FvH4_1g01320

Calcineurin-like phosphoesterase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0007708
Physical Location & Seq
Reverse (-)
659838 .. 665100
5263 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g01320.t2

Sequence Viewer

Length: 909 bp
ATGGTGATTTTGGTGAAGAGAACATTGAACTGGTTCGGAGTGTTGCAAATCTTGAATTTTCTAAAGCAGTTATTTTGGGAAACCATGATGCATGGCATACAAAGAAGTTTTCAGGAAATTTATGTAGACACGCCTTGTCATCAAATTGGAAGTGTAACTCTGAATATGGTGATTTTGATTGTCAGGACAAAAGACGGCGTTCAACTTCAGCTAGAATGTCTTGGCGAGGAGCATGTAGCTTATCGACGTTTGGACTATAATACAGTAAAACTGAGCATTGTTGGTGGACGACCTTTTTCAAATGGGGGAAACCAGTTATTTCGAATAAAGCTTCTGTCTGCGAGATATGGAGTCCAAGACATGGATGGAAGTGCTAAGAGAATCTGCAAGGCAGCTTTGGGTGCTCCAGAGGACCATATGGTCATTATTCTTGCACACAATGGACCGACAGGTCTTGGTTCTAACTTGGATGACATATGTGGAAAAGACTGGGATTTTGGAGGTGGAGATCATGGTGATGCAGATCTAGCACAGGCCCTATCCCTCCTAAAAGAGTCCGGCAAAATCTGTGTTCCATTGGTAGTGTTTGGTCACATGCATAAACAGCTAGCATATGGAAAAGGTCTTCGGAAAATGATTGTAGTTGGAGCTGACAACACTATATACCTGAACGCAGCCATTGTTCCTAGAGTGAAGAGACTAAATGATGAACAAGGAAGTAGCAAAGAAAGCTGTGTGAACAATGAACCCGGTCTTTCAACTCTGGAGTCCTGTGGCACCATTCGAGCCTTCACTTTGGTTGAGATTTTGGACGGACGAGTAGATAAGATTGTTGAAACTTGGGTTTCTGTTGTGAGTGATAGAACCAAATTGGAAGAGGAGCACATATTATTCAGAAGTGGCAGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Metallophos

Protein Analysis

303

Amino Acids

33.41

Weight (kDa)

6.75

Isoelectric Point (pI)

