FvH4_1g01380

Calcineurin-like phosphoesterase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Reverse (-)
700260 .. 701636
1377 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g01380.t1

Sequence Viewer

Length: 309 bp
ATGGCTGGTGATTTTGGTGAAGAGAACATTGAACTGGTTCGGAGTGTTGCAAATCTTGAATTTTCTAAAGCAGTTATTTTGGGAAACCATGATGCATGGCATACAAAGAAGTTTTCAGGAAAGACAAAAGACGGCGTTCAACTTCAGCTAGAATGTCTTGGCGAGGAACATGTAGCTTATCGACGTTTGGACTATACTACAGTAAAACTGAGCATTGTTGGCGGACAACCTTTTTCTCATGGGGGAAACCAGTTATTTCGGATGAAGCTTCTGTCTGCGAGATATGGAGTCCAAGACATGGATGGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

103

Amino Acids

11.36

Weight (kDa)

6.4

Isoelectric Point (pI)

42.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 298
AciI CCGC 1 cut(s) 222
AcsI RAATTY 1 cut(s) 59
AcuI CTGAAG 1 cut(s) 128
AfiI CCNNNNNNNGG 1 cut(s) 298
AflIII ACRYGT 1 cut(s) 169
AgsI TTSAA 3 cut(s) 32, 59, 140
AluBI AGCT 3 cut(s) 148, 176, 268
AluI AGCT 3 cut(s) 148, 176, 268
ApoI RAATTY 1 cut(s) 59
Asp700I GAANNNNTTC 1 cut(s) 36
AsuHPI GGTGA 2 cut(s) 20, 29
BccI CCATC 1 cut(s) 296
BceAI ACGGC 1 cut(s) 148
BfaI CTAG 1 cut(s) 149
BfmI CTRYAG 1 cut(s) 198
BmsI GCATC 1 cut(s) 82
Bsc4I CCNNNNNNNGG 1 cut(s) 298
Bse1I ACTGG 2 cut(s) 39, 250
BseGI GGATG 2 cut(s) 267, 307
BseLI CCNNNNNNNGG 1 cut(s) 298
BseMII CTCAG 1 cut(s) 200
BseNI ACTGG 2 cut(s) 39, 250
BslI CCNNNNNNNGG 1 cut(s) 298
BspACI CCGC 1 cut(s) 222
BspCNI CTCAG 1 cut(s) 201
BsrI ACTGG 2 cut(s) 39, 250
Bst4CI ACNGT 1 cut(s) 202
Bst6I CTCTTC 1 cut(s) 15
BstDEI CTNAG 1 cut(s) 209
BstF5I GGATG 2 cut(s) 267, 307
BstMWI GCNNNNNNNGC 1 cut(s) 219
BstNSI RCATGY 1 cut(s) 173
BstSFI CTRYAG 1 cut(s) 198
BtsCI GGATG 2 cut(s) 267, 307
CviAII CATG 5 cut(s) 89, 96, 170, 239, 298
CviJI RGCY 4 cut(s) 5, 148, 176, 268
CviKI_1 RGCY 4 cut(s) 5, 148, 176, 268
DdeI CTNAG 1 cut(s) 209
Eam1104I CTCTTC 1 cut(s) 15
EarI CTCTTC 1 cut(s) 15
EciI GGCGGA 1 cut(s) 237
Eco57I CTGAAG 1 cut(s) 128
EcoT22I ATGCAT 1 cut(s) 97
FaeI CATG 5 cut(s) 92, 99, 173, 242, 301
FaiI YATR 8 cut(s) 90, 97, 102, 171, 195, 240, 285, 299
FatI CATG 5 cut(s) 88, 95, 169, 238, 297
FokI GGATG 1 cut(s) 274
FspBI CTAG 1 cut(s) 149
Hin1II CATG 5 cut(s) 92, 99, 173, 242, 301
HindIII AAGCTT 1 cut(s) 266
HinfI GANTC 1 cut(s) 288
HphI GGTGA 2 cut(s) 20, 29
Hpy188I TCNGA 2 cut(s) 42, 261
Hpy188III TCNNGA 2 cut(s) 56, 117
Hpy99I CGWCG 1 cut(s) 186
HpyCH4III ACNGT 1 cut(s) 202
HpyCH4IV ACGT 1 cut(s) 184
HpyCH4V TGCA 2 cut(s) 50, 95
HpyF10VI GCNNNNNNNGC 1 cut(s) 219
HpyF3I CTNAG 1 cut(s) 209
HpySE526I ACGT 1 cut(s) 184
Hsp92II CATG 5 cut(s) 92, 99, 173, 242, 301
LpnPI CCDG 3 cut(s) 20, 102, 263
LweI GCATC 1 cut(s) 82
MaeI CTAG 1 cut(s) 149
MaeII ACGT 1 cut(s) 184
MboII GAAGA 1 cut(s) 32
MluCI AATT 1 cut(s) 59
MlyI GAGTC 1 cut(s) 297
MnlI CCTC 1 cut(s) 157
Mph1103I ATGCAT 1 cut(s) 97
MroXI GAANNNNTTC 1 cut(s) 36
MwoI GCNNNNNNNGC 1 cut(s) 219
NlaIII CATG 5 cut(s) 92, 99, 173, 242, 301
NsiI ATGCAT 1 cut(s) 97
NspI RCATGY 1 cut(s) 173
PciI ACATGT 1 cut(s) 169
PdmI GAANNNNTTC 1 cut(s) 36
PflMI CCANNNNNTGG 1 cut(s) 298
PleI GAGTC 1 cut(s) 296
PpsI GAGTC 1 cut(s) 296
PscI ACATGT 1 cut(s) 169
SchI GAGTC 1 cut(s) 297
SetI ASST 5 cut(s) 150, 178, 187, 232, 270
SfaNI GCATC 1 cut(s) 82
SfcI CTRYAG 1 cut(s) 198
Sse9I AATT 1 cut(s) 59
SsiI CCGC 1 cut(s) 222
SspMI CTAG 1 cut(s) 149
TaaI ACNGT 1 cut(s) 202
TaiI ACGT 1 cut(s) 187
TaqI TCGA 1 cut(s) 181
TasI AATT 1 cut(s) 59
TspDTI ATGAA 1 cut(s) 278
Van91I CCANNNNNTGG 1 cut(s) 298
XapI RAATTY 1 cut(s) 59
XceI RCATGY 1 cut(s) 173
XcmI CCANNNNNNNNNTGG 1 cut(s) 299
XmnI GAANNNNTTC 1 cut(s) 36
XspI CTAG 1 cut(s) 149
Zsp2I ATGCAT 1 cut(s) 97
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.