RLG00000015726

Transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0009533
Physical Location & Seq
Reverse (-)
1048002 .. 1050830
2829 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000015726

Sequence Viewer

Length: 1287 bp
ATGAACTCTCTGCTAAACCCCCAGACGCCGTTCGACTCCTCCGCCCACGACGACTTCCTCGAGCAAATGCTCTCCACCCTCGGCCCCTCCTCCTGCTCCTCCTGGGCCGACGAAACCCCTCCGGCGCCTCCGTCCGCCGGTAACAGCGACAACAATGTCGTCTTCTCTTACGACGACTCTTCCAACCTCGCCTCCAAGTTCCGCAGCCACCAGATCAGCGCCGGCGCTGCAGCGTCCAAGTCTTCCCCCACTGCCTCGGCCGCAGCCGCTGCCGCCATGATGCTCCAGCACCAGCTCATGATGTCCCGTGGAGGCTCCTCCTCCTCCGGCAACGGCAACTGCAACGGCGCTCCGATGGGGTTGTCGTTGGGGAGCAACGGTGACTTCAACGATGTTGGTGACGGCTCGTCGTTTAAATCTCCTAATCCGGGCGGTGGTGACGGTGGTTCTTCTGTTCAGGCCTTGTTTAATGGCTTTACTGGATCTCTGTCTCCGAACCAGCCTCAGCATTTTCATCACCCTCAGGGAGGTGCACTTCAAGCGCAGAACTATGGAGCTCAAGCCGCAGCCATGACCCAACCTCCGGCGAACGGCTCGGCCGGAGCTTCGGCTGCGCAACCCAGGCCCAGAGTCAGGGCCAGGCGAGGTCAAGCCACTGACCCTCACTCCATCGCTGAAAGATTACGAAGAGAGAGAATTGCAGAGAGAATGAAAGCCCTGCAGGAGCTGGTTCCCAATGCCAACAAGACAGATAAGGCTTCAATGCTAGATGAGATCATCGATTATGTAAAGTTCCTGCAGCTCCAAGTCAAGGTTCTGAGCATGAGCAGGTTGGGTGGTGCTGGTGCTGTTGCTCCCCTTGTCACTGATATGTCCTCTGAGGGAGGCGGTGACTGTATCCAGACCAGTGCCAATGGCGGGACCCGCGGAGGCCGGAGCGGCAACCAAACGGCGTCGTCCAACGACAGCATGACGGTGACGGAGCACCAGGTGGCCAAGCTCATGGAGGAGGACATGGGCTCCGCCATGCAGTACCTACAGGGCAAAGGTCTCTGCCTCATGCCTATCTCCTTGGCCACGGCTATCTCCACCGCCACGTGTCACACCCGGAACCCACTGATGATGAATGGCAACAGCAACAACAACCACCCGGTCATTACATCCAACGCCGGAGAGGGGCCGTCGTCTCCCAGCATGTCAGTGTTGACCGTCCAGTCAGCCACGATGGCCAGTAACGGCGGCGTTGACGGCTCCGGTAAAGACGCCGCCTCCGTCTCCAAGCCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000976 GO:0000981 GO:0001046 GO:0001047 GO:0001067 GO:0001228 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0007275 GO:0007276 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009555 GO:0009653 GO:0009888 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016049 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019953 GO:0021700 GO:0022412 GO:0022414 GO:0022622 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0032504 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0040007 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0044703 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048229 