Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0005500

Physical Location & Seq

Genomic Coordinates Reverse (-)

3574663 .. 3581541

Gene Structure 6879 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g06790.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3021 bp

ATGGATTTGCTTCCGGGAGGGAGTTCAAGCATGGTGAAGAAAACCGGGTTCAGGTCACTGAAGCTGGTGAACGTTGATATGGACCAAGTTCTGGGAGACAAGCCTGTTGGGGTTGACTATGGGAGGCTTGACAATGGTCTATCTTACTATGTTCGTTGCAATTCTAAGCCCAAAATGAGAGCAGCCCTCGCTCTTGCTGTTAAAGTAGGGTCAGTTTTGGAAGAGGAGGAAGAACGAGGAGTTGCTCACATTGTTGAGCATCTTGCTTTCAGTGCTACTCAGAAGTACACAAATCATGATATAGTCAGATTTCTTGAGAGTATTGGGGCAGAATTTGGGGCTTGCCAGAATGCGGTGACGTCTGCCGATGACACTGTTTATGAGTTATTTGTTCCTGTTGACAAGCATGAACTCTTATCTGAGGCGATTTCTGTATTGGCAGAATTCAGTTCTGAGATTCGTGTCTCAAGAGACGATTTAGAAAGAGAGAGAGGTGCTGTTATGGAAGAGTACAGAGGGAATCGAAACGCTACGGGAAGGATGCAGGATGCTCATTGGCTTTTGATGATGGCCGGTTCAAAGTATGCTGAGCGCTTACCTATTGGATTAGAGAAGGTAATTCGAACTGTTTCTCCTGAGACTGTGAAGCAATTTTATCAGAAGTGGTACCATTTAAGCAATATGGCAGTGATAGCTGTAGGAGATTTCCCTGATACTGAGAGTGTAGTTGAGTTGATAAAGAATCAATTTGGGCATAAAATTTCCGCACCTGAGCGTGCACTTATACCAACATATCAAGTTCCATCTCATGAAGAGCCACGTTATTCATGTTTCATTGAATCTGAGGCAACCGGGTCTGCAGTGATTATTAGCTATAAGACTCCAGCTGATGAGCTCAATACTGTGAGGGACTATAGGGATTTACTGGCAGAGTCAATGTTCCTCTATGCTCTAAACCAGAGGTTCTTTAAAATAGCTCGTAGAAAAGATCCACCATTCTTTTCATGCTCAACTTCCGCGGATGTTCTGGTTAATCCTTTGAAGGCTTATATGATTACTTCATCTTGTAAAGAAAAGGGAACGATTCAGGCCCTAGAGTCGATGCTGATTGAGGTTGCCAGGGTGCGGCTACATGGGTTTTCAGAACGGGAAGTGTCTACAGTTCGAGCTTTACTGATGTCAGAGATTGAATCTGCATATTTAGAACGTGATCAAATGCAGTCAACTAGCTTGCGAGATGAATATTTACAGCATTTTCTCCGTAATGAACCTGTTATTGGGATTGAGTATGAGGCTCAACTCCAGAAGACCCTTCTACCTTCTATAACAGCAGCAGAGATATCCAAATTTGCTGAGAAGTTACAAACATCATGCAGCTGTGTCATTAAGACAATTGAACCACGAGCTTCTGCAATAGTAGATGATCTGAAAAATGTTGTATCTAAAATCAGTGCTCTTGAGGAAGAAAGAATCATTTCTCCATGGGATGAAGAACATATTCCAGAAGAAATTGTTAGCACAAAACCTAATCCAGGGAACATTGTGCAGCAATGTGAATATCCAAATATTGGAGCTACTGAATTGGTTCTATCGAATGGCATGAGAGTTTGCTATAAGAGTACAGACTTTCTTGATGATCAGGTCATCTTTACAGGGTTCTCATATGGGGGCTTATCTGAACTTGTTGAAAGTGAGTACTTCTCTTGCTCGATGGGACCAACTATTGCAGGAGAAATTGGTGTATATGGTTATAGACCTTCAGTTCTGATGGATATGCTTGCGGGTAAGAGGGCTGAAGTCAGCACAAAGCTTGGAGCATACACAAGAACCTTTGCTGGTGATTGTTCACCCTCAGACTTAGAAACTGCCTTGCAGCTTGTTTATCAACTATTTACCACACATGTAACACCAGGAGAAGAAGATGTCAAAATAGTGATGCAAATGGCAGAAGAAATGGTCCGTAATCAAGACAGGGATCCTTATGCTGCATTTGCGAATCGTGTGAAGGAGCTAAACTATGGGAACTCCTATTTCTTTAGGCCTACCAGACTAAGAGATCTTCAGAAAGTTGATCCAATGAAAGCTTGTGAATATTTCAACAAATGTTTCAAGGATCCATCAACTTTCTCTATGGTCATTGTTGGGAATATCGATCCTTCTATAGCAGTTCCTTTAATATTGCAATACTTGGGCGGAATACCAAAGCCTCCAGAACCTCTCATGCAATATAACCGCGATGACCTGACAGGACTGCCATTCACTTTTCCAAAGACCATAATAAGAGAAGTGGTACGCAGCCCTATGGTGGAAGAACAATGTTCTGTCCAGCTTTGCTTTCCTGTGGAGCTGAATAATGGAACCATGGTAGAAGATATTCACCTTGTTGGTTTCCTGAGCAAACTTCTTGAAACAAAAATAATGCAGGTTCTCCGGTTCAAGCATGGACAGATCTACACTGTGGGCGTTTCAGTATTTCTAGGCGGTAATAAGCCTTCCAGAACTGCTAATGTTCGTGGAGATATAAGCATAAATTTTTCTTGTGATCCAGAAATTTCCTCGAAGCTGGTCGATCTTACTTTGGATGAAATATTACGTCTTCAAGAGGAAGGGCCTTCAACTGAGGATGTCTCAACCGTCCTTGAAATTGAGCAAAGAGCCCATGAAAATGGGATTCAGGAGAATTACTACTGGCTGGAGAGGATTTTACACAGCTACCAGTCAAGGATATACTCTGGCGATGTCGGCACTTGTTTTGAGACTCAAGAGGAAGGTCGGTTAAAAGTTAGACAATCTCTGACCCCAGGAACAGCGCAGTTAGCATTACAAAACATACTACCTTATCCTTGTAAAAAGCAGTACACTGTAGTAATCTTAATGCCCCGTACTTCTCGCTTTAAGTTACTGCATTCATTCTTTCGATCTACGACCAGCTTTGGTAGAGATGCCAAGATTTTAGCCGGGCTTGCTGGTCTCACAGTTTTGGGTCTTAGCTTGTGGAGACGTTCACGAAGTGCGCACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PITH Peptidase_M16 Peptidase_M16_C

Protein Analysis

1007

Amino Acids

113.13

Weight (kDa)

5.43

Isoelectric Point (pI)

43.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_M16_C	PF05193	43 - 224	3.9e-16	Peptidase M16 inactive domain
Peptidase_M16_C	PF05193	529 - 712	3e-19	Peptidase M16 inactive domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005500)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G56730
fragaria_vesca	FvH4_1g06790 FvH4_1g06790 FvH4_1g06790 FvH4_1g06790 FvH4_1g06790
malus_domestica	MD15G1202300.v1.1
prunus_persica	Prupe.7G214900_v2.0.a1
pyrus_communis	pycom02g05670 pycom15g17970
rosa_chinensis	RchiOBHm_Chr2g0091871 RchiOBHm_Chr2g0091891 RchiOBHm_Chr2g0092561
rosa_laevigata	RLG00000016323
rosa_multiflora	Rmu_sc0004296.1_g000004 Rmu_sc0010910.1_g000005
rosa_roxburghii	Rroxscaffold_2G00148970
rosa_rugosa	Rorug02G0027600
rosa_samantha	Rh2AG066800 Rh2AG067000 Rh2AG073400 Rh2BG066000 Rh2BG074300 Rh2CG067400 Rh2CG075400 Rh2DG065700 Rh2DG072500
rosa_wichuraiana	Rw2G005420 Rw2G005950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	362
Acc16I	TGCGCA	1 cut(s)	3015
Acc36I	ACCTGC	1 cut(s)	2413
Acc65I	GGTACC	1 cut(s)	666
AccB1I	GGYRCC	1 cut(s)	666
AccB7I	CCANNNNNTGG	2 cut(s)	91, 1568
AccI	GTMKAC	1 cut(s)	1157
