MD02G1009200.v1.1

Transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0009533
Physical Location & Seq
Reverse (-)
608788 .. 613382
4595 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1009200.v1.1.491

Sequence Viewer

Length: 1416 bp
ATGCAGCCTTGTAGCAGAGAAATGCAGGAAATGAACTCCTTGTTGAGAGAAATGCAGGAAATGAACTCCTTGTTGAACTCCTCAGCCTCCTCCTCCCAACTCTCCCTCCAAGACCACCACCACCTCCAACAACAACCACACTCTCACTCCCAGATGCATCATCAAATTCCAACCCCCTCCGCCTCCCACTTCGACTCCGCCACCCACGACGACTTCCTCGAGCAAATGCTCTCCACCCTCGGCCCCTCCTGGGCCTCTGCCGCCGACGATGCCCCGCCTCCGCTCTCCTCCAACCCCGACAATGTCGTCTTCTCTTACGACGACTCCGCCACCCTCGCCGCCAAGTTTCGCAGCCAGCAGATCAGCGCCGGTTCCGGCGCTAACAAGTCCGCCTCCGCATCAGCCGCAGCTGCTGCCGCCATGATGCTCCAGCACCAGCTCATGATGTCCAGATCAGGCGCTGCCGACTCCGGCTTTGGTCCCACGGGATTGTCTTTGGGAAACAACGGCGACTTTGGCCGCTCCAACAACGACGTCGGCGACGGCTCCTCCTTCAAATCCCCCAATCAAGTGGTGAGGCGCCGATGGGGCTTCTTCCGTTCAATCCCTGTTCAATGGCTTCGGTGCATCACTGCATGGAGCTGCGAATTCTCAGGAGGTCAGCTGCAAGCGCAGAACTACGGAGGTGCAGGGGCGGCGTTGAACCAAGCTCCGGCGGGTGGCTCGGCTGGGGCAGCGCCGGTCCAACCGAGGCCCAGAGTCAGGGCGAGAAGAGGTCAAGCCACTGACCCACACAGCATAGCCGAAAGATTACGGAGAGAGAGAATTGCAGAGAGGATGAAGGCTCTGCAGGAGCTCGTTCCCAATGCCAACAAGGCAGACAAAGCTTCAATGCTGGATGAGATAATCGATTATGTAAAATTCCTCCAGCTCCAAGTCAAGGTTCTGAGCATGAGCAGGTTGGGCGGTGCAGCTGCTGTTGCTCCCCTTGTTGCTGATATGTCCTCTGAGGGTGGCGGTGACTGTATCCAAGCCAGTGCCAACGGCGGGACCCGCGGACGGAGCTCAAACGGCAACCAAACGGCCTCCTCATCCAACGACAACAGCATGACGGTGACGGAACACCAAGTCGCCAAGCTCATGGAGAAAGACATGGGCTCCGCCATGCAGTACCTCCAGGGAAAAGGCCTCTGCCTCATGCCGATTTCGTTGGCCACCGCCATCTCCACCGCCACATGTCACTCCAGGAACCCCCTCCTCCACAACAACAGCAACAACCACCAAGTTGTCCCGTCCAACGGCGGTGACGGGCCCTCCTCTCCCAGCATGTCCGTGCTGACAGTCCAGTCAGCCACCATGGGCAACGGCGGGGTTGACGGTTCCGTCAAAGACGCCACCTCCGTCTCCAAGCCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000976 GO:0000981 GO:0001046 GO:0001047 GO:0001067 GO:0001228 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0007275 GO:0007276 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009555 GO:0009653 GO:0009888 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016049 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019953 GO:0021700 GO:0022412 GO:0022414 GO:0022622 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0032504 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0040007 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0044703 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048229 GO:0048232 GO:0048235 GO:0048364 GO:0048468 GO:0048469 GO:0048518 GO:0048522 GO:0048588 GO:0048589 GO:0048609 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051704 GO:0055046 GO:0060255 GO:0060560 GO:0065007 GO:0071695 GO:0071704 GO:0080090 GO:0080147 GO:0090304 GO:0090558 GO:0090627 GO:0097159 GO:0097659 GO:0099402 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:1905392 GO:1990837 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HLH

Protein Analysis

472

Amino Acids

49.63

Weight (kDa)

6.95

Isoelectric Point (pI)

