FvH4_1g03350

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0014629
Physical Location & Seq
Forward (+)
1853377 .. 1855122
1746 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g03350.t1

Sequence Viewer

Length: 1578 bp
ATGATTCAAAAAGCCGTTATAACCACTGATCTCATTCTCCTCTGCCAAAAATGCAAAACCCTAAACCAACTCAAGCAAATCCACGCCTACCTCCTCACCTCCACCCGACCCGAATCCCCCTACGCCGTTGCGCCGCTCCTCTCCGCCGCCGCAAAACACGCTCCCTGGTTCCCCTACGCTTGCTCCATCTTCAACCACCACCACCGCAACACTTTCATGTACAACACCATGATCAGAGCCCACGCGCATTACCACGCGCCGCTGGCCGCGATTACGTGTTACATAGACTTGTTGTATTGTGGGATTGTTGCTAATAATTTTACATTCCCGCCGTTGATCAAAGCTTGCGTGATGTTGATGGAACATGATTCCGGGCTAACGGGTCGGTTGGTTCATGCCCATGTTGTTAAACTCGGGTTCGGAGACGACCCGTTTGTCGTTTCGGGGCTGATCGAGTTTTACTCGGCGAGTGTTGAGATTGGTTCTGCGAGATTGGTGTTTGATAAAAGTCATGAGAAAGATGTGGTGGTGTGGACGGCGATGGTGGATGGGTATGGGAAGATTGGGGATGTGGAGAATGCACGGAAGGTGTTCGATGAAATGCCCGAGAGAAATGCTGTGTCGTGGAGCGCGATGATGGCTGCGTATTCTCGAGTGAGTGGATTTAGAGAGGTGATTTGTTTGTTTAGGCAGATGCAGGAAGCGGGGACGAGGCCGAATGAGGCTGTTCTCGTTAGTGTTCTCACTGCCGCGGCTCATTTGGGCGCGGTGGCGCAAGGGTTGTGGGTGCACTCGTATGCTAAGAGGCGCAGGCTTGAGTCGAATGTGATATTGGCCACTGCGTTGGTTGATATGTACTCGAAATGTGGGTATGTGGAAGCAGCTATGGAGGTTTTTGAGGGCATGGCGGATAAGGATGCGAGAGCGTGGAATGCTATGATTAACGGGGTTGCAATGAATGGGGATGCAAGGAAATCGATTGAGCTGTTTGATAAAATGGTTGGAGATAAGATTCAACCGACAGAGACTACATTTGTTGCTGTTCTCTCGGCTTGCAGGCATGCGAAAATGGTAGACAAGGGACTTGAATTGTTTGATCAAATGAGTACCCTTTATGGGGTTAAGCCCGGGCTTCAGCACTATGCTTGTGTTGTGGACCTTTTGGCCAGAGCTGGCATGGTAGAGGAAGCTGAGAAGTTTATAGAGGACAAGATGGGAGGACTAGGAAGAGGGGATGCCAACGTGTGGGGGGCGTTACTAGGTGCGTGTAGAGTTCATGGGAATGTTGAAGTTGGGGACAGAATTTGGCAAAAGCTCGCTGATATGGGAGTAGCCGATTGCGGTATTCATGTTCTTTCATATATTATGTACAAGGAAGCTGGCTTGGAATTCGAGGCAAAGAGAGTCCGAGATATGATCTCAGAAAGTGGAATGAAGAAGAAACCTGGTTCCAGTGTGATAGAGGTAAATGGAGTGGCTGAAGAGTTCATTGTTGGTGATCTTTGTCCTCCACAAGCACAAGAAATGCTTGAGATGCTAAACTCCTTCTGTAAAATGGCGAATTTGGAGGACGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

526

Amino Acids

57.93

Weight (kDa)

6.15

Isoelectric Point (pI)

38.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_1 PF12854 172 - 201 2.4e-06 PPR repeat
PPR_2 PF13041 173 - 205 9.3e-07 PPR repeat family
PPR PF01535 176 - 205 1.8e-07 PPR repeat
PPR_long PF17177 283 - 407 3.7e-07 Pentacotripeptide-repeat region of PRORP
PPR_2 PF13041 306 - 352 8e-08 PPR repeat family
E_motif PF20431 426 - 488 1.5e-06 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014629)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03350