AccII	CGCG	2 cut(s)	1019, 2235
AciI	CCGC	9 cut(s)	353, 765, 1017, 1019, 1126, 1781, 2193, 2233, 2481
AclI	AACGTT	1 cut(s)	72
AclWI	GGATC	8 cut(s)	983, 1970, 1983, 2066, 2108, 2121, 2147, 2537
AcoI	YGGCCR	1 cut(s)	570
AcsI	RAATTY	6 cut(s)	332, 443, 759, 1346, 2530, 2550
AcuI	CTGAAG	4 cut(s)	80, 1743, 1815, 2045
AcyI	GRCGYC	1 cut(s)	359
AdeI	CACNNNGTG	1 cut(s)	3011
AfaI	GTAC	8 cut(s)	287, 512, 668, 1621, 1697, 2292, 2858, 2884
AfeI	AGCGCT	1 cut(s)	593
AfiI	CCNNNNNNNGG	8 cut(s)	51, 91, 352, 1125, 1277, 1532, 1568, 2305
AflIII	ACRYGT	1 cut(s)	1900
AjnI	CCWGG	4 cut(s)	1118, 1531, 1909, 2800
AjuI	GAANNNNNNNTTGG	2 cut(s)	1260, 1292
AloI	GAACNNNNNNTCC	2 cut(s)	616, 648
Alw21I	GWGCWC	3 cut(s)	781, 897, 1456
Alw26I	GTCTC	8 cut(s)	90, 465, 469, 632, 2632, 2750, 2975, 2992
Alw44I	GTGCAC	1 cut(s)	777
AlwI	GGATC	8 cut(s)	983, 1970, 1983, 2066, 2108, 2121, 2147, 2537
Aor51HI	AGCGCT	1 cut(s)	593
AoxI	GGCC	4 cut(s)	570, 1089, 2039, 2609
ApaLI	GTGCAC	1 cut(s)	777
ApeKI	GCWGC	7 cut(s)	182, 1331, 1374, 1546, 1873, 1985, 2295
ApoI	RAATTY	6 cut(s)	332, 443, 759, 1346, 2530, 2550
Asp700I	GAANNNNTTC	5 cut(s)	628, 1474, 1497, 1584, 2373
Asp718I	GGTACC	1 cut(s)	666
AspLEI	GCGC	3 cut(s)	594, 2812, 3016
AspS9I	GGNCC	5 cut(s)	82, 1090, 1715, 1957, 2609
AsuC2I	CCSGG	4 cut(s)	15, 46, 853, 2959
AsuHPI	GGTGA	6 cut(s)	46, 79, 367, 1839, 1850, 2369
AsuII	TTCGAA	1 cut(s)	622
AvaII	GGWCC	3 cut(s)	82, 1715, 1957
BaeGI	GKGCMC	1 cut(s)	781
BamHI	GGATCC	2 cut(s)	1975, 2113
BanI	GGYRCC	1 cut(s)	666
BanII	GRGCYC	2 cut(s)	897, 2659
BarI	GAAGNNNNNNTAC	2 cut(s)	2476, 2508
BauI	CACGAG	1 cut(s)	1401
BbsI	GAAGAC	2 cut(s)	1313, 2588
Bbv12I	GWGCWC	3 cut(s)	781, 897, 1456
BbvI	GCAGC	7 cut(s)	194, 1343, 1386, 1558, 1885, 1972, 2307
BccI	CCATC	5 cut(s)	562, 811, 1705, 1762, 2125
BciT130I	CCWGG	4 cut(s)	1120, 1533, 1911, 2802
BclI	TGATCA	2 cut(s)	1210, 1636
BcnI	CCSGG	4 cut(s)	15, 46, 853, 2959
BcoDI	GTCTC	8 cut(s)	90, 465, 469, 632, 2632, 2750, 2975, 2992
BfaI	CTAG	3 cut(s)	1094, 1227, 2477
BfmI	CTRYAG	6 cut(s)	696, 858, 913, 1158, 2160, 2862
BfoI	RGCGCY	1 cut(s)	595
BfuAI	ACCTGC	1 cut(s)	2413
BglII	AGATCT	2 cut(s)	2056, 2448
BisI	GCNGC	8 cut(s)	183, 1127, 1332, 1375, 1547, 1874, 1986, 2296
BlpI	GCTNAGC	1 cut(s)	588
BlsI	GCNGC	8 cut(s)	184, 1128, 1333, 1376, 1548, 1875, 1987, 2297
BmcAI	AGTACT	1 cut(s)	1697