GO:0048232 GO:0048235 GO:0048364 GO:0048468 GO:0048469 GO:0048518 GO:0048522 GO:0048588 GO:0048589 GO:0048609 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051704 GO:0055046 GO:0060255 GO:0060560 GO:0065007 GO:0071695 GO:0071704 GO:0080090 GO:0080147 GO:0090304 GO:0090558 GO:0090627 GO:0097159 GO:0097659 GO:0099402 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:1905392 GO:1990837 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HLH

Protein Analysis

429

Amino Acids

43.81

Weight (kDa)

6.05

Isoelectric Point (pI)

45.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HLH PF00010 222 - 267 7.4e-10 Helix-loop-helix DNA-binding domain
bHLH_SAC51 PF23173 226 - 270 2e-06 Transcription factor SAC51 bHLH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 155, 1213
Acc16I TGCGCA 1 cut(s) 615
Acc36I ACCTGC 1 cut(s) 819
AccB1I GGYRCC 1 cut(s) 124
AccBSI CCGCTC 1 cut(s) 939
AccII CGCG 1 cut(s) 927
AclWI GGATC 1 cut(s) 490
AcoI YGGCCR 5 cut(s) 258, 597, 993, 1074, 1227
AcvI CACGTG 1 cut(s) 1098
AcyI GRCGYC 4 cut(s) 26, 125, 953, 1263
AdeI CACNNNGTG 1 cut(s) 991
AfaI GTAC 1 cut(s) 1034
AflIII ACRYGT 1 cut(s) 1097
AgsI TTSAA 3 cut(s) 388, 539, 762
AhdI GACNNNNNGTC 1 cut(s) 406
AjnI CCWGG 4 cut(s) 101, 620, 638, 987
AjuI GAANNNNNNNTTGG 2 cut(s) 798, 830
AluBI AGCT 6 cut(s) 295, 557, 605, 727, 802, 1000
AluI AGCT 6 cut(s) 295, 557, 605, 727, 802, 1000
Alw21I GWGCWC 3 cut(s) 535, 559, 987
Alw26I GTCTC 4 cut(s) 495, 1055, 1191, 1279
Alw44I GTGCAC 1 cut(s) 531
AlwI GGATC 1 cut(s) 490
AlwNI CAGNNNCTG 2 cut(s) 269, 727
Ama87I CYCGRG 1 cut(s) 59
ApaLI GTGCAC 1 cut(s) 531
ApeKI GCWGC 8 cut(s) 204, 227, 230, 263, 269, 566, 611, 799
AspLEI GCGC 6 cut(s) 127, 221, 227, 350, 544, 616
AspS9I GGNCC 6 cut(s) 83, 105, 624, 636, 921, 1178
AsuC2I CCSGG 3 cut(s) 429, 1108, 1151
AsuHPI GGTGA 6 cut(s) 392, 410, 449, 509, 902, 988
AvaI CYCGRG 1 cut(s) 59
AvaII GGWCC 1 cut(s) 921
AxyI CCTNAGG 1 cut(s) 522
BaeGI GKGCMC 1 cut(s) 535
BalI TGGCCA 3 cut(s) 995, 1076, 1229
BanI GGYRCC 1 cut(s) 124
BanII GRGCYC 2 cut(s) 559, 1022
BbrPI CACGTG 1 cut(s) 1098
BbsI GAAGAC 2 cut(s) 154, 234
Bbv12I GWGCWC 3 cut(s) 535, 559, 987