52.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HLH PF00010 265 - 310 1.7e-09 Helix-loop-helix DNA-binding domain
bHLH_SAC51 PF23173 269 - 313 2.8e-06 Transcription factor SAC51 bHLH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 3 cut(s) 305, 1345, 1382
AatII GACGTC 1 cut(s) 537
Acc36I ACCTGC 1 cut(s) 948
AccB1I GGYRCC 1 cut(s) 579
AccBSI CCGCTC 2 cut(s) 283, 522
AccII CGCG 1 cut(s) 1056
AcoI YGGCCR 2 cut(s) 517, 1212
AcsI RAATTY 3 cut(s) 165, 647, 920
AcyI GRCGYC 3 cut(s) 534, 580, 1392
AfaI GTAC 1 cut(s) 1172
AfiI CCNNNNNNNGG 8 cut(s) 250, 712, 719, 762, 940, 1047, 1059, 1298
AflIII ACRYGT 1 cut(s) 1235
AgsI TTSAA 6 cut(s) 76, 556, 603, 614, 703, 891
AjnI CCWGG 3 cut(s) 248, 1176, 1244
AjuI GAANNNNNNNTTGG 2 cut(s) 927, 959
Alw21I GWGCWC 2 cut(s) 858, 1067
Alw26I GTCTC 1 cut(s) 1408
AlwNI CAGNNNCTG 3 cut(s) 413, 461, 977
Ama87I CYCGRG 1 cut(s) 218
AoxI GGCC 8 cut(s) 241, 252, 517, 752, 1083, 1186, 1212, 1310
ApaI GGGCCC 1 cut(s) 1314
ApoI RAATTY 3 cut(s) 165, 647, 920
ArsI GACNNNNNNTTYG 2 cut(s) 458, 490
AspLEI GCGC 6 cut(s) 368, 380, 461, 582, 673, 739
AspS9I GGNCC 8 cut(s) 242, 252, 479, 742, 753, 1050, 1310, 1311
AsuHPI GGTGA 4 cut(s) 586, 1031, 1126, 1316
AvaI CYCGRG 1 cut(s) 218
AvaII GGWCC 3 cut(s) 479, 742, 1050
BaeGI GKGCMC 1 cut(s) 1314
BalI TGGCCA 1 cut(s) 1214
BanI GGYRCC 1 cut(s) 579
BanII GRGCYC 4 cut(s) 858, 1067, 1160, 1314
BbsI GAAGAC 1 cut(s) 301
Bbv12I GWGCWC 2 cut(s) 858, 1067
BbvCI CCTCAGC 1 cut(s) 82
BccI CCATC 2 cut(s) 579, 1229
BceAI ACGGC 7 cut(s) 523, 559, 1060, 1087, 1098, 1315, 1381
BciT130I CCWGG 3 cut(s) 250, 1178, 1246
BciVI GTATCC 1 cut(s) 1037
BcoDI GTCTC 1 cut(s) 1408
BfmI CTRYAG 1 cut(s) 848
BfoI RGCGCY 5 cut(s) 369, 381, 462, 583, 740
BfuAI ACCTGC 1 cut(s) 948
BfuI GTATCC 1 cut(s) 1037
BglI GCCNNNNNGGC 2 cut(s) 588, 875
Bme1390I CCNGG 3 cut(s) 250, 1178, 1246
Bme18I GGWCC 3 cut(s) 479, 742, 1050
BmeT110I CYCGRG 1 cut(s) 218
BmgT120I GGNCC 8 cut(s) 242, 252, 479, 742, 753, 1050, 1310, 1311
BmrFI CCNGG 3 cut(s) 250, 1178, 1246
BmsI GCATC 6 cut(s) 144, 166, 259, 407, 414, 636
BpiI GAAGAC 1 cut(s) 301
BpmI CTGGAG 4 cut(s) 413, 911, 1160, 1228
Bpu10I CCTNAGC 1 cut(s) 82
Bsa29I ATCGAT 1 cut(s) 909
BsaHI GRCGYC 3 cut(s) 534, 580, 1392
BsaJI CCNNGG 7 cut(s) 238, 249, 483, 749, 1054, 1177, 1356
