Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g03350 |
| malus_domestica | MD02G1033000.v1.1 |
| prunus_persica | Prupe.7G242300_v2.0.a1 |
| pyrus_communis | pycom02g01480 pycom02g02710 pycom04g20500 |
| rosa_chinensis | RchiOBHm_Chr2g0088571 |
| rosa_laevigata | RLG00000015966 |
| rosa_multiflora | Rmu_co8371145.1_g000001 Rmu_sc0004733.1_g000003 |
| rosa_roxburghii | Rroxscaffold_2G00152540 |
| rosa_rugosa | Rorug01G0485200 |
| rosa_samantha | Rh2AG040500 Rh2BG039200 Rh2CG040100 Rh2DG039500 |
| rosa_wichuraiana | Rw2G003140 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 181 |
| AciI | CCGC | 2 cut(s) | 49, 65 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 55 |
| AluBI | AGCT | 1 cut(s) | 145 |
| AluI | AGCT | 1 cut(s) | 145 |
| AspS9I | GGNCC | 1 cut(s) | 46 |
| AvaII | GGWCC | 1 cut(s) | 46 |
| BceAI | ACGGC | 1 cut(s) | 162 |
| Bme18I | GGWCC | 1 cut(s) | 46 |
| BmgT120I | GGNCC | 1 cut(s) | 46 |
| BmiI | GGNNCC | 1 cut(s) | 47 |
| BpmI | CTGGAG | 1 cut(s) | 15 |
| BpuEI | CTTGAG | 1 cut(s) | 131 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 55 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 55 |
| BslFI | GGGAC | 1 cut(s) | 59 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 55 |
| BsmFI | GGGAC | 1 cut(s) | 59 |
| BspACI | CCGC | 2 cut(s) | 49, 65 |
| BspLI | GGNNCC | 1 cut(s) | 47 |
| Bst4CI | ACNGT | 1 cut(s) | 91 |
| Bst6I | CTCTTC | 1 cut(s) | 43 |
| BstEII | GGTNACC | 1 cut(s) | 59 |
| BstNSI | RCATGY | 1 cut(s) | 177 |
| BstPI | GGTNACC | 1 cut(s) | 59 |
| Cfr13I | GGNCC | 1 cut(s) | 46 |
| CviAII | CATG | 2 cut(s) | 158, 174 |
| CviJI | RGCY | 1 cut(s) | 145 |
| CviKI_1 | RGCY | 1 cut(s) | 145 |
| Eam1104I | CTCTTC | 1 cut(s) | 43 |
| EarI | CTCTTC | 1 cut(s) | 43 |
| Eco47I | GGWCC | 1 cut(s) | 46 |
| Eco91I | GGTNACC | 1 cut(s) | 59 |
| EcoO65I | GGTNACC | 1 cut(s) | 59 |
| FaeI | CATG | 2 cut(s) | 161, 177 |
| FaiI | YATR | 3 cut(s) | 159, 165, 175 |
| FaqI | GGGAC | 1 cut(s) | 59 |
| FatI | CATG | 2 cut(s) | 157, 173 |
| FauI | CCCGC | 1 cut(s) | 72 |
| FblI | GTMKAC | 1 cut(s) | 181 |
| GsuI | CTGGAG | 1 cut(s) | 15 |
| Hin1II | CATG | 2 cut(s) | 161, 177 |
| HinfI | GANTC | 2 cut(s) | 35, 79 |
| Hpy166II | GTNNAC | 2 cut(s) | 17, 182 |
| Hpy188I | TCNGA | 2 cut(s) | 75, 84 |
| Hpy188III | TCNNGA | 1 cut(s) | 32 |
| Hpy8I | GTNNAC | 2 cut(s) | 17, 182 |
| HpyAV | CCTTC | 1 cut(s) | 125 |
| HpyCH4III | ACNGT | 1 cut(s) | 91 |
| HpyCH4V | TGCA | 1 cut(s) | 129 |
| Hsp92II | CATG | 2 cut(s) | 161, 177 |
| LpnPI | CCDG | 2 cut(s) | 45, 155 |
| MaeIII | GTNAC | 1 cut(s) | 59 |
| MboII | GAAGA | 1 cut(s) | 30 |
| MluCI | AATT | 2 cut(s) | 10, 69 |
| MlyI | GAGTC | 1 cut(s) | 29 |
| MseI | TTAA | 1 cut(s) | 137 |
| MslI | CAYNNNNRTG | 1 cut(s) | 124 |
| NlaIII | CATG | 2 cut(s) | 161, 177 |
| NlaIV | GGNNCC | 1 cut(s) | 47 |
| NspI | RCATGY | 1 cut(s) | 177 |
| PfeI | GAWTC | 1 cut(s) | 79 |
| PleI | GAGTC | 1 cut(s) | 29 |
| PpsI | GAGTC | 1 cut(s) | 29 |
| PspEI | GGTNACC | 1 cut(s) | 59 |
| PspN4I | GGNNCC | 1 cut(s) | 47 |
| PspPI | GGNCC | 1 cut(s) | 46 |
| RseI | CAYNNNNRTG | 1 cut(s) | 124 |
| SaqAI | TTAA | 1 cut(s) | 137 |
| Sau96I | GGNCC | 1 cut(s) | 46 |
| SchI | GAGTC | 1 cut(s) | 29 |
| SetI | ASST | 5 cut(s) | 108, 137, 147, 187, 195 |
| SgeI | CNNG | 8 cut(s) | 44, 54, 76, 119, 154, 160, 170, 186 |
| SinI | GGWCC | 1 cut(s) | 46 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 124 |
| SmlI | CTYRAG | 1 cut(s) | 146 |
| SmoI | CTYRAG | 1 cut(s) | 146 |
| Sse9I | AATT | 2 cut(s) | 10, 69 |
| SsiI | CCGC | 2 cut(s) | 49, 65 |
| TaaI | ACNGT | 1 cut(s) | 91 |
| TasI | AATT | 2 cut(s) | 10, 69 |
| TfiI | GAWTC | 1 cut(s) | 79 |
| Tru1I | TTAA | 1 cut(s) | 137 |
| Tru9I | TTAA | 1 cut(s) | 137 |
| VpaK11BI | GGWCC | 1 cut(s) | 46 |
| XceI | RCATGY | 1 cut(s) | 177 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 39 |
| XmiI | GTMKAC | 1 cut(s) | 181 |