malus_domestica MD02G1033000.v1.1
prunus_persica Prupe.7G242300_v2.0.a1
pyrus_communis pycom02g01480 pycom02g02710 pycom04g20500
rosa_chinensis RchiOBHm_Chr2g0088571
rosa_laevigata RLG00000015966
rosa_multiflora Rmu_co8371145.1_g000001 Rmu_sc0004733.1_g000003
rosa_roxburghii Rroxscaffold_2G00152540
rosa_rugosa Rorug01G0485200
rosa_samantha Rh2AG040500 Rh2BG039200 Rh2CG040100 Rh2DG039500
rosa_wichuraiana Rw2G003140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 20
AasI GACNNNNNNGTC 1 cut(s) 434
AccB7I CCANNNNNTGG 1 cut(s) 1245
AccBSI CCGCTC 1 cut(s) 136
AccI GTMKAC 1 cut(s) 1074
AccII CGCG 6 cut(s) 245, 257, 269, 632, 752, 767
AcoI YGGCCR 3 cut(s) 264, 834, 1164
AcsI RAATTY 3 cut(s) 1302, 1388, 1561
AcuI CTGAAG 2 cut(s) 1118, 1500
AfaI GTAC 4 cut(s) 221, 857, 1108, 1370
AfiI CCNNNNNNNGG 3 cut(s) 1116, 1117, 1245
AflIII ACRYGT 3 cut(s) 275, 1242, 1572
AgsI TTSAA 5 cut(s) 8, 193, 1016, 1088, 1289
AjiI CACGTC 1 cut(s) 1573
AjnI CCWGG 2 cut(s) 164, 1444
AjuI GAANNNNNNNTTGG 2 cut(s) 815, 847
AluBI AGCT 7 cut(s) 344, 884, 985, 1172, 1190, 1315, 1379
AluI AGCT 7 cut(s) 344, 884, 985, 1172, 1190, 1315, 1379
Alw21I GWGCWC 1 cut(s) 792
Alw26I GTCTC 2 cut(s) 417, 1019
Alw44I GTGCAC 1 cut(s) 788
Ama87I CYCGRG 4 cut(s) 413, 605, 651, 1127
AoxI GGCC 4 cut(s) 264, 713, 834, 1164
ApaLI GTGCAC 1 cut(s) 788
ApeKI GCWGC 2 cut(s) 641, 881
ApoI RAATTY 3 cut(s) 1302, 1388, 1561
ArsI GACNNNNNNTTYG 2 cut(s) 416, 448
Asp700I GAANNNNTTC 1 cut(s) 590
AspLEI GCGC 7 cut(s) 133, 247, 259, 632, 767, 775, 810
AspS9I GGNCC 1 cut(s) 1156
AsuC2I CCSGG 3 cut(s) 373, 1128, 1129
AsuHPI GGTGA 3 cut(s) 88, 685, 1508
AvaI CYCGRG 4 cut(s) 413, 605, 651, 1127
AvaII GGWCC 1 cut(s) 1156
BaeGI GKGCMC 1 cut(s) 792
BalI TGGCCA 2 cut(s) 836, 1166
BanII GRGCYC 1 cut(s) 241
Bbv12I GWGCWC 1 cut(s) 792
BbvI GCAGC 2 cut(s) 628, 893
BccI CCATC 6 cut(s) 194, 352, 535, 542, 631, 1207
BceAI ACGGC 3 cut(s) 110, 316, 552
BcgI CGANNNNNNTGC 4 cut(s) 596, 630, 957, 991
BciT130I CCWGG 2 cut(s) 166, 1446
BclI TGATCA 3 cut(s) 231, 336, 1096
BcnI CCSGG 3 cut(s) 373, 1128, 1129
BcoDI GTCTC 2 cut(s) 417, 1019
BfaI CTAG 2 cut(s) 1223, 1259
BisI GCNGC 9 cut(s) 134, 147, 150, 260, 267, 642, 750, 753, 882
BlsI GCNGC 9 cut(s) 135, 148, 151, 261, 268, 643, 751, 754, 883
