Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0009533

Physical Location & Seq

Genomic Coordinates Forward (+)

21683337 .. 21687481

Gene Structure 4145 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G260800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1476 bp

ATGCAGCCTTGTAGCAAAGAAATGCAAGATATGAACTCCCTCTTAAACTCTTCACCTTCCTCCCAACTCTCTCTCCAAGACCACCACCGCCACCTTCAACTTCAACCTCAACAACAATCTCACTCTCACTCCCATTCTCATTCAAGGCCACACCTCCATAACTCTCACTCTCAGATGCATCCTCAAATTCCTTCCCCCTCCCCCGCTCACTTCGACTCCGCTTCCCACGACGACTTCCTCGAGCAAATGCTCTCCACCCTCGGCCCCTCGTCCTGCTCCTGGGCCGACGACACGCCGCCCTCCAACTCCGACAATGTCGTCTTCACTTACGACGACTCCGCCAACCTCGCCACCAAGTTCCGCAGCCAGCAGATCAGCGCCGGAGCCGGTGCCTCCAAATCCGCTTCCACCTCCGCCGCTGCTGCCGCCGCCATGATGCTCCAGCACCAGCTCATGATGTCCAGATCAACGTCCGCCGACTCTGGCTTCGTTCCCATGGCCTTGTCTTTGGGCAACGGAGACTTTGACCGCTCCAACAACGACGTCGTCGAGGGTTCCTCCTCCTTTAAATCTCCCAATCCTGTGGGAGGTGAGGGGGCTTCTTCTGTTCAAGCCCTGTTCAATGGGTTCTCTGGATCACTGCATGGGGGGGCTACTACTCAGTCTCCCAATCAGCATTTTCACCAACCTCAGGGAGGCTCGCTGCAGGCACAGAACTATGGAGGTCCAGGGGCGGCGATGAACCAAGGTCCGGCGAGTGGCTCGGGTGGGGGCGGGGGTGCACCCGCACAAGCCAGACCCAGAGTCAGGGCGAGGAGAGGCCAAGCCACTGACCCACACAGCATCGCTGAAAGATTACGGAGAGAGAGAATCGCAGAGAGAATGAAGGCTCTGCAGGAGCTGGTTCCCAATGCGAACAAGACAGACAAAGCTTCAATGTTGGATGAAATCATCGATTATGTCAAATTCCTCCAGCTCCAAGTCAAGGTTCTGAGCATGAGCAGGTTGGGCGGTGCAGCTGCTGTTGCTCCTCTTGTTGCTGATGTGTCCTCTGAGGGAGGCGGTGACTGTATCCAGGCCAGTGCCAATGGCGGGACCCGCGGCCGGAGTTCTAACGGCAACCAAACGGCCTCCTCATCTAACGACAACAGCATGACGGTCACGGAGCACCAAGTTGCCAAGCTGATGGAGGAAGACATGGGATCCGCCATGCAGTACCTCCAGGGCAAGGGTTTATGCCTCATGCCAATTTCCTTGGCAACCGCCATCTCCACTGCCACGTGTCACACCAGGAACCCCCTCATCCACAACAACAACAACAACAACAACAATAATAATAATGCGGTCATGGCATCCAACGGTGGCGAAGGGCCCTCCTCTCCCAGCATGTCCGTGTTGACCGTCCAGTCAGCCACGATGGGTAACGGTGGGGTCGACGGTTCCGTTAAAGACGCGACCTCCGTCTCCAAGCCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000976 GO:0000981 GO:0001046 GO:0001047 GO:0001067 GO:0001228 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0007275 GO:0007276 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009555 GO:0009653 GO:0009888 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016049 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019953 GO:0021700 GO:0022412 GO:0022414 GO:0022622 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0032504 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0040007 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0044703 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048229 GO:0048232 GO:0048235 GO:0048364 GO:0048468 GO:0048469 GO:0048518 GO:0048522 GO:0048588 GO:0048589 GO:0048609 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051704 GO:0055046 GO:0060255 GO:0060560 GO:0065007 GO:0071695 GO:0071704 GO:0080090 GO:0080147 GO:0090304 GO:0090558 GO:0090627 GO:0097159 GO:0097659 GO:0099402 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:1905392 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HLH

