Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0009945

Physical Location & Seq

Genomic Coordinates Forward (+)

1200276 .. 1204185

Gene Structure 3910 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g02230.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1725 bp

ATGTCGTCGATGACCAAGATCAACGGCCACCCTTCGCCCCACCCCTGCCCTCACCTCGCCTCCTTTAAATCCAAAAACGGCTCCAAACCCTTCCGCGCCTTACAGGACTGCCTCCGAATCAAGCCCCCCGGCGGCCGCGCCTCGATCCGCCGCGATCCCGACGAGCTCCCCCGATGCGCCACCTGCGCCGATCCCTCCCACTCGCGCCTCTACGCCTGCGTCGCCTGCGCCGCGGTCCACTGCCACGCGCCGTCCGGACGCTCCCACGCGGCGGCGCACACCGCGTCGATGCCTCCGGGGCACGAGATCGCCGTCGACGTCGACCGCGCCGAGCTCTTCTGCTGCGCGTGCCGGGACCAGGTCTACGACCGCGACTTCGACGCCGCCGTGGTCCTTGCTCAGACCGCCGCCGCGTCTTCCTCCTCCTCCGGCGCGATCCACGCGCCGGAGAATCTCCGCAAACGGCGTCGGATCGATTACAAGCCGTGGTCGCCGGATTTCAGAGAGCAGGTGATCGTCGGGAGAAACTCGAGCCTCCTCCACGGCCGGAGCCCCTCCGAATTGCCGTGGGGGCTGCGCGGCCTCAACAACCTGGGGAACACATGCTTCATGAACTCGGTTCTTCAGGCGTTGCTCCACACGCCGCCGTTGCGGAACTACTTCCTCAGCGATCGGCACAACCGCTACTTTTGCCAGAAGAAGAGCAATGCCGATAAGAAAAGCGCGGGAAACGGCGGCGGGAACGCCGTGTGCTTGGCCTGTGACATGGACGCCACGTTTTCGGCGGTGTTTTCAGGTGATCGGAAGCCTTATAGCCCCGCCAAGTTCTTGTACAGTTGGTGGCAATACGCCGCGAATTTGGCGAGCTATGAGCAGCAGGATGCGCATGAGTTCTTCATTTCGACGCTGGATGGGATTCATGAGAAGGTCGAAAAGGAGGGGAGGAAAGCCGAGAGCCAAGGCACTGGAGATTGTTGTGTGGCTCATAGAGTTTTCTCTGGCATCTTGCGATCTGATGTCATGTGTATGGCTTGTGGTTTTACGTCAACAACATTTGATCCATGCGTAGACATCTCACTGGATCTGGAACCAGGTTCTGCGAAGAAGGTTTCCACAAAGTCAAATCATTCTTGCAATGGCATTGCAGATTGCATGAATTCTGGCCAGAACTGTGGCACGTCTACCCTTGTCGGATGCCTCGACCGTTTTACAAGACCTGAGAGATTGGGCACTGACCAGAAATTTTTTTGCAAGCAGTGTCAGGTGAGACAGGAGTCTCTAAAGCAAATGTCCATTAGGAAGCTTCCTTTGGTTTCTTGCTTCCATATCAAAAGATTTGAGCATTCTTCAACACGAAAGATGTCAAGGAAGGTTGACCGTTATCTGCAGTTTCCATTTTCTTTGGACATGGCACCATATCTTTCGTCTTCCATATTAAGGAATCGATTTGGGAATAGGATTCTTCCTTTGGATGGGGATGAGCCAGAAGCTCCAAATGAGTTATGTTCAGAATTTGAGTTGTTTGCTGTCGTAACTCACACAGGCAAGCTGGATGCTGGCCACTACGTGACCTACTTGCGATTAAGTAATAACTGGTACAAGTGTGATGATGCTTGGATCACACAAGTTAACGAGGACATTGTGAGGGCTGCACAAGGCTACATGATGTTTTATGTACAGAAAATGCTATTTTACAAAGCGAGTGAAAAACAGGGGTCTGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UCH zf-UBP

Protein Analysis

575

Amino Acids

63.89

Weight (kDa)

8.72

Isoelectric Point (pI)