Bme1390I CCNGG 5 cut(s) 166, 373, 1128, 1129, 1446
Bme18I GGWCC 1 cut(s) 1156
BmeT110I CYCGRG 4 cut(s) 413, 605, 651, 1127
BmgBI CACGTC 1 cut(s) 1573
BmgT120I GGNCC 1 cut(s) 1156
BmiI GGNNCC 2 cut(s) 170, 1450
BmrFI CCNGG 5 cut(s) 166, 373, 1128, 1129, 1446
BmsI GCATC 5 cut(s) 684, 907, 955, 1225, 1524
BplI GAGNNNNNCTC 2 cut(s) 446, 478
BpuEI CTTGAG 3 cut(s) 56, 836, 1550
BpuMI CCSGG 3 cut(s) 373, 1128, 1129
Bsa29I ATCGAT 1 cut(s) 977
BsaAI YACGTR 1 cut(s) 276
BsaJI CCNNGG 3 cut(s) 164, 750, 1127
BsaXI ACNNNNNCTCC 3 cut(s) 167, 197, 1559
Bsc4I CCNNNNNNNGG 3 cut(s) 1116, 1117, 1245
Bse1I ACTGG 1 cut(s) 1452
Bse3DI GCAATG 1 cut(s) 960
BseBI CCWGG 2 cut(s) 166, 1446
BseCI ATCGAT 1 cut(s) 977
BseDI CCNNGG 3 cut(s) 164, 750, 1127
BseGI GGATG 5 cut(s) 553, 574, 922, 970, 1240
BseLI CCNNNNNNNGG 3 cut(s) 1116, 1117, 1245
BseMI GCAATG 1 cut(s) 960
BseMII CTCAG 2 cut(s) 1182, 1434
BseNI ACTGG 1 cut(s) 1452
BseRI GAGGAG 3 cut(s) 29, 83, 128
BseSI GKGCMC 1 cut(s) 792
BseXI GCAGC 2 cut(s) 628, 893
Bsh1236I CGCG 6 cut(s) 245, 257, 269, 632, 752, 767
BshFI GGCC 4 cut(s) 266, 715, 836, 1166
BshVI ATCGAT 1 cut(s) 977
BsiHKAI GWGCWC 1 cut(s) 792
BsiHKCI CYCGRG 4 cut(s) 413, 605, 651, 1127
BsiSI CCGG 2 cut(s) 372, 1128
BslFI GGGAC 3 cut(s) 721, 1095, 1310
BslI CCNNNNNNNGG 3 cut(s) 1116, 1117, 1245
BsmAI GTCTC 2 cut(s) 417, 1019
BsmBI CGTCTC 1 cut(s) 417
BsmFI GGGAC 3 cut(s) 721, 1095, 1310
BsmI GAATGC 2 cut(s) 583, 937
BsnI GGCC 4 cut(s) 266, 715, 836, 1166
BsoBI CYCGRG 4 cut(s) 413, 605, 651, 1127
Bsp1286I GDGCHC 2 cut(s) 241, 792
Bsp1407I TGTACA 2 cut(s) 219, 1368
Bsp143I GATC 7 cut(s) 28, 231, 336, 450, 1096, 1416, 1498
BspANI GGCC 4 cut(s) 266, 715, 836, 1166
BspCNI CTCAG 2 cut(s) 1183, 1433
BspDI ATCGAT 1 cut(s) 977
BspFNI CGCG 6 cut(s) 245, 257, 269, 632, 752, 767
BspHI TCATGA 1 cut(s) 511
BspLI GGNNCC 2 cut(s) 170, 1450
BsrBI CCGCTC 1 cut(s) 136
BsrDI GCAATG 1 cut(s) 960
BsrGI TGTACA 2 cut(s) 219, 1368
BsrI ACTGG 1 cut(s) 1452
BssECI CCNNGG 3 cut(s) 164, 750, 1127
BssMI GATC 7 cut(s) 28, 231, 336, 450, 1096, 1416, 1498
Bst2UI CCWGG 2 cut(s) 166, 1446
Bst6I CTCTTC 2 cut(s) 1222, 1476
BstAUI TGTACA 2 cut(s) 219, 1368
BstBAI YACGTR 1 cut(s) 276
BstDEI CTNAG 3 cut(s) 801, 1191, 1420
BstDSI CCRYGG 1 cut(s) 750
BstF5I GGATG 5 cut(s) 553, 574, 922, 970, 1240
BstFNI CGCG 6 cut(s) 245, 257, 269, 632, 752, 767