BbvCI CCTCAGC 1 cut(s) 504
BbvI GCAGC 8 cut(s) 214, 216, 242, 256, 275, 578, 598, 811
BccI CCATC 3 cut(s) 349, 677, 1219
BciT130I CCWGG 4 cut(s) 103, 622, 640, 989
BciVI GTATCC 1 cut(s) 908
BcnI CCSGG 3 cut(s) 429, 1108, 1151
BcoDI GTCTC 4 cut(s) 495, 1055, 1191, 1279
BfaI CTAG 1 cut(s) 767
BfmI CTRYAG 4 cut(s) 228, 719, 797, 1037
BfoI RGCGCY 4 cut(s) 128, 222, 228, 351
BfuAI ACCTGC 1 cut(s) 819
BfuI GTATCC 1 cut(s) 908
BglI GCCNNNNNGGC 2 cut(s) 939, 1226
Bme1390I CCNGG 7 cut(s) 103, 429, 622, 640, 989, 1108, 1151
Bme18I GGWCC 1 cut(s) 921
BmeRI GACNNNNNGTC 1 cut(s) 406
BmeT110I CYCGRG 1 cut(s) 59
BmgT120I GGNCC 6 cut(s) 83, 105, 624, 636, 921, 1178
BmrFI CCNGG 7 cut(s) 103, 429, 622, 640, 989, 1108, 1151
BmsI GCATC 1 cut(s) 270
BpiI GAAGAC 2 cut(s) 154, 234
BpmI CTGGAG 1 cut(s) 269
Bpu10I CCTNAGC 1 cut(s) 504
BpuEI CTTGAG 1 cut(s) 543
BpuMI CCSGG 3 cut(s) 429, 1108, 1151
Bsa29I ATCGAT 1 cut(s) 780
BsaAI YACGTR 1 cut(s) 1098
BsaHI GRCGYC 4 cut(s) 26, 125, 953, 1263
BsaI GGTCTC 1 cut(s) 1055
BsaJI CCNNGG 8 cut(s) 79, 102, 255, 307, 620, 925, 1071, 1077
BsaWI WCCGGW 1 cut(s) 1253
Bse118I RCCGGY 2 cut(s) 137, 221
Bse1I ACTGG 4 cut(s) 484, 906, 1213, 1230
Bse21I CCTNAGG 1 cut(s) 522
BseBI CCWGG 4 cut(s) 103, 622, 640, 989
BseCI ATCGAT 1 cut(s) 780
BseDI CCNNGG 8 cut(s) 79, 102, 255, 307, 620, 925, 1071, 1077
BseGI GGATG 1 cut(s) 1160
BseMII CTCAG 4 cut(s) 518, 536, 809, 870
BseNI ACTGG 4 cut(s) 484, 906, 1213, 1230
BseRI GAGGAG 7 cut(s) 28, 79, 88, 307, 310, 313, 1022
BseSI GKGCMC 1 cut(s) 535
BseX3I CGGCCG 2 cut(s) 258, 597
BseXI GCAGC 8 cut(s) 214, 216, 242, 256, 275, 578, 598, 811
BseYI CCCAGC 1 cut(s) 1190
Bsh1236I CGCG 1 cut(s) 927
Bsh1285I CGRYCG 2 cut(s) 261, 600
BshNI GGYRCC 1 cut(s) 124
BshVI ATCGAT 1 cut(s) 780
BsiEI CGRYCG 2 cut(s) 261, 600
BsiHKAI GWGCWC 3 cut(s) 535, 559, 987
BsiHKCI CYCGRG 1 cut(s) 59
BslFI GGGAC 2 cut(s) 289, 934
BsmAI GTCTC 4 cut(s) 495, 1055, 1191, 1279
BsmBI CGTCTC 2 cut(s) 1191, 1279
BsmFI GGGAC 2 cut(s) 289, 934
Bso31I GGTCTC 1 cut(s) 1055
BsoBI CYCGRG 1 cut(s) 59
Bsp1286I GDGCHC 4 cut(s) 535, 559, 987, 1022
Bsp143I GATC 3 cut(s) 213, 482, 774
BspCNI CTCAG 4 cut(s) 517, 535, 810, 871
