RLG00000015966

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0014629
Physical Location & Seq
Forward (+)
2805601 .. 2807214
1614 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000015966

Sequence Viewer

Length: 1614 bp
ATGGTCCCAAGACACATACCCGCCATTTTTCAGATGATTCAAAAGACCGTTAGAACCAACGATCTCATTCTCCTCTGCCAAAAATGCAAAACCCTAAATCAGCTCAAGCAAATCCATGCCCACCTCCTCACTTCCACCCGACCCGAAAACCCCTACGCCATCGCGCCGCTCCTCTCCGCCGCCGCCAAAGACGCTTCCTTGTTCTCCTACTCTTGCTCAATCTTCAAACACCACCATCACCACCGCAACACTTTCATGTACAACACCATGATCAGAGCGCACGCGCAATCACACGCGCCGGTGACTGCGGTCATGTGCTATCTAGACTTGTTGAGTTACGGATTGATTGCTAATAAGTTTACTTTCCCGCCATTGATCAAAGCTTGCTCGATTTTGGTCCATAATTCTGAGCTAACCGGAAGGTTGGTTCATGCCCATGTTGTGAAATTCGGGTTCGGAGATGACCCGTTTGTTGTTAGCGGGCTAATCGAGTTTTACTCGGTGATTCTTGAGATGGGTGCTGCCCAATTGGTGTTTGATAAAAGTCCTAGCAAAGATGTGGTGGTGTGGACGGCGATGGTTGGTGGGTATGGGAAGATTGGGGATGTTGAGAATGCACGGAAGATGTTCGATGAAATGCCTGAGAGAAATGCTGTGTCGTGGAGTGCGATGATGGCTGCGTATTCTCGAGTGAGCGATTTTAGAGAGGTGGTTTGTTTGTTTAGGCAAATGCAAGAGGTGGGGACGAGGCCTAATGAGTCTGTTCTTGTTAGTGTTCTCACTGCCGCTGCTCATTTGGGTGCGGTGGCCCAAGGGTTGTGGGTGCACTCCTATGCTAAGAGGCACGGGCTTGAGTCGAATAGGATATTGGCCACTGCATTGGTTGATATGTATTCCAAATGTGGCTATGTGGAAGCAGCTATGAAGGTTTTTGAGGGCATTTGTAATAAGGATGCCAGAGCGTGGAATGCTATGATTACTGGGGTTGCGATGAATGGGGATGCAAGGAAATCGATTGAGCTGTTTGATAAAATGGTTGTAGATAAGATCCAACCTACAGAAACCACATTTGTTGCTGTTCTCTCGGCTTGTACCCATGCAAAAATGGTAGACAAGGGACTTGAACTGTTTGATCAAATGAGTACCCTTTATGGGGTTGAACCCGGGCTTCAGCACTATGCTTGTGTTGTTGACCTCTTGGCCAGAGCGGGCATGTTAGAGGAAGCTGAGAAGTTTATAGAGGACAAGATGGGAGGACTAGGAAGAGGGGATGCCAACGTGTGGGGGGCGTTACTGGGTGCGTGTAGAGTTCATGGGAATGTTGAACTGGGGGACAGAATTTGGAAAAAGCTGGCTGATATGGGAGTAGCCGATTGCGGTATTCATGTTCTTTCATATAACATGTACAAGGAAGCTGGCTTGGAATTGGAGGCAAAGAGAGTCCGAGATATGATCTCAGAATGTGGAATGAGGAAGAAACCTGGTTCTAGTGTGATAGAGGTAAATGGAGTGGCCGAAGAGTTCATTGTTGGTGATCTTTGTCCTCCACGAGCACAAGAAATGCTTAAGATACTTGATTCTTTTTGTAAAATGGTGAATTTGGAGGATGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

538

Amino Acids

59.4

Weight (kDa)

6.85

Isoelectric Point (pI)

40.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 185 - 217 2.9e-06 PPR repeat family
PPR PF01535 188 - 217 5.9e-07 PPR repeat
PPR_2 PF13041 318 - 365 1.5e-07 PPR repeat family
PPR_long PF17177 330 - 418 3.2e-06 Pentacotripeptide-repeat region of PRORP
E_motif PF20431 438 - 500 1.9e-07 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014629)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03350