BstHHI GCGC 7 cut(s) 133, 247, 259, 632, 767, 775, 810
BstKTI GATC 7 cut(s) 31, 234, 339, 453, 1099, 1419, 1501
BstMAI GTCTC 2 cut(s) 417, 1019
BstMBI GATC 7 cut(s) 28, 231, 336, 450, 1096, 1416, 1498
BstMWI GCNNNNNNNGC 6 cut(s) 51, 158, 263, 638, 932, 1534
BstNI CCWGG 2 cut(s) 166, 1446
BstNSI RCATGY 1 cut(s) 1064
BstSCI CCNGG 5 cut(s) 164, 371, 1126, 1127, 1444
BstSLI GKGCMC 1 cut(s) 792
BstUI CGCG 6 cut(s) 245, 257, 269, 632, 752, 767
BstV1I GCAGC 2 cut(s) 628, 893
BstXI CCANNNNNNTGG 1 cut(s) 844
Bsu15I ATCGAT 1 cut(s) 977
BsuRI GGCC 4 cut(s) 266, 715, 836, 1166
BsuTUI ATCGAT 1 cut(s) 977
BtgI CCRYGG 1 cut(s) 750
BtgZI GCGATG 2 cut(s) 554, 647
BtrI CACGTC 1 cut(s) 1573
BtsCI GGATG 5 cut(s) 553, 574, 922, 970, 1240
BtsI GCAGTG 2 cut(s) 744, 837
BtsIMutI CAGTG 4 cut(s) 24, 744, 837, 1459
CciI TCATGA 1 cut(s) 511
CfoI GCGC 7 cut(s) 133, 247, 259, 632, 767, 775, 810
Cfr13I GGNCC 1 cut(s) 1156
Cfr42I CCGCGG 1 cut(s) 753
Cfr9I CCCGGG 1 cut(s) 1127
ClaI ATCGAT 1 cut(s) 977
CsiI ACCWGGT 1 cut(s) 1444
Csp6I GTAC 4 cut(s) 220, 856, 1107, 1369
CspCI CAANNNNNGTGG 2 cut(s) 764, 799
CviQI GTAC 4 cut(s) 220, 856, 1107, 1369
DdeI CTNAG 3 cut(s) 801, 1191, 1420
DpnI GATC 7 cut(s) 30, 233, 338, 452, 1098, 1418, 1500
DpnII GATC 7 cut(s) 28, 231, 336, 450, 1096, 1416, 1498
DrdI GACNNNNNNGTC 1 cut(s) 434
DseDI GACNNNNNNGTC 1 cut(s) 434
EaeI YGGCCR 3 cut(s) 264, 834, 1164
Eam1104I CTCTTC 2 cut(s) 1222, 1476
EarI CTCTTC 2 cut(s) 1222, 1476
EciI GGCGGA 2 cut(s) 133, 923
Eco24I GRGCYC 1 cut(s) 241
Eco47I GGWCC 1 cut(s) 1156
Eco57I CTGAAG 2 cut(s) 1118, 1500
Eco88I CYCGRG 4 cut(s) 413, 605, 651, 1127
EcoRI GAATTC 1 cut(s) 1388
EcoRII CCWGG 2 cut(s) 164, 1444
EcoT38I GRGCYC 1 cut(s) 241
Esp3I CGTCTC 1 cut(s) 417
FalI AAGNNNNNCTT 2 cut(s) 1512, 1544
FaqI GGGAC 3 cut(s) 721, 1095, 1310
FauI CCCGC 2 cut(s) 336, 697
FbaI TGATCA 3 cut(s) 231, 336, 1096
FblI GTMKAC 1 cut(s) 1074
Fnu4HI GCNGC 9 cut(s) 134, 147, 150, 260, 267, 642, 750, 753, 882
FokI GGATG 5 cut(s) 560, 581, 929, 977, 1247
FriOI GRGCYC 1 cut(s) 241
Fsp4HI GCNGC 9 cut(s) 134, 147, 150, 260, 267, 642, 750, 753, 882
FspBI CTAG 2 cut(s) 1223, 1259
GlaI GCGC 7 cut(s) 132, 246, 258, 631, 766, 774, 809
GluI GCNGC 9 cut(s) 134, 147, 150, 260, 267, 642, 750, 753, 882
HaeIII GGCC 4 cut(s) 266, 715, 836, 1166
HapII CCGG 2 cut(s) 372, 1128