Bme1390I	CCNGG	8 cut(s)	15, 46, 853, 1120, 1533, 1911, 2802, 2959
Bme18I	GGWCC	3 cut(s)	82, 1715, 1957
BmgT120I	GGNCC	5 cut(s)	82, 1090, 1715, 1957, 2609
BmiI	GGNNCC	5 cut(s)	668, 1716, 1977, 2115, 2359
BmrFI	CCNGG	8 cut(s)	15, 46, 853, 1120, 1533, 1911, 2802, 2959
BmsI	GCATC	6 cut(s)	268, 531, 538, 1092, 1926, 2932
BoxI	GACNNNNGTC	1 cut(s)	135
BpiI	GAAGAC	2 cut(s)	1313, 2588
BplI	GAGNNNNNCTC	6 cut(s)	171, 203, 1685, 1717, 2612, 2644
BpmI	CTGGAG	4 cut(s)	867, 1286, 2193, 2714
Bpu10I	CCTNAGC	2 cut(s)	771, 2393
Bpu1102I	GCTNAGC	1 cut(s)	588
Bpu14I	TTCGAA	1 cut(s)	622
BpuEI	CTTGAG	4 cut(s)	335, 451, 1478, 2745
BpuMI	CCSGG	4 cut(s)	15, 46, 853, 2959
Bsa29I	ATCGAT	1 cut(s)	2151
BsaHI	GRCGYC	1 cut(s)	359
BsaI	GGTCTC	1 cut(s)	2975
BsaJI	CCNNGG	6 cut(s)	1017, 1119, 1481, 1532, 2361, 2800
BsaWI	WCCGGW	1 cut(s)	2430
BsaXI	ACNNNNNCTCC	2 cut(s)	616, 646
Bsc4I	CCNNNNNNNGG	8 cut(s)	51, 91, 352, 1125, 1277, 1532, 1568, 2305
Bse118I	RCCGGY	1 cut(s)	572
Bse1I	ACTGG	3 cut(s)	930, 2693, 2716
Bse3DI	GCAATG	1 cut(s)	1556
BseBI	CCWGG	4 cut(s)	1120, 1533, 1911, 2802
BseCI	ATCGAT	1 cut(s)	2151
BseDI	CCNNGG	6 cut(s)	1017, 1119, 1481, 1532, 2361, 2800
BseGI	GGATG	6 cut(s)	546, 553, 1027, 1492, 2587, 2629
BseLI	CCNNNNNNNGG	8 cut(s)	51, 91, 352, 1125, 1277, 1532, 1568, 2305
BseMI	GCAATG	1 cut(s)	1556
BseNI	ACTGG	3 cut(s)	930, 2693, 2716
BseRI	GAGGAG	2 cut(s)	239, 252
BseSI	GKGCMC	1 cut(s)	781
BseXI	GCAGC	7 cut(s)	194, 1343, 1386, 1558, 1885, 1972, 2307
BsgI	GTGCAG	1 cut(s)	1565
Bsh1236I	CGCG	2 cut(s)	1019, 2235
BshFI	GGCC	4 cut(s)	572, 1091, 2041, 2611
BshNI	GGYRCC	1 cut(s)	666
BshVI	ATCGAT	1 cut(s)	2151
BsiHKAI	GWGCWC	3 cut(s)	781, 897, 1456
BsiSI	CCGG	6 cut(s)	14, 45, 573, 852, 2431, 2958
BslFI	GGGAC	2 cut(s)	923, 1728
BslI	CCNNNNNNNGG	8 cut(s)	51, 91, 352, 1125, 1277, 1532, 1568, 2305
BsmAI	GTCTC	8 cut(s)	90, 465, 469, 632, 2632, 2750, 2975, 2992
BsmBI	CGTCTC	2 cut(s)	465, 2992
BsmFI	GGGAC	2 cut(s)	923, 1728
BsmI	GAATGC	2 cut(s)	355, 2905
BsnI	GGCC	4 cut(s)	572, 1091, 2041, 2611
Bso31I	GGTCTC	1 cut(s)	2975
Bsp119I	TTCGAA	1 cut(s)	622
Bsp1286I	GDGCHC	4 cut(s)	781, 897, 1456, 2659
Bsp1720I	GCTNAGC	1 cut(s)	588
Bsp19I	CCATGG	2 cut(s)	1481, 2361
BspACI	CCGC	9 cut(s)	353, 765, 1017, 1019, 1126, 1781, 2193, 2233, 2481
BspANI	GGCC	4 cut(s)	572, 1091, 2041, 2611
BspDI	ATCGAT	1 cut(s)	2151
BspFNI	CGCG	2 cut(s)	1019, 2235