BspDI ATCGAT 1 cut(s) 780
BspFNI CGCG 1 cut(s) 927
BspHI TCATGA 1 cut(s) 297
BspMAI CTGCAG 3 cut(s) 232, 723, 801
BspMI ACCTGC 1 cut(s) 819
BspPI GGATC 1 cut(s) 490
BspT107I GGYRCC 1 cut(s) 124
BspTNI GGTCTC 1 cut(s) 1055
BsrBI CCGCTC 1 cut(s) 939
BsrFI RCCGGY 2 cut(s) 137, 221
BsrI ACTGG 4 cut(s) 484, 906, 1213, 1230
BssAI RCCGGY 2 cut(s) 137, 221
BssECI CCNNGG 8 cut(s) 79, 102, 255, 307, 620, 925, 1071, 1077
BssMI GATC 3 cut(s) 213, 482, 774
BssNI GRCGYC 4 cut(s) 26, 125, 953, 1263
BssT1I CCWWGG 1 cut(s) 1071
Bst2UI CCWGG 4 cut(s) 103, 622, 640, 989
Bst4CI ACNGT 5 cut(s) 380, 443, 896, 976, 1210
Bst6I CTCTTC 2 cut(s) 184, 682
BstACI GRCGYC 4 cut(s) 26, 125, 953, 1263
BstAPI GCANNNNNTGC 1 cut(s) 269
BstBAI YACGTR 1 cut(s) 1098
BstC8I GCNNGC 1 cut(s) 223
BstDEI CTNAG 4 cut(s) 504, 522, 818, 879
BstDSI CCRYGG 3 cut(s) 307, 925, 1077
BstENI CCTNNNNNAGG 1 cut(s) 525
BstF5I GGATG 1 cut(s) 1160
BstFNI CGCG 1 cut(s) 927
BstH2I RGCGCY 4 cut(s) 128, 222, 228, 351
BstHHI GCGC 6 cut(s) 127, 221, 227, 350, 544, 616
BstKTI GATC 3 cut(s) 216, 485, 777
BstMAI GTCTC 4 cut(s) 495, 1055, 1191, 1279
BstMBI GATC 3 cut(s) 213, 482, 774
BstMCI CGRYCG 2 cut(s) 261, 600
BstNI CCWGG 4 cut(s) 103, 622, 640, 989
BstNSI RCATGY 1 cut(s) 1198
BstSCI CCNGG 7 cut(s) 101, 427, 620, 638, 987, 1106, 1149
BstSFI CTRYAG 4 cut(s) 228, 719, 797, 1037
BstSLI GKGCMC 1 cut(s) 535
BstUI CGCG 1 cut(s) 927
BstV1I GCAGC 8 cut(s) 214, 216, 242, 256, 275, 578, 598, 811
BstV2I GAAGAC 2 cut(s) 154, 234
BstX2I RGATCY 1 cut(s) 482
BstXI CCANNNNNNTGG 1 cut(s) 1003
BstYI RGATCY 1 cut(s) 482
BstZI CGGCCG 2 cut(s) 258, 597
Bsu15I ATCGAT 1 cut(s) 780
Bsu36I CCTNAGG 1 cut(s) 522
BsuI GTATCC 1 cut(s) 908
BsuTUI ATCGAT 1 cut(s) 780
BtgI CCRYGG 3 cut(s) 307, 925, 1077
BtgZI GCGATG 1 cut(s) 655
BtsCI GGATG 1 cut(s) 1160
BtsI GCAGTG 1 cut(s) 249
BtsIMutI CAGTG 6 cut(s) 249, 654, 864, 913, 1115, 1206
BveI ACCTGC 1 cut(s) 819
Cac8I GCNNGC 1 cut(s) 223
CaiI CAGNNNCTG 2 cut(s) 269, 727
CciI TCATGA 1 cut(s) 297
CfoI GCGC 6 cut(s) 127, 221, 227, 350, 544, 616
Cfr10I RCCGGY 2 cut(s) 137, 221
Cfr13I GGNCC 6 cut(s) 83, 105, 624, 636, 921, 1178
Cfr42I CCGCGG 1 cut(s) 928
ClaI ATCGAT 1 cut(s) 780