Protein Analysis

492

Amino Acids

51.23

Weight (kDa)

6.38

Isoelectric Point (pI)

54.54

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009533)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G24260 AT2G24260
fragaria_vesca	FvH4_1g01110 FvH4_1g01110
malus_domestica	MD02G1009200.v1.1 MD15G1154600.v1.1
prunus_persica	Prupe.2G080600_v2.0.a1 Prupe.5G043700_v2.0.a1 Prupe.7G260800_v2.0.a1 Prupe.7G260800_v2.0.a1
pyrus_communis	pycom02g00820 pycom15g13820
rosa_chinensis	RchiOBHm_Chr2g0085911
rosa_laevigata	RLG00000015726
rosa_multiflora	Rmu_sc0001748.1_g000004
rosa_roxburghii	Rroxscaffold_2G00154940
rosa_rugosa	Rorug01G0464300
rosa_samantha	Rh2AG013200 Rh2BG013900 Rh2CG014400 Rh2DG015700
rosa_wichuraiana	Rw2G001180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	317, 1405
AatII	GACGTC	1 cut(s)	546
Acc36I	ACCTGC	1 cut(s)	993
AccB1I	GGYRCC	1 cut(s)	389
AccBSI	CCGCTC	2 cut(s)	206, 531
AccI	GTMKAC	1 cut(s)	1434
AccII	CGCG	2 cut(s)	1101, 1454
AclWI	GGATC	3 cut(s)	643, 1197, 1210
AcoI	YGGCCR	1 cut(s)	1102
AcsI	RAATTY	2 cut(s)	186, 965
AcvI	CACGTG	1 cut(s)	1281
AcyI	GRCGYC	1 cut(s)	543
AfaI	GTAC	1 cut(s)	1217
AflIII	ACRYGT	1 cut(s)	1280
AgsI	TTSAA	6 cut(s)	98, 104, 144, 611, 622, 936
AhdI	GACNNNNNGTC	1 cut(s)	803
AjnI	CCWGG	5 cut(s)	278, 727, 1074, 1221, 1289
AjuI	GAANNNNNNNTTGG	2 cut(s)	972, 1004
AluBI	AGCT	6 cut(s)	451, 901, 932, 976, 1019, 1183
AluI	AGCT	6 cut(s)	451, 901, 932, 976, 1019, 1183
Alw21I	GWGCWC	2 cut(s)	784, 1170
Alw26I	GTCTC	3 cut(s)	513, 669, 1468
Alw44I	GTGCAC	1 cut(s)	780
AlwI	GGATC	3 cut(s)	643, 1197, 1210
AlwNI	CAGNNNCTG	2 cut(s)	901, 1022
Ama87I	CYCGRG	2 cut(s)	239, 763
AoxI	GGCC	9 cut(s)	146, 262, 282, 498, 820, 1077, 1102, 1128, 1370
ApaI	GGGCCC	1 cut(s)	1374
ApaLI	GTGCAC	1 cut(s)	780
ApeKI	GCWGC	7 cut(s)	4, 363, 419, 422, 703, 1016, 1019
ApoI	RAATTY	2 cut(s)	186, 965
ArsI	GACNNNNNNTTYG	2 cut(s)	470, 502
AspLEI	GCGC	1 cut(s)	380
AspS9I	GGNCC	7 cut(s)	263, 282, 725, 749, 1095, 1370, 1371
AsuHPI	GGTGA	4 cut(s)	45, 602, 674, 1076
AvaI	CYCGRG	2 cut(s)	239, 763
AvaII	GGWCC	3 cut(s)	725, 749, 1095
AxyI	CCTNAGG	1 cut(s)	690
BaeGI	GKGCMC	2 cut(s)	784, 1374
BamHI	GGATCC	1 cut(s)	1202
BanI	GGYRCC	1 cut(s)	389
BanII	GRGCYC	1 cut(s)	1374