malus_domestica MD02G1033000.v1.1
prunus_persica Prupe.7G242300_v2.0.a1
pyrus_communis pycom02g01480 pycom02g02710 pycom04g20500
rosa_chinensis RchiOBHm_Chr2g0088571
rosa_laevigata RLG00000015966
rosa_multiflora Rmu_co8371145.1_g000001 Rmu_sc0004733.1_g000003
rosa_roxburghii Rroxscaffold_2G00152540
rosa_rugosa Rorug01G0485200
rosa_samantha Rh2AG040500 Rh2BG039200 Rh2CG040100 Rh2DG039500
rosa_wichuraiana Rw2G003140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 963, 1281
AccBSI CCGCTC 2 cut(s) 169, 1208
AccI GTMKAC 1 cut(s) 1110
AccII CGCG 3 cut(s) 164, 284, 296
AclWI GGATC 1 cut(s) 1042
AcoI YGGCCR 3 cut(s) 870, 1200, 1512
AcsI RAATTY 3 cut(s) 446, 1338, 1597
AcuI CTGAAG 1 cut(s) 1154
AfaI GTAC 4 cut(s) 260, 1093, 1144, 1406
AfiI CCNNNNNNNGG 4 cut(s) 963, 1152, 1153, 1281
AflII CTTAAG 1 cut(s) 1565
AflIII ACRYGT 2 cut(s) 1278, 1401
AgsI TTSAA 5 cut(s) 41, 226, 1124, 1160, 1325
AjnI CCWGG 1 cut(s) 1480
AjuI GAANNNNNNNTTGG 2 cut(s) 851, 883
AloI GAACNNNNNNTCC 2 cut(s) 411, 443
AluBI AGCT 8 cut(s) 103, 383, 412, 920, 1021, 1226, 1351, 1415
AluI AGCT 8 cut(s) 103, 383, 412, 920, 1021, 1226, 1351, 1415
Alw21I GWGCWC 2 cut(s) 828, 1555
Alw44I GTGCAC 1 cut(s) 824
AlwI GGATC 1 cut(s) 1042
Ama87I CYCGRG 2 cut(s) 687, 1163
AoxI GGCC 5 cut(s) 749, 807, 870, 1200, 1512
ApaLI GTGCAC 1 cut(s) 824
ApeKI GCWGC 4 cut(s) 521, 677, 788, 917
ApoI RAATTY 3 cut(s) 446, 1338, 1597
Asp700I GAANNNNTTC 1 cut(s) 626
AspLEI GCGC 4 cut(s) 166, 280, 286, 298
AspS9I GGNCC 3 cut(s) 4, 397, 808
AsuC2I CCSGG 2 cut(s) 1164, 1165
AsuHPI GGTGA 5 cut(s) 230, 313, 514, 1544, 1606
AvaI CYCGRG 2 cut(s) 687, 1163
AvaII GGWCC 2 cut(s) 4, 397
BaeGI GKGCMC 1 cut(s) 828
BalI TGGCCA 2 cut(s) 872, 1202
BauI CACGAG 1 cut(s) 1548
Bbv12I GWGCWC 2 cut(s) 828, 1555
BbvI GCAGC 4 cut(s) 508, 664, 775, 929
BccI CCATC 6 cut(s) 167, 243, 508, 571, 667, 1243
BceAI ACGGC 1 cut(s) 588
BcgI CGANNNNNNTGC 2 cut(s) 993, 1027
BciT130I CCWGG 1 cut(s) 1482
BclI TGATCA 3 cut(s) 270, 375, 1132
BcnI CCSGG 2 cut(s) 1164, 1165
BfaI CTAG 4 cut(s) 323, 549, 1259, 1488
BfmI CTRYAG 1 cut(s) 1056
BfrI CTTAAG 1 cut(s) 1565
BisI GCNGC 8 cut(s) 167, 180, 183, 522, 678, 786, 789, 918
BlsI GCNGC 8 cut(s) 168, 181, 184, 523, 679, 787, 790, 919
Bme1390I CCNGG 3 cut(s) 1164, 1165, 1482
Bme18I GGWCC 2 cut(s) 4, 397
BmeT110I CYCGRG 2 cut(s) 687, 1163
BmgT120I GGNCC 3 cut(s) 4, 397, 808
BmiI GGNNCC 1 cut(s) 6
BmrFI CCNGG 3 cut(s) 1164, 1165, 1482
BmrI ACTGGG 3 cut(s) 990, 1304, 1337
BmsI GCATC 3 cut(s) 943, 991, 1261
BmuI ACTGGG 3 cut(s) 990, 1304, 1337
BoxI GACNNNNGTC 1 cut(s) 308
BplI GAGNNNNNCTC 2 cut(s) 482, 514
BpuEI CTTGAG 3 cut(s) 89, 530, 872
BpuMI CCSGG 2 cut(s) 1164, 1165
Bsa29I ATCGAT 1 cut(s) 1013
BsaJI CCNNGG 2 cut(s) 811, 1163
BsaWI WCCGGW 1 cut(s) 416
Bsc4I CCNNNNNNNGG 4 cut(s) 963, 1152, 1153, 1281
Bse118I RCCGGY 1 cut(s) 298
Bse1I ACTGG 3 cut(s) 985, 1299, 1332
BseBI CCWGG 1 cut(s) 1482
BseCI ATCGAT 1 cut(s) 1013
BseDI CCNNGG 2 cut(s) 811, 1163
BseGI GGATG 5 cut(s) 610, 958, 1006, 1276, 1612
BseLI CCNNNNNNNGG 4 cut(s) 963, 1152, 1153, 1281
BseMII CTCAG 4 cut(s) 399, 633, 1218, 1470
BseNI ACTGG 3 cut(s) 985, 1299, 1332
BseRI GAGGAG 3 cut(s) 62, 116, 161
BseSI GKGCMC 1 cut(s) 828
BseXI GCAGC 4 cut(s) 508, 664, 775, 929
Bsh1236I CGCG 3 cut(s) 164, 284, 296
BshFI GGCC 5 cut(s) 751, 809, 872, 1202, 1514
BshVI ATCGAT 1 cut(s) 1013
BsiHKAI GWGCWC 2 cut(s) 828, 1555
BsiHKCI CYCGRG 2 cut(s) 687, 1163
BsiSI CCGG 3 cut(s) 299, 417, 1164
BslFI GGGAC 3 cut(s) 757, 1131, 1346
BslI CCNNNNNNNGG 4 cut(s) 963, 1152, 1153, 1281
BsmFI GGGAC 3 cut(s) 757, 1131, 1346
BsmI GAATGC 2 cut(s) 619, 973
BsnI GGCC 5 cut(s) 751, 809, 872, 1202, 1514
BsoBI CYCGRG 2 cut(s) 687, 1163
Bsp1286I GDGCHC 2 cut(s) 828, 1555
Bsp1407I TGTACA 2 cut(s) 258, 1404
Bsp143I GATC 7 cut(s) 61, 270, 375, 1047, 1132, 1452, 1534
BspANI GGCC 5 cut(s) 751, 809, 872, 1202, 1514
BspCNI CTCAG 4 cut(s) 400, 634, 1219, 1469
BspDI ATCGAT 1 cut(s) 1013
BspFNI CGCG 3 cut(s) 164, 284, 296
BspLI GGNNCC 1 cut(s) 6
BspPI GGATC 1 cut(s) 1042
BspTI CTTAAG 1 cut(s) 1565
BsrBI CCGCTC 2 cut(s) 169, 1208
BsrFI RCCGGY 1 cut(s) 298
BsrGI TGTACA 2 cut(s) 258, 1404
BsrI ACTGG 3 cut(s) 985, 1299, 1332
BssAI RCCGGY 1 cut(s) 298
BssECI CCNNGG 2 cut(s) 811, 1163
BssMI GATC 7 cut(s) 61, 270, 375, 1047, 1132, 1452, 1534
BssSI CACGAG 1 cut(s) 1548
BssT1I CCWWGG 1 cut(s) 811
Bst2BI CACGAG 1 cut(s) 1548
Bst2UI CCWGG 1 cut(s) 1482
Bst4CI ACNGT 2 cut(s) 49, 1128
Bst6I CTCTTC 2 cut(s) 1258, 1512
BstAFI CTTAAG 1 cut(s) 1565
BstAUI TGTACA 2 cut(s) 258, 1404
BstC8I GCNNGC 6 cut(s) 282, 385, 482, 1210, 1353, 1417
BstDEI CTNAG 5 cut(s) 408, 642, 837, 1227, 1456
BstF5I GGATG 5 cut(s) 610, 958, 1006, 1276, 1612
BstFNI CGCG 3 cut(s) 164, 284, 296
BstHHI GCGC 4 cut(s) 166, 280, 286, 298
