 545, 593, 715, 790, 988, 1070
AluI AGCT 7 cut(s) 295, 545, 593, 715, 790, 988, 1070
Alw21I GWGCWC 3 cut(s) 523, 547, 975
Alw26I GTCTC 4 cut(s) 483, 1043, 1167, 1255
Alw44I GTGCAC 1 cut(s) 519
AlwI GGATC 1 cut(s) 478
AlwNI CAGNNNCTG 1 cut(s) 715
Ama87I CYCGRG 1 cut(s) 59
ApaLI GTGCAC 1 cut(s) 519
ApeKI GCWGC 6 cut(s) 204, 230, 263, 554, 599, 787
AspLEI GCGC 7 cut(s) 127, 221, 227, 338, 532, 604, 917
AspS9I GGNCC 6 cut(s) 83, 105, 612, 624, 909, 1154
AsuC2I CCSGG 2 cut(s) 417, 1096
AsuHPI GGTGA 6 cut(s) 380, 398, 497, 890, 976, 1082
AvaI CYCGRG 1 cut(s) 59
AvaII GGWCC 1 cut(s) 909
BaeGI GKGCMC 1 cut(s) 523
BalI TGGCCA 3 cut(s) 983, 1064, 1205
BanI GGYRCC 2 cut(s) 124, 224
BanII GRGCYC 2 cut(s) 547, 1010
BbrPI CACGTG 1 cut(s) 1086
BbsI GAAGAC 1 cut(s) 154
Bbv12I GWGCWC 3 cut(s) 523, 547, 975
BbvCI CCTCAGC 1 cut(s) 492
BbvI GCAGC 6 cut(s) 216, 242, 275, 566, 586, 799
BccI CCATC 4 cut(s) 337, 516, 665, 1195
BciT130I CCWGG 4 cut(s) 103, 610, 628, 977
BciVI GTATCC 1 cut(s) 896
BcnI CCSGG 2 cut(s) 417, 1096
BcoDI GTCTC 4 cut(s) 483, 1043, 1167, 1255
BfaI CTAG 1 cut(s) 755
BfmI CTRYAG 3 cut(s) 707, 785, 1025
BfoI RGCGCY 4 cut(s) 128, 222, 228, 339
BfuAI ACCTGC 1 cut(s) 807
BfuI GTATCC 1 cut(s) 896
BglI GCCNNNNNGGC 2 cut(s) 927, 1202
Bme1390I CCNGG 6 cut(s) 103, 417, 610, 628, 977, 1096
Bme18I GGWCC 1 cut(s) 909
BmeRI GACNNNNNGTC 1 cut(s) 394
BmeT110I CYCGRG 1 cut(s) 59
BmgT120I GGNCC 6 cut(s) 83, 105, 612, 624, 909, 1154
BmrFI CCNGG 6 cut(s) 103, 417, 610, 628, 977, 1096
BmsI GCATC 1 cut(s) 270
BpiI GAAGAC 1 cut(s) 154
BpmI CTGGAG 1 cut(s) 269
Bpu10I CCTNAGC 1 cut(s) 492
BpuEI CTTGAG 1 cut(s) 531
BpuMI CCSGG 2 cut(s) 417, 1096
Bsa29I ATCGAT 1 cut(s) 768
BsaAI YACGTR 1 cut(s) 1086
BsaHI GRCGYC 5 cut(s) 26, 125, 225, 941, 1239
BsaI GGTCTC 1 cut(s) 1043
BsaJI CCNNGG 7 cut(s) 79, 102, 255, 307, 608, 1059, 1094
BsaWI WCCGGW 1 cut(s) 1229
Bsc4I CCNNNNNNNGG 8 cut(s) 137, 416, 514, 571, 578, 621, 799, 906
Bse118I RCCGGY 4 cut(s) 121, 137, 221, 917
Bse1I ACTGG 4 cut(s) 472, 894, 1189, 1206
BseBI CCWGG 4 cut(s) 103, 610, 628, 977
BseCI ATCGAT 1 cut(s) 768
BseDI CCNNGG 7 cut(s) 79, 102, 255, 307, 608, 1059, 1094
BseLI CCNNNNNNNGG 8 cut(s) 137, 416, 514, 571, 578, 621, 799, 906
BseMII CTCAG 3 cut(s) 506, 797, 858
BseNI ACTGG 4 cut(s) 472, 894, 1189, 1206