HhaI GCGC 7 cut(s) 133, 247, 259, 632, 767, 775, 810
Hin6I GCGC 7 cut(s) 131, 245, 257, 630, 765, 773, 808
HinP1I GCGC 7 cut(s) 131, 245, 257, 630, 765, 773, 808
HindIII AAGCTT 1 cut(s) 342
HinfI GANTC 6 cut(s) 4, 113, 368, 818, 1012, 1404
HpaII CCGG 2 cut(s) 372, 1128
HphI GGTGA 3 cut(s) 88, 685, 1508
Hpy166II GTNNAC 4 cut(s) 534, 790, 1075, 1156
Hpy188I TCNGA 4 cut(s) 236, 422, 1409, 1423
Hpy188III TCNNGA 2 cut(s) 512, 651
Hpy8I GTNNAC 4 cut(s) 534, 790, 1075, 1156
HpyAV CCTTC 2 cut(s) 580, 1555
HpyCH4IV ACGT 3 cut(s) 275, 1242, 1572
HpyCH4V TGCA 7 cut(s) 54, 581, 697, 790, 953, 968, 1056
HpyF10VI GCNNNNNNNGC 6 cut(s) 51, 158, 263, 638, 932, 1534
HpyF3I CTNAG 3 cut(s) 801, 1191, 1420
HpySE526I ACGT 3 cut(s) 275, 1242, 1572
HspAI GCGC 7 cut(s) 131, 245, 257, 630, 765, 773, 808
Ksp22I TGATCA 3 cut(s) 231, 336, 1096
KspI CCGCGG 1 cut(s) 753
Kzo9I GATC 7 cut(s) 28, 231, 336, 450, 1096, 1416, 1498
LmnI GCTCC 4 cut(s) 141, 166, 188, 627
Lsp1109I GCAGC 2 cut(s) 628, 893
LweI GCATC 5 cut(s) 684, 907, 955, 1225, 1524
MabI ACCWGGT 1 cut(s) 1444
MaeI CTAG 2 cut(s) 1223, 1259
MaeII ACGT 3 cut(s) 275, 1242, 1572
MaeIII GTNAC 2 cut(s) 278, 1254
MalI GATC 7 cut(s) 30, 233, 338, 452, 1098, 1418, 1500
MbiI CCGCTC 1 cut(s) 136
MboI GATC 7 cut(s) 28, 231, 336, 450, 1096, 1416, 1498
MboII GAAGA 6 cut(s) 181, 571, 1239, 1447, 1450, 1493
MhlI GDGCHC 2 cut(s) 241, 792
MlsI TGGCCA 2 cut(s) 836, 1166
MluCI AATT 5 cut(s) 316, 1088, 1302, 1388, 1561
MluNI TGGCCA 2 cut(s) 836, 1166
MlyI GAGTC 2 cut(s) 827, 1413
MmeI TCCRAC 1 cut(s) 982
Mox20I TGGCCA 2 cut(s) 836, 1166
MroXI GAANNNNTTC 1 cut(s) 590
MscI TGGCCA 2 cut(s) 836, 1166
MseI TTAA 3 cut(s) 408, 942, 1122
MslI CAYNNNNRTG 4 cut(s) 215, 399, 795, 1281
Msp20I TGGCCA 2 cut(s) 836, 1166
MspA1I CMGCKG 2 cut(s) 262, 752
MspI CCGG 2 cut(s) 372, 1128
MspR9I CCNGG 5 cut(s) 166, 373, 1128, 1129, 1446
Mva1269I GAATGC 2 cut(s) 583, 937
MvaI CCWGG 2 cut(s) 166, 1446
MvnI CGCG 6 cut(s) 245, 257, 269, 632, 752, 767
MwoI GCNNNNNNNGC 6 cut(s) 51, 158, 263, 638, 932, 1534
NciI CCSGG 3 cut(s) 373, 1128, 1129
NdeII GATC 7 cut(s) 28, 231, 336, 450, 1096, 1416, 1498
NlaIV GGNNCC 2 cut(s) 170, 1450
NmeAIII GCCGAG 2 cut(s) 443, 1028
NspI RCATGY 1 cut(s) 1064
PaeI GCATGC 1 cut(s) 1064
PaeR7I CTCGAG 1 cut(s) 651
PagI TCATGA 1 cut(s) 511
PcsI WCGNNNNNNNCGW 1 cut(s) 629
PctI GAATGC 2 cut(s) 583, 937