BbrPI	CACGTG	1 cut(s)	1281
BbsI	GAAGAC	2 cut(s)	313, 1200
Bbv12I	GWGCWC	2 cut(s)	784, 1170
BbvI	GCAGC	7 cut(s)	16, 375, 406, 409, 690, 1006, 1028
BccI	CCATC	3 cut(s)	1180, 1274, 1411
BceAI	ACGGC	2 cut(s)	1132, 1143
BciT130I	CCWGG	5 cut(s)	280, 729, 1076, 1223, 1291
BciVI	GTATCC	1 cut(s)	1082
BcoDI	GTCTC	3 cut(s)	513, 669, 1468
BfmI	CTRYAG	2 cut(s)	704, 893
BfoI	RGCGCY	1 cut(s)	381
BfuAI	ACCTGC	1 cut(s)	993
BfuI	GTATCC	1 cut(s)	1082
Bme1390I	CCNGG	5 cut(s)	280, 729, 1076, 1223, 1291
Bme18I	GGWCC	3 cut(s)	725, 749, 1095
BmeRI	GACNNNNNGTC	1 cut(s)	803
BmeT110I	CYCGRG	2 cut(s)	239, 763
BmgT120I	GGNCC	7 cut(s)	263, 282, 725, 749, 1095, 1370, 1371
BmrFI	CCNGG	5 cut(s)	280, 729, 1076, 1223, 1291
BmsI	GCATC	5 cut(s)	165, 187, 426, 852, 1361
BoxI	GACNNNNGTC	1 cut(s)	1460
BpiI	GAAGAC	2 cut(s)	313, 1200
BplI	GAGNNNNNCTC	2 cut(s)	542, 574
BpmI	CTGGAG	3 cut(s)	425, 956, 1205
Bsa29I	ATCGAT	1 cut(s)	954
BsaAI	YACGTR	1 cut(s)	1281
BsaHI	GRCGYC	1 cut(s)	543
BsaJI	CCNNGG	8 cut(s)	259, 279, 495, 728, 745, 1099, 1222, 1254
Bse118I	RCCGGY	1 cut(s)	386
Bse1I	ACTGG	2 cut(s)	1080, 1405
Bse21I	CCTNAGG	1 cut(s)	690
BseBI	CCWGG	5 cut(s)	280, 729, 1076, 1223, 1291
BseCI	ATCGAT	1 cut(s)	954
BseDI	CCNNGG	8 cut(s)	259, 279, 495, 728, 745, 1099, 1222, 1254
BseGI	GGATG	4 cut(s)	178, 949, 1302, 1352
BseMII	CTCAG	5 cut(s)	185, 674, 704, 983, 1044
BseNI	ACTGG	2 cut(s)	1080, 1405
BseRI	GAGGAG	5 cut(s)	550, 829, 1020, 1123, 1366
BseSI	GKGCMC	2 cut(s)	784, 1374
BseX3I	CGGCCG	1 cut(s)	1102
BseXI	GCAGC	7 cut(s)	16, 375, 406, 409, 690, 1006, 1028
BseYI	CCCAGC	1 cut(s)	1382
BsgI	GTGCAG	1 cut(s)	1035
Bsh1236I	CGCG	2 cut(s)	1101, 1454
Bsh1285I	CGRYCG	1 cut(s)	1105
BshFI	GGCC	9 cut(s)	148, 264, 284, 500, 822, 1079, 1104, 1130, 1372
BshNI	GGYRCC	1 cut(s)	389
BshVI	ATCGAT	1 cut(s)	954
BsiEI	CGRYCG	1 cut(s)	1105
BsiHKAI	GWGCWC	2 cut(s)	784, 1170
BsiHKCI	CYCGRG	2 cut(s)	239, 763
BsiSI	CCGG	4 cut(s)	381, 387, 752, 1105
BslFI	GGGAC	1 cut(s)	1108
BsmAI	GTCTC	3 cut(s)	513, 669, 1468
BsmBI	CGTCTC	1 cut(s)	1468
BsmFI	GGGAC	1 cut(s)	1108
BsnI	GGCC	9 cut(s)	148, 264, 284, 500, 822, 1079, 1104, 1130, 1372
BsoBI	CYCGRG	2 cut(s)	239, 763
Bsp120I	GGGCCC	1 cut(s)	1370
Bsp1286I	GDGCHC	3 cut(s)	784, 1170, 1374