BseRI GAGGAG 7 cut(s) 28, 79, 88, 307, 310, 313, 1010
BseSI GKGCMC 1 cut(s) 523
BseX3I CGGCCG 3 cut(s) 258, 585, 919
BseXI GCAGC 6 cut(s) 216, 242, 275, 566, 586, 799
BseYI CCCAGC 1 cut(s) 1166
Bsh1236I CGCG 1 cut(s) 915
Bsh1285I CGRYCG 3 cut(s) 261, 588, 922
BshNI GGYRCC 2 cut(s) 124, 224
BshVI ATCGAT 1 cut(s) 768
BsiEI CGRYCG 3 cut(s) 261, 588, 922
BsiHKAI GWGCWC 3 cut(s) 523, 547, 975
BsiHKCI CYCGRG 1 cut(s) 59
BslFI GGGAC 2 cut(s) 289, 922
BslI CCNNNNNNNGG 8 cut(s) 137, 416, 514, 571, 578, 621, 799, 906
BsmAI GTCTC 4 cut(s) 483, 1043, 1167, 1255
BsmBI CGTCTC 2 cut(s) 1167, 1255
BsmFI GGGAC 2 cut(s) 289, 922
Bso31I GGTCTC 1 cut(s) 1043
BsoBI CYCGRG 1 cut(s) 59
Bsp1286I GDGCHC 4 cut(s) 523, 547, 975, 1010
Bsp143I GATC 3 cut(s) 213, 470, 762
BspCNI CTCAG 3 cut(s) 505, 798, 859
BspDI ATCGAT 1 cut(s) 768
BspFNI CGCG 1 cut(s) 915
BspHI TCATGA 1 cut(s) 297
BspMAI CTGCAG 2 cut(s) 711, 789
BspMI ACCTGC 1 cut(s) 807
BspPI GGATC 1 cut(s) 478
BspT107I GGYRCC 2 cut(s) 124, 224
BspTNI GGTCTC 1 cut(s) 1043
BsrBI CCGCTC 1 cut(s) 927
BsrFI RCCGGY 4 cut(s) 121, 137, 221, 917
BsrI ACTGG 4 cut(s) 472, 894, 1189, 1206
BssAI RCCGGY 4 cut(s) 121, 137, 221, 917
BssECI CCNNGG 7 cut(s) 79, 102, 255, 307, 608, 1059, 1094
BssMI GATC 3 cut(s) 213, 470, 762
BssNI GRCGYC 5 cut(s) 26, 125, 225, 941, 1239
BssT1I CCWWGG 1 cut(s) 1059
Bst2UI CCWGG 4 cut(s) 103, 610, 628, 977
Bst4CI ACNGT 6 cut(s) 368, 431, 884, 964, 1186, 1226
Bst6I CTCTTC 2 cut(s) 184, 670
BstACI GRCGYC 5 cut(s) 26, 125, 225, 941, 1239
BstBAI YACGTR 1 cut(s) 1086
BstC8I GCNNGC 3 cut(s) 123, 223, 919
BstDEI CTNAG 3 cut(s) 492, 806, 867
BstDSI CCRYGG 1 cut(s) 307
BstFNI CGCG 1 cut(s) 915
BstH2I RGCGCY 4 cut(s) 128, 222, 228, 339
BstHHI GCGC 7 cut(s) 127, 221, 227, 338, 532, 604, 917
BstKTI GATC 3 cut(s) 216, 473, 765
BstMAI GTCTC 4 cut(s) 483, 1043, 1167, 1255
BstMBI GATC 3 cut(s) 213, 470, 762
BstMCI CGRYCG 3 cut(s) 261, 588, 922
BstNI CCWGG 4 cut(s) 103, 610, 628, 977
BstNSI RCATGY 1 cut(s) 1174
BstSCI CCNGG 6 cut(s) 101, 415, 608, 626, 975, 1094
BstSFI CTRYAG 3 cut(s) 707, 785, 1025
BstSLI GKGCMC 1 cut(s) 523
BstUI CGCG 1 cut(s) 915
BstV1I GCAGC 6 cut(s) 216, 242, 275, 566, 586, 799
BstV2I GAAGAC 1 cut(s) 154
BstX2I RGATCY 1 cut(s) 470
BstXI CCANNNNNNTGG 1 cut(s) 991
BstYI RGATCY 1 cut(s) 470