BspHI	TCATGA	2 cut(s)	295, 808
BspLI	GGNNCC	5 cut(s)	668, 1716, 1977, 2115, 2359
BspMAI	CTGCAG	1 cut(s)	862
BspMI	ACCTGC	1 cut(s)	2413
BspPI	GGATC	8 cut(s)	983, 1970, 1983, 2066, 2108, 2121, 2147, 2537
BspQI	GCTCTTC	1 cut(s)	807
BspT104I	TTCGAA	1 cut(s)	622
BspT107I	GGYRCC	1 cut(s)	666
BspTNI	GGTCTC	1 cut(s)	2975
BsrDI	GCAATG	1 cut(s)	1556
BsrFI	RCCGGY	1 cut(s)	572
BsrI	ACTGG	3 cut(s)	930, 2693, 2716
BssAI	RCCGGY	1 cut(s)	572
BssECI	CCNNGG	6 cut(s)	1017, 1119, 1481, 1532, 2361, 2800
BssNI	GRCGYC	1 cut(s)	359
BssSI	CACGAG	1 cut(s)	1401
BssT1I	CCWWGG	2 cut(s)	1481, 2361
Bst2BI	CACGAG	1 cut(s)	1401
Bst2UI	CCWGG	4 cut(s)	1120, 1533, 1911, 2802
Bst4CI	ACNGT	9 cut(s)	376, 628, 643, 904, 1162, 2458, 2635, 2863, 2977
Bst6I	CTCTTC	3 cut(s)	216, 501, 807
BstACI	GRCGYC	1 cut(s)	359
BstBI	TTCGAA	1 cut(s)	622
BstC8I	GCNNGC	5 cut(s)	343, 777, 1232, 1779, 2964
BstDSI	CCRYGG	3 cut(s)	1017, 1481, 2361
BstENI	CCTNNNNNAGG	1 cut(s)	1530
BstF5I	GGATG	6 cut(s)	546, 553, 1027, 1492, 2587, 2629
BstFNI	CGCG	2 cut(s)	1019, 2235
BstH2I	RGCGCY	1 cut(s)	595
BstHHI	GCGC	3 cut(s)	594, 2812, 3016
BstMAI	GTCTC	8 cut(s)	90, 465, 469, 632, 2632, 2750, 2975, 2992
BstMWI	GCNNNNNNNGC	7 cut(s)	188, 272, 692, 1991, 2742, 2816, 2963
BstNI	CCWGG	4 cut(s)	1120, 1533, 1911, 2802
BstNSI	RCATGY	1 cut(s)	1904
BstPAI	GACNNNNGTC	1 cut(s)	135
BstSCI	CCNGG	8 cut(s)	13, 44, 851, 1118, 1531, 1909, 2800, 2957
BstSFI	CTRYAG	6 cut(s)	696, 858, 913, 1158, 2160, 2862
BstSLI	GKGCMC	1 cut(s)	781
BstUI	CGCG	2 cut(s)	1019, 2235
BstV1I	GCAGC	7 cut(s)	194, 1343, 1386, 1558, 1885, 1972, 2307
BstV2I	GAAGAC	2 cut(s)	1313, 2588
BstX2I	RGATCY	5 cut(s)	988, 1975, 2056, 2113, 2448
BstXI	CCANNNNNNTGG	1 cut(s)	2666
BstYI	RGATCY	5 cut(s)	988, 1975, 2056, 2113, 2448
Bsu15I	ATCGAT	1 cut(s)	2151
BsuRI	GGCC	4 cut(s)	572, 1091, 2041, 2611
BsuTUI	ATCGAT	1 cut(s)	2151
BtgI	CCRYGG	3 cut(s)	1017, 1481, 2361
BtgZI	GCGATG	2 cut(s)	2250, 2751
BtsCI	GGATG	6 cut(s)	546, 553, 1027, 1492, 2587, 2629
BtsI	GCAGTG	2 cut(s)	693, 867
BtsIMutI	CAGTG	8 cut(s)	56, 277, 372, 693, 867, 1456, 2454, 2859
BveI	ACCTGC	1 cut(s)	2413
Cac8I	GCNNGC	5 cut(s)	343, 777, 1232, 1779, 2964
CciI	TCATGA	2 cut(s)	295, 808
CfoI	GCGC	3 cut(s)	594, 2812, 3016
Cfr10I	RCCGGY	1 cut(s)	572
Cfr13I	GGNCC	5 cut(s)	82, 1090, 1715, 1957, 2609
Cfr42I	CCGCGG	1 cut(s)	1020