BstKTI GATC 7 cut(s) 64, 273, 378, 1050, 1135, 1455, 1537
BstMBI GATC 7 cut(s) 61, 270, 375, 1047, 1132, 1452, 1534
BstMWI GCNNNNNNNGC 4 cut(s) 84, 191, 674, 968
BstNI CCWGG 1 cut(s) 1482
BstNSI RCATGY 2 cut(s) 1216, 1405
BstPAI GACNNNNGTC 1 cut(s) 308
BstSCI CCNGG 3 cut(s) 1162, 1163, 1480
BstSFI CTRYAG 1 cut(s) 1056
BstSLI GKGCMC 1 cut(s) 828
BstUI CGCG 3 cut(s) 164, 284, 296
BstV1I GCAGC 4 cut(s) 508, 664, 775, 929
BstX2I RGATCY 1 cut(s) 1047
BstXI CCANNNNNNTGG 1 cut(s) 880
BstYI RGATCY 1 cut(s) 1047
Bsu15I ATCGAT 1 cut(s) 1013
BsuRI GGCC 5 cut(s) 751, 809, 872, 1202, 1514
BsuTUI ATCGAT 1 cut(s) 1013
BtgZI GCGATG 4 cut(s) 145, 590, 683, 1004
BtsCI GGATG 5 cut(s) 610, 958, 1006, 1276, 1612
BtsI GCAGTG 2 cut(s) 780, 873
BtsIMutI CAGTG 2 cut(s) 780, 873
Cac8I GCNNGC 6 cut(s) 282, 385, 482, 1210, 1353, 1417
CfoI GCGC 4 cut(s) 166, 280, 286, 298
Cfr10I RCCGGY 1 cut(s) 298
Cfr13I GGNCC 3 cut(s) 4, 397, 808
Cfr9I CCCGGG 1 cut(s) 1163
ClaI ATCGAT 1 cut(s) 1013
CseI GACGC 1 cut(s) 200
CsiI ACCWGGT 1 cut(s) 1480
Csp6I GTAC 4 cut(s) 259, 1092, 1143, 1405
CspCI CAANNNNNGTGG 4 cut(s) 800, 835, 1054, 1089
CviQI GTAC 4 cut(s) 259, 1092, 1143, 1405
DdeI CTNAG 5 cut(s) 408, 642, 837, 1227, 1456
DpnI GATC 7 cut(s) 63, 272, 377, 1049, 1134, 1454, 1536
DpnII GATC 7 cut(s) 61, 270, 375, 1047, 1132, 1452, 1534
EaeI YGGCCR 3 cut(s) 870, 1200, 1512
Eam1104I CTCTTC 2 cut(s) 1258, 1512
EarI CTCTTC 2 cut(s) 1258, 1512
EciI GGCGGA 1 cut(s) 166
Eco130I CCWWGG 1 cut(s) 811
Eco147I AGGCCT 1 cut(s) 751
Eco47I GGWCC 2 cut(s) 4, 397
Eco57I CTGAAG 1 cut(s) 1154
Eco88I CYCGRG 2 cut(s) 687, 1163
EcoRII CCWGG 1 cut(s) 1480
EcoT14I CCWWGG 1 cut(s) 811
ErhI CCWWGG 1 cut(s) 811
FalI AAGNNNNNCTT 2 cut(s) 1548, 1580
FaqI GGGAC 3 cut(s) 757, 1131, 1346
FauI CCCGC 4 cut(s) 28, 375, 473, 1201
FbaI TGATCA 3 cut(s) 270, 375, 1132
FblI GTMKAC 1 cut(s) 1110
Fnu4HI GCNGC 8 cut(s) 167, 180, 183, 522, 678, 786, 789, 918
FokI GGATG 4 cut(s) 617, 965, 1013, 1283
Fsp4HI GCNGC 8 cut(s) 167, 180, 183, 522, 678, 786, 789, 918
FspBI CTAG 4 cut(s) 323, 549, 1259, 1488
GlaI GCGC 4 cut(s) 165, 279, 285, 297
GluI GCNGC 8 cut(s) 167, 180, 183, 522, 678, 786, 789, 918
HaeIII GGCC 5 cut(s) 751, 809, 872, 1202, 1514
HapII CCGG 3 cut(s) 299, 417, 1164
HgaI GACGC 1 cut(s) 200
HhaI GCGC 4 cut(s) 166, 280, 286, 298
Hin6I GCGC 4 cut(s) 164, 278, 284, 296
HinP1I GCGC 4 cut(s) 164, 278, 284, 296