Bsc4I CCNNNNNNNGG 8 cut(s) 250, 712, 719, 762, 940, 1047, 1059, 1298
Bse118I RCCGGY 2 cut(s) 368, 739
Bse1I ACTGG 2 cut(s) 1035, 1345
BseBI CCWGG 3 cut(s) 250, 1178, 1246
BseCI ATCGAT 1 cut(s) 909
BseDI CCNNGG 7 cut(s) 238, 249, 483, 749, 1054, 1177, 1356
BseGI GGATG 3 cut(s) 843, 904, 1091
BseLI CCNNNNNNNGG 8 cut(s) 250, 712, 719, 762, 940, 1047, 1059, 1298
BseMII CTCAG 4 cut(s) 96, 666, 938, 999
BseNI ACTGG 2 cut(s) 1035, 1345
BseRI GAGGAG 8 cut(s) 70, 79, 82, 277, 538, 1078, 1247, 1306
BseSI GKGCMC 1 cut(s) 1314
BseYI CCCAGC 2 cut(s) 728, 1322
BsgI GTGCAG 2 cut(s) 708, 990
Bsh1236I CGCG 1 cut(s) 1056
BshFI GGCC 8 cut(s) 243, 254, 519, 754, 1085, 1188, 1214, 1312
BshNI GGYRCC 1 cut(s) 579
BshVI ATCGAT 1 cut(s) 909
BsiHKAI GWGCWC 2 cut(s) 858, 1067
BsiHKCI CYCGRG 1 cut(s) 218
BsiSI CCGG 5 cut(s) 369, 375, 471, 713, 740
BslFI GGGAC 3 cut(s) 465, 1063, 1274
BslI CCNNNNNNNGG 8 cut(s) 250, 712, 719, 762, 940, 1047, 1059, 1298
BsmAI GTCTC 1 cut(s) 1408
BsmBI CGTCTC 1 cut(s) 1408
BsmFI GGGAC 3 cut(s) 465, 1063, 1274
BsnI GGCC 8 cut(s) 243, 254, 519, 754, 1085, 1188, 1214, 1312
BsoBI CYCGRG 1 cut(s) 218
Bsp120I GGGCCC 1 cut(s) 1310
Bsp1286I GDGCHC 4 cut(s) 858, 1067, 1160, 1314
Bsp143I GATC 2 cut(s) 360, 452
Bsp19I CCATGG 1 cut(s) 1356
BspANI GGCC 8 cut(s) 243, 254, 519, 754, 1085, 1188, 1214, 1312
BspCNI CTCAG 4 cut(s) 95, 665, 939, 1000
BspDI ATCGAT 1 cut(s) 909
BspFNI CGCG 1 cut(s) 1056
BspHI TCATGA 1 cut(s) 441
BspMAI CTGCAG 1 cut(s) 852
BspMI ACCTGC 1 cut(s) 948
BspT107I GGYRCC 1 cut(s) 579
BsrBI CCGCTC 2 cut(s) 283, 522
BsrFI RCCGGY 2 cut(s) 368, 739
BsrI ACTGG 2 cut(s) 1035, 1345
BssAI RCCGGY 2 cut(s) 368, 739
BssECI CCNNGG 7 cut(s) 238, 249, 483, 749, 1054, 1177, 1356
BssMI GATC 2 cut(s) 360, 452
BssNI GRCGYC 3 cut(s) 534, 580, 1392
BssT1I CCWWGG 1 cut(s) 1356
Bst2UI CCWGG 3 cut(s) 250, 1178, 1246
Bst4CI ACNGT 4 cut(s) 1025, 1114, 1342, 1379
Bst6I CTCTTC 1 cut(s) 766
BstACI GRCGYC 3 cut(s) 534, 580, 1392
BstAPI GCANNNNNTGC 1 cut(s) 413
BstC8I GCNNGC 2 cut(s) 356, 669
BstDEI CTNAG 4 cut(s) 82, 652, 947, 1008
BstDSI CCRYGG 3 cut(s) 483, 1054, 1356
BstF5I GGATG 3 cut(s) 843, 904, 1091
BstFNI CGCG 1 cut(s) 1056
BstH2I RGCGCY 5 cut(s) 369, 381, 462, 583, 740
BstHHI GCGC 6 cut(s) 368, 380, 461, 582, 673, 739