CseI GACGC 4 cut(s) 34, 222, 942, 1271
CsiI ACCWGGT 1 cut(s) 987
Csp6I GTAC 1 cut(s) 1033
CviQI GTAC 1 cut(s) 1033
DdeI CTNAG 4 cut(s) 504, 522, 818, 879
DinI GGCGCC 1 cut(s) 126
DpnI GATC 3 cut(s) 215, 484, 776
DpnII GATC 3 cut(s) 213, 482, 774
DraI TTTAAA 1 cut(s) 415
DraIII CACNNNGTG 1 cut(s) 991
DrdI GACNNNNNNGTC 2 cut(s) 155, 1213
DriI GACNNNNNGTC 1 cut(s) 406
DseDI GACNNNNNNGTC 2 cut(s) 155, 1213
EaeI YGGCCR 5 cut(s) 258, 597, 993, 1074, 1227
EagI CGGCCG 2 cut(s) 258, 597
Eam1104I CTCTTC 2 cut(s) 184, 682
Eam1105I GACNNNNNGTC 1 cut(s) 406
EarI CTCTTC 2 cut(s) 184, 682
EciI GGCGGA 3 cut(s) 31, 124, 1012
Ecl136II GAGCTC 1 cut(s) 557
EclXI CGGCCG 2 cut(s) 258, 597
Eco130I CCWWGG 1 cut(s) 1071
Eco147I AGGCCT 1 cut(s) 461
Eco24I GRGCYC 2 cut(s) 559, 1022
Eco31I GGTCTC 1 cut(s) 1055
Eco47I GGWCC 1 cut(s) 921
Eco52I CGGCCG 2 cut(s) 258, 597
Eco53kI GAGCTC 1 cut(s) 557
Eco72I CACGTG 1 cut(s) 1098
Eco81I CCTNAGG 1 cut(s) 522
Eco88I CYCGRG 1 cut(s) 59
EcoICRI GAGCTC 1 cut(s) 557
EcoNI CCTNNNNNAGG 1 cut(s) 525
EcoO109I RGGNCCY 1 cut(s) 921
EcoRII CCWGG 4 cut(s) 101, 620, 638, 987
EcoT14I CCWWGG 1 cut(s) 1071
EcoT38I GRGCYC 2 cut(s) 559, 1022
EgeI GGCGCC 1 cut(s) 126
EheI GGCGCC 1 cut(s) 126
ErhI CCWWGG 1 cut(s) 1071
Esp3I CGTCTC 2 cut(s) 1191, 1279
FaqI GGGAC 2 cut(s) 289, 934
FauI CCCGC 2 cut(s) 911, 932
FokI GGATG 1 cut(s) 1147
FriOI GRGCYC 2 cut(s) 559, 1022
FspBI CTAG 1 cut(s) 767
FspI TGCGCA 1 cut(s) 615
GlaI GCGC 6 cut(s) 126, 220, 226, 349, 543, 615
GsaI CCCAGC 1 cut(s) 1194
GsuI CTGGAG 1 cut(s) 269
HaeII RGCGCY 4 cut(s) 128, 222, 228, 351
HgaI GACGC 4 cut(s) 34, 222, 942, 1271
HhaI GCGC 6 cut(s) 127, 221, 227, 350, 544, 616
Hin1I GRCGYC 4 cut(s) 26, 125, 953, 1263
Hin6I GCGC 6 cut(s) 125, 219, 225, 348, 542, 614
HinP1I GCGC 6 cut(s) 125, 219, 225, 348, 542, 614
HincII GTYRAC 2 cut(s) 1206, 1246
HindII GTYRAC 2 cut(s) 1206, 1246
HinfI GANTC 3 cut(s) 35, 176, 630
HphI GGTGA 6 cut(s) 392, 410, 449, 509, 902, 988
Hpy166II GTNNAC 3 cut(s) 533, 1206, 1246
Hpy188I TCNGA 4 cut(s) 354, 495, 819, 880
Hpy188III TCNNGA 2 cut(s) 298, 901
Hpy8I GTNNAC 3 cut(s) 533, 1206, 1246
Hpy99I CGWCG 6 cut(s) 53, 113, 176, 412, 958, 1186
HpyCH4III ACNGT 5 cut(s) 380, 443, 896, 976, 1210