50.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-UBP	PF02148	59 - 125	1.1e-08	Zn-finger in ubiquitin-hydrolases and other protein
UCH	PF00443	193 - 558	1.9e-59	Ubiquitin carboxyl-terminal hydrolase
UCH_1	PF13423	194 - 537	4.3e-17	Ubiquitin carboxyl-terminal hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009945)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g02230
malus_domestica	MD02G1020200.v1.1 MD15G1163000.v1.1
prunus_persica	Prupe.7G251600_v2.0.a1
pyrus_communis	pycom15g14660
rosa_chinensis	RchiOBHm_Chr2g0087351 RchiOBHm_Chr2g0087361
rosa_laevigata	RLG00000015859
rosa_multiflora	Rmu_co8225392.1_g000001 Rmu_co8488985.1_g000001 Rmu_sc0003367.1_g000026 Rmu_sc0006064.1_g000003 Rmu_sc0033647.1_g000002
rosa_roxburghii	Rroxscaffold_2G00153670
rosa_rugosa	Rorug01G0474400
rosa_samantha	Rh2AG028000 Rh2AG028100 Rh2BG027500 Rh2CG028300 Rh2DG028100
rosa_wichuraiana	Rw2G002220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	191, 499
AatII	GACGTC	1 cut(s)	321
Acc16I	TGCGCA	1 cut(s)	885
Acc36I	ACCTGC	2 cut(s)	191, 499
AccB1I	GGYRCC	1 cut(s)	1411
AccI	GTMKAC	5 cut(s)	315, 321, 363, 1068, 1181
AccIII	TCCGGA	1 cut(s)	254
AclWI	GGATC	8 cut(s)	139, 149, 185, 430, 479, 1052, 1089, 1625
AcoI	YGGCCR	5 cut(s)	25, 133, 544, 1162, 1558
AcsI	RAATTY	4 cut(s)	856, 1156, 1241, 1511
AcuI	CTGAAG	1 cut(s)	608
AcyI	GRCGYC	4 cut(s)	318, 381, 466, 771
AdeI	CACNNNGTG	1 cut(s)	1567
AfaI	GTAC	3 cut(s)	833, 1598, 1677
AfiI	CCNNNNNNNGG	6 cut(s)	131, 271, 358, 445, 1437, 1472
AgsI	TTSAA	1 cut(s)	1350
AjiI	CACGTC	1 cut(s)	1179
AjnI	CCWGG	3 cut(s)	357, 591, 1090
AjuI	GAANNNNNNNTTGG	2 cut(s)	1292, 1324
AluBI	AGCT	6 cut(s)	166, 334, 867, 1303, 1490, 1549
AluI	AGCT	6 cut(s)	166, 334, 867, 1303, 1490, 1549
Alw21I	GWGCWC	2 cut(s)	168, 336
Alw26I	GTCTC	2 cut(s)	1261, 1281
AlwI	GGATC	8 cut(s)	139, 149, 185, 430, 479, 1052, 1089, 1625
AlwNI	CAGNNNCTG	1 cut(s)	1097
Ama87I	CYCGRG	1 cut(s)	529
Aor13HI	TCCGGA	1 cut(s)	254
AoxI	GGCC	7 cut(s)	25, 133, 544, 580, 756, 1162, 1558
ApeKI	GCWGC	4 cut(s)	342, 574, 874, 1649
ApoI	RAATTY	4 cut(s)	856, 1156, 1241, 1511
ArsI	GACNNNNNNTTYG	2 cut(s)	359, 391
Asp700I	GAANNNNTTC	1 cut(s)	659
AspS9I	GGNCC	3 cut(s)	235, 355, 391
AsuC2I	CCSGG	3 cut(s)	129, 297, 353