BstZI CGGCCG 3 cut(s) 258, 585, 919
Bsu15I ATCGAT 1 cut(s) 768
BsuI GTATCC 1 cut(s) 896
BsuTUI ATCGAT 1 cut(s) 768
BtgI CCRYGG 1 cut(s) 307
BtgZI GCGATG 1 cut(s) 643
BtsI GCAGTG 1 cut(s) 249
BtsIMutI CAGTG 6 cut(s) 249, 642, 852, 901, 1103, 1182
BveI ACCTGC 1 cut(s) 807
Cac8I GCNNGC 3 cut(s) 123, 223, 919
CaiI CAGNNNCTG 1 cut(s) 715
CciI TCATGA 1 cut(s) 297
CfoI GCGC 7 cut(s) 127, 221, 227, 338, 532, 604, 917
Cfr10I RCCGGY 4 cut(s) 121, 137, 221, 917
Cfr13I GGNCC 6 cut(s) 83, 105, 612, 624, 909, 1154
ClaI ATCGAT 1 cut(s) 768
CseI GACGC 4 cut(s) 34, 222, 930, 1247
CsiI ACCWGGT 1 cut(s) 975
Csp6I GTAC 1 cut(s) 1021
CviQI GTAC 1 cut(s) 1021
DdeI CTNAG 3 cut(s) 492, 806, 867
DinI GGCGCC 2 cut(s) 126, 226
DpnI GATC 3 cut(s) 215, 472, 764
DpnII GATC 3 cut(s) 213, 470, 762
DraI TTTAAA 1 cut(s) 403
DraIII CACNNNGTG 1 cut(s) 979
DrdI GACNNNNNNGTC 2 cut(s) 155, 1189
DriI GACNNNNNGTC 1 cut(s) 394
DseDI GACNNNNNNGTC 2 cut(s) 155, 1189
EaeI YGGCCR 6 cut(s) 258, 585, 919, 981, 1062, 1203
EagI CGGCCG 3 cut(s) 258, 585, 919
Eam1104I CTCTTC 2 cut(s) 184, 670
Eam1105I GACNNNNNGTC 1 cut(s) 394
EarI CTCTTC 2 cut(s) 184, 670
EciI GGCGGA 4 cut(s) 31, 124, 1000, 1161
Ecl136II GAGCTC 1 cut(s) 545
EclXI CGGCCG 3 cut(s) 258, 585, 919
Eco130I CCWWGG 1 cut(s) 1059
Eco147I AGGCCT 1 cut(s) 449
Eco24I GRGCYC 2 cut(s) 547, 1010
Eco31I GGTCTC 1 cut(s) 1043
Eco47I GGWCC 1 cut(s) 909
Eco52I CGGCCG 3 cut(s) 258, 585, 919
Eco53kI GAGCTC 1 cut(s) 545
Eco72I CACGTG 1 cut(s) 1086
Eco88I CYCGRG 1 cut(s) 59
EcoICRI GAGCTC 1 cut(s) 545
EcoO109I RGGNCCY 1 cut(s) 909
EcoRII CCWGG 4 cut(s) 101, 608, 626, 975
EcoT14I CCWWGG 1 cut(s) 1059
EcoT38I GRGCYC 2 cut(s) 547, 1010
EgeI GGCGCC 2 cut(s) 126, 226
EheI GGCGCC 2 cut(s) 126, 226
ErhI CCWWGG 1 cut(s) 1059
Esp3I CGTCTC 2 cut(s) 1167, 1255
FaqI GGGAC 2 cut(s) 289, 922
FauI CCCGC 3 cut(s) 126, 899, 920
FriOI GRGCYC 2 cut(s) 547, 1010
FspBI CTAG 1 cut(s) 755
FspI TGCGCA 1 cut(s) 603
GlaI GCGC 7 cut(s) 126, 220, 226, 337, 531, 603, 916
GsaI CCCAGC 1 cut(s) 1170
GsuI CTGGAG 1 cut(s) 269
HaeII RGCGCY 4 cut(s) 128, 222, 228, 339
HgaI GACGC 4 cut(s) 34, 222, 930, 1247
HhaI GCGC 7 cut(s) 127, 221, 227, 338, 532, 604, 917
Hin1I GRCGYC 5 cut(s) 26, 125, 225, 941, 1239
Hin6I GCGC 7 cut(s) 125, 219, 225, 336, 530, 602, 915
HinP1I GCGC 7 cut(s) 125, 219, 225, 336, 530, 602, 915