ClaI	ATCGAT	1 cut(s)	2151
Csp6I	GTAC	8 cut(s)	286, 511, 667, 1620, 1696, 2291, 2857, 2883
CviQI	GTAC	8 cut(s)	286, 511, 667, 1620, 1696, 2291, 2857, 2883
DraI	TTTAAA	1 cut(s)	970
DraIII	CACNNNGTG	1 cut(s)	3011
EaeI	YGGCCR	1 cut(s)	570
Eam1104I	CTCTTC	3 cut(s)	216, 501, 807
EarI	CTCTTC	3 cut(s)	216, 501, 807
EciI	GGCGGA	1 cut(s)	2208
Ecl136II	GAGCTC	1 cut(s)	895
Eco130I	CCWWGG	2 cut(s)	1481, 2361
Eco147I	AGGCCT	1 cut(s)	2041
Eco24I	GRGCYC	2 cut(s)	897, 2659
Eco31I	GGTCTC	1 cut(s)	2975
Eco32I	GATATC	1 cut(s)	1341
Eco47I	GGWCC	3 cut(s)	82, 1715, 1957
Eco47III	AGCGCT	1 cut(s)	593
Eco53kI	GAGCTC	1 cut(s)	895
Eco57I	CTGAAG	4 cut(s)	80, 1743, 1815, 2045
EcoICRI	GAGCTC	1 cut(s)	895
EcoNI	CCTNNNNNAGG	1 cut(s)	1530
EcoO109I	RGGNCCY	2 cut(s)	1090, 2609
EcoRI	GAATTC	1 cut(s)	443
EcoRII	CCWGG	4 cut(s)	1118, 1531, 1909, 2800
EcoRV	GATATC	1 cut(s)	1341
EcoT14I	CCWWGG	2 cut(s)	1481, 2361
EcoT38I	GRGCYC	2 cut(s)	897, 2659
ErhI	CCWWGG	2 cut(s)	1481, 2361
Esp3I	CGTCTC	2 cut(s)	465, 2992
FaqI	GGGAC	2 cut(s)	923, 1728
FauI	CCCGC	1 cut(s)	1774
FauNDI	CATATG	1 cut(s)	1663
FbaI	TGATCA	2 cut(s)	1210, 1636
FblI	GTMKAC	1 cut(s)	1157
Fnu4HI	GCNGC	8 cut(s)	183, 1127, 1332, 1375, 1547, 1874, 1986, 2296
FokI	GGATG	6 cut(s)	553, 560, 1034, 1499, 2594, 2636
FriOI	GRGCYC	2 cut(s)	897, 2659
Fsp4HI	GCNGC	8 cut(s)	183, 1127, 1332, 1375, 1547, 1874, 1986, 2296
FspAI	RTGCGCAY	1 cut(s)	3015
FspBI	CTAG	3 cut(s)	1094, 1227, 2477
FspI	TGCGCA	1 cut(s)	3015
GlaI	GCGC	3 cut(s)	593, 2811, 3015
GluI	GCNGC	8 cut(s)	183, 1127, 1332, 1375, 1547, 1874, 1986, 2296
GsuI	CTGGAG	4 cut(s)	867, 1286, 2193, 2714
HaeII	RGCGCY	1 cut(s)	595
HaeIII	GGCC	4 cut(s)	572, 1091, 2041, 2611
HapII	CCGG	6 cut(s)	14, 45, 573, 852, 2431, 2958
HhaI	GCGC	3 cut(s)	594, 2812, 3016
Hin1I	GRCGYC	1 cut(s)	359
Hin6I	GCGC	3 cut(s)	592, 2810, 3014
HinP1I	GCGC	3 cut(s)	592, 2810, 3014
HincII	GTYRAC	3 cut(s)	115, 400, 1224
HindII	GTYRAC	3 cut(s)	115, 400, 1224
HindIII	AAGCTT	2 cut(s)	1808, 2082
HpaII	CCGG	6 cut(s)	14, 45, 573, 852, 2431, 2958
HphI	GGTGA	6 cut(s)	46, 79, 367, 1839, 1850, 2369
HpyCH4III	ACNGT	9 cut(s)	376, 628, 643, 904, 1162, 2458, 2635, 2863, 2977
HpyCH4IV	ACGT	6 cut(s)	72, 359, 820, 1207, 2593, 3001
HpyF10VI	GCNNNNNNNGC	7 cut(s)	188, 272, 692, 1991, 2742, 2816, 2963
HpySE526I	ACGT	6 cut(s)	72, 359, 820, 1207, 2593, 3001
Hsp92I	GRCGYC	1 cut(s)	359