AsuHPI	GGTGA	4 cut(s)	44, 523, 809, 1276
AvaI	CYCGRG	1 cut(s)	529
AvaII	GGWCC	3 cut(s)	235, 355, 391
BaeGI	GKGCMC	2 cut(s)	303, 1232
BaeI	ACNNNNGTAYC	2 cut(s)	1588, 1621
BalI	TGGCCA	2 cut(s)	1164, 1560
BanI	GGYRCC	1 cut(s)	1411
BanII	GRGCYC	3 cut(s)	168, 336, 554
BauI	CACGAG	1 cut(s)	302
BbsI	GAAGAC	2 cut(s)	408, 1419
Bbv12I	GWGCWC	2 cut(s)	168, 336
BbvCI	CCTCAGC	1 cut(s)	665
BbvI	GCAGC	4 cut(s)	329, 561, 886, 1636
BccI	CCATC	2 cut(s)	905, 1466
BciT130I	CCWGG	3 cut(s)	359, 593, 1092
BcnI	CCSGG	3 cut(s)	129, 297, 353
BcoDI	GTCTC	2 cut(s)	1261, 1281
BfmI	CTRYAG	1 cut(s)	1385
BfuAI	ACCTGC	2 cut(s)	191, 499
BglI	GCCNNNNNGGC	2 cut(s)	298, 571
Bme1390I	CCNGG	6 cut(s)	129, 297, 353, 359, 593, 1092
Bme18I	GGWCC	3 cut(s)	235, 355, 391
BmeT110I	CYCGRG	1 cut(s)	529
BmgBI	CACGTC	1 cut(s)	1179
BmgT120I	GGNCC	3 cut(s)	235, 355, 391
BmiI	GGNNCC	5 cut(s)	82, 356, 551, 1089, 1413
BmrFI	CCNGG	6 cut(s)	129, 297, 353, 359, 593, 1092
BmsI	GCATC	7 cut(s)	164, 279, 871, 1011, 1184, 1543, 1600
BoxI	GACNNNNGTC	1 cut(s)	1273
BpiI	GAAGAC	2 cut(s)	408, 1419
BpmI	CTGGAG	1 cut(s)	987
Bpu10I	CCTNAGC	1 cut(s)	665
BpuMI	CCSGG	3 cut(s)	129, 297, 353
Bsa29I	ATCGAT	2 cut(s)	474, 1444
BsaAI	YACGTR	1 cut(s)	1567
BsaHI	GRCGYC	4 cut(s)	318, 381, 466, 771
BsaJI	CCNNGG	9 cut(s)	127, 231, 296, 387, 485, 541, 566, 592, 958
BsaWI	WCCGGW	1 cut(s)	254
BsaXI	ACNNNNNCTCC	2 cut(s)	44, 74
Bsc4I	CCNNNNNNNGG	6 cut(s)	131, 271, 358, 445, 1437, 1472
Bse1I	ACTGG	3 cut(s)	970, 1083, 1598
Bse3DI	GCAATG	3 cut(s)	712, 1140, 1141
BseAI	TCCGGA	1 cut(s)	254
BseBI	CCWGG	3 cut(s)	359, 593, 1092
BseCI	ATCGAT	2 cut(s)	474, 1444
BseDI	CCNNGG	9 cut(s)	127, 231, 296, 387, 485, 541, 566, 592, 958
BseGI	GGATG	6 cut(s)	886, 916, 1199, 1477, 1483, 1558
BseLI	CCNNNNNNNGG	6 cut(s)	131, 271, 358, 445, 1437, 1472
BseMI	GCAATG	3 cut(s)	712, 1140, 1141
BseMII	CTCAG	3 cut(s)	413, 679, 1209
BseNI	ACTGG	3 cut(s)	970, 1083, 1598
BseRI	GAGGAG	3 cut(s)	412, 415, 527
BseSI	GKGCMC	2 cut(s)	303, 1232
BseX3I	CGGCCG	2 cut(s)	133, 544
BseXI	GCAGC	4 cut(s)	329, 561, 886, 1636
BsgI	GTGCAG	1 cut(s)	1635
Bsh1285I	CGRYCG	6 cut(s)	136, 325, 370, 547, 673, 1204
BshFI	GGCC	7 cut(s)	27, 135, 546, 582, 758, 1164, 1560
BshNI	GGYRCC	1 cut(s)	1411
BshVI	ATCGAT	2 cut(s)	474, 1444