BstKTI GATC 2 cut(s) 363, 455
BstMAI GTCTC 1 cut(s) 1408
BstMBI GATC 2 cut(s) 360, 452
BstNI CCWGG 3 cut(s) 250, 1178, 1246
BstNSI RCATGY 2 cut(s) 1239, 1330
BstSCI CCNGG 3 cut(s) 248, 1176, 1244
BstSFI CTRYAG 1 cut(s) 848
BstSLI GKGCMC 1 cut(s) 1314
BstUI CGCG 1 cut(s) 1056
BstV2I GAAGAC 1 cut(s) 301
BstXI CCANNNNNNTGG 2 cut(s) 571, 1141
Bsu15I ATCGAT 1 cut(s) 909
BsuI GTATCC 1 cut(s) 1037
BsuRI GGCC 8 cut(s) 243, 254, 519, 754, 1085, 1188, 1214, 1312
BsuTUI ATCGAT 1 cut(s) 909
BtgI CCRYGG 3 cut(s) 483, 1054, 1356
BtsCI GGATG 3 cut(s) 843, 904, 1091
BtsI GCAGTG 1 cut(s) 630
BtsIMutI CAGTG 3 cut(s) 630, 783, 1042
BveI ACCTGC 1 cut(s) 948
Cac8I GCNNGC 2 cut(s) 356, 669
CaiI CAGNNNCTG 3 cut(s) 413, 461, 977
CciI TCATGA 1 cut(s) 441
CfoI GCGC 6 cut(s) 368, 380, 461, 582, 673, 739
Cfr10I RCCGGY 2 cut(s) 368, 739
Cfr13I GGNCC 8 cut(s) 242, 252, 479, 742, 753, 1050, 1310, 1311
Cfr42I CCGCGG 1 cut(s) 1057
ClaI ATCGAT 1 cut(s) 909
CseI GACGC 1 cut(s) 1400
Csp6I GTAC 1 cut(s) 1171
CviQI GTAC 1 cut(s) 1171
DdeI CTNAG 4 cut(s) 82, 652, 947, 1008
DinI GGCGCC 1 cut(s) 581
DpnI GATC 2 cut(s) 362, 454
DpnII GATC 2 cut(s) 360, 452
DrdI GACNNNNNNGTC 3 cut(s) 305, 1345, 1382
DseDI GACNNNNNNGTC 3 cut(s) 305, 1345, 1382
EaeI YGGCCR 2 cut(s) 517, 1212
Eam1104I CTCTTC 1 cut(s) 766
EarI CTCTTC 1 cut(s) 766
EciI GGCGGA 5 cut(s) 169, 187, 316, 379, 1150
Ecl136II GAGCTC 2 cut(s) 856, 1065
Eco130I CCWWGG 1 cut(s) 1356
Eco147I AGGCCT 1 cut(s) 1188
Eco24I GRGCYC 4 cut(s) 858, 1067, 1160, 1314
Eco47I GGWCC 3 cut(s) 479, 742, 1050
Eco53kI GAGCTC 2 cut(s) 856, 1065
Eco88I CYCGRG 1 cut(s) 218
EcoICRI GAGCTC 2 cut(s) 856, 1065
EcoO109I RGGNCCY 2 cut(s) 1050, 1311
EcoRI GAATTC 1 cut(s) 647
EcoRII CCWGG 3 cut(s) 248, 1176, 1244
EcoT14I CCWWGG 1 cut(s) 1356
EcoT22I ATGCAT 1 cut(s) 159
EcoT38I GRGCYC 4 cut(s) 858, 1067, 1160, 1314
EgeI GGCGCC 1 cut(s) 581
EheI GGCGCC 1 cut(s) 581
ErhI CCWWGG 1 cut(s) 1356
Esp3I CGTCTC 1 cut(s) 1408
FaqI GGGAC 3 cut(s) 465, 1063, 1274
FauI CCCGC 5 cut(s) 282, 709, 1040, 1061, 1361
FokI GGATG 3 cut(s) 850, 911, 1078
FriOI GRGCYC 4 cut(s) 858, 1067, 1160, 1314
GlaI GCGC 6 cut(s) 367, 379, 460, 581, 672, 738
GsaI CCCAGC 2 cut(s) 732, 1326
GsuI CTGGAG 4 cut(s) 413, 911, 1160, 1228
HaeII RGCGCY 5 cut(s) 369, 381, 462, 583, 740