HspAI	GCGC	3 cut(s)	592, 2810, 3014
KpnI	GGTACC	1 cut(s)	670
Ksp22I	TGATCA	2 cut(s)	1210, 1636
KspI	CCGCGG	1 cut(s)	1020
LguI	GCTCTTC	1 cut(s)	807
LmnI	GCTCC	4 cut(s)	1571, 1814, 2008, 2344
Lsp1109I	GCAGC	7 cut(s)	194, 1343, 1386, 1558, 1885, 1972, 2307
LweI	GCATC	6 cut(s)	268, 531, 538, 1092, 1926, 2932
MaeI	CTAG	3 cut(s)	1094, 1227, 2477
MaeII	ACGT	6 cut(s)	72, 359, 820, 1207, 2593, 3001
MaeIII	GTNAC	5 cut(s)	54, 355, 1359, 1903, 2898
MfeI	CAATTG	1 cut(s)	1392
MflI	RGATCY	5 cut(s)	988, 1975, 2056, 2113, 2448
MhlI	GDGCHC	4 cut(s)	781, 897, 1456, 2659
MlyI	GAGTC	4 cut(s)	874, 941, 1106, 2752
MroXI	GAANNNNTTC	5 cut(s)	628, 1474, 1497, 1584, 2373
MseI	TTAA	9 cut(s)	201, 674, 969, 1032, 1386, 2174, 2777, 2873, 2895
MslI	CAYNNNNRTG	1 cut(s)	2664
MspA1I	CMGCKG	3 cut(s)	887, 1019, 1377
MspI	CCGG	6 cut(s)	14, 45, 573, 852, 2431, 2958
MspR9I	CCNGG	8 cut(s)	15, 46, 853, 1120, 1533, 1911, 2802, 2959
MunI	CAATTG	1 cut(s)	1392
Mva1269I	GAATGC	2 cut(s)	355, 2905
MvaI	CCWGG	4 cut(s)	1120, 1533, 1911, 2802
MvnI	CGCG	2 cut(s)	1019, 2235
MwoI	GCNNNNNNNGC	7 cut(s)	188, 272, 692, 1991, 2742, 2816, 2963
NciI	CCSGG	4 cut(s)	15, 46, 853, 2959
NcoI	CCATGG	2 cut(s)	1481, 2361
NdeI	CATATG	1 cut(s)	1663
NlaIV	GGNNCC	5 cut(s)	668, 1716, 1977, 2115, 2359
NmuCI	GTSAC	2 cut(s)	54, 355
NsbI	TGCGCA	1 cut(s)	3015
NspI	RCATGY	1 cut(s)	1904
NspV	TTCGAA	1 cut(s)	622
PagI	TCATGA	2 cut(s)	295, 808
PceI	AGGCCT	1 cut(s)	2041
PciI	ACATGT	1 cut(s)	1900
PciSI	GCTCTTC	1 cut(s)	807
PctI	GAATGC	2 cut(s)	355, 2905
PdmI	GAANNNNTTC	5 cut(s)	628, 1474, 1497, 1584, 2373
PfeI	GAWTC	9 cut(s)	457, 520, 742, 839, 1084, 1190, 1470, 1996, 2671
PflMI	CCANNNNNTGG	2 cut(s)	91, 1568
PfoI	TCCNGGA	1 cut(s)	13
PkrI	GCNGC	8 cut(s)	184, 1128, 1333, 1376, 1548, 1875, 1987, 2297
PleI	GAGTC	4 cut(s)	874, 940, 1105, 2752
PpsI	GAGTC	4 cut(s)	874, 940, 1105, 2752
PscI	ACATGT	1 cut(s)	1900
PshAI	GACNNNNGTC	1 cut(s)	135
Psp124BI	GAGCTC	1 cut(s)	897
Psp1406I	AACGTT	1 cut(s)	72
Psp6I	CCWGG	4 cut(s)	1118, 1531, 1909, 2800
PspGI	CCWGG	4 cut(s)	1118, 1531, 1909, 2800
PspN4I	GGNNCC	5 cut(s)	668, 1716, 1977, 2115, 2359
PspPI	GGNCC	5 cut(s)	82, 1090, 1715, 1957, 2609
PstI	CTGCAG	1 cut(s)	862
PsuI	RGATCY	5 cut(s)	988, 1975, 2056, 2113, 2448
PvuII	CAGCTG	2 cut(s)	887, 1377
RsaI	GTAC	8 cut(s)	287, 512, 668, 1621, 1697, 2292, 2858, 2884