BsiEI	CGRYCG	6 cut(s)	136, 325, 370, 547, 673, 1204
BsiHKAI	GWGCWC	2 cut(s)	168, 336
BsiHKCI	CYCGRG	1 cut(s)	529
BsiSI	CCGG	8 cut(s)	129, 255, 296, 352, 429, 446, 494, 547
BslFI	GGGAC	1 cut(s)	368
BslI	CCNNNNNNNGG	6 cut(s)	131, 271, 358, 445, 1437, 1472
BsmAI	GTCTC	2 cut(s)	1261, 1281
BsmFI	GGGAC	1 cut(s)	368
BsmI	GAATGC	1 cut(s)	1342
BsnI	GGCC	7 cut(s)	27, 135, 546, 582, 758, 1164, 1560
BsoBI	CYCGRG	1 cut(s)	529
Bsp1286I	GDGCHC	5 cut(s)	168, 303, 336, 554, 1232
Bsp13I	TCCGGA	1 cut(s)	254
Bsp1407I	TGTACA	2 cut(s)	831, 1675
BspANI	GGCC	7 cut(s)	27, 135, 546, 582, 758, 1164, 1560
BspCNI	CTCAG	3 cut(s)	412, 678, 1210
BspDI	ATCGAT	2 cut(s)	474, 1444
BspEI	TCCGGA	1 cut(s)	254
BspHI	TCATGA	2 cut(s)	609, 919
BspLI	GGNNCC	5 cut(s)	82, 356, 551, 1089, 1413
BspMAI	CTGCAG	1 cut(s)	1389
BspMI	ACCTGC	2 cut(s)	191, 499
BspPI	GGATC	8 cut(s)	139, 149, 185, 430, 479, 1052, 1089, 1625
BspQI	GCTCTTC	2 cut(s)	341, 695
BspT107I	GGYRCC	1 cut(s)	1411
BsrDI	GCAATG	3 cut(s)	712, 1140, 1141
BsrGI	TGTACA	2 cut(s)	831, 1675
BsrI	ACTGG	3 cut(s)	970, 1083, 1598
BssECI	CCNNGG	9 cut(s)	127, 231, 296, 387, 485, 541, 566, 592, 958
BssNI	GRCGYC	4 cut(s)	318, 381, 466, 771
BssSI	CACGAG	1 cut(s)	302
BssT1I	CCWWGG	1 cut(s)	958
Bst2BI	CACGAG	1 cut(s)	302
Bst2UI	CCWGG	3 cut(s)	359, 593, 1092
Bst4CI	ACNGT	4 cut(s)	836, 1172, 1205, 1379
Bst6I	CTCTTC	2 cut(s)	341, 695
BstACI	GRCGYC	4 cut(s)	318, 381, 466, 771
BstAUI	TGTACA	2 cut(s)	831, 1675
BstBAI	YACGTR	1 cut(s)	1567
BstC8I	GCNNGC	7 cut(s)	217, 226, 349, 865, 1253, 1547, 1558
BstDEI	CTNAG	3 cut(s)	399, 665, 1218
BstDSI	CCRYGG	5 cut(s)	231, 387, 485, 541, 566
BstF5I	GGATG	6 cut(s)	886, 916, 1199, 1477, 1483, 1558
BstMAI	GTCTC	2 cut(s)	1261, 1281
BstMCI	CGRYCG	6 cut(s)	136, 325, 370, 547, 673, 1204
BstNI	CCWGG	3 cut(s)	359, 593, 1092
BstNSI	RCATGY	1 cut(s)	606
BstPAI	GACNNNNGTC	1 cut(s)	1273
BstSCI	CCNGG	6 cut(s)	127, 295, 351, 357, 591, 1090
BstSFI	CTRYAG	1 cut(s)	1385
BstSLI	GKGCMC	2 cut(s)	303, 1232
BstV1I	GCAGC	4 cut(s)	329, 561, 886, 1636
BstV2I	GAAGAC	2 cut(s)	408, 1419
BstX2I	RGATCY	1 cut(s)	1081
BstXI	CCANNNNNNTGG	2 cut(s)	965, 1172
BstYI	RGATCY	1 cut(s)	1081
BstZI	CGGCCG	2 cut(s)	133, 544
Bsu15I	ATCGAT	2 cut(s)	474, 1444
BsuRI	GGCC	7 cut(s)	27, 135, 546, 582, 758, 1164, 1560