HincII GTYRAC 3 cut(s) 427, 1182, 1222
HindII GTYRAC 3 cut(s) 427, 1182, 1222
HinfI GANTC 3 cut(s) 35, 176, 618
HphI GGTGA 6 cut(s) 380, 398, 497, 890, 976, 1082
Hpy166II GTNNAC 4 cut(s) 427, 521, 1182, 1222
Hpy188I TCNGA 4 cut(s) 342, 483, 807, 868
Hpy188III TCNNGA 2 cut(s) 298, 889
Hpy8I GTNNAC 4 cut(s) 427, 521, 1182, 1222
Hpy99I CGWCG 6 cut(s) 53, 113, 176, 400, 946, 1162
HpyCH4III ACNGT 6 cut(s) 368, 431, 884, 964, 1186, 1226
HpyCH4IV ACGT 1 cut(s) 1085
HpyCH4V TGCA 5 cut(s) 521, 689, 709, 787, 1018
HpyF3I CTNAG 3 cut(s) 492, 806, 867
HpySE526I ACGT 1 cut(s) 1085
Hsp92I GRCGYC 5 cut(s) 26, 125, 225, 941, 1239
HspAI GCGC 7 cut(s) 125, 219, 225, 336, 530, 602, 915
KasI GGCGCC 2 cut(s) 124, 224
KflI GGGWCCC 1 cut(s) 909
KroI GCCGGC 3 cut(s) 121, 221, 917
KroNI GCCGGC 3 cut(s) 123, 223, 919
Kzo9I GATC 3 cut(s) 213, 470, 762
Lsp1109I GCAGC 6 cut(s) 216, 242, 275, 566, 586, 799
LweI GCATC 1 cut(s) 270
MabI ACCWGGT 1 cut(s) 975
MaeI CTAG 1 cut(s) 755
MaeII ACGT 1 cut(s) 1085
MaeIII GTNAC 8 cut(s) 140, 368, 386, 850, 878, 964, 1088, 1208
MalI GATC 3 cut(s) 215, 472, 764
MbiI CCGCTC 1 cut(s) 927
MboI GATC 3 cut(s) 213, 470, 762
MboII GAAGA 4 cut(s) 154, 171, 429, 687
MflI RGATCY 1 cut(s) 470
MhlI GDGCHC 4 cut(s) 523, 547, 975, 1010
MlsI TGGCCA 3 cut(s) 983, 1064, 1205
MluCI AATT 1 cut(s) 684
MluNI TGGCCA 3 cut(s) 983, 1064, 1205
Mly113I GGCGCC 2 cut(s) 125, 225
MlyI GAGTC 3 cut(s) 29, 170, 627
MmeI TCCRAC 2 cut(s) 207, 972
Mox20I TGGCCA 3 cut(s) 983, 1064, 1205
MreI CGCCGGCG 2 cut(s) 121, 221
MroNI GCCGGC 3 cut(s) 121, 221, 917
MscI TGGCCA 3 cut(s) 983, 1064, 1205
MseI TTAA 2 cut(s) 402, 456
MslI CAYNNNNRTG 3 cut(s) 857, 962, 1175
Msp20I TGGCCA 3 cut(s) 983, 1064, 1205
MspR9I CCNGG 6 cut(s) 103, 417, 610, 628, 977, 1096
MvaI CCWGG 4 cut(s) 103, 610, 628, 977
MvnI CGCG 1 cut(s) 915
NaeI GCCGGC 3 cut(s) 123, 223, 919
NarI GGCGCC 2 cut(s) 125, 225
NciI CCSGG 2 cut(s) 417, 1096
NdeII GATC 3 cut(s) 213, 470, 762
NgoMIV GCCGGC 3 cut(s) 121, 221, 917
NmeAIII GCCGAG 3 cut(s) 60, 236, 563
NmuCI GTSAC 6 cut(s) 368, 386, 850, 878, 964, 1088
NsbI TGCGCA 1 cut(s) 603
NspI RCATGY 1 cut(s) 1174
PaeR7I CTCGAG 1 cut(s) 59
PagI TCATGA 1 cut(s) 297
PceI AGGCCT 1 cut(s) 449
PcsI WCGNNNNNNNCGW 2 cut(s) 57, 1245
PdiI GCCGGC 3 cut(s) 123, 223, 919