HpyCH4IV ACGT 1 cut(s) 1097
HpyCH4V TGCA 7 cut(s) 230, 342, 533, 701, 721, 799, 1030
HpyF3I CTNAG 4 cut(s) 504, 522, 818, 879
HpySE526I ACGT 1 cut(s) 1097
Hsp92I GRCGYC 4 cut(s) 26, 125, 953, 1263
HspAI GCGC 6 cut(s) 125, 219, 225, 348, 542, 614
KasI GGCGCC 1 cut(s) 124
KflI GGGWCCC 1 cut(s) 921
KroI GCCGGC 1 cut(s) 221
KroNI GCCGGC 1 cut(s) 223
KspI CCGCGG 1 cut(s) 928
Kzo9I GATC 3 cut(s) 213, 482, 774
Lsp1109I GCAGC 8 cut(s) 214, 216, 242, 256, 275, 578, 598, 811
LweI GCATC 1 cut(s) 270
MabI ACCWGGT 1 cut(s) 987
MaeI CTAG 1 cut(s) 767
MaeII ACGT 1 cut(s) 1097
MaeIII GTNAC 9 cut(s) 140, 380, 398, 437, 862, 890, 976, 1100, 1232
MalI GATC 3 cut(s) 215, 484, 776
MbiI CCGCTC 1 cut(s) 939
MboI GATC 3 cut(s) 213, 482, 774
MboII GAAGA 5 cut(s) 154, 171, 234, 441, 699
MflI RGATCY 1 cut(s) 482
MhlI GDGCHC 4 cut(s) 535, 559, 987, 1022
MlsI TGGCCA 3 cut(s) 995, 1076, 1229
MluCI AATT 1 cut(s) 696
MluNI TGGCCA 3 cut(s) 995, 1076, 1229
Mly113I GGCGCC 1 cut(s) 125
MlyI GAGTC 3 cut(s) 29, 170, 639
MmeI TCCRAC 3 cut(s) 207, 984, 1188
Mox20I TGGCCA 3 cut(s) 995, 1076, 1229
MreI CGCCGGCG 1 cut(s) 221
MroNI GCCGGC 1 cut(s) 221
MscI TGGCCA 3 cut(s) 995, 1076, 1229
MseI TTAA 2 cut(s) 414, 468
MslI CAYNNNNRTG 3 cut(s) 869, 974, 1199
Msp20I TGGCCA 3 cut(s) 995, 1076, 1229
MspA1I CMGCKG 2 cut(s) 269, 927
MspR9I CCNGG 7 cut(s) 103, 429, 622, 640, 989, 1108, 1151
MvaI CCWGG 4 cut(s) 103, 622, 640, 989
MvnI CGCG 1 cut(s) 927
NaeI GCCGGC 1 cut(s) 223
NarI GGCGCC 1 cut(s) 125
NciI CCSGG 3 cut(s) 429, 1108, 1151
NdeII GATC 3 cut(s) 213, 482, 774
NgoMIV GCCGGC 1 cut(s) 221
NmeAIII GCCGAG 3 cut(s) 60, 236, 575
NmuCI GTSAC 7 cut(s) 380, 398, 437, 862, 890, 976, 1100
NsbI TGCGCA 1 cut(s) 615
NspI RCATGY 1 cut(s) 1198
PaeR7I CTCGAG 1 cut(s) 59
PagI TCATGA 1 cut(s) 297
PceI AGGCCT 1 cut(s) 461
PcsI WCGNNNNNNNCGW 2 cut(s) 57, 1269
PdiI GCCGGC 1 cut(s) 223
PleI GAGTC 3 cut(s) 29, 170, 638
PluTI GGCGCC 1 cut(s) 128
PmaCI CACGTG 1 cut(s) 1098
PmlI CACGTG 1 cut(s) 1098
PpsI GAGTC 3 cut(s) 29, 170, 638
Ppu21I YACGTR 1 cut(s) 1098
PpuMI RGGWCCY 1 cut(s) 921
Psp124BI GAGCTC 1 cut(s) 559
Psp5II RGGWCCY 1 cut(s) 921
Psp6I CCWGG 4 cut(s) 101, 620, 638, 987