BsuTUI	ATCGAT	2 cut(s)	474, 1444
BtgI	CCRYGG	5 cut(s)	231, 387, 485, 541, 566
BtrI	CACGTC	1 cut(s)	1179
BtsCI	GGATG	6 cut(s)	886, 916, 1199, 1477, 1483, 1558
BtsI	GCAGTG	2 cut(s)	238, 1262
BtsIMutI	CAGTG	5 cut(s)	238, 963, 1076, 1230, 1262
BveI	ACCTGC	2 cut(s)	191, 499
Cac8I	GCNNGC	7 cut(s)	217, 226, 349, 865, 1253, 1547, 1558
CaiI	CAGNNNCTG	1 cut(s)	1097
CciI	TCATGA	2 cut(s)	609, 919
CciNI	GCGGCCGC	1 cut(s)	133
Cfr13I	GGNCC	3 cut(s)	235, 355, 391
Cfr42I	CCGCGG	1 cut(s)	234
ClaI	ATCGAT	2 cut(s)	474, 1444
CseI	GACGC	8 cut(s)	208, 267, 273, 389, 402, 455, 779, 913
CsiI	ACCWGGT	2 cut(s)	357, 1090
Csp6I	GTAC	3 cut(s)	832, 1597, 1676
CviQI	GTAC	3 cut(s)	832, 1597, 1676
DdeI	CTNAG	3 cut(s)	399, 665, 1218
DraI	TTTAAA	1 cut(s)	67
DraIII	CACNNNGTG	1 cut(s)	1567
EaeI	YGGCCR	5 cut(s)	25, 133, 544, 1162, 1558
EagI	CGGCCG	2 cut(s)	133, 544
Eam1104I	CTCTTC	2 cut(s)	341, 695
EarI	CTCTTC	2 cut(s)	341, 695
EciI	GGCGGA	1 cut(s)	137
Ecl136II	GAGCTC	2 cut(s)	166, 334
EclXI	CGGCCG	2 cut(s)	133, 544
Eco130I	CCWWGG	1 cut(s)	958
Eco24I	GRGCYC	3 cut(s)	168, 336, 554
Eco47I	GGWCC	3 cut(s)	235, 355, 391
Eco52I	CGGCCG	2 cut(s)	133, 544
Eco53kI	GAGCTC	2 cut(s)	166, 334
Eco57I	CTGAAG	1 cut(s)	608
Eco88I	CYCGRG	1 cut(s)	529
EcoICRI	GAGCTC	2 cut(s)	166, 334
EcoRI	GAATTC	1 cut(s)	1156
EcoRII	CCWGG	3 cut(s)	357, 591, 1090
EcoT14I	CCWWGG	1 cut(s)	958
EcoT38I	GRGCYC	3 cut(s)	168, 336, 554
ErhI	CCWWGG	1 cut(s)	958
FaqI	GGGAC	1 cut(s)	368
FauI	CCCGC	3 cut(s)	718, 731, 826
FblI	GTMKAC	5 cut(s)	315, 321, 363, 1068, 1181
FokI	GGATG	6 cut(s)	893, 923, 1206, 1484, 1490, 1565
FriOI	GRGCYC	3 cut(s)	168, 336, 554
FspAI	RTGCGCAY	1 cut(s)	885
FspI	TGCGCA	1 cut(s)	885
GsuI	CTGGAG	1 cut(s)	987
HaeIII	GGCC	7 cut(s)	27, 135, 546, 582, 758, 1164, 1560
HapII	CCGG	8 cut(s)	129, 255, 296, 352, 429, 446, 494, 547
HgaI	GACGC	8 cut(s)	208, 267, 273, 389, 402, 455, 779, 913
Hin1I	GRCGYC	4 cut(s)	318, 381, 466, 771
HincII	GTYRAC	5 cut(s)	316, 322, 1047, 1375, 1630
HindII	GTYRAC	5 cut(s)	316, 322, 1047, 1375, 1630
HindIII	AAGCTT	1 cut(s)	1301
HinfI	GANTC	6 cut(s)	117, 451, 916, 1274, 1441, 1459
HpaI	GTTAAC	1 cut(s)	1630
HpaII	CCGG	8 cut(s)	129, 255, 296, 352, 429, 446, 494, 547
HphI	GGTGA	4 cut(s)	44, 523, 809, 1276