Bsp143I	GATC	4 cut(s)	372, 464, 635, 1202
Bsp19I	CCATGG	1 cut(s)	495
BspANI	GGCC	9 cut(s)	148, 264, 284, 500, 822, 1079, 1104, 1130, 1372
BspCNI	CTCAG	5 cut(s)	184, 673, 703, 984, 1045
BspDI	ATCGAT	1 cut(s)	954
BspFNI	CGCG	2 cut(s)	1101, 1454
BspHI	TCATGA	1 cut(s)	453
BspMAI	CTGCAG	2 cut(s)	708, 897
BspMI	ACCTGC	1 cut(s)	993
BspPI	GGATC	3 cut(s)	643, 1197, 1210
BspT107I	GGYRCC	1 cut(s)	389
BsrBI	CCGCTC	2 cut(s)	206, 531
BsrFI	RCCGGY	1 cut(s)	386
BsrI	ACTGG	2 cut(s)	1080, 1405
BssAI	RCCGGY	1 cut(s)	386
BssECI	CCNNGG	8 cut(s)	259, 279, 495, 728, 745, 1099, 1222, 1254
BssMI	GATC	4 cut(s)	372, 464, 635, 1202
BssNI	GRCGYC	1 cut(s)	543
BssT1I	CCWWGG	3 cut(s)	495, 745, 1254
Bst2UI	CCWGG	5 cut(s)	280, 729, 1076, 1223, 1291
Bst4CI	ACNGT	6 cut(s)	1070, 1159, 1361, 1402, 1427, 1439
Bst6I	CTCTTC	1 cut(s)	55
BstACI	GRCGYC	1 cut(s)	543
BstBAI	YACGTR	1 cut(s)	1281
BstC8I	GCNNGC	3 cut(s)	368, 701, 708
BstDEI	CTNAG	5 cut(s)	171, 660, 690, 992, 1053
BstDSI	CCRYGG	2 cut(s)	495, 1099
BstENI	CCTNNNNNAGG	2 cut(s)	585, 693
BstF5I	GGATG	4 cut(s)	178, 949, 1302, 1352
BstFNI	CGCG	2 cut(s)	1101, 1454
BstH2I	RGCGCY	1 cut(s)	381
BstHHI	GCGC	1 cut(s)	380
BstKTI	GATC	4 cut(s)	375, 467, 638, 1205
BstMAI	GTCTC	3 cut(s)	513, 669, 1468
BstMBI	GATC	4 cut(s)	372, 464, 635, 1202
BstMCI	CGRYCG	1 cut(s)	1105
BstMWI	GCNNNNNNNGC	8 cut(s)	347, 422, 425, 428, 1008, 1025, 1098, 1349
BstNI	CCWGG	5 cut(s)	280, 729, 1076, 1223, 1291
BstNSI	RCATGY	1 cut(s)	1390
BstPAI	GACNNNNGTC	1 cut(s)	1460
BstSCI	CCNGG	5 cut(s)	278, 727, 1074, 1221, 1289
BstSFI	CTRYAG	2 cut(s)	704, 893
BstSLI	GKGCMC	2 cut(s)	784, 1374
BstUI	CGCG	2 cut(s)	1101, 1454
BstV1I	GCAGC	7 cut(s)	16, 375, 406, 409, 690, 1006, 1028
BstV2I	GAAGAC	2 cut(s)	313, 1200
BstX2I	RGATCY	1 cut(s)	1202
BstXI	CCANNNNNNTGG	2 cut(s)	583, 1186
BstYI	RGATCY	1 cut(s)	1202
BstZI	CGGCCG	1 cut(s)	1102
Bsu15I	ATCGAT	1 cut(s)	954
Bsu36I	CCTNAGG	1 cut(s)	690
BsuI	GTATCC	1 cut(s)	1082
BsuRI	GGCC	9 cut(s)	148, 264, 284, 500, 822, 1079, 1104, 1130, 1372
BsuTUI	ATCGAT	1 cut(s)	954
BtgI	CCRYGG	2 cut(s)	495, 1099
BtgZI	GCGATG	2 cut(s)	752, 829
BtsCI	GGATG	4 cut(s)	178, 949, 1302, 1352
BtsI	GCAGTG	2 cut(s)	638, 1272
BtsIMutI	CAGTG	4 cut(s)	638, 828, 1087, 1272