PdmI GAANNNNTTC 1 cut(s) 590
PfeI GAWTC 4 cut(s) 4, 113, 368, 1012
PflMI CCANNNNNTGG 1 cut(s) 1245
PkrI GCNGC 9 cut(s) 135, 148, 151, 261, 268, 643, 751, 754, 883
PleI GAGTC 2 cut(s) 826, 1412
PpsI GAGTC 2 cut(s) 826, 1412
Ppu21I YACGTR 1 cut(s) 276
PsiI TTATAA 1 cut(s) 20
Psp6I CCWGG 2 cut(s) 164, 1444
PspGI CCWGG 2 cut(s) 164, 1444
PspN4I GGNNCC 2 cut(s) 170, 1450
PspPI GGNCC 1 cut(s) 1156
RsaI GTAC 4 cut(s) 221, 857, 1108, 1370
RsaNI GTAC 4 cut(s) 220, 856, 1107, 1369
RseI CAYNNNNRTG 4 cut(s) 215, 399, 795, 1281
SacII CCGCGG 1 cut(s) 753
SaqAI TTAA 3 cut(s) 408, 942, 1122
SatI GCNGC 9 cut(s) 134, 147, 150, 260, 267, 642, 750, 753, 882
Sau3AI GATC 7 cut(s) 28, 231, 336, 450, 1096, 1416, 1498
Sau96I GGNCC 1 cut(s) 1156
SchI GAGTC 2 cut(s) 827, 1413
ScrFI CCNGG 5 cut(s) 166, 373, 1128, 1129, 1446
SduI GDGCHC 2 cut(s) 241, 792
SexAI ACCWGGT 1 cut(s) 1444
SfaNI GCATC 5 cut(s) 684, 907, 955, 1225, 1524
Sfr274I CTCGAG 1 cut(s) 651
Sfr303I CCGCGG 1 cut(s) 753
SgrBI CCGCGG 1 cut(s) 753
SinI GGWCC 1 cut(s) 1156
SlaI CTCGAG 1 cut(s) 651
SmaI CCCGGG 1 cut(s) 1129
SmiMI CAYNNNNRTG 4 cut(s) 215, 399, 795, 1281
SmlI CTYRAG 4 cut(s) 71, 651, 815, 1529
SmoI CTYRAG 4 cut(s) 71, 651, 815, 1529
SphI GCATGC 1 cut(s) 1064
SrfI GCCCGGGC 1 cut(s) 1129
Sse9I AATT 5 cut(s) 316, 1088, 1302, 1388, 1561
SspMI CTAG 2 cut(s) 1223, 1259
StyD4I CCNGG 5 cut(s) 164, 371, 1126, 1127, 1444
TaiI ACGT 3 cut(s) 278, 1245, 1575
TaqI TCGA 7 cut(s) 453, 594, 652, 821, 860, 977, 1392
TasI AATT 5 cut(s) 316, 1088, 1302, 1388, 1561
TatI WGTACW 3 cut(s) 219, 855, 1368
TauI GCSGC 7 cut(s) 136, 149, 152, 262, 269, 752, 755
TfiI GAWTC 4 cut(s) 4, 113, 368, 1012
Tru1I TTAA 3 cut(s) 408, 942, 1122
Tru9I TTAA 3 cut(s) 408, 942, 1122
TscAI CASTG 4 cut(s) 31, 751, 844, 1459
TseI GCWGC 2 cut(s) 641, 881
TspDTI ATGAA 9 cut(s) 205, 383, 612, 971, 1265, 1337, 1347, 1448, 1477
TspGWI ACGGA 1 cut(s) 598
TspMI CCCGGG 1 cut(s) 1127
TspRI CASTG 4 cut(s) 31, 751, 844, 1459
Van91I CCANNNNNTGG 1 cut(s) 1245
VneI GTGCAC 1 cut(s) 788
VpaK11BI GGWCC 1 cut(s) 1156
XapI RAATTY 3 cut(s) 1302, 1388, 1561
XceI RCATGY 1 cut(s) 1064
XcmI CCANNNNNNNNNTGG 1 cut(s) 1174
XhoI CTCGAG 1 cut(s) 651
XmaI CCCGGG 1 cut(s) 1127
XmiI GTMKAC 1 cut(s) 1074
XmnI GAANNNNTTC 1 cut(s) 590
XspI CTAG 2 cut(s) 1223, 1259
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.