Hpy166II	GTNNAC	9 cut(s)	238, 316, 322, 364, 1047, 1069, 1182, 1375, 1630
Hpy188I	TCNGA	9 cut(s)	116, 402, 471, 503, 559, 804, 1015, 1193, 1510
Hpy188III	TCNNGA	6 cut(s)	158, 255, 520, 610, 920, 1085
Hpy8I	GTNNAC	9 cut(s)	238, 316, 322, 364, 1047, 1069, 1182, 1375, 1630
HpyAV	CCTTC	5 cut(s)	42, 100, 919, 1099, 1363
HpyCH4III	ACNGT	4 cut(s)	836, 1172, 1205, 1379
HpyCH4IV	ACGT	5 cut(s)	318, 776, 1043, 1178, 1566
HpyCH4V	TGCA	7 cut(s)	1134, 1145, 1152, 1251, 1387, 1652, 1721
HpyF3I	CTNAG	3 cut(s)	399, 665, 1218
HpySE526I	ACGT	5 cut(s)	318, 776, 1043, 1178, 1566
Hsp92I	GRCGYC	4 cut(s)	318, 381, 466, 771
Kpn2I	TCCGGA	1 cut(s)	254
KspAI	GTTAAC	1 cut(s)	1630
KspI	CCGCGG	1 cut(s)	234
LguI	GCTCTTC	2 cut(s)	341, 695
LmnI	GCTCC	6 cut(s)	86, 171, 266, 549, 639, 1495
Lsp1109I	GCAGC	4 cut(s)	329, 561, 886, 1636
LweI	GCATC	7 cut(s)	164, 279, 871, 1011, 1184, 1543, 1600
MabI	ACCWGGT	2 cut(s)	357, 1090
MaeII	ACGT	5 cut(s)	318, 776, 1043, 1178, 1566
MaeIII	GTNAC	3 cut(s)	761, 1531, 1567
MflI	RGATCY	1 cut(s)	1081
MhlI	GDGCHC	5 cut(s)	168, 303, 336, 554, 1232
MlsI	TGGCCA	2 cut(s)	1164, 1560
MluCI	AATT	5 cut(s)	560, 856, 1156, 1241, 1511
MluNI	TGGCCA	2 cut(s)	1164, 1560
MlyI	GAGTC	1 cut(s)	1283
MmeI	TCCRAC	2 cut(s)	449, 1171
Mox20I	TGGCCA	2 cut(s)	1164, 1560
MroI	TCCGGA	1 cut(s)	254
MroXI	GAANNNNTTC	1 cut(s)	659
MscI	TGGCCA	2 cut(s)	1164, 1560
MseI	TTAA	4 cut(s)	66, 1436, 1583, 1629
MslI	CAYNNNNRTG	1 cut(s)	1025
Msp20I	TGGCCA	2 cut(s)	1164, 1560
MspA1I	CMGCKG	1 cut(s)	233
MspI	CCGG	8 cut(s)	129, 255, 296, 352, 429, 446, 494, 547
MspR9I	CCNGG	6 cut(s)	129, 297, 353, 359, 593, 1092
Mva1269I	GAATGC	1 cut(s)	1342
MvaI	CCWGG	3 cut(s)	359, 593, 1092
NciI	CCSGG	3 cut(s)	129, 297, 353
NlaIV	GGNNCC	5 cut(s)	82, 356, 551, 1089, 1413
NmeAIII	GCCGAG	2 cut(s)	355, 976
NmuCI	GTSAC	2 cut(s)	761, 1567
NotI	GCGGCCGC	1 cut(s)	133
NsbI	TGCGCA	1 cut(s)	885
NspI	RCATGY	1 cut(s)	606
PaeR7I	CTCGAG	1 cut(s)	529
PagI	TCATGA	2 cut(s)	609, 919
PaqCI	CACCTGC	2 cut(s)	191, 499
PciSI	GCTCTTC	2 cut(s)	341, 695
PcsI	WCGNNNNNNNCGW	5 cut(s)	309, 315, 327, 384, 1197
PctI	GAATGC	1 cut(s)	1342
PdmI	GAANNNNTTC	1 cut(s)	659
PfeI	GAWTC	5 cut(s)	117, 451, 916, 1441, 1459
PflFI	GACNNNGTC	1 cut(s)	359
Ple19I	CGATCG	1 cut(s)	673
PleI	GAGTC	1 cut(s)	1282
PpsI	GAGTC	1 cut(s)	1282