HaeIII GGCC 8 cut(s) 243, 254, 519, 754, 1085, 1188, 1214, 1312
HapII CCGG 5 cut(s) 369, 375, 471, 713, 740
HgaI GACGC 1 cut(s) 1400
HhaI GCGC 6 cut(s) 368, 380, 461, 582, 673, 739
Hin1I GRCGYC 3 cut(s) 534, 580, 1392
Hin6I GCGC 6 cut(s) 366, 378, 459, 580, 671, 737
HinP1I GCGC 6 cut(s) 366, 378, 459, 580, 671, 737
HincII GTYRAC 1 cut(s) 1375
HindII GTYRAC 1 cut(s) 1375
HindIII AAGCTT 1 cut(s) 885
HinfI GANTC 4 cut(s) 194, 323, 467, 759
HpaII CCGG 5 cut(s) 369, 375, 471, 713, 740
HphI GGTGA 4 cut(s) 586, 1031, 1126, 1316
Hpy166II GTNNAC 1 cut(s) 1375
Hpy188I TCNGA 2 cut(s) 948, 1009
Hpy188III TCNNGA 3 cut(s) 442, 450, 654
Hpy8I GTNNAC 1 cut(s) 1375
Hpy99I CGWCG 6 cut(s) 212, 269, 323, 536, 539, 545
HpyAV CCTTC 2 cut(s) 562, 835
HpyCH4III ACNGT 4 cut(s) 1025, 1114, 1342, 1379
HpyCH4IV ACGT 1 cut(s) 534
HpyF3I CTNAG 4 cut(s) 82, 652, 947, 1008
HpySE526I ACGT 1 cut(s) 534
Hsp92I GRCGYC 3 cut(s) 534, 580, 1392
HspAI GCGC 6 cut(s) 366, 378, 459, 580, 671, 737
KasI GGCGCC 1 cut(s) 579
KflI GGGWCCC 1 cut(s) 1050
KspI CCGCGG 1 cut(s) 1057
Kzo9I GATC 2 cut(s) 360, 452
LweI GCATC 6 cut(s) 144, 166, 259, 407, 414, 636
MaeII ACGT 1 cut(s) 534
MaeIII GTNAC 4 cut(s) 1019, 1114, 1238, 1304
MalI GATC 2 cut(s) 362, 454
MbiI CCGCTC 2 cut(s) 283, 522
MboI GATC 2 cut(s) 360, 452
MboII GAAGA 3 cut(s) 301, 586, 783
MhlI GDGCHC 4 cut(s) 858, 1067, 1160, 1314
MlsI TGGCCA 1 cut(s) 1214
MluCI AATT 4 cut(s) 165, 647, 825, 920
MluNI TGGCCA 1 cut(s) 1214
Mly113I GGCGCC 1 cut(s) 580
MlyI GAGTC 4 cut(s) 188, 317, 461, 768
MmeI TCCRAC 7 cut(s) 151, 194, 315, 549, 769, 1119, 1320
Mox20I TGGCCA 1 cut(s) 1214
Mph1103I ATGCAT 1 cut(s) 159
MscI TGGCCA 1 cut(s) 1214
MslI CAYNNNNRTG 2 cut(s) 1112, 1331
Msp20I TGGCCA 1 cut(s) 1214
MspA1I CMGCKG 4 cut(s) 410, 664, 974, 1056
MspI CCGG 5 cut(s) 369, 375, 471, 713, 740
MspR9I CCNGG 3 cut(s) 250, 1178, 1246
MvaI CCWGG 3 cut(s) 250, 1178, 1246
MvnI CGCG 1 cut(s) 1056
NarI GGCGCC 1 cut(s) 580
NcoI CCATGG 1 cut(s) 1356
NdeII GATC 2 cut(s) 360, 452
NmeAIII GCCGAG 2 cut(s) 219, 704
NmuCI GTSAC 4 cut(s) 1019, 1114, 1238, 1304
NsiI ATGCAT 1 cut(s) 159
NspI RCATGY 2 cut(s) 1239, 1330
PaeR7I CTCGAG 1 cut(s) 218
PagI TCATGA 1 cut(s) 441
PceI AGGCCT 1 cut(s) 1188
PciI ACATGT 1 cut(s) 1235
PcsI WCGNNNNNNNCGW 3 cut(s) 216, 537, 1398