PspCI CACGTG 1 cut(s) 1098
PspFI CCCAGC 1 cut(s) 1190
PspGI CCWGG 4 cut(s) 101, 620, 638, 987
PspPI GGNCC 6 cut(s) 83, 105, 624, 636, 921, 1178
PspPPI RGGWCCY 1 cut(s) 921
PspXI VCTCGAGB 1 cut(s) 59
PstI CTGCAG 3 cut(s) 232, 723, 801
PstNI CAGNNNCTG 2 cut(s) 269, 727
PsuI RGATCY 1 cut(s) 482
RsaI GTAC 1 cut(s) 1034
RsaNI GTAC 1 cut(s) 1033
RseI CAYNNNNRTG 3 cut(s) 869, 974, 1199
SacI GAGCTC 1 cut(s) 559
SacII CCGCGG 1 cut(s) 928
SaqAI TTAA 2 cut(s) 414, 468
Sau3AI GATC 3 cut(s) 213, 482, 774
Sau96I GGNCC 6 cut(s) 83, 105, 624, 636, 921, 1178
SbfI CCTGCAGG 1 cut(s) 723
SchI GAGTC 3 cut(s) 29, 170, 639
ScrFI CCNGG 7 cut(s) 103, 429, 622, 640, 989, 1108, 1151
SdaI CCTGCAGG 1 cut(s) 723
SduI GDGCHC 4 cut(s) 535, 559, 987, 1022
SexAI ACCWGGT 1 cut(s) 987
SfaNI GCATC 1 cut(s) 270
SfcI CTRYAG 4 cut(s) 228, 719, 797, 1037
SfoI GGCGCC 1 cut(s) 126
Sfr274I CTCGAG 1 cut(s) 59
Sfr303I CCGCGG 1 cut(s) 928
SgrAI CRCCGGYG 1 cut(s) 221
SgrBI CCGCGG 1 cut(s) 928
SinI GGWCC 1 cut(s) 921
SlaI CTCGAG 1 cut(s) 59
SmiMI CAYNNNNRTG 3 cut(s) 869, 974, 1199
SmlI CTYRAG 2 cut(s) 59, 558
SmoI CTYRAG 2 cut(s) 59, 558
Sse8387I CCTGCAGG 1 cut(s) 723
Sse9I AATT 1 cut(s) 696
SseBI AGGCCT 1 cut(s) 461
SspDI GGCGCC 1 cut(s) 124
SspMI CTAG 1 cut(s) 767
SstI GAGCTC 1 cut(s) 559
StuI AGGCCT 1 cut(s) 461
StyD4I CCNGG 7 cut(s) 101, 427, 620, 638, 987, 1106, 1149
StyI CCWWGG 1 cut(s) 1071
TaaI ACNGT 5 cut(s) 380, 443, 896, 976, 1210
TaiI ACGT 1 cut(s) 1100
TaqI TCGA 3 cut(s) 33, 60, 780
TasI AATT 1 cut(s) 696
TauI GCSGC 7 cut(s) 263, 269, 275, 566, 942, 1242, 1268
Tru1I TTAA 2 cut(s) 414, 468
Tru9I TTAA 2 cut(s) 414, 468
TscAI CASTG 6 cut(s) 256, 661, 871, 913, 1122, 1206
TseFI GTSAC 7 cut(s) 380, 398, 437, 862, 890, 976, 1100
TseI GCWGC 8 cut(s) 204, 227, 230, 263, 269, 566, 611, 799
Tsp45I GTSAC 7 cut(s) 380, 398, 437, 862, 890, 976, 1100
TspDTI ATGAA 4 cut(s) 17, 503, 725, 1139
TspGWI ACGGA 3 cut(s) 120, 995, 1261
TspRI CASTG 6 cut(s) 256, 661, 871, 913, 1122, 1206
VneI GTGCAC 1 cut(s) 531
VpaK11BI GGWCC 1 cut(s) 921
XagI CCTNNNNNAGG 1 cut(s) 525
XceI RCATGY 1 cut(s) 1198
XhoI CTCGAG 1 cut(s) 59
XspI CTAG 1 cut(s) 767
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.