RsaNI	GTAC	8 cut(s)	286, 511, 667, 1620, 1696, 2291, 2857, 2883
RseI	CAYNNNNRTG	1 cut(s)	2664
SacI	GAGCTC	1 cut(s)	897
SacII	CCGCGG	1 cut(s)	1020
SapI	GCTCTTC	1 cut(s)	807
SaqAI	TTAA	9 cut(s)	201, 674, 969, 1032, 1386, 2174, 2777, 2873, 2895
SatI	GCNGC	8 cut(s)	183, 1127, 1332, 1375, 1547, 1874, 1986, 2296
Sau96I	GGNCC	5 cut(s)	82, 1090, 1715, 1957, 2609
ScaI	AGTACT	1 cut(s)	1697
SchI	GAGTC	4 cut(s)	874, 941, 1106, 2752
ScrFI	CCNGG	8 cut(s)	15, 46, 853, 1120, 1533, 1911, 2802, 2959
SduI	GDGCHC	4 cut(s)	781, 897, 1456, 2659
SfaNI	GCATC	6 cut(s)	268, 531, 538, 1092, 1926, 2932
SfcI	CTRYAG	6 cut(s)	696, 858, 913, 1158, 2160, 2862
Sfr303I	CCGCGG	1 cut(s)	1020
SfuI	TTCGAA	1 cut(s)	622
SgrBI	CCGCGG	1 cut(s)	1020
SinI	GGWCC	3 cut(s)	82, 1715, 1957
SmiMI	CAYNNNNRTG	1 cut(s)	2664
SmlI	CTYRAG	4 cut(s)	314, 466, 1457, 2760
SmoI	CTYRAG	4 cut(s)	314, 466, 1457, 2760
SseBI	AGGCCT	1 cut(s)	2041
SsiI	CCGC	9 cut(s)	353, 765, 1017, 1019, 1126, 1781, 2193, 2233, 2481
SspI	AATATT	5 cut(s)	1244, 1567, 2093, 2178, 2589
SspMI	CTAG	3 cut(s)	1094, 1227, 2477
SstI	GAGCTC	1 cut(s)	897
StuI	AGGCCT	1 cut(s)	2041
StyD4I	CCNGG	8 cut(s)	13, 44, 851, 1118, 1531, 1909, 2800, 2957
StyI	CCWWGG	2 cut(s)	1481, 2361
TaaI	ACNGT	9 cut(s)	376, 628, 643, 904, 1162, 2458, 2635, 2863, 2977
TaiI	ACGT	6 cut(s)	75, 362, 823, 1210, 2596, 3004
TatI	WGTACW	5 cut(s)	285, 510, 1619, 1695, 2856
TauI	GCSGC	1 cut(s)	1129
TfiI	GAWTC	9 cut(s)	457, 520, 742, 839, 1084, 1190, 1470, 1996, 2671
Tru1I	TTAA	9 cut(s)	201, 674, 969, 1032, 1386, 2174, 2777, 2873, 2895
Tru9I	TTAA	9 cut(s)	201, 674, 969, 1032, 1386, 2174, 2777, 2873, 2895
TscAI	CASTG	8 cut(s)	63, 277, 379, 693, 867, 1456, 2461, 2866
TseFI	GTSAC	2 cut(s)	54, 355
TseI	GCWGC	7 cut(s)	182, 1331, 1374, 1546, 1873, 1985, 2295
Tsp45I	GTSAC	2 cut(s)	54, 355
TspGWI	ACGGA	2 cut(s)	1250, 1949
TspRI	CASTG	8 cut(s)	63, 277, 379, 693, 867, 1456, 2461, 2866
Van91I	CCANNNNNTGG	2 cut(s)	91, 1568
VneI	GTGCAC	1 cut(s)	777
VpaK11BI	GGWCC	3 cut(s)	82, 1715, 1957
XagI	CCTNNNNNAGG	1 cut(s)	1530
XapI	RAATTY	6 cut(s)	332, 443, 759, 1346, 2530, 2550
XceI	RCATGY	1 cut(s)	1904
XmiI	GTMKAC	1 cut(s)	1157
XmnI	GAANNNNTTC	5 cut(s)	628, 1474, 1497, 1584, 2373
XspI	CTAG	3 cut(s)	1094, 1227, 2477
ZraI	GACGTC	1 cut(s)	360
ZrmI	AGTACT	1 cut(s)	1697

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.