PflFI GACNNNGTC 1 cut(s) 302
PfoI TCCNGGA 1 cut(s) 1244
PleI GAGTC 4 cut(s) 188, 317, 461, 767
PluTI GGCGCC 1 cut(s) 583
PpsI GAGTC 4 cut(s) 188, 317, 461, 767
PpuMI RGGWCCY 1 cut(s) 1050
PscI ACATGT 1 cut(s) 1235
Psp124BI GAGCTC 2 cut(s) 858, 1067
Psp5II RGGWCCY 1 cut(s) 1050
Psp6I CCWGG 3 cut(s) 248, 1176, 1244
PspFI CCCAGC 2 cut(s) 728, 1322
PspGI CCWGG 3 cut(s) 248, 1176, 1244
PspOMI GGGCCC 1 cut(s) 1310
PspPI GGNCC 8 cut(s) 242, 252, 479, 742, 753, 1050, 1310, 1311
PspPPI RGGWCCY 1 cut(s) 1050
PspXI VCTCGAGB 1 cut(s) 218
PstI CTGCAG 1 cut(s) 852
PstNI CAGNNNCTG 3 cut(s) 413, 461, 977
PsyI GACNNNGTC 1 cut(s) 302
PvuII CAGCTG 3 cut(s) 410, 664, 974
RsaI GTAC 1 cut(s) 1172
RsaNI GTAC 1 cut(s) 1171
RseI CAYNNNNRTG 2 cut(s) 1112, 1331
SacI GAGCTC 2 cut(s) 858, 1067
SacII CCGCGG 1 cut(s) 1057
Sau3AI GATC 2 cut(s) 360, 452
Sau96I GGNCC 8 cut(s) 242, 252, 479, 742, 753, 1050, 1310, 1311
SchI GAGTC 4 cut(s) 188, 317, 461, 768
ScrFI CCNGG 3 cut(s) 250, 1178, 1246
SduI GDGCHC 4 cut(s) 858, 1067, 1160, 1314
SfaNI GCATC 6 cut(s) 144, 166, 259, 407, 414, 636
SfcI CTRYAG 1 cut(s) 848
SfoI GGCGCC 1 cut(s) 581
Sfr274I CTCGAG 1 cut(s) 218
Sfr303I CCGCGG 1 cut(s) 1057
SgrBI CCGCGG 1 cut(s) 1057
SinI GGWCC 3 cut(s) 479, 742, 1050
SlaI CTCGAG 1 cut(s) 218
SmiMI CAYNNNNRTG 2 cut(s) 1112, 1331
SmlI CTYRAG 1 cut(s) 218
SmoI CTYRAG 1 cut(s) 218
Sse9I AATT 4 cut(s) 165, 647, 825, 920
SseBI AGGCCT 1 cut(s) 1188
SspDI GGCGCC 1 cut(s) 579
SstI GAGCTC 2 cut(s) 858, 1067
StuI AGGCCT 1 cut(s) 1188
StyD4I CCNGG 3 cut(s) 248, 1176, 1244
StyI CCWWGG 1 cut(s) 1356
TaaI ACNGT 4 cut(s) 1025, 1114, 1342, 1379
TaiI ACGT 1 cut(s) 537
TaqI TCGA 3 cut(s) 192, 219, 909
TasI AATT 4 cut(s) 165, 647, 825, 920
TauI GCSGC 6 cut(s) 263, 341, 407, 419, 522, 698
TscAI CASTG 3 cut(s) 637, 790, 1042
TseFI GTSAC 4 cut(s) 1019, 1114, 1238, 1304
Tsp45I GTSAC 4 cut(s) 1019, 1114, 1238, 1304
TspDTI ATGAA 3 cut(s) 47, 77, 854
TspGWI ACGGA 8 cut(s) 587, 696, 829, 1075, 1133, 1321, 1372, 1390
TspRI CASTG 3 cut(s) 637, 790, 1042
Tth111I GACNNNGTC 1 cut(s) 302
VpaK11BI GGWCC 3 cut(s) 479, 742, 1050
XapI RAATTY 3 cut(s) 165, 647, 920
XceI RCATGY 2 cut(s) 1239, 1330
XhoI CTCGAG 1 cut(s) 218
ZraI GACGTC 1 cut(s) 535
Zsp2I ATGCAT 1 cut(s) 159
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.