37.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Metallophos PF00149 31 - 240 1.6e-13 Calcineurin-like phosphoesterase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 419, 450
AccB1I GGYRCC 1 cut(s) 776
AccB7I CCANNNNNTGG 1 cut(s) 361
AccI GTMKAC 1 cut(s) 126
AcsI RAATTY 2 cut(s) 55, 117
AcuI CTGAAG 1 cut(s) 191
AfiI CCNNNNNNNGG 1 cut(s) 361
AgsI TTSAA 6 cut(s) 28, 55, 203, 300, 759, 836
AluBI AGCT 7 cut(s) 211, 239, 331, 395, 607, 650, 732
AluI AGCT 7 cut(s) 211, 239, 331, 395, 607, 650, 732
Alw21I GWGCWC 2 cut(s) 406, 885
Alw26I GTCTC 1 cut(s) 691
AoxI GGCC 1 cut(s) 534
ApeKI GCWGC 2 cut(s) 392, 674
ApoI RAATTY 2 cut(s) 55, 117
ArsI GACNNNNNNTTYG 2 cut(s) 479, 511
Asp700I GAANNNNTTC 1 cut(s) 32
AspS9I GGNCC 3 cut(s) 412, 443, 535
AsuC2I CCSGG 1 cut(s) 750
AsuHPI GGTGA 4 cut(s) 16, 25, 181, 527
AsuII TTCGAA 1 cut(s) 322
AsuNHI GCTAGC 1 cut(s) 607
AvaII GGWCC 2 cut(s) 412, 443
BanI GGYRCC 1 cut(s) 776
BbsI GAAGAC 1 cut(s) 617
Bbv12I GWGCWC 2 cut(s) 406, 885
BbvI GCAGC 2 cut(s) 404, 686
BccI CCATC 1 cut(s) 359
BceAI ACGGC 1 cut(s) 211
BcnI CCSGG 1 cut(s) 750
BcoDI GTCTC 1 cut(s) 691
BfaI CTAG 4 cut(s) 212, 527, 608, 687
BglII AGATCT 1 cut(s) 523
BisI GCNGC 2 cut(s) 393, 675
BlsI GCNGC 2 cut(s) 394, 676
Bme1390I CCNGG 1 cut(s) 750
Bme18I GGWCC 2 cut(s) 412, 443
BmgT120I GGNCC 3 cut(s) 412, 443, 535
BmiI GGNNCC 1 cut(s) 778
BmrFI CCNGG 1 cut(s) 750
BmrI ACTGGG 1 cut(s) 499
BmsI GCATC 2 cut(s) 78, 508
BmtI GCTAGC 1 cut(s) 611
BmuI ACTGGG 1 cut(s) 499
BpiI GAAGAC 1 cut(s) 617
BpmI CTGGAG 2 cut(s) 390, 785
Bpu14I TTCGAA 1 cut(s) 322
BpuMI CCSGG 1 cut(s) 750
BsaBI GATNNNNATC 1 cut(s) 522
Bsc4I CCNNNNNNNGG 1 cut(s) 361
Bse1I ACTGG 3 cut(s) 35, 313, 494
Bse8I GATNNNNATC 1 cut(s) 522
BseGI GGATG 2 cut(s) 370, 475
BseJI GATNNNNATC 1 cut(s) 522
BseLI CCNNNNNNNGG 1 cut(s) 361
BseMII CTCAG 1 cut(s) 263
BseNI ACTGG 3 cut(s) 35, 313, 494
BseRI GAGGAG 2 cut(s) 242, 893
BseXI GCAGC 2 cut(s) 404, 686
BshFI GGCC 1 cut(s) 536
BshNI GGYRCC 1 cut(s) 776
BsiHKAI GWGCWC 2 cut(s) 406, 885
BsiSI CCGG 2 cut(s) 558, 750
BslI CCNNNNNNNGG 1 cut(s) 361
BsmAI GTCTC 1 cut(s) 691
BsnI GGCC 1 cut(s) 536
Bsp119I TTCGAA 1 cut(s) 322
Bsp1286I GDGCHC 2 cut(s) 406, 885
Bsp143I GATC 2 cut(s) 508, 523
BspANI GGCC 1 cut(s) 536
BspCNI CTCAG 1 cut(s) 264
BspLI GGNNCC 1 cut(s) 778
BspOI GCTAGC 1 cut(s) 611
BspT104I TTCGAA 1 cut(s) 322
BspT107I GGYRCC 1 cut(s) 776
BsrI ACTGG 3 cut(s) 35, 313, 494
BssMI GATC 2 cut(s) 508, 523
Bst4CI ACNGT 1 cut(s) 265
Bst6I CTCTTC 3 cut(s) 11, 689, 870
BstBI TTCGAA 1 cut(s) 322
BstC8I GCNNGC 1 cut(s) 609
BstDEI CTNAG 2 cut(s) 272, 375
BstF5I GGATG 2 cut(s) 370, 475
BstKTI GATC 2 cut(s) 511, 526
BstMAI GTCTC 1 cut(s) 691
BstMBI GATC 2 cut(s) 508, 523
BstMWI GCNNNNNNNGC 4 cut(s) 401, 527, 604, 729
BstNSI RCATGY 2 cut(s) 236, 598
BstSCI CCNGG 1 cut(s) 748
BstV1I GCAGC 2 cut(s) 404, 686
BstV2I GAAGAC 1 cut(s) 617
BstX2I RGATCY 1 cut(s) 523
BstYI RGATCY 1 cut(s) 523
BsuRI GGCC 1 cut(s) 536
BtsCI GGATG 2 cut(s) 370, 475
Cac8I GCNNGC 1 cut(s) 609
Cfr13I GGNCC 3 cut(s) 412, 443, 535
CviAII CATG 6 cut(s) 85, 92, 233, 361, 512, 595
DdeI CTNAG 2 cut(s) 272, 375
DpnI GATC 2 cut(s) 510, 525
DpnII GATC 2 cut(s) 508, 523
DrdI GACNNNNNNGTC 2 cut(s) 419, 450
DseDI GACNNNNNNGTC 2 cut(s) 419, 450
Eam1104I CTCTTC 3 cut(s) 11, 689, 870
EarI CTCTTC 3 cut(s) 11, 689, 870
Eco47I GGWCC 2 cut(s) 412, 443
Eco57I CTGAAG 1 cut(s) 191
EcoO109I RGGNCCY 1 cut(s) 535