BveI	ACCTGC	1 cut(s)	993
Cac8I	GCNNGC	3 cut(s)	368, 701, 708
CaiI	CAGNNNCTG	2 cut(s)	901, 1022
CciI	TCATGA	1 cut(s)	453
CfoI	GCGC	1 cut(s)	380
Cfr10I	RCCGGY	1 cut(s)	386
Cfr13I	GGNCC	7 cut(s)	263, 282, 725, 749, 1095, 1370, 1371
Cfr42I	CCGCGG	1 cut(s)	1102
ClaI	ATCGAT	1 cut(s)	954
CseI	GACGC	1 cut(s)	1460
Csp6I	GTAC	1 cut(s)	1216
CviQI	GTAC	1 cut(s)	1216
DdeI	CTNAG	5 cut(s)	171, 660, 690, 992, 1053
DpnI	GATC	4 cut(s)	374, 466, 637, 1204
DpnII	GATC	4 cut(s)	372, 464, 635, 1202
DraI	TTTAAA	1 cut(s)	568
DrdI	GACNNNNNNGTC	2 cut(s)	317, 1405
DriI	GACNNNNNGTC	1 cut(s)	803
DseDI	GACNNNNNNGTC	2 cut(s)	317, 1405
EaeI	YGGCCR	1 cut(s)	1102
EagI	CGGCCG	1 cut(s)	1102
Eam1104I	CTCTTC	1 cut(s)	55
Eam1105I	GACNNNNNGTC	1 cut(s)	803
EarI	CTCTTC	1 cut(s)	55
EciI	GGCGGA	4 cut(s)	328, 403, 463, 1195
EclXI	CGGCCG	1 cut(s)	1102
Eco130I	CCWWGG	3 cut(s)	495, 745, 1254
Eco24I	GRGCYC	1 cut(s)	1374
Eco47I	GGWCC	3 cut(s)	725, 749, 1095
Eco52I	CGGCCG	1 cut(s)	1102
Eco72I	CACGTG	1 cut(s)	1281
Eco81I	CCTNAGG	1 cut(s)	690
Eco88I	CYCGRG	2 cut(s)	239, 763
EcoNI	CCTNNNNNAGG	2 cut(s)	585, 693
EcoO109I	RGGNCCY	3 cut(s)	1095, 1370, 1371
EcoRII	CCWGG	5 cut(s)	278, 727, 1074, 1221, 1289
EcoT14I	CCWWGG	3 cut(s)	495, 745, 1254
EcoT22I	ATGCAT	1 cut(s)	180
EcoT38I	GRGCYC	1 cut(s)	1374
ErhI	CCWWGG	3 cut(s)	495, 745, 1254
Esp3I	CGTCTC	1 cut(s)	1468
FaqI	GGGAC	1 cut(s)	1108
FauI	CCCGC	5 cut(s)	211, 767, 793, 1085, 1106
FblI	GTMKAC	1 cut(s)	1434
FokI	GGATG	4 cut(s)	165, 956, 1289, 1339
FriOI	GRGCYC	1 cut(s)	1374
GlaI	GCGC	1 cut(s)	379
GsaI	CCCAGC	1 cut(s)	1386
GsuI	CTGGAG	3 cut(s)	425, 956, 1205
HaeII	RGCGCY	1 cut(s)	381
HaeIII	GGCC	9 cut(s)	148, 264, 284, 500, 822, 1079, 1104, 1130, 1372
HapII	CCGG	4 cut(s)	381, 387, 752, 1105
HgaI	GACGC	1 cut(s)	1460
HhaI	GCGC	1 cut(s)	380
Hin1I	GRCGYC	1 cut(s)	543
Hin6I	GCGC	1 cut(s)	378
HinP1I	GCGC	1 cut(s)	378
HincII	GTYRAC	2 cut(s)	1398, 1435
HindII	GTYRAC	2 cut(s)	1398, 1435
HindIII	AAGCTT	1 cut(s)	930
HinfI	GANTC	5 cut(s)	215, 335, 479, 804, 870
HpaII	CCGG	4 cut(s)	381, 387, 752, 1105
HphI	GGTGA	4 cut(s)	45, 602, 674, 1076
Hpy166II	GTNNAC	3 cut(s)	782, 1398, 1435
Hpy188I	TCNGA	4 cut(s)	174, 310, 993, 1054
Hpy188III	TCNNGA	3 cut(s)	454, 462, 633