HincII GTYRAC 1 cut(s) 1192
HindII GTYRAC 1 cut(s) 1192
HindIII AAGCTT 1 cut(s) 381
HinfI GANTC 6 cut(s) 37, 505, 758, 854, 1440, 1577
HpaII CCGG 3 cut(s) 299, 417, 1164
HphI GGTGA 5 cut(s) 230, 313, 514, 1544, 1606
Hpy166II GTNNAC 5 cut(s) 360, 570, 826, 1111, 1192
Hpy188I TCNGA 6 cut(s) 33, 275, 409, 458, 1445, 1459
Hpy188III TCNNGA 3 cut(s) 323, 509, 687
Hpy8I GTNNAC 5 cut(s) 360, 570, 826, 1111, 1192
HpyAV CCTTC 2 cut(s) 414, 919
HpyCH4III ACNGT 2 cut(s) 49, 1128
HpyCH4IV ACGT 1 cut(s) 1278
HpyCH4V TGCA 7 cut(s) 87, 617, 733, 826, 878, 1004, 1100
HpyF10VI GCNNNNNNNGC 4 cut(s) 84, 191, 674, 968
HpyF3I CTNAG 5 cut(s) 408, 642, 837, 1227, 1456
HpySE526I ACGT 1 cut(s) 1278
HspAI GCGC 4 cut(s) 164, 278, 284, 296
Ksp22I TGATCA 3 cut(s) 270, 375, 1132
Kzo9I GATC 7 cut(s) 61, 270, 375, 1047, 1132, 1452, 1534
LmnI GCTCC 1 cut(s) 174
Lsp1109I GCAGC 4 cut(s) 508, 664, 775, 929
LweI GCATC 3 cut(s) 943, 991, 1261
MabI ACCWGGT 1 cut(s) 1480
MaeI CTAG 4 cut(s) 323, 549, 1259, 1488
MaeII ACGT 1 cut(s) 1278
MaeIII GTNAC 3 cut(s) 301, 335, 1290
MalI GATC 7 cut(s) 63, 272, 377, 1049, 1134, 1454, 1536
MbiI CCGCTC 2 cut(s) 169, 1208
MboI GATC 7 cut(s) 61, 270, 375, 1047, 1132, 1452, 1534
MboII GAAGA 6 cut(s) 214, 607, 634, 1275, 1486, 1529
MfeI CAATTG 1 cut(s) 527
MflI RGATCY 1 cut(s) 1047
MhlI GDGCHC 2 cut(s) 828, 1555
MlsI TGGCCA 2 cut(s) 872, 1202
MluCI AATT 6 cut(s) 403, 446, 527, 1338, 1424, 1597
MluNI TGGCCA 2 cut(s) 872, 1202
MlyI GAGTC 3 cut(s) 767, 863, 1449
MmeI TCCRAC 1 cut(s) 1075
Mox20I TGGCCA 2 cut(s) 872, 1202
MroXI GAANNNNTTC 1 cut(s) 626
MscI TGGCCA 2 cut(s) 872, 1202
MseI TTAA 1 cut(s) 1566
MslI CAYNNNNRTG 5 cut(s) 254, 435, 798, 831, 1317
Msp20I TGGCCA 2 cut(s) 872, 1202
MspA1I CMGCKG 1 cut(s) 788
MspCI CTTAAG 1 cut(s) 1565
MspI CCGG 3 cut(s) 299, 417, 1164
MspR9I CCNGG 3 cut(s) 1164, 1165, 1482
MunI CAATTG 1 cut(s) 527
Mva1269I GAATGC 2 cut(s) 619, 973
MvaI CCWGG 1 cut(s) 1482
MvnI CGCG 3 cut(s) 164, 284, 296
MwoI GCNNNNNNNGC 4 cut(s) 84, 191, 674, 968
NciI CCSGG 2 cut(s) 1164, 1165
NdeII GATC 7 cut(s) 61, 270, 375, 1047, 1132, 1452, 1534
NlaIV GGNNCC 1 cut(s) 6
NmeAIII GCCGAG 1 cut(s) 1064
NmuCI GTSAC 1 cut(s) 301
NspI RCATGY 2 cut(s) 1216, 1405
PaeR7I CTCGAG 1 cut(s) 687
PceI AGGCCT 1 cut(s) 751
PciI ACATGT 1 cut(s) 1401
PcsI WCGNNNNNNNCGW 1 cut(s) 665
PctI GAATGC 2 cut(s) 619, 973
PdmI GAANNNNTTC 1 cut(s) 626