Ppu21I	YACGTR	1 cut(s)	1567
PshAI	GACNNNNGTC	1 cut(s)	1273
Psp124BI	GAGCTC	2 cut(s)	168, 336
Psp6I	CCWGG	3 cut(s)	357, 591, 1090
PspGI	CCWGG	3 cut(s)	357, 591, 1090
PspN4I	GGNNCC	5 cut(s)	82, 356, 551, 1089, 1413
PspPI	GGNCC	3 cut(s)	235, 355, 391
PspXI	VCTCGAGB	1 cut(s)	529
PstI	CTGCAG	1 cut(s)	1389
PstNI	CAGNNNCTG	1 cut(s)	1097
PsuI	RGATCY	1 cut(s)	1081
PsyI	GACNNNGTC	1 cut(s)	359
PvuI	CGATCG	1 cut(s)	673
RsaI	GTAC	3 cut(s)	833, 1598, 1677
RsaNI	GTAC	3 cut(s)	832, 1597, 1676
RseI	CAYNNNNRTG	1 cut(s)	1025
SacI	GAGCTC	2 cut(s)	168, 336
SacII	CCGCGG	1 cut(s)	234
SalI	GTCGAC	2 cut(s)	314, 320
SapI	GCTCTTC	2 cut(s)	341, 695
SaqAI	TTAA	4 cut(s)	66, 1436, 1583, 1629
Sau96I	GGNCC	3 cut(s)	235, 355, 391
SchI	GAGTC	1 cut(s)	1283
ScrFI	CCNGG	6 cut(s)	129, 297, 353, 359, 593, 1092
SduI	GDGCHC	5 cut(s)	168, 303, 336, 554, 1232
SexAI	ACCWGGT	2 cut(s)	357, 1090
SfaNI	GCATC	7 cut(s)	164, 279, 871, 1011, 1184, 1543, 1600
SfcI	CTRYAG	1 cut(s)	1385
Sfr274I	CTCGAG	1 cut(s)	529
Sfr303I	CCGCGG	1 cut(s)	234
SgrBI	CCGCGG	1 cut(s)	234
SgrDI	CGTCGACG	1 cut(s)	314
SinI	GGWCC	3 cut(s)	235, 355, 391
SlaI	CTCGAG	1 cut(s)	529
SmiMI	CAYNNNNRTG	1 cut(s)	1025
SmlI	CTYRAG	1 cut(s)	529
SmoI	CTYRAG	1 cut(s)	529
Sse9I	AATT	5 cut(s)	560, 856, 1156, 1241, 1511
SstI	GAGCTC	2 cut(s)	168, 336
StyD4I	CCNGG	6 cut(s)	127, 295, 351, 357, 591, 1090
StyI	CCWWGG	1 cut(s)	958
TaaI	ACNGT	4 cut(s)	836, 1172, 1205, 1379
TaiI	ACGT	5 cut(s)	321, 779, 1046, 1181, 1569
TasI	AATT	5 cut(s)	560, 856, 1156, 1241, 1511
TatI	WGTACW	2 cut(s)	831, 1675
TfiI	GAWTC	5 cut(s)	117, 451, 916, 1441, 1459
Tru1I	TTAA	4 cut(s)	66, 1436, 1583, 1629
Tru9I	TTAA	4 cut(s)	66, 1436, 1583, 1629
TscAI	CASTG	5 cut(s)	245, 970, 1083, 1237, 1262
TseFI	GTSAC	2 cut(s)	761, 1567
TseI	GCWGC	4 cut(s)	342, 574, 874, 1649
Tsp45I	GTSAC	2 cut(s)	761, 1567
TspDTI	ATGAA	5 cut(s)	598, 626, 886, 908, 1169
TspRI	CASTG	5 cut(s)	245, 970, 1083, 1237, 1262
Tth111I	GACNNNGTC	1 cut(s)	359
VpaK11BI	GGWCC	3 cut(s)	235, 355, 391
XapI	RAATTY	4 cut(s)	856, 1156, 1241, 1511
XceI	RCATGY	1 cut(s)	606
XhoI	CTCGAG	1 cut(s)	529
XmiI	GTMKAC	5 cut(s)	315, 321, 363, 1068, 1181
XmnI	GAANNNNTTC	1 cut(s)	659
ZraI	GACGTC	1 cut(s)	319

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.