Hpy8I	GTNNAC	3 cut(s)	782, 1398, 1435
Hpy99I	CGWCG	7 cut(s)	233, 290, 335, 545, 548, 551, 1439
HpyAV	CCTTC	5 cut(s)	66, 104, 201, 880, 1361
HpyCH4III	ACNGT	6 cut(s)	1070, 1159, 1361, 1402, 1427, 1439
HpyCH4IV	ACGT	3 cut(s)	470, 543, 1280
HpyCH4V	TGCA	9 cut(s)	4, 25, 178, 643, 706, 782, 895, 1016, 1213
HpyF10VI	GCNNNNNNNGC	8 cut(s)	347, 422, 425, 428, 1008, 1025, 1098, 1349
HpyF3I	CTNAG	5 cut(s)	171, 660, 690, 992, 1053
HpySE526I	ACGT	3 cut(s)	470, 543, 1280
Hsp92I	GRCGYC	1 cut(s)	543
HspAI	GCGC	1 cut(s)	378
KflI	GGGWCCC	1 cut(s)	1095
KspI	CCGCGG	1 cut(s)	1102
Kzo9I	GATC	4 cut(s)	372, 464, 635, 1202
LmnI	GCTCC	8 cut(s)	281, 383, 444, 536, 898, 981, 1033, 1165
Lsp1109I	GCAGC	7 cut(s)	16, 375, 406, 409, 690, 1006, 1028
LweI	GCATC	5 cut(s)	165, 187, 426, 852, 1361
MaeII	ACGT	3 cut(s)	470, 543, 1280
MaeIII	GTNAC	4 cut(s)	1064, 1159, 1283, 1421
MalI	GATC	4 cut(s)	374, 466, 637, 1204
MbiI	CCGCTC	2 cut(s)	206, 531
MboI	GATC	4 cut(s)	372, 464, 635, 1202
MboII	GAAGA	4 cut(s)	42, 313, 594, 1205
MflI	RGATCY	1 cut(s)	1202
MhlI	GDGCHC	3 cut(s)	784, 1170, 1374
MluCI	AATT	3 cut(s)	186, 965, 1248
MlyI	GAGTC	4 cut(s)	209, 329, 473, 813
MmeI	TCCRAC	5 cut(s)	327, 333, 558, 921, 1380
Mph1103I	ATGCAT	1 cut(s)	180
MseI	TTAA	3 cut(s)	44, 567, 1446
MslI	CAYNNNNRTG	1 cut(s)	1391
MspA1I	CMGCKG	3 cut(s)	419, 1019, 1101
MspI	CCGG	4 cut(s)	381, 387, 752, 1105
MspR9I	CCNGG	5 cut(s)	280, 729, 1076, 1223, 1291
MvaI	CCWGG	5 cut(s)	280, 729, 1076, 1223, 1291
MvnI	CGCG	2 cut(s)	1101, 1454
MwoI	GCNNNNNNNGC	8 cut(s)	347, 422, 425, 428, 1008, 1025, 1098, 1349
NcoI	CCATGG	1 cut(s)	495
NdeII	GATC	4 cut(s)	372, 464, 635, 1202
NmeAIII	GCCGAG	1 cut(s)	240
NmuCI	GTSAC	3 cut(s)	1064, 1159, 1283
NsiI	ATGCAT	1 cut(s)	180
NspI	RCATGY	1 cut(s)	1390
PaeR7I	CTCGAG	1 cut(s)	239
PagI	TCATGA	1 cut(s)	453
PcsI	WCGNNNNNNNCGW	5 cut(s)	237, 546, 1431, 1440, 1458
PfeI	GAWTC	1 cut(s)	870
PflFI	GACNNNGTC	2 cut(s)	314, 545
PleI	GAGTC	4 cut(s)	209, 329, 473, 812
PmaCI	CACGTG	1 cut(s)	1281
PmlI	CACGTG	1 cut(s)	1281
PpsI	GAGTC	4 cut(s)	209, 329, 473, 812
Ppu21I	YACGTR	1 cut(s)	1281
PpuMI	RGGWCCY	1 cut(s)	1095
PshAI	GACNNNNGTC	1 cut(s)	1460
Psp5II	RGGWCCY	1 cut(s)	1095
Psp6I	CCWGG	5 cut(s)	278, 727, 1074, 1221, 1289