PfeI GAWTC 3 cut(s) 37, 505, 1577
PflMI CCANNNNNTGG 2 cut(s) 963, 1281
PkrI GCNGC 8 cut(s) 168, 181, 184, 523, 679, 787, 790, 919
PleI GAGTC 3 cut(s) 766, 862, 1448
PpsI GAGTC 3 cut(s) 766, 862, 1448
PscI ACATGT 1 cut(s) 1401
PshAI GACNNNNGTC 1 cut(s) 308
Psp6I CCWGG 1 cut(s) 1480
PspGI CCWGG 1 cut(s) 1480
PspN4I GGNNCC 1 cut(s) 6
PspPI GGNCC 3 cut(s) 4, 397, 808
PsuI RGATCY 1 cut(s) 1047
RsaI GTAC 4 cut(s) 260, 1093, 1144, 1406
RsaNI GTAC 4 cut(s) 259, 1092, 1143, 1405
RseI CAYNNNNRTG 5 cut(s) 254, 435, 798, 831, 1317
SaqAI TTAA 1 cut(s) 1566
SatI GCNGC 8 cut(s) 167, 180, 183, 522, 678, 786, 789, 918
Sau3AI GATC 7 cut(s) 61, 270, 375, 1047, 1132, 1452, 1534
Sau96I GGNCC 3 cut(s) 4, 397, 808
SchI GAGTC 3 cut(s) 767, 863, 1449
ScrFI CCNGG 3 cut(s) 1164, 1165, 1482
SduI GDGCHC 2 cut(s) 828, 1555
SexAI ACCWGGT 1 cut(s) 1480
SfaNI GCATC 3 cut(s) 943, 991, 1261
SfcI CTRYAG 1 cut(s) 1056
Sfr274I CTCGAG 1 cut(s) 687
SgrAI CRCCGGYG 1 cut(s) 298
SinI GGWCC 2 cut(s) 4, 397
SlaI CTCGAG 1 cut(s) 687
SmaI CCCGGG 1 cut(s) 1165
SmiMI CAYNNNNRTG 5 cut(s) 254, 435, 798, 831, 1317
SmlI CTYRAG 5 cut(s) 104, 509, 687, 851, 1565
SmoI CTYRAG 5 cut(s) 104, 509, 687, 851, 1565
Sse9I AATT 6 cut(s) 403, 446, 527, 1338, 1424, 1597
SseBI AGGCCT 1 cut(s) 751
SspMI CTAG 4 cut(s) 323, 549, 1259, 1488
StuI AGGCCT 1 cut(s) 751
StyD4I CCNGG 3 cut(s) 1162, 1163, 1480
StyI CCWWGG 1 cut(s) 811
TaaI ACNGT 2 cut(s) 49, 1128
TaiI ACGT 1 cut(s) 1281
TaqI TCGA 6 cut(s) 389, 489, 630, 688, 857, 1013
TasI AATT 6 cut(s) 403, 446, 527, 1338, 1424, 1597
TatI WGTACW 2 cut(s) 258, 1404
TauI GCSGC 4 cut(s) 169, 182, 185, 788
TfiI GAWTC 3 cut(s) 37, 505, 1577
Tru1I TTAA 1 cut(s) 1566
Tru9I TTAA 1 cut(s) 1566
TscAI CASTG 2 cut(s) 787, 880
TseFI GTSAC 1 cut(s) 301
TseI GCWGC 4 cut(s) 521, 677, 788, 917
Tsp45I GTSAC 1 cut(s) 301
TspDTI ATGAA 9 cut(s) 244, 419, 648, 938, 1007, 1301, 1373, 1383, 1513
TspGWI ACGGA 2 cut(s) 354, 634
TspMI CCCGGG 1 cut(s) 1163
TspRI CASTG 2 cut(s) 787, 880
Van91I CCANNNNNTGG 2 cut(s) 963, 1281
Vha464I CTTAAG 1 cut(s) 1565
VneI GTGCAC 1 cut(s) 824
VpaK11BI GGWCC 2 cut(s) 4, 397
XapI RAATTY 3 cut(s) 446, 1338, 1597
XbaI TCTAGA 1 cut(s) 322
XceI RCATGY 2 cut(s) 1216, 1405
XhoI CTCGAG 1 cut(s) 687
XmaI CCCGGG 1 cut(s) 1163
XmiI GTMKAC 1 cut(s) 1110
XmnI GAANNNNTTC 1 cut(s) 626
XspI CTAG 4 cut(s) 323, 549, 1259, 1488
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.