PleI GAGTC 3 cut(s) 29, 170, 626
PluTI GGCGCC 2 cut(s) 128, 228
PmaCI CACGTG 1 cut(s) 1086
PmlI CACGTG 1 cut(s) 1086
PpsI GAGTC 3 cut(s) 29, 170, 626
Ppu21I YACGTR 1 cut(s) 1086
PpuMI RGGWCCY 1 cut(s) 909
Psp124BI GAGCTC 1 cut(s) 547
Psp5II RGGWCCY 1 cut(s) 909
Psp6I CCWGG 4 cut(s) 101, 608, 626, 975
PspCI CACGTG 1 cut(s) 1086
PspFI CCCAGC 1 cut(s) 1166
PspGI CCWGG 4 cut(s) 101, 608, 626, 975
PspPI GGNCC 6 cut(s) 83, 105, 612, 624, 909, 1154
PspPPI RGGWCCY 1 cut(s) 909
PspXI VCTCGAGB 1 cut(s) 59
PstI CTGCAG 2 cut(s) 711, 789
PstNI CAGNNNCTG 1 cut(s) 715
PsuI RGATCY 1 cut(s) 470
RsaI GTAC 1 cut(s) 1022
RsaNI GTAC 1 cut(s) 1021
RseI CAYNNNNRTG 3 cut(s) 857, 962, 1175
SacI GAGCTC 1 cut(s) 547
SaqAI TTAA 2 cut(s) 402, 456
Sau3AI GATC 3 cut(s) 213, 470, 762
Sau96I GGNCC 6 cut(s) 83, 105, 612, 624, 909, 1154
SbfI CCTGCAGG 1 cut(s) 711
SchI GAGTC 3 cut(s) 29, 170, 627
ScrFI CCNGG 6 cut(s) 103, 417, 610, 628, 977, 1096
SdaI CCTGCAGG 1 cut(s) 711
SduI GDGCHC 4 cut(s) 523, 547, 975, 1010
SexAI ACCWGGT 1 cut(s) 975
SfaNI GCATC 1 cut(s) 270
SfcI CTRYAG 3 cut(s) 707, 785, 1025
SfoI GGCGCC 2 cut(s) 126, 226
Sfr274I CTCGAG 1 cut(s) 59
SgrAI CRCCGGYG 2 cut(s) 121, 221
SinI GGWCC 1 cut(s) 909
SlaI CTCGAG 1 cut(s) 59
SmiMI CAYNNNNRTG 3 cut(s) 857, 962, 1175
SmlI CTYRAG 2 cut(s) 59, 546
SmoI CTYRAG 2 cut(s) 59, 546
Sse8387I CCTGCAGG 1 cut(s) 711
Sse9I AATT 1 cut(s) 684
SseBI AGGCCT 1 cut(s) 449
SspDI GGCGCC 2 cut(s) 124, 224
SspMI CTAG 1 cut(s) 755
SstI GAGCTC 1 cut(s) 547
StuI AGGCCT 1 cut(s) 449
StyD4I CCNGG 6 cut(s) 101, 415, 608, 626, 975, 1094
StyI CCWWGG 1 cut(s) 1059
TaaI ACNGT 6 cut(s) 368, 431, 884, 964, 1186, 1226
TaiI ACGT 1 cut(s) 1088
TaqI TCGA 3 cut(s) 33, 60, 768
TasI AATT 1 cut(s) 684
Tru1I TTAA 2 cut(s) 402, 456
Tru9I TTAA 2 cut(s) 402, 456
TscAI CASTG 6 cut(s) 256, 649, 859, 901, 1110, 1182
TseFI GTSAC 6 cut(s) 368, 386, 850, 878, 964, 1088
TseI GCWGC 6 cut(s) 204, 230, 263, 554, 599, 787
Tsp45I GTSAC 6 cut(s) 368, 386, 850, 878, 964, 1088
TspDTI ATGAA 4 cut(s) 17, 491, 713, 1124
TspGWI ACGGA 2 cut(s) 983, 1237
TspRI CASTG 6 cut(s) 256, 649, 859, 901, 1110, 1182
VneI GTGCAC 1 cut(s) 519
VpaK11BI GGWCC 1 cut(s) 909
XceI RCATGY 1 cut(s) 1174
XhoI CTCGAG 1 cut(s) 59
XspI CTAG 1 cut(s) 755
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.