PspCI	CACGTG	1 cut(s)	1281
PspFI	CCCAGC	1 cut(s)	1382
PspGI	CCWGG	5 cut(s)	278, 727, 1074, 1221, 1289
PspOMI	GGGCCC	1 cut(s)	1370
PspPI	GGNCC	7 cut(s)	263, 282, 725, 749, 1095, 1370, 1371
PspPPI	RGGWCCY	1 cut(s)	1095
PspXI	VCTCGAGB	1 cut(s)	239
PstI	CTGCAG	2 cut(s)	708, 897
PstNI	CAGNNNCTG	2 cut(s)	901, 1022
PsuI	RGATCY	1 cut(s)	1202
PsyI	GACNNNGTC	2 cut(s)	314, 545
PvuII	CAGCTG	1 cut(s)	1019
RsaI	GTAC	1 cut(s)	1217
RsaNI	GTAC	1 cut(s)	1216
RseI	CAYNNNNRTG	1 cut(s)	1391
SacII	CCGCGG	1 cut(s)	1102
SalI	GTCGAC	1 cut(s)	1433
SaqAI	TTAA	3 cut(s)	44, 567, 1446
Sau3AI	GATC	4 cut(s)	372, 464, 635, 1202
Sau96I	GGNCC	7 cut(s)	263, 282, 725, 749, 1095, 1370, 1371
SchI	GAGTC	4 cut(s)	209, 329, 473, 813
ScrFI	CCNGG	5 cut(s)	280, 729, 1076, 1223, 1291
SduI	GDGCHC	3 cut(s)	784, 1170, 1374
SfaNI	GCATC	5 cut(s)	165, 187, 426, 852, 1361
SfcI	CTRYAG	2 cut(s)	704, 893
Sfr274I	CTCGAG	1 cut(s)	239
Sfr303I	CCGCGG	1 cut(s)	1102
SgrBI	CCGCGG	1 cut(s)	1102
SinI	GGWCC	3 cut(s)	725, 749, 1095
SlaI	CTCGAG	1 cut(s)	239
SmiMI	CAYNNNNRTG	1 cut(s)	1391
SmlI	CTYRAG	1 cut(s)	239
SmoI	CTYRAG	1 cut(s)	239
Sse9I	AATT	3 cut(s)	186, 965, 1248
StyD4I	CCNGG	5 cut(s)	278, 727, 1074, 1221, 1289
StyI	CCWWGG	3 cut(s)	495, 745, 1254
TaaI	ACNGT	6 cut(s)	1070, 1159, 1361, 1402, 1427, 1439
TaiI	ACGT	3 cut(s)	473, 546, 1283
TaqI	TCGA	5 cut(s)	213, 240, 549, 954, 1434
TasI	AATT	3 cut(s)	186, 965, 1248
TauI	GCSGC	6 cut(s)	298, 419, 428, 431, 737, 1104
TfiI	GAWTC	1 cut(s)	870
Tru1I	TTAA	3 cut(s)	44, 567, 1446
Tru9I	TTAA	3 cut(s)	44, 567, 1446
TscAI	CASTG	4 cut(s)	645, 835, 1087, 1279
TseFI	GTSAC	3 cut(s)	1064, 1159, 1283
TseI	GCWGC	7 cut(s)	4, 363, 419, 422, 703, 1016, 1019
Tsp45I	GTSAC	3 cut(s)	1064, 1159, 1283
TspDTI	ATGAA	4 cut(s)	47, 755, 899, 960
TspGWI	ACGGA	6 cut(s)	531, 874, 1178, 1381, 1432, 1450
TspRI	CASTG	4 cut(s)	645, 835, 1087, 1279
Tth111I	GACNNNGTC	2 cut(s)	314, 545
VneI	GTGCAC	1 cut(s)	780
VpaK11BI	GGWCC	3 cut(s)	725, 749, 1095
XagI	CCTNNNNNAGG	2 cut(s)	585, 693
XapI	RAATTY	2 cut(s)	186, 965
XceI	RCATGY	1 cut(s)	1390
XhoI	CTCGAG	1 cut(s)	239
XmiI	GTMKAC	1 cut(s)	1434
ZraI	GACGTC	1 cut(s)	544
Zsp2I	ATGCAT	1 cut(s)	180

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.