EcoT22I ATGCAT 2 cut(s) 93, 600
FaeI CATG 6 cut(s) 88, 95, 236, 364, 515, 598
FatI CATG 6 cut(s) 84, 91, 232, 360, 511, 594
FauNDI CATATG 3 cut(s) 417, 476, 613
FblI GTMKAC 1 cut(s) 126
Fnu4HI GCNGC 2 cut(s) 393, 675
FokI GGATG 2 cut(s) 377, 482
Fsp4HI GCNGC 2 cut(s) 393, 675
FspBI CTAG 4 cut(s) 212, 527, 608, 687
GluI GCNGC 2 cut(s) 393, 675
GsuI CTGGAG 2 cut(s) 390, 785
HaeIII GGCC 1 cut(s) 536
HapII CCGG 2 cut(s) 558, 750
Hin1II CATG 6 cut(s) 88, 95, 236, 364, 515, 598
HindIII AAGCTT 1 cut(s) 329
HinfI GANTC 4 cut(s) 351, 381, 554, 767
HpaII CCGG 2 cut(s) 558, 750
HphI GGTGA 4 cut(s) 16, 25, 181, 527
Hpy166II GTNNAC 3 cut(s) 127, 287, 739
Hpy188I TCNGA 4 cut(s) 38, 162, 630, 896
Hpy188III TCNNGA 5 cut(s) 52, 113, 184, 407, 764
Hpy8I GTNNAC 3 cut(s) 127, 287, 739
Hpy99I CGWCG 1 cut(s) 249
HpyAV CCTTC 1 cut(s) 799
HpyCH4III ACNGT 1 cut(s) 265
HpyCH4IV ACGT 1 cut(s) 247
HpyCH4V TGCA 6 cut(s) 46, 91, 387, 434, 521, 598
HpyF10VI GCNNNNNNNGC 4 cut(s) 401, 527, 604, 729
HpyF3I CTNAG 2 cut(s) 272, 375
HpySE526I ACGT 1 cut(s) 247
Hsp92II CATG 6 cut(s) 88, 95, 236, 364, 515, 598
Kzo9I GATC 2 cut(s) 508, 523
LmnI GCTCC 4 cut(s) 229, 409, 647, 880
Lsp1109I GCAGC 2 cut(s) 404, 686
LweI GCATC 2 cut(s) 78, 508
MaeI CTAG 4 cut(s) 212, 527, 608, 687
MaeII ACGT 1 cut(s) 247
MaeIII GTNAC 2 cut(s) 154, 590
MalI GATC 2 cut(s) 510, 525
MboI GATC 2 cut(s) 508, 523
MboII GAAGA 4 cut(s) 28, 617, 706, 887
MflI RGATCY 1 cut(s) 523
MhlI GDGCHC 2 cut(s) 406, 885
MluCI AATT 4 cut(s) 55, 117, 144, 869
MlyI GAGTC 3 cut(s) 360, 563, 776
MmeI TCCRAC 1 cut(s) 625
MnlI CCTC 5 cut(s) 220, 403, 494, 554, 871
Mph1103I ATGCAT 2 cut(s) 93, 600
MroXI GAANNNNTTC 1 cut(s) 32
MslI CAYNNNNRTG 1 cut(s) 516
MspI CCGG 2 cut(s) 558, 750
MspR9I CCNGG 1 cut(s) 750
MwoI GCNNNNNNNGC 4 cut(s) 401, 527, 604, 729
NciI CCSGG 1 cut(s) 750
NdeI CATATG 3 cut(s) 417, 476, 613
NdeII GATC 2 cut(s) 508, 523
NheI GCTAGC 1 cut(s) 607
NlaIII CATG 6 cut(s) 88, 95, 236, 364, 515, 598
NlaIV GGNNCC 1 cut(s) 778
NmuCI GTSAC 1 cut(s) 590
NsiI ATGCAT 2 cut(s) 93, 600
NspI RCATGY 2 cut(s) 236, 598
NspV TTCGAA 1 cut(s) 322
PdmI GAANNNNTTC 1 cut(s) 32
PfeI GAWTC 1 cut(s) 381
PflMI CCANNNNNTGG 1 cut(s) 361
PkrI GCNGC 2 cut(s) 394, 676
PleI GAGTC 3 cut(s) 359, 562, 775
PpsI GAGTC 3 cut(s) 359, 562, 775
PspN4I GGNNCC 1 cut(s) 778
PspPI GGNCC 3 cut(s) 412, 443, 535
PsuI RGATCY 1 cut(s) 523
RseI CAYNNNNRTG 1 cut(s) 516
SatI GCNGC 2 cut(s) 393, 675
Sau3AI GATC 2 cut(s) 508, 523
Sau96I GGNCC 3 cut(s) 412, 443, 535
SchI GAGTC 3 cut(s) 360, 563, 776
ScrFI CCNGG 1 cut(s) 750
SduI GDGCHC 2 cut(s) 406, 885
SfaNI GCATC 2 cut(s) 78, 508
SfuI TTCGAA 1 cut(s) 322
SinI GGWCC 2 cut(s) 412, 443
SmiMI CAYNNNNRTG 1 cut(s) 516
Sse9I AATT 4 cut(s) 55, 117, 144, 869
SspMI CTAG 4 cut(s) 212, 527, 608, 687
StyD4I CCNGG 1 cut(s) 748
TaaI ACNGT 1 cut(s) 265
TaiI ACGT 1 cut(s) 250
TaqI TCGA 3 cut(s) 244, 322, 784
TaqII GACCGA 1 cut(s) 460
TasI AATT 4 cut(s) 55, 117, 144, 869
TfiI GAWTC 1 cut(s) 381
TseFI GTSAC 1 cut(s) 590
TseI GCWGC 2 cut(s) 392, 674
Tsp45I GTSAC 1 cut(s) 590
TspDTI ATGAA 2 cut(s) 723, 759
TspGWI ACGGA 1 cut(s) 828
Van91I CCANNNNNTGG 1 cut(s) 361
VpaK11BI GGWCC 2 cut(s) 412, 443
XapI RAATTY 2 cut(s) 55, 117
XceI RCATGY 2 cut(s) 236, 598
XcmI CCANNNNNNNNNTGG 1 cut(s) 362
XmiI GTMKAC 1 cut(s) 126
XmnI GAANNNNTTC 1 cut(s) 32
XspI CTAG 4 cut(s) 212, 527, 608, 687
Zsp2I ATGCAT 2 cut(s) 93, 600
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.